Terrestrial and Aquatic Ecology Commons^™

Ecology Of The Young-Of-The-Year Emerald Shiner (Notropis Atherinoides) In The Upper Niagara River, New York: Growth, Diversity, And Importance As A Forage Species, Jacob L. Cochran

Great Lakes Center Masters Theses

The emerald shiner (Notropis atherinoides) is a relatively understudied Cyprinid that fills a major keystone role in the Niagara River. Little is known about the emerald shiner’s early life history, such as the ecology of their larval and juvenile stages, which is the focus of this study. In the upper Niagara River, larvae first recruited into sampling gear in early July at a mean water temperature of 23^oC, with larvae appearing into August. Young-of-the-year (YOY) emerald shiners grew an average of 1.5 mm and 31.5 mg a week throughout the growing season with condition peaking during …

Herons And Egrets, Michael D. Hoy

Wildlife Damage Management Technical Series

Human-Wildlife Conflicts

Landscapes -- Herons and egrets commonly cause damage at aquaculture facilities and recreational fishing waters where fish are held at high densities. In one study, on average wading birds consumed from 4 to 24 golden shiners per day at minnow production facilities in Arkansas. Great blue herons and great egrets commonly feed at catfish production facilities in Mississippi. The tendency for herons and egrets to congregate in large feeding flocks often leads to extensive loss of fish at aquaculture facilities. Fish-eating birds also can have an impact on intensively managed sport fisheries. Damage occurs when herons and egrets …

Environmentally-Driven Variation In The Population Dynamics Of Gulf Menhaden (Brevoortia Patronus), Grant D. Adams

Master's Theses

Gulf Menhaden (Brevoortia patronus) is an abundant forage fish distributed throughout the Northern Gulf of Mexico (NGOM). Gulf Menhaden support the second largest fishery, by weight, in the United States and represent a key linkage between upper and lower trophic levels. Variation in the population dynamics can, therefore, pose consequences for the ecology and economy in the NGOM. Here we aim to understand variation in the individual and population dynamics of Gulf Menhaden throughout ontogeny and how such variation relates to environmental processes. We utilized a suite of fishery-dependent and –independent, remote sensing, modeled, and in situ data …

Habitat Associations With Small Mammal Communities At Wilson's Creek National Battlefield, Stephanie Anne Ellison

Graduate Theses/Dissertations

The purpose of this study was to aid the National Park Service at Wilson’s Creek National Battlefield with the reported habitat monitoring and management goals through vegetation and wildlife surveys within the park. I provided a description of two major habitat types that are of ecological concern, which included non-native ruderal grasslands and upland deciduous woodlands and forests. I evaluated small mammal communities to determine factors that may affect the detection of individual species and examined habitat associations with occupancy, as small mammals are good indicators of habitat quality. My study highlights the need to manage invasive species such as …

Nesting Success Of The Barn Owl (Tyto Alba) Using Nest Boxes In Southwest Missouri, Robert Grant Dickerson

Graduate Theses/Dissertations

The Barn Owl (Tyto alba) is a medium-sized owl belonging to the family Tytonidae. They raise young within natural cavities and on hard surfaces including nest boxes. The nesting success of Barn Owls, using wooden nest boxes, was studied in southwestern Missouri in 2016. Data were collected on clutch and brood sizes, the numbers of young fledged, and the species and amount of prey found in their regurgitated pellets. Interaction between Barn Owls and Great Horned Owls (Bubo virginianus) was also observed and documented. Nest box occupancy was 30% which is lower than in other studies, however this study included …

Investigating The Role Of Long Distance Dispersal In The Response Of Stream Fishes To Urbanization, Andrea Davis

Master of Science in Integrative Biology Theses

I conducted a 7-month mark-recapture study in two watersheds differing in urban impact in order to assess the role that long distance dispersal plays in the response of tolerant stream fishes to urbanization. Our two stream sites included a heavily impacted urban stream (watershed impervious surface cover ~30%) and a mildly impacted rural stream (watershed impervious surface cover ~6%). Species of interest were marked with 12mm HPT PIT tags and included a specialist, Campostoma oligolepis (n=189 urban site, 200 rural site) and a generalist, Lepomis auritus (n=136 urban site, 182 rural site). Three resampling instances for each site were conducted …

Habitat Management For Northern Bobwhites In Wisconsin: A Long-Term Assessment, Leroy R. Petersen, Robert T. Dumke, Barbara F. Duerksen

National Quail Symposium Proceedings

An experimental habitat management program was initiated to improve the carrying capacity for northern bobwhites ( Colinus virginianus) on private lands by the Wisconsin Department of Natural Resources (WDNR) in 1974. During 1975-80, extensive habitat restoration was undertaken on a 60-mi2 (l55-km 2) study area in Richland County to restore hedge row cover, improve riparian corridors and woodlot edges, and construct plots of food and shelter to function as wintering sites for bobwhites. Previous investigations in Wisconsin have documented that the long-term decline of bobwhites was the result of habitat deterioration, principally hedgerow cover. Elsewhere, continuous declines in bobwhite abundance …

Negative Density Dependence Mediates Biodiversity–Productivity Relationships Across Scales, Joseph A. Lamanna, R Travis Belote, Laura A. Burkle, Christopher P. Catano, Jonathan A. Myers

Biology Faculty Research

Regional species diversity generally increases with primary productivity whereas local diversity–productivity relationships are highly variable. This scale-dependence of the biodiversity–productivity relationship highlights the importance of understanding the mechanisms that govern variation in species composition among local communities, which is known as β-diversity. Hypotheses to explain changes in β-diversity with productivity invoke multiple mechanisms operating at local and regional scales, but the relative importance of these mechanisms is unknown. Here we show that changes in the strength of local density-dependent interactions within and among tree species explain changes in β-diversity across a subcontinental-productivity gradient. Stronger conspecific relative to …

Analysis Of Population Structure In A California Newt (Taricha Torosa) Metapopulation, Jessica Vincent

Mahurin Honors College Capstone Experience/Thesis Projects

As anthropogenic influences take an ever-increasing toll on the environment, understanding how environmental change affects species is paramount. Concern regarding decline in amphibian populations has spurred research examining the effects of habitat change on the dynamics of populations at landscape levels. One important goal is to understand how gene flow among populations is affected by changes in habitat. Biologists need to consider the relationship between gene flow and habitat alterations so that movements among individual breeding ponds can be maintained over time, reducing risk of local extinction events. This study focuses on patterns of gene flow among thirteen populations of …

A Global Community Effort To Decipher The Unique Biology Of Annual Killifish, Nibia Berois, Graciela Garcia, Rafael O. De Sá

Biology Faculty Publications

Over the past 50 years, annual killifishes arose as alternative model organisms for studies of vertebrate biology. The annual fish offers exceptional advantages for studies of genetics, genomics, developmental biology, population dynamics, ecology, biogeography, and evolution. They inhabit extremely variable freshwater environments in Africa and South America, have a short lifespan and a set of unique and fascinating developmental characteristics. Embryos survive within the dry substrate during the dry season, whereas the adult population dies. Thus, the survival of the populations is entirely dependent on the buried embryos that hatch the next rainy season. Although Old and New World species …

The Population Genetics Of Morro Bay Eelgrass (Zostera Marina), Julia Gardner Harencar

Master's Theses

Seagrass populations are in decline worldwide. Zostera marina (eelgrass), one of California’s native seagrasses, is no exception to this trend. In the last 8 years, Morro Bay, California has lost 95% of its eelgrass. Eelgrass is an ecosystem engineer, providing important ecosystem services such as sediment stabilization, nutrient cycling, and nursery habitats for fish. The failure of recent restoration efforts necessitates a better understanding of the causes of eelgrass decline in this estuary. Previous research on eelgrass in California has demonstrated a link between population genetic diversity and eelgrass bed health, ecosystem functioning, and resilience to disturbance and extreme climatic …

Mitigating The Conflict Between Pitfall-Trap Sampling And Conservation Of Terrestrial Subterranean Communities In Caves, Peter Kozel, Tanja Pipan, Nina Šajna, Slavko Polak, Tone Novak

International Journal of Speleology

Subterranean habitats are known for their rich endemic fauna and high vulnerability to disturbance. Many methods and techniques are used to sample the biodiversity of terrestrial invertebrate fauna in caves, among which pitfall trapping remains one of the most frequently used and effective ones. However, this method has turned out to be harmful to subterranean communities if applied inappropriately. Traditionally, pitfall traps have been placed in caves solely on the ground. Here we present an optimized technique of pitfall trapping to achieve a balance between sampling completeness and minimal disturbance of the fauna in the cave. Monthly we placed traps …

Breeding Stage And Parentage Affect Tameness In Common Loons, Mina Ibrahim

Student Scholar Symposium Abstracts and Posters

Tameness is a measure of tolerance towards human disturbance. As human disturbance and recreational activity are increasing, it is becoming more and more important to understand responses of species to this disturbance. Tameness has been shown to be influenced by an individuals characteristics and life history. Two possible determinants of tameness are breeding stage and parentage. We studied tameness in common loons (Gavia immer) specifically looking at the effects of breeding stage and parentage. Tameness was measured by flight initiation distance (FID), the distance at which a loon dove from an approaching human observer in a canoe. Loons …

Ecological Importance Of Invader Source Population And Disturbance In Aquatic Invasions, Nicole Elizabeth Graham

Graduate Theses and Dissertations

Invasive species are a global problem and their effects on recipient ecosystems may be mediated by disturbance and intraspecific variation. Crayfish can substantially influence stream structure and function, and invasive crayfish often have differential impacts than native crayfish in aquatic ecosystems. Since species traits often vary across a distribution, it is possible that invasive crayfish from different source populations may have distinct impacts on recipient ecosystem structure and function. In the Ozark Highlands of Arkansas and Missouri, USA, invasive O. neglectus (the Ringed Crayfish) may be leading to the displacement of native O. eupunctus (the Coldwater Crayfish). The objective of …

Assessment Of The Calling Detection Probability Throughout The Day Of Two Invasive Populations Of Bullfrog (Lithobates Catesbeianus) In Uruguay, Gabriel Laufer, Noelia Gobel, Alvaro Soutullo, Claudio Martinez-Debat, Rafael O. De Sá

Biology Faculty Publications

Bullfrog invasion is a major conservation concern in South America, so there is an urgent need to detect and monitor its many invasion foci. Amphibian sampling methods commonly use calling display, specifically the nuptial calls of males. With the aim of obtaining the better day period to sample and monitor Lithobates catesbeianus presence, we recorded its calls at three ponds in two invaded localities in Uruguay (Aceguá, Cerro Largo, and San Carlos, Maldonado) during the reproductive season. Then, we studied the records, obtaining a subsample of calling intensity at the first 5 minutes for each hour. We detected that vocalization …

Monitoring Anuran Populations In Bosque Protector Candelaria: A Multi-Year Comparison Of Frog Populations In An Ecuadorian Cloud Forest, Mindee Goodrum

Independent Study Project (ISP) Collection

For many years, amphibian populations around the world have been declining due to climate change, habitat loss or change, and diseases such as Ranavirus or the Chytrid fungus. However, there is still a great lack of information regarding the diversity of frogs, especially in the cloud forests of Ecuador where this study was conducted. This study was conducted in April and May of 2017 in the Ecominga Reserve of Cerro Candelaria in El Placer, Ecuador. The objective was to conduct visual-encounter surveys of several sites in the reserve and compare the results to studies that have been conducted in the …

A Reexamination The Freshwater Mussels (Family Unionidae) In Lower Big Walnut Creek, Kierra M. Lathrop

Undergraduate Distinction Papers

Freshwater mussels (family Unionidae) have become increasingly rare as the threats to water quality, habitat quality, and other aquatic animals, which the mussels depend on, have increased. The absence of mussels can provide evidence that one of these factors is insufficient. Lower Big Walnut Creek (BWC) is known to support a diverse community of mussels but they are unevenly distributed throughout the creek with abundance, density, and richness being high in the upper section, very low in the midsection, and intermediate in the lower section. It has been suggested water quality nor symbiotic fish host communities are responsible for this …

The North American Whistling-Ducks, Pochards, And Stifftails, Paul A. Johnsgard

Zea E-Books Collection

Although the 12 species representing three waterfowl tribes described in this volume are not closely related, they fortuitously provide an instructive example of adaptive evolutionary radiation within the much larger waterfowl lineage (the family Anatidae), especially as to their divergent morphologies, life histories, and social behaviors.

The whistling-ducks (Dendrocygna), with three known North American species, are notable for their permanent pair-bonds, extended biparental family care, and strong social cohesion. In contrast, males of the five typical pochards of North American diving ducks (Aythya) establish monogamous pair-bonds that are maintained only long enough to assure that the female’s eggs are fertilized. …

Estimating Seasonal Variation In Condition Of Yellow Perch, Emily Anne Powers

Biology Graduate Theses

Research has shown that Yellow Perch Perca flavescens, found throughout lakes and streams of North America, are good indicators of environmental health. Due to the correlation between fish condition and ecosystem health it is essential to reliably estimate condition to better manage our fisheries. Therefore, the study objectives were to measure the seasonal changes in adult Yellow Perch percent dry weight (PDW), and compare the reliability of bioelectrical impedance analysis (BIA) and morphometric-based estimates of condition. The seasonal fluctuations in average monthly PDW were measured over a two- year period and were sinusoidal in shape with peaks in August 2015 …

Beavers, Jimmy D. Taylor, Greg K. Yarrow, James E. Miller

Wildlife Damage Management Technical Series

The American beaver (Castor canadensis) (Figure 1) is known as an “ecosystem engineer” because of the benefits their dams provide to biological diversity and ecosystem function. It also is considered a “keystone species” because of its ability to transform its environment, creating new habitats upon which other species depend. Despite the many positive benefits beavers provide through foraging and dam building, beavers also create conflict with people when their activities cause damage. The authors of this publication acknowledge and appreciate the many positive benefits that beavers provide; however, the focus of this publication is to provide basic information on beaver …

Conservation Status Of The American Horseshoe Crab, (Limulus Polyphemus): A Regional Assessment, David R. Smith, H. Jane Brockmann, Mark Beekey, Timothy L. King, Michael J. Millard, Jaime Zaldívar-Rae

Biology Faculty Publications

Horseshoe crabs have persisted for more than 200 million years, and fossil forms date to 450 million years ago. The American horseshoe crab (Limulus polyphemus), one of four extant horseshoe crab species, is found along the Atlantic coastline of North America ranging from Alabama to Maine, USA with another distinct population on the coasts of Campeche, Yucatán and Quintana Roo in the Yucatán Peninsula, México. Although the American horseshoe crab tolerates broad environmental conditions, exploitation and habitat loss threaten the species. We assessed the conservation status of the American horseshoe crab by comprehensively reviewing available scientific information on its range, …

An Assessment Of Potential False Positive E.Coli Pyroprints In The Cplop Database, Skyler A. Gordon

Master's Theses

The genetic information found in each species of organism is unique, and can be used as a tool to differentiate at the molecular level. This has caused rapid genotyping methods to become the cornerstone of a new area of research dependent on reading the genome as a form of identification. One of these specific identification methods, known as pyroprinting, relies on the small variation of DNA sequences within the same species to develop a unique, reproducible fingerprint. By simultaneously pyrosequencing multiple polymorphic loci within the ribosomal operons known as the intergenic transcribed spacers, a reproducible output is obtained, known as …

Red Snapper Distribution On Natural Habitats And Artificial Structures In The Northern Gulf Of Mexico, Mandy Karnauskas, John F. Walter Iii, Matthew D. Campbell, Adam G. Pollack, J. Marcus Drymon, Sean P. Powers

University Faculty and Staff Publications

In 2011, an intensive, multiple-gear, fishery-independent survey was carried out in the northern Gulf of Mexico (GOM) to collect comprehensive age and length information on Red Snapper Lutjanus campechanus. Based on this synoptic survey, we produced a spatial map of Red Snapper relative abundance that integrates both gear selectivity effects and ontogenetically varying habitat usage. Our methodology generated a spatial map of Red Snapper at a 10-km2 grid resolution that is consistent with existing knowledge of the species: Red Snapper occurred in relatively high abundances at depths of 50–90 m along the coasts of Texas and Louisiana and in smaller, …

Geographic Distribution: Acrantophis Dumerili (Duméril’S Madagascan Ground Boa). Usa. Florida., Louis A. Somma, Kenneth L. Krysko, Laurence L. Conner

Papers in Herpetology

The geographic distribution of Acrantophis dumerili, a nonindigenous introduced species in Florida, with new records, is presented.

Acrantophis dumerili is indigenous to southern and southwestern Madagascar. We provide the first vouchers for Miami-Dade and Bay counties, which were likely escaped or released pets. Florida already has three established species of booid snakes (one boa, two pythons), all introduced through the pet trade pathway. Although there is no clear evidence for an established population of A. dumerili in Florida at this time, the Bay County individuals in a rural area in the Florida panhandle are a particular concern given that two …

Minnesota Fish Taxonomic Key 2017 Edition, Warren Lamb

Journal of Earth and Life Science

Minnesota’s landscape is maze of lakes and river that are home to a recorded total of 163 species of fish. This document is a complete and current dichotomous taxonomic key of the Minnesota fishes. This key was based on the 1972 “Northern Fishes” key (Eddy 1972), and updated based on Dr. Jay Hatch’s article “Minnesota Fishes: Just How Many Are There?” (Hatch 2016). Any new species or family additions were also referenced to the 7th edition of the American Fisheries society “Names of North American Fishes” (Page et al. 2013) to assess whether a fish species is currently recognized by …

Redd Habitat Selection For Brook Trout In The Necktie River Bemidji, Mn, William Varela, Zachary Buckley

Journal of Earth and Life Science

The presence of quality suitable habitat is important for the success of naturally reproducing Brook Trout populations. Therefore, measuring redd habitat Brook Trout select for was the focus of this study. Brook Trout redds were observed during the spawning season of 2016. We identified a total of 18 redds in the Necktie River in late October and early November. Specific environmental variables associated with redd selection were measured: velocity, in-stream cover, canopy cover, bank overhang, river width, substrate type and size, temperature, and max-depth. The same environmental variables were measured for 30 randomly selected sites. Redds were distributed in riffles …

Distribution Changes, Genetic Population Structure, And A Novel Environmental Dna (Edna) Detection Method For Darters (Subgenus Nothonotus) In The Upper Ohio River Watershed, Anthony S. Honick

Electronic Theses and Dissertations

In the upper Ohio River watershed three species of small-bodied benthic fish the Bluebreast Darter, Etheostoma (Nothonotus) camurum (Cope), the Tippecanoe Darter, Etheostoma (Nothonotus) tippecanoe Jordan and Evermann, and the Spotted Darter, Etheostoma (Nothonotus) maculatum Kirtland previously existed in disjunct distributions due to poor water quality and habitat degradation. Signs of recovery indicated that these species were moving from areas of refugia into the deeper mainstem waters of the Allegheny and Ohio rivers and expanding their distributions. To provide information for the proper conservation management of these species this dissertation was divided into three stages: 1) distribution records were updated …

Sandhill And Whooping Cranes, Jeb Barzen, Ken Ballinger

Wildlife Damage Management Technical Series

As sandhill crane populations continue to grow in the United States, so too does crop damage, property damage to homeowners, and the risk of crane collisions with aircraft. Whooping crane populations also continue to grow, but with a global population of about 500 individuals (as of 2017), damage is rare and problems often require different solutions due to the species’ endangered status. The behavioral characteristics and habitat needs of sandhill and whooping cranes set the stage for conflict between these birds and people. Recognizing behavioral differences between territorial and non-territorial cranes greatly improves the effectiveness of any management effort.

Human-Wildlife …

Wildlife At Airports, Travis L. Devault, Bradley F. Blackwell, Jerrold L. Belant, Michael J. Begier

Wildlife Damage Management Technical Series

Collisions between aircraft and wildlife (wildlife strikes) are common occurrences across the developed world. Wildlife strikes are not only numerous, but also costly. Estimates suggest that wildlife strikes cost the civil aviation industry in the U.S. up to $625 million annually, and nearly 500 people have been killed in wildlife strikes worldwide. Most wildlife strikes occur in the airport environment: 72 percent of all strikes occur when the aircraft is ≤500 ft (152 m) above ground level, and 41 percent of strikes occur when the aircraft is on the ground during landing or takeoff. Thus, management efforts to reduce wildlife …

Burbot Growth Rates In A Northern Mesotrophic Lake, Samuel J. Peterson

Journal of Earth and Life Science

Burbot Lota lota has a circumpolar distribution throughout cold-water areas and is the only freshwater member of the family Gadidae. There are currently very few management techniques applied to Burbot throughout their northern extent. Growth is an indicator of fish health, biomass, and habitat quality; therefore, the objective of this study was to determine the growth rate of Burbot in Lake Bemidji. Burbot (n = 45) were collected along three sites on Lake Bemidji for years 2015-2017. Age was determined from sagittal otoliths, the marginal zones of which were opaque from December to May and translucent from June to November. …