Terrestrial and Aquatic Ecology Commons^™

Biological Condition Of Money Pont Benthic Communities, Southern Branch Of The Elizabeth River (2010), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

The subtidal macrobenthic communities off Money Point in the Southern Branch of the Elizabeth River were quantitatively sampled in summer 2011. The designated Money Point study area will be a part of a sediment contaminant remediation effort. The primary objectives of this study were to: (1) characterize the biological health of the benthos of Money Point and (2) produce an historical data base that will allow an assessment of the effectiveness of the proposed sediment contamination remediation efforts with respect to Money Point benthos.

The most quantitative characterization of the benthos of the Elizabeth River watershed was the …

Rats As Forest Pests In Southeastern Virginia: Girdling By The Hispid Cotton Rat Sigmodon Hispidus As A Significant Source Of Mortality Of Loblolly Pines (Pinus Taeda) In A Successional Pine Forest, Robyn M. Nadolny

Biological Sciences Theses & Dissertations

The hispid cotton rat (Sigmodon hispidus) is a common field rodent throughout the southeastern US, where volunteer loblolly pine trees (Pinus taeda) invade open space and begin the process of ecological succession from field to pine forest. Recent analysis of the diet of S. hispidus indicates that loblolly pine bark is stripped and eaten during the winter months. In this study, we explored the extent of rodent girdling on a 1.23 ha grid in a successional pine forest in southeastern Virginia. During the winter of 2005 we observed damage to 65% of trees in our study area, with 98% …

Abundance Of Eukaryotic Microbes In The Deep Subtropical North Atlantic, Danielle Morgan-Smith, Gerhard J. Herndl, Hendrik M. Van Aken, Alexander B. Bochdansky

OES Faculty Publications

The meso- and bathypelagic ocean comprises the largest habitat on earth, yet we know very little about the distribution and activity of protists in this environment. These small eukaryotes are responsible for controlling bacterial abundance in the surface ocean and are major players in the material and energy transfer of pelagic food webs. In this paper, we quantify microbial eukaryotes in the deep North Atlantic, as well as provide a basic characterization of eukaryote community changes through the water column. To this end, we counted organisms using 2 different approaches: (1) catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH, also …

Comparative Phylogeography Of The Coral Triangle And Implications For Marine Management, Kent E. Carpenter, Paul H. Barber, Eric D. Crandall, Maria Carmen A. Ablan-Lagman, Ambariyanto Ambariyanto, Gusti Ngurah Mahardika, B. Mabel Manjaji-Matsumoto, Marie Antonette Junio-Menez, Mudjekeewis D. Santos, Craig J. Starger, Abdul Hamid A. Toha

Biological Sciences Faculty Publications

Extreme concentration of marine biodiversity and exploitation of marine resources in the Coral Triangle pose challenges to biogeographers and resource managers. Comparative phylogeography provides a powerful tool to test biogeographic hypotheses evoked to explain species richness in the Coral Triangle. It can also be used to delineate management units for marine resources. After about a decade of phylogeographical studies, patterns for theCoral Triangle are emerging. Broad connectivity in some species support the notion that larvae have maintained gene flow among distant populations for long periods. Other phylogeographic patterns suggest vicariant events resulting from Pleistocene sea level fluctuations, which have, at …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2009, Daniel M. Dauer, Harold G. Marshall, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Frederick A. Hoffman, Raghavendra Kurada

Status and Trends for Virginia Chesapeake Bay

The period prior to the implementation of the Chesapeake Bay Monitoring Program was characterized by a marked decline in the water quality of the Chesapeake Bay. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems have been related to the deteriorating water quality (e.g. USEPA, 1982,1983;Officer et al.,1984; Orth and Moore, 1984). The results of concentrated research efforts in the late 1970s and early 1980s stimulated the …

Foundational Checklist Of The Amphibians Of Wise County, Virginia, Sarah R.A. Davidson, David L. Chambers

Virginia Journal of Science

The Appalachian Mountains are arguably home to the highest degree of amphibian diversity in the world, particularly caudate (salamander) biodiversity. Despite the high degree of amphibian endemism in the Appalachians, several regions remain unsurveyed for amphibian species. In addition to this knowledge gap, we are in the midst of alarming amphibian biodiversity loss. Thus, it is of the utmost importance to bridge this knowledge gap by conducting surveys before some of these amphibian species are lost. We surveyed Wise County (previously unsurveyed county in the Appalachian Mountains with no records existing in the primary literature) over two years to assess …

The Mosquito (Diptera: Culicidae) Fauna Of The Blackwater Ecological Preserve: Effects Of Prescribed Burns And Habitat Type On Mosquito Abundance And Distribution, Norman A. Grefe Lll

Biological Sciences Theses & Dissertations

While mosquitoes (Diptera: Culicidae) are among the most studied of insect groups, much remains unknown about their distribution and response to environmental impacts such as prescribed burns. Blackwater Ecological Preserve, located near Zuni, Virginia, is a relict long leaf pine barren, parts of which undergo periodic prescribed burns to maintain and restore this fire-dependent ecosystem. To assess the impact of prescribed burns on mosquito activity and to determine associations between seasonal patterns of adult mosquito activity and habitat type, CDC light traps baited with dry ice were set (rom late April through October at Blackwater Ecological Preserve during the 2005 …

Carrion Beetles Of The Blackwater Ecologic Preserve: Community Structure Seasonal Patterns And Habitat Use, Amy L. Simons

Biological Sciences Theses & Dissertations

Carrion beetles (Silphidae) are important in the decomposition of carcasses in ecosystems. Two subfamilies, Nicrophorinae and Silphinae, differ in reproductive behaviors. The Nicrophinae, burying beetles, bury small carcasses to serve as food for the adults and their offspring. The Silphinae oviposit near larger carcasses. There is intense competition among all carrion beetles and other carrion feeders for carcasses, and beetle species have evolved seasonal activity patterns that minimize competition, such as when they are active and when they reproduce. Northern Silphidae communities are more diverse than southern communities, probably due to increased competition for carrion in the south.

This research …

The Loss Of Species: Mangrove Extinction Risk And Geographic Areas Of Global Concern, Beth A. Polidoro, Kent E. Carpenter, Lorna Collins, Norman C. Duke, Aaron M. Ellison, Joanna C. Ellison, Elizabeth J. Farnsworth, Edwino S. Fernando, Kandasamy Kathiresan, Nico E. Koedam, Suzanne R. Livingstone, Toyohiko Miyagi, Gregg E. Moore, Vien Ngoc Nam, Jin Eong Ong, Jurgenne H. Primavera, Serverino G. Salmo, Jonnell C. Sanciango, Sukristijono Sukardjo, Yamin Wang, Jean Wan Hong Yong

Biological Sciences Faculty Publications

Mangrove species are uniquely adapted to tropical and subtropical coasts, and although relatively low in number of species, mangrove forests provide at least US $1.6 billion each year in ecosystem services and support coastal livelihoods worldwide. Globally, mangrove areas are declining rapidly as they are cleared for coastal development and aquaculture and logged for timber and fuel production. Little is known about the effects of mangrove area loss on individual mangrove species and local or regional populations. To address this gap, species-specific information on global distribution, population status, life history traits, and major threats were compiled for each of the …

Body Size And Growth Patterns Of Microtus Pennsylvanicus (Ord.) In Chesapeake, Virginia, Sara E. Bell

Biological Sciences Theses & Dissertations

From Dec 2002-Feb 2008, a capture-mark-release study was conducted on 2 Chesapeake, Virginia populations of meadow voles (Microtus pennsylvanicus). The study sites were effectively 1 ha grids in old fields. Two modified live Fitch-type traps were placed at 12.5 m intervals on grids that were trapped for 3 days each month. In northern North America, voles have distinct breeding cohorts (spring and autumn), experience autumn and winter weight loss, demonstrate both delayed growth and sexual maturation in autumn-born young, have lifespans less than 15 weeks, and average about 35-50 g as adults. Chesapeake voles bred year-round, experienced no …

Inter-Island Variability In Above And Belowground Plant Biomass In Interior Marshes On The Virginia Barrier Islands, Staci B. Blecha

Biological Sciences Theses & Dissertations

The Virginia Coast Reserve's Long Term Ecological Research (LTER) site is of great interest because the barrier islands have been migrating, rapidly at times, and are exceptionally dynamic. The barrier islands have tidal saltwater marshes on the lagoon side and freshwater marshes on the island interiors. In these interior marshes on North Hog Island, South Smith Island, and North Parramore Island, salinity and depth to water table were measured to determine if these factors were influencing biomass and biomass allocation patterns in the marsh. Hog Island had the freshest interior marshes (0 and 0.7 ppm), and the most diverse (H'=0.84 …

Interisland Variability Of Dune Plant Community Structure On Virginia's Barrier Islands, Justin K. Shafer

Biological Sciences Theses & Dissertations

The barrier islands of the Virginia Coast Reserve LTER site provide an opportunity to study interisland variability of dune plant communities. My research focused on the variation in biomass and diversity of communities among islands and dune positions. Grassy dunes of young, intermediate and old age were sampled on Smith, Hog, and Parramore Islands. Aboveground biomass was obtained from harvest plots, and roots were extracted from cores. Data were collected on depth to groundwater and total soil nitrogen. Variation in mean aboveground biomass was evident among the islands with the highest values on Hog Island, followed by Smith, then Parramore …

A Habitat Model For The Detection Of Two-Lined Salamanders At C. F. Phelps Wildlife Management Area, Fauquier And Culpeper Counties, Virginia, Jay Mcghee, Michael D. Killian

Virginia Journal of Science

Aquatic salamanders represent an important component of Virginia river watersheds, but despite potential declines, few specifics are known about their habitat preferences. We surveyed the habitats of the northern two-lined salamander and collected data on an array of habitat variables associated with the species. We used a logistic regression analysis to develop a model predicting its presence or absence for a given 50m-transect. Our final model incorporated the variation in stream depth and direction of stream flow and accounted for 25% of the variation in our data. We conclude that stream depth variation is an important feature of salamander habitat …

The Impact Of Conservation On The Status Of The World's Vertebrates, Michael Hoffmann, Craig Hilton-Taylor, Ariadne Angulo, Monika Böhm, Thomas M. Brooks, Stuart H. M. Butchart, Kent E. Carpenter, Janice Chanson, Beth A. Polidoro, Jonnell C. Sanciangco

Biological Sciences Faculty Publications

Using data for 25,780 species categorized on the International Union for Conservation of Nature Red List, we present an assessment of the status of the world's vertebrates. One-fifth of species are classified as Threatened, and we show that this figure is increasing: On average, 52 species of mammals, birds, and amphibians move one category closer to extinction each year. However, this overall pattern conceals the impact of conservation successes, and we show that the rate of deterioration would have been at least one-fifth again as much in the absence of these. Nonetheless, current conservation efforts remain insufficient to offset the …

Habitat-Based Intraguild Predation By Caribbean Reef Octopus Octopus Briareus On Juvenile Caribbean Spiny Lobster Panulirus Argus, Mark J. Butler Iv, Jennifer A. Lear

Biological Sciences Faculty Publications

Intraguild predation occurs when species simultaneously compete for resources and interact as predator and prey, which describes the interaction between juvenile Caribbean spiny lobster Panulirus argus and Caribbean reef octopus Octopus briareus in the Florida Keys, USA. Octopuses are notorious predators of decapod crustaceans, and their use of crevice shelters suggests that they may also compete for shelter with their lobster prey. Lobsters use mainly chemical cues to detect and avoid octopus, so we hypothesized that the negative association between these species may be as much the consequence of avoidance of a superior competitor as it is of direct predation. …

Effect Of The Herbivorous Channel Clinging Crab (Mithrax Spinosissimus) On Patch Reef Algal Communities In The Florida Keys, Florida (Usa), Angela M. Mojica Osorio

Biological Sciences Theses & Dissertations

Coral reefs worldwide are undergoing dramatic habitat modification from coral to macroalgal dominance due to water pollution, coral diseases, global. warming, and the loss of herbivores. This phase-shift bas been particularly severe on Caribbean reefs due in large measure to the decline of piscine and echinoderm grazers, whose presence appears crucial for stemming the decline of coral reefs and enhancing their resilience. Virtually unknown, however, is the role of other macrograzers in coral reef ecosystems. This is the first study to examine the feeding ecology and grazer effect of the herbivorous West Indian spider crab (Mithrax spinosissimus) on inshore patch …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2007, Daniel M. Dauer, Harold G. Marshal, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Frederick A. Hoffman

Status and Trends for Virginia Chesapeake Bay

The period prior to the implementation of the Chesapeake Bay Monitoring Program was characterized by a marked decline in the water quality of the Chesapeake Bay. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems were related to deteriorating water quality (e.g. USEPA, 1982,1983;Officer et al.,1984; Orth and Moore, 1984). The results of concentrated research efforts in the late 1970s and early 1980s stimulated the establishment of …

Spatial Analyses And Repletion Of Gargathy Coastal Lagoon, Loreto Herraiz Gomez

OES Theses and Dissertations

Coastal lagoons and bays vary in shape and size in response to antecedent topography, geologic processes and sea level rise. Variations in shape and environmental conditions of coastal basins are believed to influence the distribution of benthic sub-environments and the exchange of water with the ocean and other adjacent coastal systems. Gargathy Inlet and its coastal lagoon vary spatially from the inlet, where the greatest depths are observed, to the mainland, dominated by shallow intertidal areas, colonized by marsh. Hypsographic and hydro-hypsographic analyses of Gargathy's coastal lagoon were the primary techniques applied to understand the relative distribution of the benthic …

Benthic Biological Monitoring Program Of The Elizabeth River Watershed (2007), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

Macrobenthic communities of the Elizabeth River watershed have been quantitatively sampled since summer 1999. This report presents the data from the ninth year of sampling in 2007. The three objectives of the Benthic Biological Monitoring Program of the Elizabeth River watershed are: (1) To characterize the health of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. (2) To conduct trend analyses on long-term data at 14 fixed-point stations to relate temporal trends in the benthic communities to changes in water and/or sediment quality. Trend analyses will be updated annually …

Influences Of The Loggerhead Sponge (Spheciospongia Vesparium) And The Vase Sponge (Ircinia Campana) On Nearshore Hard-Bottom Community Development In The Florida Keys, Scott Donahue

Biological Sciences Theses & Dissertations

Sponges, octocorals, and stony corals are the dominant sessile fauna within shallow, hard-bottom communities in the Florida Keys, FL (USA). The sponge component of these communities is not well studied and has been cyclically decimated from as early as 1844, most recently in south-central Florida Bay in 1991 and 1992, in apparent association with phytoplankton blooms. The purpose of this research was to examine ways in which sponges may contribute to the maintenance of hard-bottom communities. Specifically, I investigated: 1) the effect of sponges and physical structures on local sea floor scouring and thus the potential for maintenance of hard-bottom; …

Spatial And Trophic Dynamics Of A Macrofaunal Community On A High Energy Intertidal Sandflat, Sharon Ann Tatem

Biological Sciences Theses & Dissertations

Spatial and trophic interactions between macrofaunal species were studied in a high energy intertidal system during spring-summer low tides. Bioturbation by the enteropneust hemichordate, Balanoglossus aurantiacus (Girad), as evidenced by large fecal mounds, was a conspicuous feature on the sandflat Sediment characteristics were compared between ambient (non-fecal) and B. aurantiacus fecal mound types (fresh-oxidized, fresh-reduced, aged-oxidized, and aged-reduced). Fecal material was differentiated by age based on the presence or absence of mucus and the time of fecal deposition. The color of fecal material was used to assign oxidative state. Multiple isotopes (carbon, nitrogen, sulfur) were used to determine the origins …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2006, Daniel M. Dauer, Harold G. Marshall, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Frederick A. Hoffman

Status and Trends for Virginia Chesapeake Bay

The period prior to the implementation of the Chesapeake Bay Monitoring Program was characterized by a marked decline in the water quality of the Chesapeake Bay. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems have been related to the deteriorating water quality (e.g. USEPA, 1982,1983;Officer et al.,1984; Orth and Moore, 1984). The results of concentrated research efforts in the late 1970s and early 1980s stimulated the …

Seasonal Variation In Diet Of The Cotton Rat (Sigmodon Hispidus) Based On Fecal Analysis, Lynn A. Walker

Biological Sciences Theses & Dissertations

Cotton rats, Sigmodon hispidus, live in oldfields, habitats with a variety of mostly herbaceous plants. Based on other studies, the hispid cotton rat eats predominantly grasses, but grasses rarely are the only food. Fecal samples were collected each month during an ongoing capture-mark-release demographic study of the rodent community at a location in southern Chesapeake, Virginia. In the lab, five fecal pellets per animal were stained, placed on a microscope slide, and covered with starch-gel medium and coverslip. Then a clear nail polish was applied to produce a semi-permanent slide. Using a microscope and a set of reference slides, plant …

Benthic Biological Monitoring Program Of The Elizabeth River Watershed (2006), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

Macrobenthic communities of the Elizabeth River watershed have been quantitatively sampled since summer 1999. This report presents the data from the eigth year of sampling in 2006. The three objectives of the Benthic Biological Monitoring Program of the Elizabeth River watershed are: (1) To characterize the health of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. (2) To conduct trend analyses on long-term data at 14 fixed-point stations to relate temporal trends in the benthic communities to changes in water and/or sediment quality. Trend analyses will be updated annually …

Behavioral Enhancement Of Onshore Transport By Postlarval Caribbean Spiny Lobster (Panulirus Argus), Jason Seth Goldstein

Biological Sciences Theses & Dissertations

The onshore transport of meroplanktonic marine larvae or postlarvae is often complex, involving both active (i.e., behavior, swimming) and passive (i.e., oceanographic elements) transport mechanisms. Behaviors that modify passive transport have presumably evolved to situate larvae in settlement habitats where survival is enhanced. Active transport mechanisms have not been described for the puerulus postlarvae of any species of spiny lobster, despite their extraordinary mobility and known preference for specific settlement habitats. In the Florida Keys, for example, Caribbean spiny lobster (Panulirus argus) pueruli travel from oceanic waters into coastal areas where they settle within bushy, red macroalgae. I …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2005, Daniel M. Dauer, Harold G. Marshall, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Frederick A. Hoffman

Status and Trends for Virginia Chesapeake Bay

A marked decline in the water quality of the Chesapeake Bay has occurred over the past several decades. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems have been related to the deteriorating water quality. The results of concentrated research efforts in the late 1970s and early 1980s stimulated the establishment of Federal and state directives to better manage the Chesapeake Bay watershed. By way of the …

Benthic Biological Monitoring Program Of The Elizabeth River Watershed (2005), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

Macrobenthic communities of the Elizabeth River watershed have been quantitatively sampled since summer 1999. This report presents the data from the seventh year of sampling in 2005. The three objectives of the Benthic Biological Monitoring Program of the Elizabeth River watershed are: (1) To characterize the health of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. (2) To conduct trend analyses on long-term data at 14 fixed-point stations to relate temporal trends in the benthic communities to changes in water and/or sediment quality. Trend analyses will be updated annually …

Benthic Biological Monitoring Program Of The Elizabeth River Watershed (2004), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

Macrobenthic communities of the Elizabeth River watershed have been quantitatively sampled since summer 1999. This report presents the data from the sixth year of sampling in 2004. The three objectives of the Benthic Biological Monitoring Program of the Elizabeth River watershed are: (1) To characterize the health of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. ( 2) To conduct trend analyses on long-term data at 14 fixed-point stations to relate temporal trends in the benthic communities to changes in water and/or sediment quality. Trend analyses will be updated …

Interannual Variation Of Stratification In Lower Chesapeake Bay, Christopher S. Katzenmiller

OES Theses and Dissertations

Stratification in the water column can prove to be an important indicator to the state of the water column and ecosystem. The focus of this research is to evaluate trends in stratification in the Lower Chesapeake Bay. Detailed analysis was performed on a 14 year data set to study interannual variation in the region of study. Potential energy anomaly was used to quantify stratification. Potential energy anomaly is the amount of energy required to mix a water column. It is determined from the vertical density structure of density. Potential energy anomaly is the departure of potential energy from climate conditions. …

Side-By-Side Comparison Of Young Grab And Composite Petite Ponar Grab Samples For The Calculation Of The Benthic Index Of Biological Integrity(B-Ibi), Daniel M. Dauer, Michael F. Lane

Benthic Applications

(First paragraph) The Virginia Department of Environmental Quality (DEQ) intends to unite elements of its National Coastal Assessment Program (NCA) with its Chesapeake Bay Probabilistic Benthic Monitoring (CBP-PBM) Program beginning in the summer of 2005. The primary motivations for this decision were two-fold. First, the probable reduction of federal grant support for the NCA Program after the summer of 2004 would require considerable restructuring of the of DEQ’s estuarine probabilistic monitoring to continue with a comprehensive program in the future. Second, the current CBP-PBM Program has not provided sufficient data for the assessment of minor tidal tributary segments using the …