Population Biology Commons^™

Bayesian Integrated Species Distribution Models For Hierarchical Resource Selection By A Soaring Bird, Ryo Ogawa, Guiming Wang, L. Wes Burger, Bronson Strickland, J. Brian Davis, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Migratory birds exhibit seasonal geographic range (hereafter, range) dynamics during the annual cycle. Few studies have examined how migratory birds select their habitats for range occupancy at the species level and space use at the individual level simultaneously. We hypothesized that environmental variables directly related to fitness components would affect the range occupancy probabilities of migrants, whereas environment variables related to movements and flights would affect the space use intensities of migrants. We built Bayesian integrated species distribution models (ISDMs) to evaluate the effects of climate conditions, wind conditions, and landcover compositions on the seasonal range dynamics of American white …

Bird Predation On Coho Salmon (Oncorhynchus Kisutch) In Humboldt Bay, Colton J. Dixon

Cal Poly Humboldt theses and projects

Coho Salmon (Oncorhynchus kisutch) populations along the west coast of the United States are declining. In Humboldt County, located in northwestern California, Coho Salmon have been in decline since their federal listing as threatened in 1997, primarily due to habitat loss from logging, agriculture, and urban development. Although these anthropogenic factors caused salmon populations to decline, bird predation may also be hindering population recovery, as evidenced by the recovery of Passive Integrated Transponder (PIT) tags, originally implanted in Coho Salmon, from bird colonies in Humboldt Bay. This study examines predation by Double-crested Cormorants (Phalacrocorax auritus), Caspian …

Migration-Associated Variation In Blood Parasitism, Body Condition, And Stress In Gambel’S White-Crowned Sparrows (Zonotrichia Leucophrys Gambelii), Julianna Deibel

Scripps Senior Theses

Migration is a widespread behavior in animals which both causes and is motivated by fluctuations in nutrient availability. Migration is ecologically important, as it connects areas of differing primary productivities and carries pathogens over distance. The relationship between migration and disease is complex, sensitive to anthropogenic disturbance, and influenced by ecological cycles as well as host, vector and parasite life cycles. Four central migration-infection mechanisms have been proposed: migratory susceptibility, migratory exposure, migratory escape, and migratory culling. These mechanisms may yield increased or decreased infection post-migration, based on migration’s physiological tax and the concentration of pathogens along migratory pathways.

To …

Effects Of Release Techniques On Parent-Reared Whooping Cranes In The Eastern Migratory Population, Hillary L. Thompson, M. Susanna Glass, Marianne M. Wellington, Kim H. Boardman, Glenn H. Olsen

Proceedings of the North American Crane Workshop

Reintroduction of an Eastern Migratory Population (EMP) of whooping cranes (Grus americana) in the United States by release of captive-reared individuals began in 2001. As of 2020, the EMP has approximately 21 breeding pairs and has had limited recruitment of wild-hatched individuals, thus captive-reared juveniles continue to be released into breeding areas in Wisconsin to maintain the population. We investigated the effects of release techniques on survival, behavior, site fidelity, and conspecific associations of 42 captive-parent-reared whooping cranes released during 2013-2019 into the EMP. Individuals were monitored intensively post-release, then as a part of a long-term monitoring program, …

Whooping Crane Stay Length In Relation To Stopover Site Characteristics, Andrew J. Caven, Aaron T. Pearse, David A. Brandt, Mary J. Harner, Greg D. Wright, David M. Baasch, Emma M. Brinley Buckley, Kristine L. Metzger, Matthew R. Rabbe, Anne E. Lacy

Proceedings of the North American Crane Workshop

Whooping crane (Grus americana) migratory stopovers can vary in length from hours to more than a month. Stopover sites provide food resources and safety essential for the completion of migration. Factors such as weather, climate, demographics of migrating groups, and physiological condition of migrants influence migratory movements of cranes (Gruidae) to varying degrees. However, little research has examined the relationship between habitat characteristics and stopover stay length in cranes. Site quality may relate to stay length with longer stays that allow individuals to improve body condition, or with shorter stays because of increased foraging efficiency. We examined this …

Mesopredator Frugivory Has No Effect On Seed Viability And Emergence Under Experimental Conditions, John P. Draper, Trisha B. Atwood, Noelle G. Beckman, Karin M. Kettenring, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Members of the order Carnivora are a unique and important seed disperser who consume and deposit undamaged seeds while providing regular long-distance seed dispersal opportunities. Some members of Carnivora, such as coyotes (Canis latrans), are undergoing range expansions which may help the plant species they consume colonize new locations or replace dispersal services provided by recently extirpated species. In this study, we evaluated aspects of the seed dispersal effectiveness of coyotes and gut passage time to determine the potential dispersal distances for three commonly consumed and commonly occurring plant species (Amelanchier alnifolia, Celtis ehrenbergiana, and Juniperus osteosperma). We also investigated …

Intensive Hunting Pressure Changes Local Distribution Of Wild Boar, Jakub Drimaj, Jiří Kamler, Radim Plhal, Přemysl Janata, Zdeněk Adamec, Miloslav Homolka

Human–Wildlife Interactions

Wild boar (Sus scrofa) is now an important species of wild ungulates in Central Europe. Next to conflicts of wild boar with agriculture, the main threat of wild boar presence lies in the expansion of African swine fever across Europe. The regulation of the wild boar population is complicated by the high reproduction rate and intelligent behavior of the species, which limits hunting effectiveness. We analyzed the spatial behavior of wild boar in an environment with a lack of natural food resources. The study area consisted of a forest complex (1,283 ha) with 2 areas. In the “risk” …

Documentation Of Atlantic Tarpon (Megalops Atlanticus) Space Use And Move Persistence In The Northern Gulf Of Mexico Facilitated By Angler Advocates, J. Marcus Drymon, Matthew B. Jargowsky, Michael A. Dance, Mitchell Lovell, Crystal L. Hightower, Amanda E. Jefferson, Andrea M. Kroetz, Sean P. Powers

University Faculty and Staff Publications

Atlantic tarpon (Megalops atlanticus, hereafter tarpon) are facing a multitude of stressors and are considered Vulnerable by the IUCN; however, significant gaps remain in our understanding of tarpon space use and movement. From 2018 to 2019, citizen scientists facilitated tagging of 23 tarpon with SPOT tags to examine space use and movement across the northern Gulf of Mexico. Movement-based kernel densities were used to estimate simplified biased random bridge-based utilization distributions and a joint move persistence model was used to estimate a behavioral index for each fish. Tarpon showed consistent east–west movement from the Alabama/Florida border to Louisiana, and utilization …

Evidence For Continental-Scale Dispersal Of Antimicrobial Resistant Bacteria By Landfill-Foraging Gulls, Christina A. Ahlstrom, Mariëlle L. Van Toor, Hanna Woksepp, Jeffrey C. Chandler, John A. Reed, Andrew B. Reeves, Jonas Waldenström, Alan B. Franklin, David C. Douglas, Jonas Bonnedahl, Andrew M. Ramey

United States Department of Agriculture Wildlife Services: Staff Publications

Anthropogenic inputs into the environment may serve as sources of antimicrobial resistant bacteria and alter the ecology and population dynamics of synanthropic wild animals by providing supplemental forage. In this study, we used a combination of phenotypic and genomic approaches to characterize antimicrobial resistant indicator bacteria, animal telemetry to describe host movement patterns, and a novel modeling approach to combine information fromthese diverse data streams to investigate the acquisition and long-distance dispersal of antimicrobial resistant bacteria by landfill-foraging gulls. Our results provide evidence that gulls acquire antimicrobial resistant bacteria from anthropogenic sources, which they may subsequently disperse across and between …

Migratory Flyways May Affect Population Structure In Double‐Crested Cormorants, Steven J.A. Kimble, Brian S. Dorr, Katie C. Hanson-Dorr, Olin E. Rhodes Jr., Travis L. Devault

United States Department of Agriculture Wildlife Services: Staff Publications

Double‐crested cormorants (Phalacrocorax auritus) recovered from a demographic bottleneck so well that they are now considered a nuisance species at breeding and wintering grounds across the United States and Canada. Management of this species could be improved by refining genetic population boundaries and assigning individuals to their natal population. Further, recent radio‐telemetry data suggest the existence of Interior and Atlantic migratory flyways, which could reduce gene flow and result in substantial genetic isolation. In this study, we used 1,784 individuals collected across the eastern United States, a large panel of microsatellite markers developed for this species, and individuals banded as …

Comparing Fence Modeling And Mapping Approaches To Support Wildlife Management And Research In Southwest Montana, Simon Albert Buzzard

Graduate Student Theses, Dissertations, & Professional Papers

Fences pose significant challenges to wildlife movement, but their effects are difficult to quantify because fence location and fence type data are lacking on a global scale. We developed a fence location and density model in southwest Montana, USA to provide data to researchers and managers, and test whether previous models could be applied to a new region and retain suitable levels of statistical accuracy. Our model used local expert opinion to inform how road, land cover, and ownership spatial layers interacted to predict fence locations. We validated the model against fence data collected on random 3.2 km road transects …

Patterns Of Genetic Structure In The American Kestrel (Falco Sparverius): Influence Of Distance And Migration And Implications For Monitoring And Management, Michaela Brinkmeyer

Boise State University Theses and Dissertations

Genetic structure is useful for inferring patterns of selection, gene flow and connectivity, and can define management units that aid in interpretation of spatially-specific trends and species management. American kestrels (Falco sparverius) are a widespread, generalist species with fully migratory, partial migrant, and resident populations. In many parts of their range, kestrels show evidence of declining population trends; however, it has been difficult to identify threats to kestrels because of differences in regional trends. We used a genome-wide sequencing approach to investigate the genetic structure of American kestrels, test hypotheses about the processes that influence genetic structuring of …

Winter And Migratory Habitat Use Of Six Eastern Greater Sandhill Cranes, Hillary L. Thompson, Anne E. Lacy

Proceedings of the North American Crane Workshop

To better understand non-breeding ecology of sandhill cranes (Grus canadensis tabida), we harnessed 6 satellite GPS transmitters to adult cranes from 1 central Wisconsin breeding area. Using location data from these transmitters, we investigated non-breeding movements, including the routes and timing of migration. By combining satellite GPS data with a national land cover dataset, we also described habitat use on stopovers and wintering areas. Sandhill cranes tended to use larger home ranges on long stopovers (>3 days) than on short stopovers (3 days or less). The durations of northward migrations were longer and had more stopovers than …

A Review Of Fall Sandhill Crane Migration Through Indiana, Allisyn-Marie T. Y. Gillet

Proceedings of the North American Crane Workshop

The Indiana Division of Fish and Wildlife conducts surveys from October to December to collect long-term data on greater sandhill cranes (Grus canadensis tabida). Results from these censuses contribute to a fall index of the Eastern Population, which informs wildlife management decisions and research priorities. Recent findings from the annual U. S. Fish and Wildlife Service Fall Sandhill Crane Migration Survey demonstrate a decline in the number of cranes observed at fall staging areas throughout Indiana since 1979. However, nationwide data exhibit a trend of population increase. I provide evidence to show that the apparent decline in the …

Effect Of Recent Historical Events On Migration And Isonymic Stratification Among The Rama Amerindians From Nicaragua, Norberto F. Baldi

Human Biology Open Access Pre-Prints

The Rama Amerindians from southern Nicaragua are one of few indigenous populations inhabiting the east coast and lowlands of southern Central America. Early 18th century ethnohistorical accounts depicted the Rama as a mobile hunter-gatherer and horticulturalists group dispersed in household units along southern Nicaraguan rivers. However, during the 19th and 20th centuries, Rama settlement patterns changed to aggregated communities due to increased competition for local resources resulting from non-indigenous immigration. This study’s objective was to discern the degree of relatedness between and within subdivisions of seven of these communities based on patterns of surname variation and genealogical data. We applied …

Terrestrial Habitat Requirements Of Nesting Freshwater Turtles, D. A. Steen, J. P. Gibbs, K. A. Buhlman, J. L. Carr, B. W. Compton, J. D. Congdon, J. S. Doody, J. C. Godwin, Kerry L. Holcomb, D. R. Jackson, F. J. Janzen, G. Johnson, M. T. Jones, J. T. Lamer, T. A. Langen, M. V. Plummer, J. W. Rowe, R. A. Saumure, J. K. Tucker, D. S. Wilson

All Faculty Scholarship for the College of the Sciences

Because particular life history traits affect species vulnerability to development pressures, cross-species summaries of life history traits are useful for generating management guidelines. Conservation of aquatic turtles, many members of which are regionally or globally imperiled, requires knowing the extent of upland habitat used for nesting. Therefore, we compiled distances that nests and gravid females had been observed from wetlands. Based on records of > 8000 nests and gravid female records compiled for 31 species in the United States and Canada, the distances that encompass 95% of nests vary dramatically among genera and populations, from just 8 m for Malaclemys to …

Patterns Of Transience, Sex Bias, And Body Mass In Open-Habitat Rodent Populations, Stephen Edward Rice

Biological Sciences Theses & Dissertations

Rodents are assumed to live their lives in circumscribed (natal) areas with males being more prone to disperse than females and juveniles more prone to disperse than adults. To test these assumptions we examined the initial captures of geographic populations of hispid cotton rat, meadow vole, prairie vole, and marsh rice rat obtained through capture-mark-recapture methods. Capture records were obtained from Kansas and Illinois from long-term studies, and through live-trapping in Chesapeake, Virginia. I evaluated proportions of residents and transients, adults and juveniles, and males and females for significant differences among seasons, years, and geographic locations. The overall body masses …

Conserving Migratory Land Birds In The New World: Do We Know Enough?, John Faaborg, Richard T. Holmes, Angela D. Anders, Keith L. Bildstein

Dartmouth Scholarship

Migratory bird needs must be met during four phases of the year: breeding season, fall migration, wintering, and spring migration; thus, management may be needed during all four phases. The bulk of research and management has focused on the breeding season, although several issues remain unsettled, including the spatial extent of habitat influences on fitness and the importance of habitat on the breeding grounds used after breeding. Although detailed investigations have shed light on the ecology and population dynamics of a few avian species, knowledge is sketchy for most species. Replication of comprehensive studies is needed for multiple species across …

The Role Of Retrieval And Translocation In A Reintroduced Population Of Migratory Whooping Cranes, Sara E. Zimorski, Richard P. Urbanek

Proceedings of the North American Crane Workshop

Beginning in 2001, a reintroduction project was initiated using captive-reared whooping cranes (Grus americana) to establish a migratory flock in eastern North America. From May 2003 to August 2008, 23 of these birds were retrieved and translocated in 15 separate events. These individuals consisted of 14 cranes that had been led to Florida by ultralight aircraft on their first autumn migration (UL) and 9 cranes that had been directly released in autumn in Wisconsin (DAR). Of 104 (86 UL and 18 DAR) reintroduced individuals that eventually departed from their release location, 22% were later retrieved 1-3 times. Lake …

The Direct Autumn Release Of Whooping Cranes Into The Eastern Migratory Population: A Summary Of The First Three Years, Marianne M. Wellington, Richard P. Urbanek

Proceedings of the North American Crane Workshop

This paper describes methods used in an experimental direct autumn release of captive produced whooping cranes (Grus americana) into a reintroduced migratory population in eastern North America. Eighteen chicks (4 in 2005, 4 in 2006, and 10 in 2007) were eventually released in the vicinity of adult whooping cranes or wild sandhill cranes (G. canadensis). Chicks were reared by costumed aviculturists using strict isolation-rearing techniques at the International Crane Foundation (ICF) and then transferred to Necedah National Wildlife Refuge in central Wisconsin. Initially, 23 chicks were transferred from ICF to Necedah at ages of 17-46 days. …

Sandhill Crane Migration Chronology And Behavior In Northwestern Texas, Carroll D. Littlefield

Proceedings of the North American Crane Workshop

Migrant lesser sandhill cranes (Grus canadensis canadensis) were monitored during 1990-2000 in northwestern Texas as flocks were arriving in autumn and departing in spring; cranes were counted as they passed over an observation point 23 km north of Sudan, Lamb County, Texas. Mean flock size was 34.5 (SD ± 32.6) in autumn and 58.2 (SD ± 45.0) in spring. Most autumn migrants (69.6%) passed in the afternoon, whereas in spring 94% migrated in the morning (1000-1200 hr). Peak period of autumn passage was in October (65%), and in spring all observations were in February-March with the peak usually …

Population Status And Geographic Distribution Of Greater Sandhill Cranes In The Mid-Continent Population, Gary L. Krapu, David A. Brandt

Proceedings of the North American Crane Workshop

Number and geographic distribution of greater sandhill cranes (Grus canadensis tabida) in the mid-continent population (MCP) of sandhill cranes were evaluated. G. c. tabida comprised 7 of 133 (5.3%) individuals of 3 subspecies which projects to 31,579 ± 11,661 (SE) individuals in an estimated spring MCP of 600,000 cranes. From a platform transmitting terminal (PTT)-marked sample representative of the geographic distribution of G. c. tabida, 10 of 13 (77%) settled during the breeding season in east-central Canada/Minnesota, including 4 in northwestern Minnesota, 4 in Manitoba (2 at sites near the Minnesota border), and 2 in Ontario. Three …

Whooping Crane Migrational Habitat Use Of The Platte River, Nebraska, 2001–2006, Shay Howlin, Clayton Derby, Dale Strickland

Proceedings of the North American Crane Workshop

The Platte River Endangered Species Partnership monitored whooping crane (Grus americana) habitat use along the Platte River between Chapman and Lexington, Nebraska during 11 migration seasons from 2001 to 2006. Daily aerial surveys took place in the morning from 21 March to 29 April in the spring and from 9 October to 10 November in the fall. Decoy detection trials were conducted during each of the 11 survey seasons to calculate actual sample inclusion probabilities for crane groups detected during monitoring flights. The detectability model found significant differences in detectability among strata (upland or channel), contractor, and altitude …

Development Of The Whooping Crane Tracking Project Geographic Information System, Martha Tacha, Andy Bishop, Justin Brei

Proceedings of the North American Crane Workshop

The highest losses in the Aransas-Wood Buffalo whooping crane population occur during migration. Conservation and recovery of the endangered whooping crane requires understanding of migration patterns to identify important stopover areas and potential sources of mortality or disturbance. We converted the Cooperative Whooping Crane Tracking Project database, containing more than 3 decades of data on whooping crane sightings, to a geographic information system (GIS) to allow coarse scale spatial analyses of whooping crane migration patterns in the United States portion of the Central Flyway. At this writing, the geodatabase contains point data for 1,981 confirmed whooping crane sightings through the …

Temporal Shifts In Demography And Life History Of An Anadromous Alewife Population In Connecticut, Justin P. Davis, Eric T. Schultz

EEB Articles

Populations of anadromous alewives (Alosa pseudoharengus) are declining throughout much of their range, particularly in southern New England where fishery moratoriums have recently been instituted in three states. The alewife run at Bride Brook, a coastal stream in East Lyme, Connecticut, was studied from 2003-06 to assess shifts in demography and life history. Annual censuses of abundance, along with sampling for size, age, and spawning history structure were conducted. These data were compared to similar data in 1966-67 at this site. Recent alewife runs at Bride Brook featured lower abundance and younger, smaller fish that were less likely to be …

Spring Migratory Habits And Breeding Distribution Of Lesser Sandhill Cranes That Winter In West-Central New Mexico And Arizona, Gary L. Krapu, David A. Brandt

Proceedings of the North American Crane Workshop

Little information exists on the spring migratory habits and breeding distribution of lesser sandhill cranes (Grus canadensis canadensis) that winter in west-central New Mexico and southeastern Arizona. To address this question, we captured and attached a total of 6 Platform Transmitting Terminals (PTT) to adult lesser sandhill cranes at 2 sites each in west-central New Mexico and southeastern Arizona during December 2001 and monitored the birds’ movements to arrival on their arctic breeding grounds. After departing from their wintering grounds, 2 of the cranes stopped at Monte Vista NWR in south-central Colorado where they stayed for 17 and …

A Landscape Perspective Of Whooping Crane Migration Through Nebraska: Conservation And Management Implications, Felipe Chavez-Ramirez, Chris Helzer, Paul Tebbel

Proceedings of the North American Crane Workshop

Past and current discussions of conservation of whooping crane (Grus americana) stopover habitat in Nebraska have long been focused on the Platte River. We evaluated the distribution of whooping crane stopover sites in Nebraska in a broader context to (a) determine the distribution of whooping crane stopover sites on the Platte River relative to other landscapes and (b) use whooping migratory behavior data to systematically define and explain patterns of stopover clusters. The distribution of stopover clusters suggests rainwater basin wetlands and the Platte River may be used interchangeably by migrating whooping cranes. The Rainwater Basin and Platte River appear …

Behavior Comparisons For Whooping Cranes Raised By Costumed Caregivers And Trained For An Ultralight-Led Migration, Glenn H. Olsen, John B. French

Proceedings of the North American Crane Workshop

The successful reintroduction program being run by the Whooping Crane Eastern Partnership using whooping cranes (Grus americana) trained to fly behind ultralight aircraft depends on a supply of these trained crane colts each year. The crane colts are hatched from eggs contributed by the various partners and trained to follow costume clad humans and ultralight aircraft at USGS Patuxent Wildlife Research Center, Laurel, Maryland, USA. After several seasons of raising small numbers of crane colts (7-14), we wanted to increase the number of birds being trained, but were restrained by limits in our facilities. By altering the established …

Anadromous Rainbow Smelt And Tomcod In Connecticut: Assessment Of Populations, Conservation Status, And Need For Restoration Plan, Heather A. Fried, Eric T. Schultz

EEB Articles

(beginning of rainbow smelt executive summary)

Evidence indicates that anadromous rainbow smelt (Osmerus mordax) populations in Connecticut and elsewhere in the northeast United States have severely declined. Several sampling programs have documented declines in Connecticut’s smelt populations over the last three decades (Marcy 1976a, Marcy 1976b, Millstone Environmental Laboratory 2005). Similar declines have also been documented in the Hudson River (ASA Analysis & Communication 2005) and in Massachusetts (personal communication, Brad Chase, MA Division of Marine Fisheries 2004). Recreational and commercial fisheries in the region for this species have virtually ceased (Blake and Smith 1984). The Connecticut Fish Advisory Committee …

Assessment Of Anadromous Alewife And Blueback Herring Populations In Connecticut Coastal Streams And Connecticut River Tributaries, Justin P. Davis, Eric T. Schultz

EEB Articles

Alewife (Alosa pseudoharengus) and blueback herring (A. aestivalis) occur in anadromous populations that have a largely overlapping distribution from Florida to Newfoundland (Loesch 1987). Anadromous populations of these species are commonly collectively referred to as “river herring”. Adults inhabit coastal shelf waters until sexual maturity is reached at age 3-5 (Neves 1981). Sexually mature individuals make spawning migrations, commonly referred to as “runs”, into freshwater systems during spring months (Loesch 1987). Spawners can survive and return to spawn in subsequent years (Mullen et al. 1986). Juveniles reside in freshwater for 3-7 months, at which time they undertake a gradual migration …