Terrestrial and Aquatic Ecology Commons^™

Understanding Metrics Of Stress In The Context Of Invasion History: The Case Of The Brown Treesnake (Boiga Irregularis), Natalie Claunch, Ignacio Moore, Heather L. Waye, Laura Schoenle, Samantha J. Oakey, Robert N. Reed, Christina Romagosa

Biology Publications

Invasive species can exert rapid depletion of resources after introduction and, in turn, affect their own population density. Additionally, management actions can have direct and indirect effects on demography. Physiological variables can predict demographic change but are often restricted to snapshots-in-time and delayed confirmation of changes in population density reduces their utility. To evaluate the relationships between physiology and demography, we assessed metrics of individual and demographic stress (baseline and 1-h corticosterone (CORT), body condition and bacterial killing ability) in the invasive snake Boiga irregularis on Guam collected in intervals of 10–15 years. We also assessed potential discrepancies between different …

Small Unmanned Aircraft Systems Acoustic Analysis For Noninvasive Marine Mammal Response: An Exploratory Field Study, David Thirtyacre, Gennifer Brookshire, Sarah Callan, Brittany Arvizu, Patrick Sherman

International Journal of Aviation, Aeronautics, and Aerospace

As in countless other fields of human endeavor, small unmanned aircraft systems (sUAS) have the potential to benefit pinniped (Pinnipedia; e.g., Phocidae [seals], Otariidae [sea lions], and Odobenidae [walruses]) response efforts. The employment of sUAS could give responders a close-up look at animals in distress in order to determine their condition as well as develop a response strategy. However, unlike other subjects that are regularly inspected by sUAS (e.g., croplands and civil infrastructure) pinnipeds may respond to the distinctive sound generated by small, multirotor sUAS. This reaction may include retreating into the water en masse, which could put …

Salad With Clams: Prey Choice Of An Intentionally Carnivorous Turtle, Kayleigh R. Erazmus, Luca Luiselli, Russell L. Burke

Biology Faculty Publications

Prey choice is the non-random foraging and consumption of prey species by their predators, and is therefore the basis for studies of topics as diverse as quantifying food webs, predator–prey relationships, and optimal-foraging models. Malaclemys terrapin (Diamond-back Terrapin) is a diet generalist with a large geographic distribution: the US Atlantic and Gulf coasts from Massachusetts to Texas. Individual terrapins have relatively small home ranges and feed primarily on local mollusc species. In feeding trials with 1 prey species and 2 prey species, wild-caught terrapins from New York readily consumed Mya arenaria (Soft-shelled Clam) and Geukensia demissa (Atlantic Ribbed Mussel), preferring …

A Spatiotemporal Assessment Of Fish Assemblage Response To Land-Use Change And The Evaluation Of Edna Metabarcoding For Describing Diverse Fish Communities, Timothy M. Owen

Theses and Dissertations

Fish assemblages are often assessed as a biological proxy for environmental health. While humans value healthy environments for the ecosystem services and recreational opportunities they provide, it is increasingly evident that such resources can be paradoxically degraded by anthropogenic activities. In this investigation, we studied the relationship between different intensities of anthropogenic land-use change and habitat-driven fish assemblage response across multiple spatiotemporal scales. Secondarily, we explored the efficacy of eDNA metabarcoding against conventional electrofishing techniques for the purpose of describing complete fish communities. This study was conducted in the Tuckahoe Creek basin near Richmond, Virginia. This James River tributary serves …

Core Commitments For Field Trials Of Gene Drive Organisms, Kanya C. Long, Luke Alphey, George J. Annas, Cinnamon S. Bloss, Karl J. Campbell, Jackson Champer, Chun-Hong Chen, Amit Choudhary, George M. Church, James P. Collins, Kimberly L. Cooper, Jason A. Delborne, Owain R. Edwards, Claudia I. Emerson, Kevin Esvelt, Sam Weiss Evans, Robert M. Friedman, Valentino M. Gantz, Fred Gould, Sarah Hartley, Elizabeth Heitman, Janet Hemingway, Hirotaka Kanuka, Jennifer Kuzma, James V. Lavery, Yoosook Lee, Marce Lorenzen, Jeantine E. Lunshof, John M. Marshall, Philipp W. Messer, Craig Montell, Kenneth A. Oye, Megan J. Palmer, Philippos Aris Papathanos, Prasad N. Paradkar, Antoinette J. Piaggio, Jason L. Rasgon, Gordana Rašić, Larisa Rudenko, J. Royden Saah, Maxwell J. Scott, Jolene T. Sutton, Adam E, Vorsino, Omar S. Akbari

United States Department of Agriculture Wildlife Services: Staff Publications

We must ensure that trials are scientifically, politically, and socially robust, publicly accountable, and widely transparent.

Gene drive organisms (GDOs), whose genomes have been genetically engineered to spread a desired allele through a population, have the potential to transform the way societies address a wide range of daunting public health and environmental challenges. The development, testing, and release of GDOs, however, are complex and often controversial. A key challenge is to clarify the appropriate roles of developers and others actively engaged in work with GDOs in decision-making processes, and, in particular, how to establish partnerships with relevant authorities and other …

Blenny Territoriality At Oyster Landing, North Inlet Estuary, South Carolina: Seasonal Patterns And Ecological Factors, Sydney Davis, Juliana Harding

Honors Theses

Temperate oyster reef blennies use oyster shells that are still articulated as habitat year round. During the breeding season when water temperatures are > 18-20°C, many species of blenny males use the oyster valves as nesting sites. Male blennies exhibit territorial behavior when guarding their nesting sites and can interact differently with conspecific and transient species. Striped blenny (Chasmodes bosquianus) and freckled blenny (Hypsoblennius ionthas) behavior was described from April 2020 to August 2020 at Oyster Landing, North Inlet estuary, South Carolina to quantify typical blenny behavior, general presence or absence of residents, and potential environmental parameters …

Infaunal Bivalve Density And Richness In North Inlet Estuary, South Carolina: Seasonal Patterns And Ecological Factors, Valerie M. Knowles, Juliana Harding

Honors Theses

Estuarine bivalves recruit to benthic habitats after the larvae are in the planktonic stage. The observed infaunal bivalve density relates to larval supply from adult reproduction during warmer months as well as larval and juvenile mortality post-recruitment. The purpose of this research was to examine annual and seasonal patterns of infaunal bivalve density and richness in the context of habitat water temperature and salinity. Cores were collected biweekly from Bly Creek in North Inlet estuary between January 2019 and February 2020. Temperatures ranged from 9-30 ºC and salinity ranged from ~17-36 psu. Bivalves were sieved out of the cores, counted, …

Residency, Diel Movement, And Tidal Patterns Of Large Juvenile Bull Sharks (Carcharhinus Leucas) In Winyah Bay, Sc, Jeremy Lee Arnt

Electronic Theses and Dissertations

No abstract provided.

Linking Mosquito Surveillance To Dengue Fever Through Bayesian Mechanistic Modeling, Clinton B. Leach, Jennifer A. Hoeting, Kim M. Pepin, Alvaro E. Eiras, Mevin B. Hooten, Colleen T. Webb

United States Department of Agriculture Wildlife Services: Staff Publications

Our ability to effectively prevent the transmission of the dengue virus through targeted control of its vector, Aedes aegypti, depends critically on our understanding of the link between mosquito abundance and human disease risk. Mosquito and clinical surveillance data are widely collected, but linking them requires a modeling framework that accounts for the complex non-linear mechanisms involved in transmission. Most critical are the bottleneck in transmission imposed by mosquito lifespan relative to the virus’ extrinsic incubation period, and the dynamics of human immunity. We developed a differential equation model of dengue transmission and embedded it in a Bayesian hierarchical …

The Birds Of The Nebraska Sandhills, Paul A. Johnsgard, Josef Kren

Zea E-Books Collection

This book provides basic information on all the species of birds that have been reliably reported from the Nebraska Sandhills region as of 2020. They include 46 permanent residents, 125 summer breeders, 125 migrants, and 102 rare or accidental species, totaling 398 species. Information on status, migration, and habitats is provided for all but the very rare and accidental species. There are also descriptions of 46 refuges, preserves, and other public-access natural areas in the region and seven suggested birding routes. The text contains more than 90,000 words and over 250 literature references along with more than 20 drawings, 9 …

Multidecadal Analysis Of Beach Loss At The Major Offshore Sea Turtle Nesting Islands In The Northern Arabian Gulf, Rommel H. Maneja, Jeffrey D. Miller, Wenzhao Li, Rejoice Thomas, Hesham El-Askary, Sachi Perera, Ace Vincent B. Flandez, Abdullajid U. Basali, Joselito Francis A. Alcaria, Jinoy Gopalan, Surya Prakash Tiwari, Mubarak Al-Jedani, Perdana K. Prihartato, Ronald A. Loughlan, Ali Qasem, Mohamed A. Qurban, Wail Falath, Daniele Struppa

Mathematics, Physics, and Computer Science Faculty Articles and Research

Undocumented historical losses of sea turtle nesting beaches worldwide could overestimate the successes of conservation measures and misrepresent the actual status of the sea turtle population. In addition, the suitability of many sea turtle nesting sites continues to decline even without in-depth scientific studies of the extent of losses and impacts to the population. In this study, multidecadal changes in the outlines and area of Jana and Karan islands, major sea turtle nesting sites in the Arabian Gulf, were compared using available Kodak aerographic images, USGS EROS Declassified satellite imagery, and ESRI satellite images. A decrease of 5.1% and 1.7% …

Coyotes, Rick Tischaefer

Wildlife Damage Management Technical Series

The coyote (Canis latrans; Figure 1) is a medium-sized member of the canid family. Once primarily found in western deserts and grasslands, coyotes have expanded their range across North America and into diverse habitats, including urban areas. This expansion occurred during a time of extensive habitat change and efforts by people to suppress coyote populations to prevent damage. Coyotes can cause a variety of conflicts related to agriculture, natural resources, property, and human health and safety. This document highlights a variety of methods for reducing those conflicts. Coyotes are a highly adaptable species and may become habituated to some management …

Spotted Owls And Forest Fire: Comment, Gavin M. Jones, R. J. Gutiérrez, William M. Block, Peter C. Carlson, Emily J. Comfort, Samuel A. Cushman, Raymond J. Davis, Stephanie A. Eyes, Alan B. Franklin, Joseph L. Ganey, Shaula Hedwall, John J. Keane, Rodd Kelsey, Damon B, Lesmeister, Malcolm P. North, Susan L. Roberts, Jeremy T. Rockweit, Jamie S. Sanderlin, Sarah C. Sawyer, Ben Solvesky, Douglas J. Tempel, Ho Yi Wan, A. Leroy Westerling, Gary C. White, M. Zachariah Peery

United States Department of Agriculture Wildlife Services: Staff Publications

Western North American forest ecosystems are experiencing rapid changes in disturbance regimes because of climate change and land use legacies (Littell et al. 2018). In many of these forests, the accumulation of surface and ladder fuels from a century of fire suppression, coupled with a warming and drying climate, has led to increases in the number of large fires (Westerling 2016) and the proportion of areas burning at higher severity (Safford and Stevens 2017, Singleton et al. 2018). While the annual area burned by fire is still below historical levels (Taylor et al. 2016), some forest types in the west …

Loci Associated With Antibody Response In Feral Swine (Sus Scrofa) Infected With Brucella Suis, Courtney F. Pierce, Vienna R. Brown, Steven C. Olsen, Paola Boggiatto, Kerri Pedersen, Ryan S. Miller, Scott E. Speidel, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Feral swine (Sus scrofa) are a destructive invasive species widespread throughout the United States that disrupt ecosystems, damage crops, and carry pathogens of concern for the health of domestic stock and humans including Brucella suis—the causative organism for swine brucellosis. In domestic swine, brucellosis results in reproductive failure due to abortions and infertility. Contact with infected feral swine poses spillover risks to domestic pigs as well as humans, companion animals, wildlife, and other livestock. Genetic factors influence the outcome of infectious diseases; therefore, genome wide association studies (GWAS) of differential immune responses among feral swine can provide …

A Review Of Avian Influenza A Virus Associations In Synanthropic Birds, Susan A. Shriner, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAV) have received significant attention due to the threat they pose to human, livestock, and wildlife health. In this review, we focus on what is known about IAV dynamics in less common avian species that may play a role in trafficking IAVs to poultry operations. Specifically, we focus on synanthropic bird species. Synanthropic species, otherwise known as peridomestic, are species that are ecologically associated with humans and anthropogenically modified landscapes, such as agricultural and urban areas. Aquatic birds such as waterfowl and shorebirds are the species most commonly associated with avian IAVs, and are generally considered …

Asymmetric Benefits Of A Heterospecific Breeding Association Vary With Habitat, Conspecific Abundance And Breeding Stage, Rose J. Swift, Michael J. Anteau, Erin A. Roche, Mark H. Sherfy, Dustin L. Toy, Megan M. Ring

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Heterospecific breeding associations may benefit individuals by mitigating predation risk but may also create costs if they increase competition for resources or are more easily detectable by predators. Our understanding of the interactions among hetero- and conspecifics is often lacking in mixed species colonies. Here, we test how the presence of hetero- and conspecifics influence nest and chick survival for two listed (under the U.S. Endangered Species Act) migratory species breeding on the Missouri River, USA. We monitored 2507 piping plover Charadrius melodus nests and 3245 chicks as well as 1060 least tern Sternula antillarum nests and 1374 chicks on …

Tools, Techniques And Teamwork: Transferring New Technologies For Wildlife Management, Conservation And Economic Development, John Eisemann, Gail Keirn

United States Department of Agriculture Wildlife Services: Staff Publications

Did you ever wonder who invented radio telemetry? Or breakaway snares? What about the bird repellent methyl anthranilate or the livestock protection collar? These and many other tools used in wildlife damage management resulted from creative thinking by biologists, technicians, researchers and managers working to solve complex wildlife issues. Over the past 90 years, these “aha moments” within the U.S. Department of Agriculture’s Wildlife Services program have ranged from developing novel scare devices, traps and vaccines to exploiting an animal’s visual capabilities to stop unwanted behaviors. Once discovered, these unique ideas may lead to practical, feasible and cost-effective wildlife damage …

Instability Of Glucocorticoid Metabolites In Coyote Scats: Implications For Field Sampling, Erika T. Stevenson, Eric M. Gese, Lorin A. Neuman-Lee, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Studying physiologic stress responses can assist in understanding the welfare of animals. One method of measuring the physiologic stress response is evaluating concentrations of glucocorticoid metabolites in feces. Previously, using an adrenocorticotropic hormone challenge, we found fecal glucocorticoid metabolite levels were a reliable indicator of physiologic stress response in coyotes (Canis latrans). We determine whether glucocorticoid metabolite concentrations remain stable when collecting feces over a 2-week period, a timeframe commonly used in scat surveys for wild canids. We collected feces from 6 captive coyotes maintained at the U.S. Department of Agriculture, Wildlife Services, National Wildlife Research Center, Predator …

Impact Of Anthropic Pressure On The Quality And Diversity Of Groundwater In The Region Of Sighus Oum-El-Bouaghi And El Rahmounia, Algeria., Hadjab Ramzi, Khammar Hichem, Redjaimia Lylia, Merzoug Djemoi, Saheb Menouar

Journal of Bioresource Management

Groundwater of Oum-El-Bouaghi and its surroundings hosts a variety of microflora and fauna. This study investigated the relationship between the effect of human activity and the biodiversity and distribution of aquatic fauna in two semi-arid regions Sighus region (Oum-El-Bouaghi) and El Rahmouni (Constantine) in north-eastern Algeria. Fourteen wells and six springs were studied in two hydrographic basins, that of Constantine and Seybouse Melegue. Significant differences were revealed between the wells and springs in the two watersheds, making it possible to distinguish four groups of wells and two groups of springs. The overall faunal richness of the stations appeared to be …

Vampire Bats: Preparing For Range Expansion Into The U.S., Michael J. Bodenchuk, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

The common vampire bat apparently is expanding its range northwards in Mexico and seems poised to enter the southern United States. Climate models predict suitable habitat in the U.S. in south Texas and parts of southern Arizona. While vampire bats’ northward range expansion is not unexpected, the fact that this species brings a strain of rabies that impacts livestock and people warrants a strategic response. Annual economic damages from bats are estimated between $7M and $9M, largely associated with deaths of livestock from rabies. To prepare for the emerging rabies issue, USDA Wildlife Services programs in Texas and Arizona have …

Intensive Animal Farming Conditions Are A Major Threat To Global Health, Cynthia Schuck-Paim

Animal Sentience

Wiebers & Feigin accurately propose that reducing the risks posed by infectious disease outbreaks and other global health challenges will depend critically on transitioning away from intensive animal farming practices. Creating the right incentive structure for this transition to happen is one of the great challenges in the years to come, but a much-needed step to ensure the health and well-being of current and future generations.

Evaluating The Effect Of The Removal Of Non-Native Trout In Two High Elevation Tributary Streams In The Intermountain West, Clint Brunson

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Native fish species such as Bonneville Cutthroat Trout (BCT) require cold, clear, well-connected streams for spawning and rearing as well as access to complimentary habitats. Increasing river temperatures and lower water flows may have allowed non-native Brown Trout (BNT) to migrate into higher elevation pristine streams. Additionally, anthropogenic actions such as stocking non-native Brown and Brook (BKT) and Rainbow Trout (RBT) for angling opportunities impact BCT. Invasion of these tributaries by non-native species may reduce or eliminate cutthroat trout by predation, competition, displacement, genetic suppression, and exclusion. A seven-fold increase in BNT numbers of 50 to 350 from 2017 to …

Feral Swine, Michael P. Glow, Nathan P. Snow, Kurt C. Vercauteren

Wildlife Damage Management Technical Series

Feral swine (Sus scrofa; Figure 1), also known as feral hogs, feral pigs, wild pigs, wild boar, or other similar derivations, are a non-native species considered to be one of the most destructive invasive terrestrial vertebrates in North America. While feral swine populations remained relatively small and confined in the continental United States following initial introductions by European explorers during the 15th century, substantial range expansion has occurred across every geographical region of the United States (Figure 2). This expansion has primarily been attributed to human-mediated movements, predominately for the purpose of establishing populations for recreational hunting, and facilitated by …

Not The Latest Science: National Recommended Water Quality Criteria For Aquatic Life Under The Clean Water Act, Sam B. Duggan, Christopher J. Kotalik

Minnesota Journal of Law, Science & Technology

No abstract provided.

An Evaluation Of Bird And Bat Mortality At Wind Turbines In The Northeastern United States, Daniel Y. Choi, Thomas W. Wittig, Bryan M. Kluever

United States Department of Agriculture Wildlife Services: Staff Publications

Wind energy offers substantial environmental benefits, but wind facilities can negatively impact wildlife, including birds and bats. Researchers and managers have made major efforts to chronicle bird and bat mortality associated with wind facilities, but few studies have examined the patterns and underlying mechanisms of spatial patterns of fatalities at wind facilities. Understanding the horizontal fall distance between a carcass and the nearest turbine pole is important in designing effective search protocols and estimating total mortality. We explored patterns in taxonomic composition and fall distance of bird and bat carcasses at wind facilities in the Northeastern United States using publicly …

Estimation Of Wildlife Damage From Federal Crop Insurance Data, Sophie Mckee, Stephanie A. Shwiff, Aaron M. Anderson

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Wildlife damage to crops is a persistent and costly problem for many farmers in the USA. Most existing estimates of crop damage have relied on direct assessment methods such as field studies conducted by trained biologists or surveys distributed to farmers. In this paper, we describe a new method of estimating wildlife damage that exploits federal crop insurance data. We focused our study on four crops: corn, soybean, wheat, and cotton, chosen because of their economic importance and their vulnerability to wildlife damage.

RESULTS: We determined crop-raiding hot spots across the USA over the 2015–2019 period and identified the …

Spatial Ecology And Resource Selection Of Bighorn Sheep (Ovis Canadensis) Ewes In A Prairie Badlands Population, Erin Wood

School of Natural Resources: Dissertations, Theses, and Student Research

The basic spatial ecology and habitat relationships of female bighorn sheep in Nebraska are poorly understood. Establishing seasonal patterns of space use and resource selection for this population at the margin of their historical and current range addresses a key knowledge gap and provides important baseline information for ongoing conservation efforts in Nebraska. We deployed GPS radio-collars on 56 adult ewes in western Nebraska to quantify seasonal space use, movements, and resource selection of ewes. To investigate spatial ecology, we quantified movements of ewes and the factors that influence home range size, seasonal use, and spatial stability across seasons. Home …

Consider The Agent In The Arthropod, Nicolas Delon, Peter Cook, Gordon Bauer, Heidi Harley

Animal Sentience

Whether or not arthropods are sentient, they can have moral standing. Appeals to sentience are not necessary and retard progress in human treatment of other species, including invertebrates. Other increasingly well-documented aspects of invertebrate minds are pertinent to their welfare. Even if arthropods are not sentient, they can be agents whose goals—and therefore interests—can be frustrated. This kind of agency is sufficient for moral status and requires that we consider their welfare.

The Lives, Lore, And Literature Of Cranes: A Catechism For Crane Lovers, Paul A. Johnsgard, Thomas D. Mangelsen

Zea E-Books Collection

This book provides basic information on cranes that should be of interest and importance to crane-loving birders (“craniacs”) as well as to ornithologists and wildlife managers. Primary consideration is given to the sandhill and whooping cranes, but all 13 of the Old World cranes are also discussed. Special consideration is given to the relative abundance and conservation status of all of the world’s species, of which nearly half are declining and a few are in real danger of long-term survival. More than 80 refuges and preserves in the United States and Canada, where the best chances of seeing cranes in …

Effects Of Freshwater Crayfish On Influenza A Virus Persistence In Water, J. Jeffrey Root, Jeremy W. Ellis, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Several investigations have recently assessed the ability of some aquatic invertebrates to act as tools for avian influenza A virus (IAV) surveillance as well as their potential role(s) in IAV ecology. Because of this, as well as the high IAV seroprevalence rates noted in select mesocarnivores that commonly inhabit aquatic and semi-aquatic habitats, we evaluated the effects that freshwater crayfish have on IAV in water at three dose levels and monitored for the presence of IAV in crayfish tissues (gill and green gland) and haemolymph at multiple time points. At relatively high, medium 432 and low (approximately 10 , 10 …