Population Biology Commons^™

Freshwater Macroinvertebrate Communities In Baldwin County, Georgia, Heath Michael Ghioto, Michelle K. Murdock, Nadya S. Gutierrez, Kristine N. White Ph.D.

Georgia Journal of Science

Freshwater ecosystems are critical habitats for maintaining biodiversity, often providing refuge for organisms especially in urban settings. Baldwin County, GA is home to many freshwater lakes that are part of the Oconee River watershed. Despite ongoing water quality monitoring, aquatic macroinvertebrates are under studied in the area. Aquatic macroinvertebrate diversity of one forested and one residential lake in Milledgeville, GA was documented for the first time. Despite low sample size, community composition was significantly different between lakes, with 27 families in Lake Laurel (forested), 44 families in Lake Oliver Hardy (residential), and only 19 families collected from both lakes. Seasonal …

The Effects Of Landscape And Yard Features On Mammal Diversity In Residential Yards Within Northwest Arkansas, Usa, Emily P. Johansson, Brett A. Degregorio

Biological Sciences Faculty Publications and Presentations

The human footprint is rapidly expanding, and wildlife habitat is continuously being converted to human residential properties. Surviving wildlife that reside in developing areas are displaced to nearby undeveloped areas. However, some animals can co-exist with humans and acquire the necessary resources (food, water, shelter) within the human environment. This ability to coexist may be particularly true when development is low intensity, as in residential suburban yards. Yards are individually managed “greenspaces” that can provide a range of food (e.g., bird feeders, compost, gardens), water (bird baths and garden ponds), and shelter (e.g., brush-piles, outbuildings) resources and are surrounded by …

South Coast Offshore Crustacean Resource Of Western Australia Harvest Strategy, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

Harvest strategies for aquatic resources in Western Australia (WA) that are managed by the Department of Primary Industries and Regional Development (DPIRD, the Department) are formal documents that ensures decision-making processes are consistent with the principles of Ecologically Sustainable Development (ESD; Fletcher 2002) and Ecosystem Based Fisheries Management (EBFM; Fletcher et al. 2012). The objectives of ESD are reflected in the objects of the Fish Resources Management Act 1994 (FRMA) and the Aquatic Resources Management Act 2016 (ARMA), which is anticipated replace the FRMA once enacted. At this point, the Fish Resources Management Regulations 1995 (FRMR) is also anticipated to …

Go Big Or Go Home: Divergence In Morphology And Behavior Between Island And Islet Populations Of The San Cristóbal Lava Lizard (Microlophus Bivittatus), Emilio J. Mancero

Masters Theses

Rapid divergence in body size is a well-documented phenomenon among island species, associated with macroevolutionary processes of diversification and adaptive radiation. The effect of insularity in determining larger body size as an optimal phenotype is primarily attributed to lower predation and greater intraspecific competition on islands. Our study examined interpopulation variation in morphology, social behavior and predator avoidance in Galápagos lava lizards endemic to San Cristóbal island (Microlophus bivittatus), and the nearby islet Isla Lobos. Islet populations have fewer competitors than those on the island, where native and introduced predators are abundant. We simulated interactions with predators and …

Resolving The Paradox Of Polyploidy: Underexplored Facets Of Polyploid Plants, Benjamin P. Gerstner

Biology ETDs

Polyploidy, or whole genome duplication, is a common phenomenon in plants, but the establishment and persistence of mixed-ploidy populations remains a paradox. This dissertation explores factors that contribute to the persistence and establishment of mixed-ploidy populations in nature. The first chapter investigates the role of unreduced gametes in neopolyploid establishment and finds that variability in their formation rate can have a significant impact on polyploid establishment and persistence. The second chapter searches for evidence of soil microbes exhibiting ploidy-specificity, a pre-condition for microbe-mediated niche differentiation, a possible stabilizing mechanism contributing to ploidy coexistence. Finally, the third chapter tests for microbe-mediated …

Western Pearlshell (Margaritifera Falcata) Extirpation In The Smith River, Montana, With A Possible Link To Warming Water Temperatures, David M. Stagliano

Western North American Naturalist

Western pearlshell (Margaritifera falcata) populations are in decline across the species’ range in western North America. In 2008, Montana categorized the western pearlshell as an imperiled species of concern (S2) based on reduced detections at historically occupied sites and few viable populations. Between 2004 and 2014, we surveyed 24 Smith River reaches (61 total sites in the watershed) for the presence of western pearlshell populations. Despite historical and anecdotal descriptions of abundant western pearlshell in the Smith River, intensive structured surveys between 2004 and 2007 documented only 4 sections with low-density, nonviable western pearlshell populations (<10 individuals, large size classes [average total length = 70 mm], with no signs of recruitment). In 2014, we revisited these occupied sites to repeat surveys (expending significantly more search time) and observed no live individuals. This was surprising given that, although those populations would certainly die out without recruitment, older individuals can oftentimes persist for decades. Therefore, we consider the western pearlshell mussel extirpated from the Smith River watershed. We reviewed long-term USGS gage discharge and temperature data near the western pearlshell populations to evaluate the potential causal factors for, and timing of, the extirpation. From 3 July to 3 August 2007, water temperatures were at or above the thermal stress levels of the western pearlshell (>25 °C, …

An Ecological Survey Of East Texas Salamanders Across The Camp Tyler Outdoor Field School In Smith County, Texas, Justin C. Hunt

Biology Theses

Amphibians are a unique class of organisms with a very long and storied evolutionary history of survival. Many modern amphibian clades occupy several vital ecological roles within their native freshwater environments. One of these roles, typically includes functioning as an ecological indicator species, whereby the presence of stable and diverse populations of many amphibian species, including salamanders, within a freshwater ecosystem have long been considered ecological indicators of good habitat quality and stable ecosystem health. Similarly, salamanders also function as important members of their local food webs and act as valuable mediators of complex trophic hierarchies to facilitate nutrient cycling …

Testing The Urban Dulling Hypothesis In An Iridescent Passerine Bird, Joanna Gresham

Master of Science in Integrative Biology Theses

Urbanization has brought grave consequences that lead to declines in many species; however, some species thrive in urban ecosystems. This allows us the opportunity to study evolution in real time, as species adapt and change in a new setting. Novel urban ecosystems have led to phenotypic divergence between urban and rural populations. There is a rich body of literature on how songbirds are affected by urbanization, however divergent signaling behaviors are less well understood. Urban color homogenization is well-documented in carotenoid-colored species. However, iridescent plumage is understudied in general, and little is understood about how environmental changes shape iridescent plumage. …

Development Of A 16s Reference Library For Edna Metabarcoding The Freshwater Fishes Of Western Ecuador., Hannah M. Willis, Olivia G. Schweikart, Windsor E. Aguirre

DePaul Discoveries

This project examines the use of the 16S locus to amplify neotropical freshwater fishes native to Western Ecuador in a newly created 16S reference library for DNA barcoding and eDNA metabarcoding applications. Among the orders Characiformes, Siluriformes, Cichliformes, Gobiiformes, Cryprinodontiformes, Gymnotiformes, and Perciformes, a compendium of 105 specimens were sequenced, with 43 representing new 16S sequences previously unavailable on Genbank.

Relative Genetic Homogeneity Within A Phenotypically Diverse Group; A Case Of The Lake Tana Labeobarbus (Cyprinidae) Species Flock, Ethiopia, Kebede Beshera

Faculty Publications

The Lake Tana Labeobarbus species flock represents one of the world’s most famous examples of lacustrine species radiations. Previous studies of this group have resulted in the description of at least 15 species based on their differences in functional morphology and definition of two clades (lacustrine and riverine spawning clades) based on life history traits. A total of 166 fish representing 14 Labeobarbus species were genotyped using 10 lineage-specific hexaploid microsatellite loci. Six of these loci were developed for this study based on DNA sequence contigs derived from a microsatellite-enriched genomic library of Labeobarbus intermedius from Lake Tana; the remaining …

A Baseline Assessment Of Migratory And Resident Bird Use Of A Prairie Restoration Site In Eastern Washington, Madilyn J. Odiorne, Brynn A. Richey, Ruby L. Hammond

2023 Symposium

Prairies, and other types of grassland ecosystems, have suffered some of the most profound losses worldwide, due to anthropogenic factors such as fossil fuel extraction, agriculture, and climate change. Likewise, organisms inhabiting grassland ecosystems have become extirpated across much of their historical range, not the least of which has been a 50% decline in grassland birds since the 1960s. In response to losses of intact prairie in eastern Washington, a 120-ac site has been established on the EWU campus to regenerate native prairie and monitor changes in the ecosystem as native plants recolonize and replace non-natives. Because birds are an …

Community And Population Dynamics Of Diatoms In Recovering Agricultural Stream And Ubiquitous Taxon In Low-Impact Sites Across Southeastern United States, Sydney Brown

Biology Theses

Streams play vital roles to surrounding communities and provide essential ecosystem services. The protection of streams is important, legally protected under the Clean Water Act (CWA) and can be monitored through the continuous analyses of biological data, like algal or other aquatic communities. Diatoms are a group of algae characterized by rigid glass cell walls and ubiquitous distribution. They are typically identified using the morphological species concept and an ever-varying range of sizes may pose challenges in the identification process. However, when identified and applied correctly, diatoms are robust bioindicators. This research identifies and analyzes low-impact sites across the Southeastern …

Past And Present Patterns Of Neutral And Adaptive Genetic Diversity In Wild Mandrills (Mandrillus Sphinx), Anna Weber

LSU New Orleans Theses and Dissertations

Although primates have fascinated researchers and the public alike for generations, one species that has remained enigmatic is the mandrill (Mandrillus sphinx), a large Cercopithecine monkey endemic to Central Africa. Mandrills are currently in decline due to bushmeat hunting, urbanization, and habitat loss. Neutral and adaptive genetic diversity are important tools for understanding evolutionary history and future viability, since diversity influences a species’ ability to adapt to a changing environment. However, thus far, minimal genetic information has been available for wild mandrills. Because of the dense vegetation in their tropical forest habitat, studying wild mandrills has proven to …

Forest Recruitment Dynamics Within The Southern Boreal-Temperate Ecotone, Kiley M. Chernicky

2023 Midwest Ecology & Evolution Conference

Understanding how global climate change will alter future forest composition is especially challenging in forest communities where tree species have long co-occurred, but their competitive balance may be altered due to changes in climate. Of particular concern with increasing global temperatures are boreal forest communities that lie on the southern boreal-temperate forest ecotone, where the boreal forest is particularly vulnerable. The aim of my research is to investigate shifts in recruitment dynamics due to climate change near the southern range limit of two historically co-occurring boreal forest conifer species, white spruce (Picea glauca) and balsam fir (Abies …

Polyploidy’S Impact On Plant-Herbivore Dynamics: Evidence From Experiments With Water-Lily Aphids And Greater Duckweed, Hannah R. Assour

2023 Midwest Ecology & Evolution Conference

Polyploidy, or whole-genome duplication, is a widespread mutational process in plants with a myriad of phenotypic and genotypic consequences. In addition to consequences incurred by the plant, polyploidy can potentially cascade to alter species interactions. Yet, knowledge of whether ploidy-induced variation has effects on plant-herbivore dynamics is scarce. Here, we test whether aphid herbivores exhibit preference for a diploid or polyploid host cytotype and whether ploidy impacts plant resistance and tolerance to aphids, measured as aphid and plant performance respectively. To answer these questions, we evaluated aphid choice and compared the effects of the water-lily aphid (Rhopalosiphum nymphaeae) …

Sheep Ingestive Behavior And Tannin Selection In Pampa Grassland And Feedlot, Marina Terra Braga

Green Canyon Environmental Research Area, Logan Utah

The Pampa grassland biome has high plant biodiversity, some with significant secondary compound concentrations such as tannins. Tannin inclusion in ruminant diets may improve meat quality and productivity. However, voluntary intake of this phenolic compound can be a challenge. This dissertation includes three studies within this context. The first study documented whether sheep consume tannin-rich Desmodium incanum (DI), the most common Pampa herbaceous legume species. The second study evaluated how forage tannin and protein concentration influenced sheep feedlot feed selection and the diet affects performance parameters. The third study evaluated sheep feeding behavior in a Pampa native pasture, and how …

An Automatic System To Evaluate Bait Station Visitation By Brown Treesnakes And Mongooses, Robert T. Sugihara, William C. Pitt, Are R. Berentsen, Francis L. Benevides Jr.

Human–Wildlife Interactions

Understanding the temporal, spatial, and behavioral patterns of the free-ranging target species in response to candidate baits and baiting strategies is important to ensure control success. This information can also assist in the development and deployment of feeding stations and can exclude non-target species while constituting effective bait delivery and control strategies for certain invasive animals, especially at environmentally sensitive sites. We used passive integrated transponder (PIT) tags in conjunction with very-high frequency radio-telemetry to remotely record bait station visitations and evaluate bait attractiveness in separate field research studies of brown treesnakes (Boiga irregularis) on Andersen Air Force …

What Kills The Virtually Immortal Palms Of The Florida Scrub?, Warren G. Abrahamson Ii

Faculty Journal Articles

Premise: Life span varies greatly across plants, with some species being capable of extreme longevity. Yet even long‐lived individuals are susceptible to climatic events, fire, and other challenges. We examined rare mortality events and their causes in two long‐lived palmettos over four decades. Methods: We monitored the survival of the clonal Serenoa repens and non‐clonal, Florida‐endemic Sabal etonia from 1981 to 2022 in four habitats along an elevational gradient within the globally imperiled Florida scrub ecosystem. We considered several challenges to palmetto survival, including extreme fires, shading due to lack of fire, droughts, periods of high precipitation, and possible pathogens. …

Differences In Drifting Invertebrate Communities Across Arctic Ecozones And The Influence On Potential Growth Of Grayling (Thymallus Arcticus), Charles Chanyi

Theses and Dissertations (Comprehensive)

Invertebrate drift is a key process that potentially affects multiple levels of food web organization within stream environments. However, our understanding of the mechanistic drivers of drift in high latitude streams and subsequent bottom-up control that drift may have on fish predators in these environments remains understudied. This project aimed to gain the baseline knowledge of how drift functions across two major high latitude ecozones, the boreal forest and tundra, and how those possible differences in drifting community characteristics may impact drift-feeding Arctic grayling (Thymallus arcticus). These objectives were accomplished by characterizing stream environments across both ecozones, sampling …

Preliminary Analysis Of The Effects Of Non-Target Supplemental Feeding On Camera Trap Captures Of Small Mammals In Central Georgia, Raena Mccown, Travis Cunningham, Alfred J. Mead

Georgia Journal of Science

Supplemental bird feeding is a widespread hobby throughout western culture. Although it brings joy to many people, bird feeding has been shown to have potentially negative effects on local bird populations and small mammalian species. To study the differences in local occurrence of native small mammalian species around bird feeders and in more distant settings, six camera traps were placed in a rural residential area in Putnam County, Georgia. Three cameras were placed facing bird feeders and three placed a minimum of 60 m away from the feeders. Species presence was recorded three days a week from 12:00 am Monday …

Environmental Influences On The Growth Of Inland Cisco Populations In Three Minnesota Sentinel Lakes, Edward Carlson

Biology Graduate Theses

Cisco Coregonus artedi are a pelagic cold-water fish that are widely distributed throughout many inland lakes across the northern Midwest and play an important role as forage for large piscivores. Inland Cisco populations have been observed to vary in their overall size and recruitment potential based on the system in which they are found. Cisco are sensitive to oxythermal stress and with climate change, land use, and invasive species effects becoming more prevalent in Minnesota, aspects of lake ecosystems are changing, ultimately making Cisco more susceptible to these stressors. To investigate how different factors were affecting the population dynamics of …

Potential Fitness Trade-Offs Of Elevated Esterase Activity Associated With Insecticide Resistance In The Mosquito Culex Quinquefasciatus, Timothy Schulte

Electronic Theses, Projects, and Dissertations

One of the current major issues in the control of vector-borne disease is resistance to insecticides. Resistance to one or more insecticides has appeared in over 580 different arthropod species. Widespread resistance has led to the field of Insecticide Resistance Management (IRM). The goal of IRM is to develop insecticide-use strategies that prevent or slow down the evolution of resistance. Computer models have shown that more effective IRM strategies rely on the assumption that resistance carries a fitness cost in the absence of insecticide use.

In the mosquito Culex quinquefasciatus resistance to certain organophosphate insecticides is caused by an increased …

Chromosome Number Evolution, Phylogeography, And The Effects Of Climate Change On Species Distributions In Polyploid Plant Systems, Courtney H. Babin

LSU New Orleans Theses and Dissertations

Polyploidy, a term used to describe organisms with cells having more than two paired sets of chromosomes, is a significant driver of diversification among land plants. Over a century of research has advanced our understanding of polyploidization in some taxa, but polyploid organisms remain understudied. In this dissertation, I investigate chromosome number evolution, phylogeographic structure, genetic differentiation, and the effects of climate change on ploidy level distribution using polyploid plant systems. In the first chapter, I inferred a molecular phylogeny of Allium, an economically important genus that includes cultivated crops and ornamentals, to investigate evolutionary transitions in chromosome number …

Population Genetics Of Cownose Rays, Rhinoptera Spp. In The Western Atlantic, Helen Weber

Master's Theses

Using molecular tools (e.g., the NADH subunit II mitochondrial gene), this study was the first to document the Brazilian cownose ray, Rhinoptera brasiliensis, within the northwestern Atlantic (NWA), and was the first study to examine population structure in R. brasiliensis within the NWA or northern Gulf of Mexico (GMX), revealing novel insights into the population biology of the animal and extending its range by nearly 1,500 km. This study also examined the sympatrically occurring American cownose ray, R. bonasus, and found population structure between the NWA and the GMX and the NWA and the southwestern Atlantic (SWA). High …

Abundance, Site-Fidelity, And Association Patterns Of Coastal Bottlenose Dolphins (Tursiops Truncatus) Off Southeast Florida, Graysen D. Boehning

All HCAS Student Capstones, Theses, and Dissertations

The coastal bottlenose dolphin is well studied throughout its natural range, however, most of the study areas comprised wide, well-protected habitats such as bays and estuaries, and not narrow coastal sandbanks. This study identifies a residential group of coastal bottlenose dolphins utilizing the narrow sandbanks within the Northwestern Atlantic waters off the coast of Palm Beach County, Florida, USA. From 2014-2020, 313 boat surveys were conducted, and 585 individual dolphins were identified using photo-ID. Twenty-four animals were determined to be full-time and 66 animals were determined to be part-time residents. Full-time and part-time residents associated in three social tribes, with …

Critical Corridor: Survey Of Predator Occurrence And Habitat Use In A Threatened Rainforest Protected Area: Comatsa-Sud And Marojejy National Park, Madagascar, Patrick H. Ross

Theses

Madagascar is a nation praised for its floral and faunal endemism and biodiversity. Among the island nation’s most emblematic fauna are its native mammalian carnivores; they are members of the threatened and endemic Eupleridae family. The Corridor of Marojejy – Anjanaharibe Sud – Tsaratanana (COMATSA) is a system of forest protected areas in which three large protected areas are connected in northern Madagascar: Tsaratanana Reserve, Anjanaharibe Sud Special Reserve and Marojejy National Park which is also a UNESCO World Heritage site. COMATSA is a newly protected and currently threatened corridor system that lacks detailed surveys and assessments of its native …

Maternal Responses In The Face Of Infection Risk, Patricia C. Lopes, Brenna M. G. Gormally, Aubrey Emmi, Delilah Schuerman, Chathuni Liyanage, Ursula K. Beattie, L. Michael Romero

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

When animals are sick, their physiology and behavior change in ways that can impact their offspring. Research is emerging showing that infection risk alone can also modify the physiology and behavior of healthy animals. If physiological responses to environments with high infection risk take place during reproduction, it is possible that they lead to maternal effects. Understanding whether and how high infection risk triggers maternal effects is important to elucidate how the impacts of infectious agents extend beyond infected individuals and how, in this way, they are even stronger evolutionary forces than already considered. Here, to evaluate the effects of …

Pilfering Passerines? Inter-Class Competition: A New Direction In Foraging Ecology, Shannon Gillen

Masters Theses, 2020-current

Life in the epigeal layer below leaf litterfall often goes unexplored. Shrews (Soricidae, 1910) have foraged in this microhabitat for millions of years, carving out an existence in harsh habitats around the world, ranging from the tropics to subarctic boreal tundra. Two shrew species that inhabit the Shenandoah Valley of Virginia, the least shrew (Cryptotis parva) and northern short-tailed shrew (Blarina brevicauda), were the focus of this study. Shrews make epigeal foraging trails while they continually forage for food, and caching is a way to save this food for times of low and sporadic food availability. …

The Potential Role Of Phenotypic Plasticity In The Ability Of Hydrocotyle Bonariensis To Occupy Two Different Habitats, Harold Ralph Parsons Iii

Honors College Theses

Phenotypic plasticity is the ability of an organism to change morphology and/or physiology in response to changes in the environment. Hydrocotyle bonariensis is a coastal perennial herb found in both coastal sand dunes and inland coastal plain habitats in Georgia. The purpose of this study was to determine if there were differences in leaf morphology for populations of H. bonariensis in coastal sand dune and inland coastal plain habitats. Leaf morphology and microenvironmental variables were compared between H. bonariensis populations at Tybee Island (TI), GA, representing the coastal sand dune habitat, and Georgia Southern University Armstrong Campus (GSU) in Savannah, …

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield

Biological Sciences Undergraduate Honors Theses

Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …