Terrestrial and Aquatic Ecology Commons^™

Impacts Of Shoreline Restoration And Source Of Nutrient Enrichment On Macrophytes And Epiphytic Algal Communities, Paige Marie Kleindl

Masters Theses

Macrophytes and their epiphytic algal communities are integral for optimizing littoral ecosystem functioning in lakes. Epiphytic algae’s placement on the plant’s surface can reduce light and nutrient availability (i.e., nitrogen and phosphorus) for the host macrophyte. Macrophyte and epiphytic algal proximity complicates these primary producer group interactions and responses to bioavailable nutrients in the water column or porewater. For example, epiphytic algae may have a competitive advantage over surface water nutrients compared to macrophytes, which may have a competitive advantage over porewater nutrients via root systems.

Muskegon Lake’s industrial history and designation as an Area of Concern prompted shoreline restoration, …

Habitat Use And Tributary Occupancy Of The Threatened River Redhorse (Moxostoma Carinatum) In The Grand River, Mi, Usa., Nicholas Michael Preville

Masters Theses

The resiliency of our aquatic ecosystems hinges on our ability to protect the native species that reside within them. The river redhorse (Moxostoma carinatum) is one such example and populations have become low enough to warrant listing by the State of Michigan. Causes of decline include overfishing, habitat alteration, and lack of knowledge of basic life-history attributes including their use of non-spawning habitat and spawning locations. In order to understand the river redhorse’s habitat use we implanted 15 individuals with radio transmitters and tracked their locations over the course of a summer. Tagged river redhorse were found to …

An Assessment Of Periphyton Communities In Five Upper Peninsula Streams, Mi, Aaron Jeffrey Christiansen

Masters Theses

This project quantified lotic periphyton community change from May 2018-October 2018 in five, first and second-order Lake Superior tributary streams. Using periphyton communities, land use, geology, and abiotic factors pertinent to stream ecosystems we evaluated periphyton community succession. Using periphytometers, periphyton communities were collected and identified monthly to quantify community succession. Total phosphorus and total Kjeldahl nitrogen were measured monthly during the study. Depth, velocity, specific conductivity, and canopy cover were measured to quantify some of the physical factors within the streams. Nonmetric multidimensional scaling analysis indicated that the periphyton communities were similar between streams (ADONIS p-value =0.73) but was …

Dynamic Carbon Cycling In Muskegon Lake – A Great Lakes Estuary, Katie Lynn Knapp

Masters Theses

Ecosystem metabolism is the coupling of carbon and oxygen through photosynthesis and respiration. Gross primary production (GPP) is the carbon fixation by photosynthesis, ecosystem respiration (R) is carbon remineralization by bacterial and plankton respiration, and net ecosystem production (NEP) is the balance. Metabolism estimates determine if ecosystem is a sink or source of carbon to the atmosphere. When a lake has a positive NEP, or the GPP:R ratio is greater than 1, it is considered autotrophic and less carbon is being lost to the atmosphere than taken in, whereas if NEP is negative (GPP:R-1d^-1, respectively and the BOD …

The Association Between Dietary Niche Variation In Rodents And Climate Change Across The Paleocene-Eocene Thermal Maximum, Hannah K. Vermeer

Masters Theses

Mammalian teeth play a crucial role in food acquisition and breakdown and are therefore closely tied to dietary niche. This study reconstructed the diet of early Paleogene paramyid rodents across the Paleocene-Eocene Thermal Maximum (PETM) climatic event in an effort to understand the role of climate in mammalian dietary niche change. Dietary niches were quantified using three dental topographic measures: Dirichlet normal energy, relief index, and orientation patch count rotated. A Kruskal-Wallis test was conducted over eight time periods to determine if each of the dental topographic measures (i.e., diet) varied over time. Regression analysis of these measures with climatic …

Using Landscape Genetics To Understand Connectivity Of An Island Population Of Eastern Massasauga Rattlesnakes (Sistrurus Catenatus), Nathan Kudla

Masters Theses

Populations that experience low levels of gene flow commonly display increased levels of inbreeding, lower genetic diversity, and reduced adaptive potential. Landscape genetics allows for spatial and genetic information to be analyzed simultaneously to better understand how the landscape influences gene flow. The eastern massasauga rattlesnake (Sistrurus catenatus) is a federally threatened viper found in wetlands throughout the Great Lakes region. Many remaining populations are small and isolated due primarily to habitat loss. Atypical from a range-wide perspective, eastern massasaugas on Bois Blanc Island (BBI), Michigan live in a relatively undisturbed landscape with a potential for high connectivity …

Evaluating Remote Site Incubators To Support Restoration Of Arctic Grayling In Michigan, Alan J. Mock

Masters Theses

Remote site incubators (RSIs) have been used to rear salmonid fish eggs along streams in the Pacific Northwest since the 1980s. Recently, the successful use of RSIs for Arctic Grayling Thymallus arcticus restoration in Montana has sparked a renewed interest to reestablish the species in Michigan. To support future reintroduction efforts of Arctic Grayling in Michigan, I evaluated RSIs in three Michigan streams during 2018 and 2019 using Rainbow Trout Oncorhynchus mykiss eggs (as surrogates for Arctic Grayling). My objectives were to: (1) compare hatching success between two different RSI designs (19-L vs. 265-L RSIs), and (2) test whether the …

Assessment And Recovery Of Stream Restoration Efforts On Fish Communities, Jessica Marie Rohr

Masters Theses

Aquatic systems are subjected to disturbances of various types, including natural and anthropogenic, or can deteriorate due to accumulating unfavorable conditions, including receding banks, decreasing riparian vegetation, and disrupted flow patterns. An analysis was done on a variety of streams in central Illinois that experienced one or multiple anthropogenic disturbances without remediation to determine the natural recovery dynamics of each system. A separate analysis was performed on a multi-site restored stream with a complex restoration project with a variety of restoration methods. This data were collected over at periods of time spanning from 5-15 years, including time prior to disturbance/restoration …

Impact Of Temperature Increase On Freshwater Fish Species: Energetics And Muscle Mechanics Of Two Centrarchids, Israt Jahan

Masters Theses

Fishes have evolved physiologically to live within a specific range of environmental variation and existence outside of that range can be stressful or fatal. These ranges can coincide for fishes that evolved in similar habitats. This study investigates physiological processes limiting thermal tolerance, specifically how changes in water temperature affect the swimming energetics and muscle mechanics in largemouth bass (Micropterus salmoides) and bluegill (Lepomis macrochirus). I focused on the impact of temperature change at the muscle level in these two species and the capacity to adapt to rapid changes in the environment. Fish were housed at …

The North American River Otter (Lontra Canadensis) On The Department Of Energy's Savannah River Site, Emily B. Mccallen

Masters Theses

The Department of Energy's (DOE) Savannah River Site (SRS) faces a legacy of radionuclide and metal contamination from industrial processes that occurred within the site. The risks posed to ecosystems on the site from contaminants are quantified using the ecological risk assessment process, which often uses the health of a particular species as an ecological endpoint. Northern river otters (Lontra canadensis) are appropriate receptors for studying the effects of long-term, low-level contamination because they are long-lived, higher trophic level organisms likely to accumulate high levels of pollutants. However, little information about river otters on the SRS is known; …

Effects Of Habitat Alteration On Ecomorphology Of Fish Communities In A Restored Stream, Carl Anthony Favata

Masters Theses

Decades of anthropogenic pressure have devastated lotic ecosystems across the riverscapes of North America, resulting in degradation of critical habitat and contributing to sharp declines in biotic integrity. In response, local stream restoration projects have increased in frequency. However, little effort has been allocated to monitoring and project success has been limited. In addition, restoration projects typically focus on ecological effects above the population-level, while relationships with physiological processes are seldom assessed. Lessons from the long-term restoration and ecological monitoring of Kickapoo Creek highlight some of the complex dynamics driving reach-scale restoration projects. Following instream restoration, I predicted that alterations …

Successional Changes In Leaf Nutrient Concentrations Of Woody And Herbaceous Species, Daniel Walter Kuchta

Masters Theses

Leaf nutrient concentrations are an example of a functional trait, a trait that can be used to understand community dynamics by observing how plants interact with their environment. I explored how leaf nutrient concentrations were affected over successional time by environmental changes. The majority of prior research on functional traits focuses on either woody or herbaceous species, but not both life forms simultaneously. To address this, I also explored the successional changes to leaf nutrient concentrations, separating the plant community into woody and herbaceous species.

Healthy, mature leaves were taken from 122 taxa of woody and herbaceous species in a …

Low-Head Dams On Habitat, Fish Functional Guilds And Genetic Structuring In A Midwestern River System, Shannon Cassandra Frary Smith

Masters Theses

The natural flow regime of the majority of rivers in the United States has been altered by anthropogenic structures. This loss of connectivity plays a strong role in shaping river ecosystems by altering physical habitat characteristics and shaping fish community assemblages. Although the impacts of large dams on river systems are well documented and often easy to observe, there are fewer studies on the effects of smaller low-head dams. Additionally, the influences of low-head dams on the genetic structuring of small-bodied riverine fishes have yet to be fully explored. I assessed the effects of two low-head dams on the Vermilion …

Stopover Ecology Of Neotropical Migratory Songbirds In The Northern Yucatan Peninsula, Mexico, Lauren E. Solomon

Masters Theses

Chapter I. Full-service hotels, convenience stores or fire escapes? Evaluating function of stopover sites for Neotropical migrants in the northern Yucatan Peninsula

Nearctic-Neotropical migratory songbirds incur the highest mortality rates during their annual migrations. Migratory songbirds use a network of stopover sites to rest, refuel, or seek refuge during times of poor weather conditions; and the time and energy expended at these sites exceeds that of migratory flight. In order to conserve stopover sites with the highest value to Neotropical migrants, a conceptual framework was developed to classify stop over sites into three functional categories based on their function for …

The Functional Role Of Leaf Nutrients In An Old-Field Successional Community, Kirstin I. Duffin

Masters Theses

In functional ecology, traits that capture aspects of plant performance are used to understand how organisms interact with their environment. Leaf nutrients are an example of a functional trait that directly links to plant metabolic processes and therefore may describe plant assemblage dynamics. Multivariate leaf nutrient analyses may be used with other functional traits to understand ecological strategies because they are a direct measure of leaf metabolic processes and can describe nuances in plant allocation patterns. In this thesis, I explored (1) whether a suite of leaf nutrients (carbon, nitrogen, phosphorus, potassium, calcium, and magnesium) was related to plant growth …

Microglia Respond To Both Permanent And Temporary Deaferentation In The Adult Zebrafish Olfactory Bulb, Amanda K. Mckenna

Masters Theses

The major goal of this study was to investigate a microglial response following deafferentation in the adult zebrafish, Danio rerio, olfactory bulb. Microglia were identified in the olfactory bulb using the 4c4 antibody and phagocytic-dependent labeling (DiA). Microglia responded to both methods of deafferentation namely, permanent (cautery) and temporary (Triton X- 100). On one and three days following both permanent and temporary deafferentation there was a significant increase in microglia in the treated olfactory bulb. At five and seven days after permanent and temporary deafferentation there was no longer a significant difference between the treated and untreated olfactory bulbs, …

Do Artificial Riffles Enhance Nutrient Retention In Restored Streams?, Adam Thomas Hughes

Masters Theses

Kickapoo Creek, a tributary of the Embarrass River in Central Illinois, has undergone a stream restoration that included the construction of two artificial riffles. These structures were designed to slow flood waters, increase channel and substrate stability, and increase habitat heterogeneity in a stream impacted by erosion and sediment deposition. They may also provide stable substrates that affect the algal community, leading to shifts in algal community composition, increases in the biomass of primary producers, and subsequent increases in nutrient retention. I explored the effects of the restoration on instream nutrient retention by measuring and comparing phosphate uptake lengths, velocities, …

Habitat Associations Of Larval And Juvenile Fishes In A Large Unimpounded River, Sharon V. Rayford

Masters Theses

Larval and juvenile life stages of fish are numerically the dominant component of fish populations. These early life stages experience high levels of mortality due, in part, to anthropogenic disturbances, but little is known about which habitats they utilize in large-rivers, as they are often difficult to sample and identify. My study examined the larval and juvenile fish assemblages in different habitats within the lower 322 km of the Wabash River. Fish were sampled with a conical-cylindrical ichthyoplankton net (larvae) and a DC-electrified mini-Missouri trawl (juveniles) between May and October 2013. Larval fish were collected every two weeks from mid-May …

Effects Of Dams On Fish And Macroinvertebrate Communities In The Vermilion River, Il, Ryan Patrick Hastings

Masters Theses

Dams are a main source of anthropogenic disturbances on river systems and can affect rivers in a variety of ways. Dams have the ability to change rivers from lotic to lentic habitats, affect sediment transportation, connectivity, water quality, linkages with wetlands and the quality of in-stream and riparian habitats. The Danville Dam was constructed in 1914 on the Vermilion River in Danville, Illinois and is becoming a safety hazard for human recreation on the Vermilion River, resulting in three deaths in the last 10 years. The Illinois Department of Natural Resources in conjunction with the city of Danville has proposed …

Effects Of Instream Habitat Restoration On Macroinvertebrate And Fish Communities In A Small Midwestern Stream, Manisha Pant

Masters Theses

Although millions of dollars are spent annually on stream habitat restoration, the biological responses to these restorations are rarely monitored. I assessed the impact of habitat enhancement on fish and macroinvertebrate abundance and diversity in a small Midwestern stream. Fish and macroinvertebrate communities were sampled annually in two restored and two unrestored sites beginning two years before and continuing four years after restoration. Habitat heterogeneity increased in the restored sites following the restoration, but there were no significant changes in most macroinvertebrate and fish community indices. Macroinvertebrate composition was significantly different between spring and fall, but in general, assemblages within …

Short-Term Responses Of Fish Assemblages To Habitat Restoration In A Small Midwestern Stream, John Leon West

Masters Theses

Recent efforts to restore stream habitat have become a common practice, yet evaluations of biotic responses to these practices are not as common. I evaluated fish assemblage response to restoration in a reach of Kickapoo Creek, a fourth order stream southwest of Charleston, Illinois. Restoration included 446 meters of bank stabilization, pool scouring keys, and the creation of two artificial riffles. To have a representation of pre-restoration fish assemblages, I sampled four stream reaches of Kickapoo Creek twice before construction of habitat restoration: two control reaches (upstream and downstream) and two restored reaches within a 0.5 km restoration stretch (upstream …

Sediment Remediation Impacts On Macroinvertebrate Community Structure: Assessing The Success Of Urban Stream Restoration, Laurie Beth Nederveld

Masters Theses

Land use practices altering the natural landscape have resulted in the widespread degradation of stream ecosystems and the need for urban stream restorations. While a number of studies have evaluated the success of these stream restoration efforts, few have assessed the recovery of macroinvertebrate communities following the remediation of contaminated sediments. The purpose of my study was to evaluate the impact of sediment remediation activities on macroinvertebate abundance, diversity, and richness to determine the success of stream restoration in Ruddiman Creek, a small stream in the Muskegon Lake watershed. During my investigation, macroinvertebrate samples were collected from all available habitat …

Analyses Of Prairie Restorations At Rock Springs Environmental Center, Decatur, Illinois, Jennifer A. Ward

Masters Theses

Rock Springs Environmental Center was acquired in 1969 by the Macon County Conservation District. Several tracts totaling 1.6 hectares were developed as prairie restorations of varying ages on former farmland starting in 1977. During the summers of 1999 to 2001, 123 species were collected at Rock Springs. Of these, 56 species were collected within the sampling transects. The largest number of species (36 out of 56) was collected in the 1983 tract. The highest importance value of all tracts for any species was 42.6 for Andropogon gerardii. Sorensen's Index of Similarity between tracts ranged from 53.97- 72.97. The coefficient …

The Effects Of Habitat Fragmentation On Fish Developmental Stability, Matthew W. Gosses

Masters Theses

In nature, organisms exist in less than ideal conditions making stress a constant factor throughout their life. These stressful environments may disturb developmental processes, causing long-term, detrimental changes to an organism expressed as bilateral variation in morphology or fluctuating asymmetry (FA). Fluctuating asymmetry has been shown to be associated with accidents during morphogenesis due to environmental factors and hence is considered a measure of developmental instability.

One environmental stressor that may affect aquatic organisms is stream habitat fragmentation. Stream habitat fragmentation is the lack of connectivity between upstream and downstream populations or sites. Stream fragmentation can create distinct patches of …

Cyclomorphosis Of Daphnia Lumholtzi In Response To Spatial Heterogeneity In Lake Taylorville, Karen K. Schnake

Masters Theses

Reservoir zonation occurs longitudinally as water enters from a stream into an impoundment. Inflow areas (or riverine zones) are typified by high flow rate and shallow depth whereas areas near the dam (lacustrine zones) characteristically have decreased flow and greater depth. In a typical reservoir, abiotic and biotic variables change somewhat predictably along a continuum from the riverine, through a transitional and into a lacustrine zone which can have a significant affect on the biota. Daphnia lumholtzi, a cladoceran which exhibits extreme cyclomorphosis, is an exotic species introduced to North America within the past twenty-five years. I examined the morphology …

Managing Wetland Vegetation For Marsh Birds And Waterfowl At Carlyle Lake Wildlife Management Area, Il, Matthew W. Bowyer

Masters Theses

The high cost of restoring and managing wetlands warrants careful assessment of their management potential. We designed this study to provide basic information on how seed banks and hydroperiod influence the development of habitat for migratory birds in restored wetlands at Carlyle Lake Wildlife Management Area (CLWMA). The objectives were to: (1) survey the composition of the seed banks; (2) investigate the effects of early- vs. late-drawdowns on the germination and growth of these plants; and (3) monitor the use of these communities by wetland birds during migration and the breeding season. The study was conducted on a marsh complex …

Impacts Of White-Tailed Deer Grazing On Spring Wildflower Communities, Faye Frankland

Masters Theses

High deer densities on state forests and nature preserves throughout Illinois have prompted concerns that deer are impacting the growth, survival, and reproduction of spring-flowering herbaceous plants. I investigated the impacts of white-tailed deer (Odocoileus virginianus) on the herbaceous vegetation, particularly spring wildflowers, at Beall Woods Nature Preserve (BWNP). BWNP was selected as the site for this study because it supports a diverse community of spring wildflowers and a large deer population. The objectives for this study were to: (1) quantify the extent of deer foraging on representative spring-flowering plant species at Beall Woods Nature Preserve, (2) investigate the effects …

Effects Of Leafy Spurge (Euphorbia Esula) Infestation On Breeding Birds Of The Sheyenne National Grassland, Nd, Daniel M. Scheiman

Masters Theses

Leafy spurge (Euphorbia esula) is an exotic invasive weed in the northern Great Plains. We examined the effects of leafy spurge infestation on densities and nest success of breeding birds in grasslands on the Sheyenne National Grassland (SNG), ND. We categorized spurge-infested grasslands into three levels of infestation, based on the area covered by spurge patches: (a) low (0-20%), (b) medium (20-60%) and, (c) high (> 60%). We surveyed 60 100-m radius circular plots (20 in each category), and searched for nests in three 16-ha plots (one in each category). There were no statistically significant differences in mean species richness …

Prairie Analysis At Prairie Ridge State Natural Area, Jasper County, Il, Annette Kessler

Masters Theses

Five restored prairie sites at Prairie Ridge State Natural Area in Jasper County were studied during the growing season of 1998. These sites varied in age from two years to thirty years and in size from 4 acres to 10 acres. Key areas of data recorded were an overall and site specific vascular species lists, phenology of various species, and cover analysis of each site. Frequency cover and importance values of the taxa were determined using randomly located quadrats along line transects. Prairie quality of each site was determined, as well as a similarity index that compared the sites to …

The Role Of Bowfin, Amia Calva, In Multiple Species Management Plans, Benjamin Jacob Hausmann

Masters Theses

The major challenge to fisheries managers of the 21st century will be to maintain the diversity, not only of fishing opportunity, but also of traditionally non-game and economically unimportant species. With the relatively recent understanding of the importance of ecosystem level management, attention is being focused on native species that were often ignored or eradicated under past management practices. One such fish that has been largely ignored is the bowfin, Amia calva. Ecological data pertaining to bowfin natural history are limited and to date no attempt has been made to integrate bowfin into fisheries management decisions within the species native …