Terrestrial and Aquatic Ecology Commons^™

Expansion Of The Chlorovirus Genus By Studies On Virus Natural History And Chlorella Host Metabolism, Cristian F. Quispe

School of Biological Sciences: Dissertations, Theses, and Student Research

Inland waters cover about 2.5 percent of our planet and harbor huge numbers of known and unknown microorganisms including viruses. Viruses likely play dynamic, albeit largely undocumented roles in regulating microbial communities and in recycling nutrients in the ecosystem. Phycodnaviruses are a genetically diverse, yet morphologically similar, group of large dsDNA-containing viruses (160- to 560-kb) that inhabit aquatic environments. Members of the genus Chlorovirus are common in freshwater. They replicate in eukaryotic, single-celled, chlorella-like green algae that normally exist as endosymbionts of protists in nature. Very little is known about the natural history of the chloroviruses and how they achieve …

Estudios En Biodiversidad, Volumen I, Griselda Pulido-Flores, Scott Monks, Maritza López-Herrera

Zea E-Books Collection

Este libro es el producto del trabajo colegiado que han desarrollado los profesores, investigadores, y estudiantes que conforman la Red Temática de Calidad Ambiental y Desarrollo Sustentable, a través del macroproyecto “Evaluación del impacto ambiental por actividades antropogénicas: Alternativas de mitigación”. El cual fue apoyado con recursos financieros por parte del Programa para el Desarrollo Profesional Docente (PRODEP), de la Secretaria de Educación Pública (SEP) en México. Las instituciones de educación superior y cuerpos participantes en la red temática son la Universidad Autónoma del Estado de Hidalgo (Uso, Manejo y Conservación de la Biodiversidad UAEHCA- 10; Ciencias Ambientales UAEH-CA-59); Universidad …

Predicting Toucan Locations In Panama Using Arcgis, Daniel J. Herrera

Geography: Student Scholarship & Creative Works

Toucans are omnivorous birds native to southern Latin America and South America. They are non-migratory, and their range is disputed among experts. In an attempt to develop a better understanding of the range and behavior of toucans, correlations between toucan presence and geographic features of the area were analyzed to create a location probability map.

Research, Monitoring, Assessment And Development Plan 2015 – 2020, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

When An Invasive Plant Fails To Invade, Stephen L. Young

West Central Research and Extension Center, North Platte

In 2012, much of the US Midwest was gripped in one of the most severe droughts on record. While conducting experimental fieldwork at a site in Nebraska during June of that year, I noticed a single musk thistle (Carduus nutans; Figure 1) that appeared to be in the bolt or early flowering stage, which is typical for the species at that time. Here, however, two things were unusual: this plant was less than 1 meter tall (with adequate moisture and light, musk thistle typically grows to heights of 1–2.5 meters before flowering), and was only 3 months old (the bolt …

Radiocarbon Isotopic Classification Of Deep Tropical Forest Soils, Brooke Butler, Karis J. Mcfarlane, Jennifer Pett-Ridge, Katherine A. Heckman

STAR Program Research Presentations

Tropical forest soils have an important role in global carbon (C) stocks. Small changes in the cycling of C could drastically affect atmospheric carbon dioxide (CO2) concentrations and active cycling of carbon in a forest community. Currently, little is understood of how tropical forest soils will respond to the increasing global temperatures. To examine the effects of warming/ drought on losses of older versus younger soil C pools, we implemented radiocarbon (14C) isotopic characterization of various soil plot samples and depths from the Luquillo Experimental Forest, Puerto Rico. 14C was measured using Accelerated Mass Spectrometry (AMS) from catalytically condensed carbon …

Winter Freeze Decreases The Emergence Of Fauna And Flora In California Vernal Pools, Korena S. Hendryx, Jamie Kneitel

STAR Program Research Presentations

Impacts of global climate change is observed in many ecological systems. Temporary aquatic ecosystems, including California vernal pools, are especially sensitive to climatic variation, but most species are adapted to the annual fluctuations in precipitation and temperature. Since vernal pools experience an inundation and desiccation every year, species that occupy the ecosystem have adaptations to this cycle. Many species survive drought by creating resting eggs to then re-emerge upon inundation However, climate changes outside the typical range may have deleterious effects on these populations. Moreover, climate variation can have secondary effects on the community. For example, the amount of precipitation …

Sustaining The Saco Estuary: Final Report 2015, Christine B. Feurt Ph D, Pamela A. Morgan, Mark D. O. Adams, Anna L. Bass, Carrie J. Byron, Michael C. Daley, Michael O. Esty, Noah G. Perlut, Kayla Smith, Tyler Spillane, Michelle M. Steen-Adams, James Sulikowski, Stephan I. Zeeman, Jacob Aman, Michele Dionne, Jeremy Miller, Kristin Wilson

Environmental Studies Faculty Publications

This study focuses on the Saco estuary, the tidal portion of the Saco River, which drains the largest watershed in southern Maine. With headwaters in the White Mountains of New Hampshire, the watershed encompasses more than 4,400 km², and provides clean healthy drinking water to over 100,000 people living and working in communities in southern Maine.

When the study began in 2009, very little was known about the ecology of the Saco estuary. Researchers at the University of New England and the Wells National Estuarine Research Reserve employed the process of collaborative learning to bring together people who …

Discovery And Delimitation: Criconematid Nematodes Of North American Grasslands, Magdalena Jean Olson

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Approximately 200 years ago, North American landscapes were dominated by vast expanses of grassland. The Great Plains, an ecologically complex and diverse ecoregion, extended from Canada to the Gulf of Mexico, and from the Rocky Mountains to the border of the eastern hardwood forest in Indiana. Now the original tallgrass prairie exists in small widely dispersed remnant patches surrounded by agroecosystems. This study is an effort to characterize soil nematode diversity and population structure within those remnant patches. The plant parasitic nematode family Criconematidae serves as our indicator for nematode diversity, due to its global distribution, high abundance in natural …

Mammalian Records From Southwestern Kansas And Northwestern Oklahoma, Including The First Record Of Crawford’S Desert Shrew (Notiosorex Crawfordi) From Kansas, Cody A. Dreier, Keith Geluso, Jennifer D. Frisch, Brittney N. Adams, Alyx R. Lingenfelter, Anthony E. Bridger, Patricia Freeman, Cliff Lemen, Jeremy A. White, Brett R. Andersen, Hans W. Otto, Curtis J. Schmidt

School of Natural Resources: Faculty Publications

Mammalian distributions are constantly changing. Some distributional shifts reflect habitat change, climate change, and human transplantations; thus, such shifts are due to actual expansions or contractions of populations. However, other species ranges that appear to shift as the result of new records being added to known distributional limits actually might reflect populations that previously were undetected due to a lack of past surveys or species that are difficult to detect. In 2013, multiple techniques were employed to document mammalian distributional records in southwestern Kansas and northwestern Oklahoma. We discovered three new county records in Morton County, Kansas (Crawford’s Desert Shrew, …

Increased Harbor Porpoise Mortality In The Pacific Northwest, Usa: Understanding When Higher Levels May Be Normal, Jessica L. Higgins, Stephen A. Raverty, Stephanie A. Norman, John Calambokidis, Joseph K. Gaydos, Deborah A. Duffield, Dyanna M. Lambourn, James M. Rice, Brad Hanson, Kristin Wilkinson, Steven J. Jeffries, Brent Norberg, Lynne Barre

Biology Faculty Publications and Presentations

In 2006, a marked increase in harbor porpoise Phocoena phocoena strandings were reported in the Pacific Northwest of the USA, resulting in the declaration of an unusual mortality event (UME) for Washington and Oregon to facilitate investigation into potential causes. The UME was in place during all of 2006 and 2007, and a total of 114 porpoises stranded during this period. Responders examined 95 porpoises; of these, detailed necropsies were conducted on 75 animals. Here we review the findings related to this event and how these compared to the years immediately before and after the UME. Relatively equal numbers among …

At Home And At Large In The Great Plains: Essays And Memories, Paul A. Johnsgard

Zea E-Books Collection

This volume presents fourteen essays (some updated) that originally appeared in Prairie Fire, a monthly free newspaper that for seven years (as of 2015) has carried important messages of social, environmental, and economic issues in a mature and nonpartisan manner to tens of thousands of residents of Nebraska, western Iowa, eastern Colorado, and southern South Dakota, and by mail to subscribers in the rest of the world. These essays discuss the North American east-west ecological boundaries, spring migration events, birds at the bird feeder, feathered survivors of a glacial past, the threatened sharp-tailed grouse of Nebraska and South Dakota, and …

The Pioneer Of Santa Rosa Island, Andrea Martinez, Michael Perez, Kathryn Mceachern, Sarah Chaney, Ken Niessen

STAR Program Research Presentations

Santa Rosa Island which is part of the Channel Islands in California has a ranching history that goes as far back as the year 1843. While rich in history, the island is no longer “rich” in native plant populations due to the sheep, cattle and other livestock that once occupied the island. As a result of these grazers that the ranchers livelihood depended on, a great disturbance in the native plant population took place. It is up to plants such as Baccharis pilularis, commonly known as Coyote brush, to assist these endangered and threatened plants to once again flourish …

The Characterization Of A Vital Wisconsin Waterway: A Biological Assessment Of The Lower Fox River From 2006-2014, Emily L. Kiehnau

Lawrence University Honors Projects

The Lower Fox River has historically been used as a navigational crossroads, a waste disposal system, and source of hydroelectric power. Over the years, heavy use of the river has negatively affected water quality and the overall health of the system. Unhealthy rivers cannot function properly. Biological assessment based on animal surveys are often used to determine river health. I used data from the Lawrence University and Fox River Navigational System Authority invasive species-monitoring project to explore how the distribution of animals in the Fox River has changed over time and across locations. Monitoring surveys have taken place between June …

Local Patterns In Host-Selection By Anemone Symbionts In Bocas Del Toro, Panama, Samantha Mercer

Undergraduate Honors Theses

The associations made between many symbiotic cleaner shrimps and their host anemone species are influenced by local ecological factors, resulting in regional variations in symbiont-host preferences. These relationships are crucial parts of aquatic ecosystems, and as we face rapid global environmental change, understanding the local patterns of this host specificity will be essential to maintaining healthy marine environments. However, sea anemones, as well as their symbiotic relationships, from the Caribbean coasts of Panama have been poorly studied and are largely under-represented in the current literature. The purpose of this study is to identify the local host-selection patterns, specifically regarding host-size …

Comparing Pseudo-Environmental And Horizontal Plus Pseudo-Environmental Transmission Of A Probiotic Janithinobacterium Lividum Between Green Frog Tadpoles, Stephen Simonetti

Senior Honors Projects, 2010-2019

The gram-negative bacteria, Janthinobacterium lividum (J.liv) is able to kill the pathogenic fungus known as Batrachochytrium dendrobatidis (Bd), which is known to be causing massive amphibian decline worldwide. The purpose of this research was to identify the ability of the probiotic bacteria, Janthinobacterium lividum (J.liv), to be horizontally transmitted from individual to individual and/or pseudo-environmentally transmitted from individual to environment and back to individual between Lithobates clamitans (green frog) tadpoles. Based on previous findings I hypothesized that pseudo-environmental and horizontal transmission will occur in tadpoles. This would be important for helping stop the decline of amphibians because it would provide …

Using Capture-Mark-Recapture Techniques To Estimate Detection Probabilities & Fidelity Of Expression For The Critically Endangered James Spinymussel (Pleurobema Collina)., Alaina C. Esposito

Masters Theses, 2010-2019

The critically endangered James Spinymussel (Pleurobema collina) is a species of freshwater mussel endemic to Virginia’s James and Dan River basins. In the last 20 years, P. collina has experienced a substantial decline in numbers and currently occupies approximately 10% of its original habitat; however, little information is known about this species to assist in conservation. A 230-meter reach of transitional habitat in Swift Run was selected for repeat observations to estimate detection probabilities using a Capture-Mark-Recapture framework. In June 2014, visual scouting began to locate and tag P. collina (including other mussels in the community) with PIT …

White-Tailed Deer (Odocoileus Virginianus) Fawn Risk From Gray Wolf (Canis Lupus) Predation During Summer, L. David Mech, Aaron Morris, Shannon M. Barber-Meyer

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Little is known about how often various prey animals are at risk of predation by Gray Wolves (Canis lupus). We used a system to monitor the presence during the day of two radio-collared Gray Wolves within 2 km of a radio-collared White-tailed Deer (Odocoileus virginianus) with a fawn or fawns in August 2013 in the Superior National Forest of northeastern Minnesota. We concluded that the fawn or fawns were at risk of predation by at least one wolf at least daily.

2015 Academic Program Review School Of Natural Resources University Of Nebraska–Lincoln

School of Natural Resources: Documents and Reviews

No abstract provided.

Riqueza De Helmintos Parásitos De Vertebrados Silvestres Del Estado De Hidalgo, México, Jorge Falcón-Ordaz, Scott Monks, Griselda Pulido-Flores, Luis García-Prieto, Georgina Lira-Guerrero

Estudios en Biodiversidad

La diversidad de helmintos parásitos de vertebrados del estado de Hidalgo, en México es poco conocida, a pesar de que su estudio se inició desde 1937. Asimismo, mucha de la información generada se ha publicado de manera dispersa, lo que dificulta aún más el establecer con precisión los valores actuales. Por ello, el objetivo de este trabajo fue determinar la riqueza de la fauna helmintológica asociada a vertebrados silvestres de Hidalgo. Para alcanzar dicho objetivo, se realizaron tres acciones: 1) recopilación bibliográfica retrospectiva de información; 2) consulta al acervo de diversas colecciones científicas nacionales e internacionales, e 3) incorporación de …

Calidad Del Agua En La Subcuenca Fluvial La Garita, Acapulco, Guerrero Por Monitoreo Con Insectos, Ana Yolanda Rosas-Acevedo, Audel Sánchez-Infante, José Luis Rosas-Acevedo

Estudios en Biodiversidad

La subcuenca La Garita (Región Hidrológica: Rh19Ac) ha sufrido la influencia del hombre, presenta escorrentía y momentos de estiaje, además de puntos aislados de contaminación por basura y descargas. Se realizó un monitoreo de insectos. Se exploró la posibilidad del uso del índice BMWP (Biological Monitoring Working Party), para arroyos y ríos, en la determinación de la calidad del agua y del ecosistema. En la parte alta o cabecera (BMWP=122) correspondió a excelente (ecosistema no impactado), en la zona media o de transferencia (BMWP-CR=118) fue buena (ecosistema no alterado de manera sensible) y en la parte baja o zona de …

Problemática De Contaminación En La Zona Agrícola De La Reserva De La Biosfera Barranca De Metztitlán, Hidalgo, México, Maritza López-Herrera, Leticia Romero-Bautista, Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Amelia Portillo-López

Estudios en Biodiversidad

El presente trabajo se generó con el objetivo de dar a conocer la problemática que existe actualmente en una zona agrícola de gran importancia en el estado de Hidalgo, la “Vega de Metztitlán”, zona que forma parte de la Reserva de la Biosfera Barranca de Metztitlán, sitio declarado como reserva federal. El aporte de agua residual que se hace a través de los acuíferos que irrigan a la zona, ha generado que este sitio se vea expuesto a un gran riesgo de contaminación por metales pesados, hidrocarburos y demás contaminantes, los cuáles quedan biodisponibles para las plantas e indirectamente existe …

Los Hongos Poliporoides De La Subcuenca Del Río Metztitlán, Hidalgo, México, Leticia Romero-Bautista, Miguel Ángel Islas-Santillán, Maritza López-Herrera, Nahara Ayala-Sánchez, Irma Estela Soria-Mercado, Amelia Portillo-López, Tania Raymundo-Ojeda, Ricardo Valenzuela-Garza

Estudios en Biodiversidad

Los hongos poliporoides son excelentes descomponedores de la madera, aunque también hay ectomicorrizógenos; su importancia ecológica radica en que ayudan a mantener el equilibrio del ciclo del carbono en la naturaleza. Además presentan potencial biotecnológico dadas sus características nutrimentales, medicinales y degradadoras, por su capacidad de producir metabolitos secundarios y ser potencialmente cultivables. Se analiza la importancia del impacto ambiental en los ecosistemas de la subcuenca del río Metztitlán y la diversidad de este grupo de hongos asociados a ellos. Se revisaron ejemplares de herbario y se realizaron exploraciones micológicas en 13 comunidades vegetales de 11 municipios, y 37 localidades …

Indicadores Bióticos De Calidad Ambiental Del Sur Del Estado De Tamaulipas, México. Caso De Estudio: Aves, René Bernardo Elías Cabrera-Cruz, Marco Antonio González-González, Julio César Rolón-Aguilar, Juan Carlos Gaytán-Oyarzún

Estudios en Biodiversidad

Este trabajo plantea una evaluación de prioridad biológica para la conservación de aves en la región sur de Tamaulipas, México. La metodología empleada fue la técnica Evaluación Rápida de Prioridad Biológica (ERPBIO). Esta permite determinar las principales zonas y grupos a conservar en flora y fauna para amplias zonas de estudio de manera rápida y precisa. La región sur de Tamaulipas comprende los municipios de Aldama, Altamira, Ciudad Madero, González y Tampico, con una superficie total de 8,969.05 km2. Dentro de los resultados obtenidos se elaboró una base de datos por municipio, encontrando una amplia cantidad de estudios con un …

La Biodiversidad De Los Hongos Ectomicorrízicos Y Su Importancia Para La Conservación Del Bosque En La Zona Poblana Del Parque Nacional Malintzi, Marco Antonio Marín-Castro, Virginia Silva-Díaz, Gladys Linares-Fleites, Ana María Castagnino, José Antonio Ticante-Roldán

Estudios en Biodiversidad

El Parque Nacional Malintzi comprende una superficie de 45,852 hectáreas, de las cuales corresponden 14,544 al estado de Puebla. El deterioro a su riqueza forestal tiene sus inicios desde la época colonial y hasta nuestros días la presión sobre los recursos de este parque nacional aumenta debido a que los pobladores de la zona, tradicionalmente ven en la montaña su fuente de sustento mediante la agricultura y la extracción de madera, que aunadas a la tala clandestina inmoderada, han influido drásticamente en la pérdida de biodiversidad y cambio de uso del suelo. Los objetivos de este trabajo fueron describir la …

Los Hongos Agaricales De Las Áreas De Encino Del Estado De Baja California, México, Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Leticia Romero-Bautista, Maritza López-Herrera, Roxana Rico-Mora, Amelia Portillo-López

Estudios en Biodiversidad

Se realizó una recopilación de las especies de hongos del orden Agaricales (regionalmente conocido como “agaricoides”) de los bosques Quercus spp. de la península de Baja California (México), con la pretensión de contar con un panorama de la diversidad de este grupo taxonómico en el área, su distribución y dinámica dentro de estos ecosistemas y el papel ecológico de cada una de las especies citadas. Para la realización del presente estudio se reunió la información obtenida de las especies recolectadas de las diferentes localidades de las áreas de encino del estado de Baja California desde 1996 hasta el presente, ejemplares …

Los Agaves Mezcaleros Del Altiplano Potosino Y Zacatecano, Edgar León Esparza-Ibarra, Juan Violante-González, Scott Monks, Jorge Cadena Iñiguez, Cuauhtémoc Araujo-Andrade, Erich Dietmar Rössel-Kipping

Estudios en Biodiversidad

En el Altiplano Potosino y Zacatecano, los agaves mezcaleros son un componente socioeconómico importante ya que se pueden aprovechar desde el punto de vista económico, ya que tiene valor en el mercado para la producción de bebidas espirituosas como el mezcal; social, ya que su producción y modo de empleo genera jornales disminuyendo la migración; en la salud, por la producción de aguamiel, jarabes e inulinas como complemento nutricional; científico, por los aportes al conocimiento en la variación biológica de los agaves; debido a la diversidad y su plasticidad para enfrentar temperaturas extremas y sequías prolongadas, entre otros. Es por …

El Arbolado De Los Espacios Públicos Abiertos De La Zona De Monumentos Del Centro Histórico De La Ciudad De Puebla, Víctor Gutiérrez-Pacheco, Sonia Emilia Silva-Gómez, José Silvestre Toxtle-Tlamani, J. Santos Hernández-Zepeda

Estudios en Biodiversidad

Los conglomerados humanos, presentan espacios públicos abiertos (EPA´s), sobre todo arbolados, con funciones estéticas, sociales y ambientales. Se requiere información e indicadores con un enfoque ecológico, para que su atención descanse sobre una planeación documentada. Así, se pretende conocer la composición arbórea, su distribución y la biodiversidad en los Espacios Públicos Abiertos (EPA´s) de la Zona de Monumentos del Centro Histórico de la Ciudad de Puebla (ZMCHP). Por tanto, se contaron los especímenes, se ubicaron en los EPA´s y se identificaron. Para determinar la biodiversidad se aplicó el Índice de Diversidad de Shannon-Wiener (H´). En 25 EPA´s, se censaron 1,120 …

The Problem Of Low Agreement Among Automated Identification Programs For Acoustical Surveys Of Bats, Cliff Lemen, Patricia W. Freeman, Jeremy A. White, Brett R. Andersen

School of Natural Resources: Faculty Publications

We compared four programs designed to identify species of bats from their echolocation calls (Bat Call ID, EchoClass, Kaleidoscope Pro, and SonoBat) using field data collected in Nebraska, USA (29,782 files). Although we did not know the true identity of these bats, we could still compare the pairwise agreement between software packages when identifying the same call sequences. If accuracy is high in these software packages, there should be high agreement in identification. Agreement in identification by species averaged approximately 40% and varied by software package, species, and data set. Our results are not consistent with the high accuracy often …

Examining The Impacts Of Valley Fills In Stream Ecosystems On Amphibian And Aquatic Insect Communities In Southeastern Kentucky, John Clayton Bourne

Online Theses and Dissertations

Chapter 1. Abstract: Biodiversity is not evenly distributed, and understanding factors that determine spatial patterns of species diversity remains a key question in ecology. Because of their relatively high abundance and complex life cycles, stream salamanders and aquatic insects are important trophic links and serve a critical role in transferring energy. Despite this importance little research has examined their community structure simultaneously in aquatic ecosystems. The primary objective of this research was to determine the structure of these communities across natural areas of southeastern Kentucky and understand what factors impact their abundances and distributions. To address this, we sampled eight …