Terrestrial and Aquatic Ecology Commons^™

Fisheries Occasional Publication No.057 - Introduced Marine Species In Western Australia, Department Of Fisheries Western Australia

Fisheries Occasional Publications

As the largest State in Australia, Western Australia (WA) has a long and relatively pristine coastline that stretches over 12,500 km, or over 20,700 km if the State’s 3,747 islands are included. The coast ranges over 20 degrees of latitude from the temperate south coast to the northern tip of the tropical Kimberley. There are a wide variety of coastal marine habitats in this vast area. The south coast has extensive white sandy beaches interspersed with granite headlands. A diverse range of nearly 800 species of temperate marine algae, or seaweeds, occurs in the area. With 26 species, the seagrasses …

Distribution Of Woodland Salamanders Of The Valley And Ridge In West Virginia, H. Reid Downer

Theses, Dissertations and Capstones

Two terrestrial woodland salamanders of the genus Plethodon, P. punctatus and P. virginia, are endemic to the Valley and Ridge Physiographic Province in West Virginia and Virginia and occupy limited geographic ranges. Two common and widespread species, P. cylindraceus and P. cinereus, also inhabit this region. To evaluate the distribution and habitat of these terrestrial salamanders I surveyed wooded ridges and slopes throughout the geographic range of the two endemic species by conducting daytime cover object searches and nocturnal visual encounter surveys. From March through November 2008, I recorded the presence of 321 woodland salamanders at 91 sites. I used …

Characterization Of 24 Microsatellite Loci In Delta Smelt, Hypomesus Transpacificus, And Their Cross-Species Amplification In Two Other Smelt Species Of The Osmeridae Family, Kathleen M. Fisch, Jessica Lynn Petersen, Melinda R. Baerwald, John K. Pedroia, Bernie May

Department of Animal Science: Faculty Publications

We characterized 24 polymorphic tetranucleotide microsatellite loci for delta smelt (Hypomesus transpacificus) endemic to the San Francisco Bay Estuary, California, USA. Screening of samples (n = 30) yielded two to 26 alleles per locus with observed levels of heterozygosity ranging from 0.17 to 1.0. Only one locus deviated from Hardy–Weinberg equilibrium, suggesting these individuals originate from a single panmictic population. Linkage disequilibrium was found in two pairs of loci after excluding the locus out of Hardy–Weinberg equilibrium. Twenty-two primer pairs cross-amplified in wakasagi smelt (Hypomesus nipponensis), and 15 primer pairs cross-amplified in longfin smelt ( …

Assessment Of River Herring And Striped Bass In The Connecticut River: Abundance, Population Structure, And Predator/Prey Interactions, Justin P. Davis, Eric T. Schultz, Jason Vokoun

EEB Articles

Populations of anadromous alewife Alosa pseudoharengus and blueback herring A. aestivalis, collectively referred to as river herring, have declined in the Connecticut River. An explanatory hypothesis for these declines is that predation pressures have increased as a result of recent increases in abundance of sympatric striped bass Morone saxatilis. We sampled river herring and striped bass from the stretch of the Connecticut River between Wethersfield, CT and Holyoke, MA during the vernal migration seasons of 2005-2008. The objectives of the sampling program were to assess abundance, temporal/spatial distribution, and population structure of both river herring and striped bass, …

Estimating Predation On Declining River Herring: Tag-Recapture Study Of Striped Bass In The Connecticut River, Eric T. Schultz, Justin P. Davis, Jason Vokoun

EEB Articles

Populations of anadromous alewife Alosa pseudoharengus and blueback herring Alosa aestivalis, collectively referred to as river herring, have declined in the Connecticut River. A hypothesis for why river herring have declined is that predation pressures have increased associated with recent increases in abundance of striped bass Morone saxatilis. Information on striped bass abundance, size structure, and consumption rates are required to test this hypothesis. This study was designed to provide estimates of striped bass population size in the Connecticut River during the spring migration season, via an intensive mark-recapture exercise and either an open or robust mark-recapture model. …

The Amphipod Orchomenella Pinguis — A Potential Bioindicator For Contamination In The Arctic, Lis Bach, Valery E. Forbes, Ingela Dahllöf

Valery Forbes Publications

Indigenous organisms can be used as bioindicators for effects of contaminants, but no such bioindicator has been established for Arctic areas. Orchomenella pinguis is a benthic amphipod, ubiquitous in the Arctic and can be found in high numbers. We collected O. pinguis at sites with different contamination levels. Population characteristics (body length distribution, average dry weight and amphipod organic content) were related to sediment contaminant concentrations, in order to identify suitable endpoints for using this species as a bioindicator. We show that O. pinguis was prevalent in both clean and contaminated areas, easy to sample and that its population characteristics …

Unintended Facilitation Between Marine Consumers Generates Enhanced Mortality For Their Shared Prey, F. Joel Fodrie, Matthew D. Kenworthy, Sean P. Powers

University Faculty and Staff Publications

We manipulated predator densities and prey vulnerability to explore how interactions between two predators affect overall mortality of their shared prey. Our threemember study system included eastern oysters (Crassostrea virginica) and two of its major consumers: southern oyster drills (Stramonita haemastoma) and stone crabs (Menippe adina). Field experiments demonstrated that drills and crabs foraging together generated higher than expected oyster mortality based on each species operating independently, even though crabs also killed some drills. In subsequent laboratory trials, we experimentally mimicked the handling of oysters by foraging crabs and confirmed that crabs facilitated drills by breeching oyster valves, thereby granting …

Fisheries Occasional Publication No.72 - Western Rock Lobster Ecological Effects Of Fishing Research Plan., Rhys Brown

Fisheries Occasional Publications

The commercial West Coast Rock Lobster Fishery (WCRLF) targets the western rock lobster (WRL), Panulirus cygnus, averaging approximately 10,000 tonnes of lobsters each year. Currently approximately 450 to 500 boats operate in the Fishery in waters ranging from 5 m to 200 m depth adjacent to the Western Australian coast and stretching from Cape Leeuwin in the south to Shark Bay in the north. The Fishery is managed by the Department of Fisheries (DoF) in Western Australia, using an input control system designed to constrain exploitation/fishing effort and deliver sustainable catches. The annual value of the catch is estimated at …

Prey Selectivity Of Planktivorous Fish: Analysis Of Stomach Contents In Four Pomacentrids At Lizard Island, Great Barrier Reef, James O'Hare

Independent Study Project (ISP) Collection

Coral reef planktivores are important to coral reefs by concentrating and delivering nutrients and allochthonous carbon from the plankton to reef building corals. In an otherwise very oligotrophic system this function may be of major importance. Planktivorous Damselfish (Pomicentridae) were analysed for prey selectivity through enumeration of stomach contents. Simultaneous plankton tows were conducted to establish the plankton community composition of the waters they were taken from. There was a statistically significant variation between the stomach composition and that of the water column. While there was not a significant difference among Simpson’s diversity indices of the stomach contents, there was …

Terrestrial Habitat Use Of Marbled Salamanders Ambystoma Opacum: A Site Specific Approach, Frank Piccininni

Theses, Dissertations and Capstones

Habitat destruction, fragmentation and degradation have contributed heavily to the decline of amphibian populations such as Marbled Salamanders (Ambystoma opacum). Often, ambystomatid water resources are conserved without consideration for the equally important terrestrial habitat. This is partly due to a lack of information regarding the relationship between ecological succession, plant community composition, microhabitat and salamander abundance. Three sampling transects consisting of drift fence arrays, vegetation assessments and microhabitat surveys were extended 100 m into the terrestrial habitat surrounding a seasonal wetland at Beech Fork State Park in Wayne County, West Virginia. Principal components analysis was used to identify …

Determining Winter Flounder Spawning Sites In Two Connecticut Estuaries, Eric T. Schultz, Jose J. Pereira, Peter J. Auster

EEB Articles

Winter flounder (Pseudopleuronectes americanus) come inshore during the late winter and early spring to lay their eggs in shallow bays and estuaries along the coast. Unlike most fish eggs, which are buoyant, these eggs are demersal and sink to the seafloor. This makes them vulnerable to burial from various types of natural and human caused disturbances (e.g., storms, mobile fishing gear, maintenance dredging). Our objective was to map spawning areas in two harbors and search for generalities among these sites that would allow us to predict where winter flounder might spawn in other areas. This would allow managers to avoid …

A Study Of The Genus Desmognathus In West Virginia, With Emphasis On Desmognathus Welteri, The Black Mountain Salamander, Tristan Bond

Theses, Dissertations and Capstones

The Black Mountain Salamander, Desmognathus welteri, is listed as S2 by the WVDNR. Given the threat of extirpation, this species is in need of studies to facilitate a conservation effort. The following studies were completed as part of this work: Comparative morphology of the genus Desmognathus in West Virginia; Distribution of D. welteri in West Virginia; Habitat partitioning of Desmognathine salamanders; and Phenology of Desmognathus spp. Ratios of morphometrics of the tail were found to be most useful for distinguishing Desmognathus spp. D. welteri was found in three of 22 streams searched, meaning there are now 21 documented occurrences of …

Evaluation Of Habitat Enhancement Structure Use By Spotted Bass, Stanley L. Proboszcz, Christopher S. Guy

The Prairie Naturalist

Habitat enhancement is a common and effective method used to positively influence fish populations. However, there is a paucity of speciesspecific evaluations of stream habitat enhancement structures for warmwater fishes. We evaluated use of half-log, rootwad enhancement structure, and simulated undercut bank (LUNKERS) by adult and juvenile spotted bass (Micropterus punctulatus) in natural and experimental streams. Enhancement structures were installed in Otter Creek, Kansas. Adult spotted bass use of natural and enhancement structure was documented weekly during summer and fall of 2001 and 2002 with radiotelemetry. Mean total length (TL) of adult fish was 292 mm (SE = …

Anadromous Rainbow Smelt And Tomcod In Connecticut: Assessment Of Populations, Conservation Status, And Need For Restoration Plan, Heather A. Fried, Eric T. Schultz

EEB Articles

(beginning of rainbow smelt executive summary)

Evidence indicates that anadromous rainbow smelt (Osmerus mordax) populations in Connecticut and elsewhere in the northeast United States have severely declined. Several sampling programs have documented declines in Connecticut’s smelt populations over the last three decades (Marcy 1976a, Marcy 1976b, Millstone Environmental Laboratory 2005). Similar declines have also been documented in the Hudson River (ASA Analysis & Communication 2005) and in Massachusetts (personal communication, Brad Chase, MA Division of Marine Fisheries 2004). Recreational and commercial fisheries in the region for this species have virtually ceased (Blake and Smith 1984). The Connecticut Fish Advisory Committee …

The Effects Of Nitrate Levels On The Response Of Pimephales Promelas To Conspecific Chemical Alarm Cues, Lucas J. Borgstrom

Honors Capstones

Capstone submitted as a graduation requirement for the BSU Honors Program.

Assessment Of Anadromous Alewife And Blueback Herring Populations In Connecticut Coastal Streams And Connecticut River Tributaries, Justin P. Davis, Eric T. Schultz

EEB Articles

Alewife (Alosa pseudoharengus) and blueback herring (A. aestivalis) occur in anadromous populations that have a largely overlapping distribution from Florida to Newfoundland (Loesch 1987). Anadromous populations of these species are commonly collectively referred to as “river herring”. Adults inhabit coastal shelf waters until sexual maturity is reached at age 3-5 (Neves 1981). Sexually mature individuals make spawning migrations, commonly referred to as “runs”, into freshwater systems during spring months (Loesch 1987). Spawners can survive and return to spawn in subsequent years (Mullen et al. 1986). Juveniles reside in freshwater for 3-7 months, at which time they undertake a gradual migration …

The Natural History And Thermal Ecology Of A Population Of Spotted Turtles (Clemmys Guttata) And Wood Turtles (Glyptemys Insculpta) In West Virginia, Ariana N. Breisch

Theses, Dissertations and Capstones

An ecological study was conducted from 19 March 2001 to 2 April 2003 on a population of Spotted Turtles (Clemmys guttata) and Wood Turtles (Glyptemys insculpta) in West Virginia. Live-trapping, mark-recapture, radio telemetry and temperature data logging techniques were used to gather information on morphometrics, capture success, movements, home range, behavior, and thermal regime during activity and over-wintering seasons. Twenty-one Spotted Turtles were captured 260 times. Population structure was 42.9% juvenile, 38.1% male, and 19.0% female. Mean home range was 0.52 ha. Fifty Wood Turtles were captured 230 times. Juveniles were 36%, and males and females were 32% each. Mean …

Constructed Ponds As Mitigated Habitat For The Wood Frog (Rana Sylvatica Leconte) And The Spotted Salamander (Ambystoma Maculatum Shaw) In West Virginia, Celeste Dawn Good

Theses, Dissertations and Capstones

Many forest dwelling amphibians depend upon aquatic breeding habitats, making them susceptible to habitat changes. To determine if amphibian use of temporary pools occurred, 9 ponds were constructed in 3 forested areas on the MeadWestvaco Wildlife and Ecosystem Research Forest. Studies were conducted in 6 ponds during 2004, and all 9 in 2005 using drift fences. Trapped amphibians were measured and given a pond specific mark with visible implant elastomers. A significant difference was found between low and high elevation sites for juvenile R. sylvatica snout-to-vent length. No significant differences were found for soil, air or water temperatures between sites …

Proceedings Of The Western Australian Dhufish Workshop 2004, Mark Pagano, Terry Fuller

Fisheries Occasional Publications

The Western Australian Dhufish Workshop 2004 was a joint project between Recfishwest and the Western Australian Department of Fisheries.

The workshop incorporated presentations from the Department of Fisheries, Recfishwest, the Western Australian Fishing Industry Council, Murdoch University and Challenger TAFE to showcase current knowledge relating to the iconic dhufish in Western Australia. The perspectives of a recreational fisher, a commercial wetline operator and a metropolitan charter boat operator were also presented.

Through information sharing and discussion the workshop provided a platform to better understand the fundamental issues that underpin current and future management arrangements for this valuable resource. Both commercial …

Fisheries Occasional Publication No. 33 - Department Of Fisheries Community Survey 2005, Tara Baharthah

Fisheries Occasional Publications

A telephone survey of the Western Australian public was conducted to assess the level of success of programs implemented by the Department of Fisheries. The sample comprised of 700 interviews, 422 in the metropolitan area and 278 in regional areas throughout the State.

This community survey was used to determine the level of recall and awareness of the Department of Fisheries, the understanding and support of the community for the Department of Fisheries' management strategies and to examine key aspects of community participation in recreational fishing.

It is estimated that the overall participation rate for recreational fishing in Western Australia …

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-24, Supplement I - Missouri River Creel Survey, Camp Creek To Kansas State Line, 1 April Through 13 October 2006., Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 29 March through 10 October 2003. This is the fourth of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 30,000 hours fishing the Missouri River from Camp Creek (rk 883.5) to the Kansas state line (rk 790.2) during the survey period. Effort peaked during the …

Fisheries Occasional Publication No. 29 - Western Rock Lobster Fishery Effects Of Fishing On The Ecosystem - Scientific Reference Group (Chairman's Report No. 3, February 2005), Department Of Fisheries, Western Australia

Fisheries Occasional Publications

The Western Rock Lobster Effects of Fishing on the Ecosystem Scientific Reference Group (the SRG) was convened jointly by the Department of Fisheries and the WA Fishing Industry Council (WAFIC). The SRG met on Tuesday 1 February 2005 at the Fremantle Sailing Club, and this document is the official report from that meeting.

Fisheries Occasional Publication No. 32 - Allocation Of The Western Australian Abalone Resource Between User Groups, Department Of Fisheries Western Australia

Fisheries Occasional Publications

In this submission to the Integrated Fisheries Allocation Advisory Committee (IFAAC), the Department will outline what it believes are the most practical and cost effective ways of managing a system for allocating the abalone resource between the commercial, customary and recreational sectors.

In preparing this submission, it has been noted that because of the limited data on recreational catch outside of the metropolitan area, the Sustainable Harvest Limit (SHL) set for the fishery relates only to the area that is equivalent to Area 7 of the commercial fishery. Further, it is acknowledged that the Minister has approved that proportional catch …

Differences In Pah Tolerance Between Capitella Species: Underlying Biochemical Mechanisms, Lis Bach, Annemette Palmqvist, Lene Juel Rasmussen, Valery E. Forbes

Valery Forbes Publications

The polychaete Capitella capitata consists of a species complex within which differences in tolerance to tox­icants have been observed. For example, it has been shown that Capitella sp. S is more sensitive (e.g., in terms of survival, growth and reproduction) to PAH and other stressors than the more opportunistic Capi­tella sp. I, which is able to take up and biotransform the PAH fluoranthene (Flu). In the present study, an in­vestigation was performed to examine whether differences in tolerance between Capitella species sp. I and sp. S are due to differences in biotransformation, measured as the amount of Flu-metabolites produced by …

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 3 April Through 29 May 2004, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

The Nebraska Game and Parks Commission's strategic plan has stated the following management goal for the Missouri River: Restore, protect, and maintain the diversity of historic Missouri River habitats, resources, and ecosystem functions in order that present and future generations may enjoy consumptive and non-consumptive outdoor recreational opportunities (NGPC 1996). To accomplish this goal the Nebraska Game and Parks Commission identified the following five objectives: • To restore terrestrial and aquatic floodplain habitat types by 2008. This would include old oxbows, chutes, side channels, sand bars, backwaters, wetlands, and other shallow water habitats. To restore ftows that reflect the natural …

Fisheries Occasional Publication No.21 - Allocation Of The Western Rock Lobster Resource Between User Groups, Department Of Fisheries Western Australia

Fisheries Occasional Publications

In this submission to IFAAC, the Department will outline what it believes are the most practical and cost effective ways of managing a system of allocation amongst the commercial, customary and recreational sectors. This recommendation recognises that cost efficiencies and outcomes will be greatly affected by the type of allocation model that is chosen. Consequently the Department recommends that the allocation system should be based on a single allocation to each sector that is available over the entire fishery.

The Department does not recommend having any finer scale zoning of the allocations, or the creation of exclusive recreational fishing areas. …

Nebraska Catfish Anglers: Descriptions And Insights Derived From The 2002 Nebraska Licensed Angler Survey, Keith Hurley, Kristin Duppong-Hurley

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

Analyses in this report will refer to number of different groups. Catfish seeking anglers are defined as any angler who has spend at least 1 trip during 2002 in pursuit of a catfish species (channel, blue, flathead, or bullhead). This is the most general group included in the analyses and is also the least avid group of anglers in regards to their relationship to catfish angling. Catfish anglers are defined as those respondents who identified a catfish species as the species they most prefer to target. Catfish anglers represent a smaller group of respondents with a higher avidity for catfish …

Fisheries Research Contract Report No. 12 - Mitigation Of The Negative Impacts On Biodiversity And Fisheries Values Of The Refurbishment Of Waroona Dam, South-Western Australia (Final Report For The Water Corporation Of Western Australia), Brett Molony, Stephen Beatty, Chris Bird, Vinh Nguyen

Fisheries Research Contract Reports

In addition to the supply of water for agriculture, irrigation dams of south-western Australia are important systems for recreational activities, including fishing (Molony & Bird 2002, Molony et al. 2002a). Lake Navarino (the reservoir created by Waroona Dam, figures 1 and 2, approx. 115° 55 E 32° 51 S) is the first major public access reservoir south of the Perth Metropolitan Area and is an important component of the Recreational Marron (Cherax tenuimanus') Fishery (RMF) (Molony 2001a, 2002a, 2003a, Molony & Bird 2002, Beatty et al. 2003a). Further, it is the most northerly irrigation dam that is regularly stocked with …

Fisheries Occasional Publication No.15 - A Unit Register For Commercial Fisheries: An Issues Paper, Western Rock Lobster Council, Department Of Fisheries Western Australia

Fisheries Occasional Publications

This paper is designed to encourage stakeholder involvement in a review of the existing Department of Fisheries' Register, and development of a concept for a new Unit 1 Register, under the Fish Resources Management Act 1994 (FRMA). It is not a fisheries management proposal but a proposal dealing with the facilitation of the fishing licence business. Comments are sought from all stakeholders, including commercial fishers, recreational fishers, banks, accountants, lawyers, third party investors and brokers.

The comments gathered through the responses to this 'issues paper' will form the basis for the Unit Register Working Group to develop the concept of …

Habitat Analysis By Hierarchical Scheme And Stream Geomorphology, James B. Spence

Theses, Dissertations and Capstones

A study was undertaken to classify eight stream reaches in the North Branch of the Potomac River watershed and determine if geomorphologic differences influenced the availability of fish habitat structure and fish density. Stream reaches were classified using Rosgen Level II (1996) methods, and fish habitat was determined using Hydraulic Channel Unit (HCU) classification based on a method modified from Bisson et al. (1982). Other habitat variables were also studied such as stream shading and physical habitat based on the Rapid Bioassessment Protocol (Barbour et al. 1999). Despite the differences in HCU density between sites, HCU density did not influence …