Terrestrial and Aquatic Ecology Commons^™

Cortex Necessary For Pain — But Not In Sense That Matters, Adam J. Shriver

Animal Sentience

Certain cortical regions are necessary for pain in humans in the sense that, at particular times, they play a direct role in pain. However, it is not true that they are necessary in the more important sense that pain is never possible in humans without them. There are additional details from human lesion studies concerning functional plasticity that undermine Key’s (2016) interpretation. Moreover, no one has yet identified any specific behaviors that mammalian cortical pain regions make possible that are absent in fish.

Why Is Fish “Feeling” Pain Controversial?, E. Don Stevens

Animal Sentience

In his excellent target article, Key (2016) develops a mechanistic argument in an attempt to show why it is unlikely that fish can “feel” pain or for that matter, “feel” anything. The topic is controversial and likely to achieve the goal of getting many hits for the inaugural issue of the new journal, Animal Sentience. In my view, the question is unlikely to be answered, for two reasons. First, because the proponents of the “fish feel pain” controversy are untrained and unskilled in the details and jargon of neurophysiology and/or neuroanatomy, and the opponents of the controversy, like Key, …

Fish Pain: A Painful Topic, Carl Safina

Animal Sentience

If fish cannot feel pain, why do stingrays have purely defensive tail spines that deliver venom? Stingrays’ ancestral predators are fish. And why do many fishes possess defensive fin spines, some also with venom that produces pain in humans? These things did not evolve just in case sentient humans would evolve millions of years later and then invent scuba. If fish react purely unconsciously to “noxious” stimuli, why aren’t sharp jabbing spines enough? Why also stinging venom?

How Welfare Biology And Commonsense May Help To Reduce Animal Suffering, Yew-Kwang Ng

Animal Sentience

Welfare biology is the study of the welfare of living things. Welfare is net happiness (enjoyment minus suffering). Since this necessarily involves feelings, Dawkins (2014) has suggested that animal welfare science may face a paradox, because feelings are very difficult to study. The following paper provides an explanation for how welfare biology could help to reduce this paradox by answering some difficult questions regarding animal welfare. Simple means based on commonsense could reduce animal suffering enormously at low or even negative costs to humans. Ways to increase the influence of animal welfare advocates are also discussed, focusing initially on farmed …

Is Sentience Only A Nonessential Component Of Animal Welfare?, Ian J.H. Duncan

Animal Sentience

According to Broom (2014), animal welfare is a concept that can be applied to all animals, including single-celled organisms that are obviously not sentient. Such a stance makes it difficult to draw a connection between welfare and sentience, and that is the book’s downfall. Some excellent points are made about sentience and there are very good discussions on animal welfare. However, unless sentience is considered the essential component of welfare, any attempt to link the two phenomena will be unsuccessful — and that, indeed, is the case with this book.

Why Animal Welfarism Continues To Fail, Lori Marino

Animal Sentience

Welfarism prioritizes human interests over the needs of nonhuman animals. Despite decades of welfare efforts other animals are mostly worse off than ever before, being subjected to increasingly invasive and harmful treatments, especially in the factory farming and biomedical research areas. A legal rights-based approach is essential in order for other animals to be protected from the varying ethical whims of our species.

Microsatellite Analysis Of Population Structure In The Santa Ana Speckled Dace (Rhinicthys Osculus), Stacey A. Nerkowski

Electronic Theses, Projects, and Dissertations

Rhinichthys osculus, the Speckled Dace, is one of the most ubiquitous fish in western North America. Within the Southern California region, the local taxon is known as the Santa Ana Speckled Dace. The purpose of this study was to characterize and identify polymorphic microsatellite markers for R. osculus in which twenty-three were identified through Illumina pair-end sequencing. Seven of these loci were then used to examine the patterns of genetic variation and population structure that occurred within and among the watersheds in the Southern California. The study also examined the regional relationships among Southern California, Central California and Owen’s …

Butterfly Biology, Joshua Feingold

Quadrivium: A Journal of Multidisciplinary Scholarship

A photographic exploration of butterflies from larvae to adults in Davie, Florida.

Genetically Based Low Oxygen Affinities Of Felid Hemoglobins: Lack Of Biochemical Adaptation To High-Altitude Hypoxia In The Snow Leopard, Jan E. Janecka, Simone S. E. Nielsen, Sidsel D. Andersen, Federico G. Hoffmann, Roy E. Weber, Trevor Anderson, Jay F. Storz, Angela Fago

School of Biological Sciences: Faculty Publications

Genetically based modifications of hemoglobin (Hb) function that increase blood–O₂ affinity are hallmarks of hypoxia adaptation in vertebrates. Among mammals, felid Hbs are unusual in that they have low intrinsic O₂ affinities and reduced sensitivities to the allosteric cofactor 2,3-diphosphoglycerate (DPG). This combination of features compromises the acclimatization capacity of blood–O2 affinity and has led to the hypothesis that felids have a restricted physiological niche breadth relative to other mammals. In seeming defiance of this conjecture, the snow leopard (Panthera uncia) has an extraordinarily broad elevational distribution and occurs at elevations above 6000 m in the Himalayas. Here, …

A Molecular Framework Phylogeny For Ptilotus (Amaranthaceae), Timothy A. Hammer

Biological Sciences Theses & Dissertations

Ptilotus (Amaranthaceae) is an Australian genus with over 100 species, most of which occur in arid Western Australia. Ptilotus has been a taxonomically difficult genus; despite rigorous morphological studies into the genus over many years, previous workers have found it difficult to delimit infrageneric groups due to inconsistent morphological variation. With the goal to establish a phylogenetic framework for the genus, 100 taxa were sampled, including 87 Ptilotus spp., and the ITS nrDNA and matK cpDNA were sequenced. The phylogeny was reconstructed using Bayesian, maximum likelihood and maximum parsimony analyses on separate and concatenated datasets. Morphological characters were assessed and …

Body Size And Species Richness Changes In Glyptosaurinae (Squamata: Anguidae) Through Climatic Transitions Of The North American Cenozoic, Sara Elshafie

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Poikilothermic vertebrates offer excellent climate proxies based on relationships between environment and measurable variables such as body size and species richness. Relationships of these variables in lizards to environmental transitions over long time scales are poorly understood. Here I show that patterns of body size and species richness in a lizard clade, Glyptosaurinae (Squamata: Anguidae), correspond to known histories of paleotemperatures through the Cenozoic of North America. Glyptosaurines have the richest fossil record among North American Cenozoic lizards and exhibit a wide range of skull sizes. In order to estimate body size for glyptosaurines and other fossil anguids, I collected …

Effects Of Toxic Cyanobacteria (Microcystis Aeruginosa) On The Feeding And Reproduction Ecology Of The Copepod Eurytemora Affinis From Green Bay, Lake Michigan, Nicholas J. Barrett

Lawrence University Honors Projects

Toxic Cyanobacteria is known to be a bad food source to consumers as well as a main contributor to harmful algal blooms. This study investigates the feeding relationship between an invasive copepod in the Great Lakes system, Eurytemora affinis, and a toxic strain of cyanobacteria, Microcystis aeruginosa. E.affinis has been shown to feed on toxic cyanobacteria. By measuring the filtering rate, ingestion rate, egg production and offspring size between three different food conditions, we hope to gain insight into the effects of toxic cyanobacteria on the feeding and reproduction of this copepod. Food sources include a good green algal …

Statistical And Comparative Phylogeography Of Mexican Freshwater Taxa In Extreme Aquatic Environments, Lyndon M. Coghill

LSU New Orleans Theses and Dissertations

Phylogeography aims to understand the processes that underlie the distribution of genetic variation within and among closely related species. Although the means by which this goal might be achieved differ considerably from those that spawned the field some thirty years ago, the foundation and conceptual breakthroughs made by Avise are nonetheless the same and are as relevant today as they were two decades ago. Namely, patterns of neutral genetic variation among individuals carry the signature of a species’ demographic past, and the spatial and temporal environmental heterogeneity across a species’ geographic range can influence patterns of evolutionary change. Aquatic systems …

Dietary Preference Of The Queensnake (Regina Septemvittata), Timothy J. Brust

Theses, Dissertations and Capstones

The Queensnake (Regina septemvittata) is a small secretive water snake found throughout the eastern United States. Once common, their numbers have declined to the extent that they are now threatened throughout most of their range, largely the result of pollutant-based reduction in prey species. These snakes are assumed to eat molted crayfish exclusively. For some common crayfish species, molting happens only twice a summer during a two- week period. It has not been documented if Queensnakes eat anything besides crayfish on a regular basis. The purpose of this study was to determine the prey preference of Queensnakes with particular focus …

Euryhalinity In An Evolutionary Context, Eric T. Schultz, Stephen D. Mccormick

EEB Articles

This chapter focuses on the evolutionary importance and taxonomic distribution of euryhalinity. Euryhalinity refers to broad halotolerance and broad halohabitat distribution. Salinity exposure experiments have demonstrated that species vary tenfold in their range of tolerable salinity levels, primarily because of differences in upper limits. Halotolerance breadth varies with the species’ evolutionary history, as represented by its ordinal classification, and with the species’ halohabitat. Freshwater and seawater species tolerate brackish water; their empirically-determined fundamental haloniche is broader than their realized haloniche, as revealed by the halohabitats they occupy. With respect to halohabitat distribution, a minority of species (<10%) are euryhaline. Habitat-euryhalinity is prevalent among basal actinopterygian fishes, is largely absent from orders arising from intermediate nodes, and reappears in the most derived taxa. There is pronounced family-level variability in the tendency to be halohabitat-euryhaline, which may have arisen during a burst of diversification following the Cretaceous-Palaeogene extinction. Low prevalence notwithstanding, euryhaline species are potent sources of evolutionary diversity. Euryhalinity is regarded as a key innovation trait whose evolution enables exploitation of new adaptive zone, triggering cladogenesis. We review phylogenetically-informed studies that demonstrate freshwater species diversifying from euryhaline ancestors through processes such as landlocking. These studies indicate that some euryhaline taxa are particularly susceptible to changes in halohabitat and subsequent diversification, and some geographic regions have been hotspots for transitions to freshwater. Comparative studies on mechanisms among multiple taxa and at multiple levels of biological integration are needed to clarify evolutionary pathways to, and from, euryhalinity.

Phenotypic Plasticity Of Oral Jaw Dentition In Archosargus Probatocephalus, Cynthia E. Worcester

Masters Theses & Specialist Projects

Phenotypic plasticity, the capacity of a single genotype to exhibit variable phenotypes in different environments, is common in many species. A sample of wild caught Archosargus probatocephalus, also known as sheepshead, from Florida was randomly divided into two treatment groups: one group was fed soft prey, Mercenaria sp. muscle tissue, and the other group was fed hard prey, Mercenaria sp. in the shell, for 365 days. It was hypothesized that the sheepshead fed hard prey would have a thicker tooth enamel layer containing more calcium, and therefore be stronger than the tooth enamel layer of those fed soft prey …

Phenotypic Plasticity Of Rattlesnake Trophic Morphology, Matthew Thomas Smith

Graduate Theses and Dissertations

The trophic morphology of gape-limited predators constrains the shape and size of prey items they can ingest. Trophic morphology consists of any morphological feature that is involved in the handling and ingestion of food. Diet has a profound effect on the morphology of many gape-limited predators. Identifying how prey type and resource level affect the morphology of different populations is an essential step in understanding the mechanisms contributing to patterns of morphological diversity. Species interactions (Chapter 1) induce plasticity in morphology that can lead to increased fitness, morphological divergence, and eventually speciation.

In Chapter 2, a laboratory study tested the …

The Dynamics Of Location: Influence Of Predation By Chaoborus Larvae On Rotifer Diel Vertical Migration Patterns, Kristina P. Riemer

Lawrence University Honors Projects

The locations of freshwater organisms in lakes are determined by the convergence of many competing factors. While predation pressure is one of these, also important are areas of food concentration and the physical and chemical constraints of a system. Diel vertical migration is a behavior exhibited by freshwater organisms in many taxa that is the result of balancing these factors. Diel vertical migration consists of movement by these organisms throughout the water column in accordance with a 24 hour cycle. This oscillation is generally driven by the competing factors of predation pressure and food acquisition, and is modified by physical …

Salinity Preference Of Alaskan Threespine Stickleback: Test For Divergence In Halotaxis Between Ancestral And Landlocked Populations, David Fryxell, Eric T. Schultz

EEB Articles

Glacial retreat during the Pleistocene caused landlocking of anadromous Alaskan threespine stickleback, Gasterosteus aculeatus, furnishing a natural ‘experiment’ in osmoregulatory divergence. The objective of this study was to assess the effects of individual acclimation and population divergence on salinity preference. Full-sibling families of marine, anadromous, and freshwater-landlocked populations of stickleback were reared in common environments until 3 weeks post-hatch, then were split and acclimated to low or high salinity. At 6 to 8 weeks of age the six experimental groups were tested for salinity preference in a tank that offers fish a choice of compartments with different salinities arranged …

A New Species Of Frog (Strabomantidae: Pristimantis) From Peru With Comments On Its Ectoparasites (Acari: Trombiculidae), Alan W. Brus

Honors Projects

In South America, frogs of the genus Pristimantis are diverse and can be found from lowland forests to elevations of about 4000 m in the Andes. The 444 known species of Pristimantis belong to 16 species groups. One of these groups is the Pristimantis orestes Group, the 14 members of which inhabit the páramo, puna, and upper montane forests in southern Ecuador (3 species) and Peru (11 species). Species of the Pristimantis orestes Group are characterized by having snout-vent lengths ranging from 18.0 to 29.4 mm, short robust bodies, relatively short snouts, narrow digital discs, and areolate ventral skin. Some …

Communication For Mate Selection In Anurans: Dominant Frequency Versus Snout-Vent-Length, Shari Jean Kunert

Department of Environmental Studies: Undergraduate Student Theses

No abstract provided.

Reconstructing Species Responses To Past Climatic Changes Using Niche Modeling And Genetic Data, Tereza Jezkova

UNLV Theses, Dissertations, Professional Papers, and Capstones

Glacial – interglacial cycles have a pronounced impact on species distributions and genetic structure. Many species shift their distributions to lower latitudes and altitudes during the colder glacial periods and expand northwards and up the elevation during warmer interglacial periods. Some species however are capable of adapting to changing environment which allows them to persist in place despite climatic changes. I explored how climatic changes after the last glacial maximum (LGM) effected two species inhabiting the deserts of western North America: one mammal (Chisel-toothed Kangaroo Rat, Dipodomys microps) and one reptile (Desert Horned Lizard, Phrynosoma platyrhinos). I used …

Ecology And Relationships Of Rhabdias Spp. (Nematoda: Rhabdiasidae) From North American Amphibians And Reptiles, Gabriel J. Langford

School of Biological Sciences: Dissertations, Theses, and Student Research

Lungworms of the cosmopolitan genus Rhabdias (Nematoda: Rhabdiasidae) are among the most common parasites of amphibians and squamate reptiles. The life cycles, life histories, host specificities, and evolutionary relationships of Rhabdias spp. were studied through examination of their free-living and parasitic stages in amphibians and reptiles. This study found free-living development of anuran lungworms was primarily limited to heterogonic reproduction, whereas snake lungworms primarily reproduced homogonically. Infective anuran lungworms penetrated the skin of frogs and toads; in contrast, snake lungworms penetrated snake esophageal tissue during per os infections. Our molecular phylogeny strongly supported separate clades for anuran and snake lungworms, …

The Very Basics Of Sustainability - An Alternative Viewpoint (Slides With Audio) (Large File! To Speed Up Download, Right-Click On "Download" Link To Save To Own Pc.), Jim Mcgovern

Other resources

This presentation sets out the very basics of ‘sustainability’, although a definition of sustainability is not attempted. Some of the very basics are the context in which the Earth and humankind exist in space and time, the Earth’s climate, the Earth’s population and humankind’s options and choices. The author advocates keeping an open mind on all available options, including the use of oil, gas, coal, tar sands, carbon capture and sequestration, nuclear power etc., as well as the technologies that are more widely considered ‘green’. The author also argues that, in addressing the challenges that humankind faces, globally concerted effort …

A Sex Difference In Seasonal Timing Of Birth In A Livebearing Fish, Eric T. Schultz

EEB Articles

Sex differences in seasonal timing include differences in hatch- or birth-date distribution and differences in the timing of migration or maturation such as protandrous arrival timing (PAT), which is early male arrival at breeding sites. I describe a novel form of protandrous arrival timing, as a sex difference in birth-date distribution in a live-bearing fish (Dwarf Perch, Micrometrus minimus). In this species, birth coincides with arrival at breeding sites because newborn males are sexually active. A series of samples of pregnant females and young of year was collected in Tomales Bay, CA. I analyzed the daily age record in otoliths …

The Effect Of Male And Female Body Size On Mating Behavior Of Male Fairy Shrimp, Eubranchipus Neglectus, Craig Feigenbaum, Paul V. Switzer

Faculty Research & Creative Activity

We studied size-related mating patterns in the freshwater fairy shrimp Eubranchipus neglectus in the laboratory. Males were provided with relatively small or large females that they could only sense by vision. We recorded the number of times a male pursued the female (“follows”), the duration of these follows, and the number of times a male attempted to grasp the female. Relatively large males performed more mating behavior than relatively small males. Furthermore, males (regardless of their own size) exhibited more mating behavior towards large than small females. They followed large females more frequently, attempted to grasp large females more often, …

The Effect Of Male And Female Body Size On Mating Behavior Of Male Fairy Shrimp, Eubranchipus Neglectus, Craig Feigenbaum, Paul Switzer

Faculty Research & Creative Activity

We studied size-related mating patterns in the freshwater fairy shrimp Eubranchipus neglectus in the laboratory. Males were provided with relatively small or large females that they could only sense by vision. We recorded the number of times a male pursued the female (“follows”), the duration of these follows, and the number of times a male attempted to grasp the female. Relatively large males performed more mating behavior than relatively small males. Furthermore, males (regardless of their own size) exhibited more mating behavior towards large than small females. They followed large females more frequently, attempted to grasp large females more often, …

Decreased Reproductive Investment Of Female Threespine Stickleback Gasterosteus Aculeatus Infected With The Cestode Schistocephalus Solidus: Parasite Adaptation, Host Adaptation, Or Side Effect?, Eric T. Schultz, Michelle Topper, David C. Heins

EEB Articles

Parasitic infections may cause alterations in host life history, including changes in reproductive investment (absolute amount of energy allocated to reproduction) and reproductive effort (proportion of available energy allocated to reproduction). Such changes in host life history may reflect: 1) a parasite tactic: the parasite adaptively manipulates energy flow within the host so that the host is induced to make a reduction in reproductive effort and reproductive investment, making more energy available to the parasite; 2) no tactic: there is no change in host reproductive effort and reproductive investment simply decreases as a side effect of the parasite depleting host …

Perspectives On Reproduction And Life History In Baboons, Larissa Swedell, Steven R. Leigh

Publications and Research

No abstract provided.

Do Timing And Pattern Of Myogenesis Correlate With Life History Mode In Anurans?, Matthew T. Smetanick, Rafael O. De Sá, Gary P. Radice

Biology Faculty Publications

The timing and pattern of myogensis varies among anurans that have been studied and the different patterns may provide useful phylogenetic information. Specific myogenic markers have been described (Muntz, 1975; Kielbowna, 1981; Boudjelida & Muntz, 1987; Radice et al., l989) and they can provide information on evolutionary changes for closely related lineages within a clade. For example, we previously compared first appearance of a muscle-specific protein, first twitch of axial muscle, onset of multinucleation within axial myotome, and first heartbeat in two pipid genera (Smetanick, et al., 1999). We found that although the timing of myogensis differed, the sequence of …