Population Biology Commons^™

Automated Detection Of Deep-Sea Animals, Dallas J. Hollis, Duane Edgington, Danelle Cline

STAR Program Research Presentations

The Monterey Bay Aquarium Research Institute routinely deploys remotely operated underwater vehicles equipped with high definition cameras for use in scientific studies. Utilizing a video collection of over 22,000 hours and the Video Annotation and Reference System, we have set out to automate the detection and classification of deep-sea animals. This paper serves to explore the pitfalls of automation and suggest possible solutions to automated detection in diverse ecosystems with varying field conditions. Detection was tested using a saliency-based neuromorphic selective attention algorithm. The animals that were not detected were then used to tune saliency parameters. Once objects are detected, …

The Maintenance Of Phenotypic Divergence Through Sexual Selection: An Experimental Study In Barn Swallows Hirundo Rustica, Rebecca Safran, Yoni Vortman, Brittany R. Jenkins, Joanna K. Hubbard, Matt Wilkins, Rachel J. Bradley, Arnon Lotem

School of Biological Sciences: Faculty Publications

Previous studies have shown that sexual signals can rapidly diverge among closely related species. However, we lack experimental studies to demonstrate that differences in trait-associated reproductive performance maintain sexual trait differences between closely related populations, in support for a role of sexual selection in speciation. Populations of Northern Hemisphere distributed barn swallows Hirundo rustica are closely related, yet differ in two plumage-based traits: ventral color and length of the outermost tail feathers (streamers). Here we provide experimental evidence that manipulations of these traits result in different reproductive consequences in two subspecies of barn swallow: (H. r. erythrogaster in North …

Effect Of The 2013-2015 California Drought On Small Mammal Abundance And Diversity In Chaparral, Oak Woodland And Riparian Habitats, Nicole Desideri

Biological Sciences

Long-term biodiversity surveys are a useful tool for assessing the impacts of stochastic events on wildlife and their communities. A recent stochastic event to affect the state of California is the historic 2013-2015 drought. This drought, described as a one-in-one-thousand year event, brought precipitation to a historic low; the statewide rainfall reaching 34% below average (Swain et al. 2014). While humans are feeling the impact of this water shortage, the effects on native ecosystems and wildlife populations are poorly documented. Baseline small mammal biodiversity data collected in 2011, before the drought, allows us the opportunity to study the impacts of …

Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro

Undergraduate Honors Theses

Armored scale insects (Hemiptera: Diaspididae) are some of the most invasive insects in the world. These cryptic plant parasites are most often encountered in managed agricultural ecosystems, but very little is known about their distribution, abundance, and diversity in tropical rainforest canopies, where they are likely to have their highest diversity. Because these ubiquitous insects are extreme generalists with undirected dispersal, their diversity (alpha and beta) accumulation can conceivably be modeled according to tenets derived from island biogeography theory. For example, one expectation is that older established trees should boast a higher species diversity and abundance than younger ones. Other …

The Origin And Expansion Of The Eastern Red Fox, Adrienne Egge Kasprowicz

LSU New Orleans Theses and Dissertations

When new populations are first identified in a region there are multiple potential sources: introduction of a non-native species, extra-range expansion of a nearby population, or demographic growth of a previously unnoticed species. Red foxes were absent or rare in the mid-eastern portion United States until the late 1800s. Their origins potentially include natural population increase/expansion, translocations from Europe, and, eventually, 20th century fur farming. In this study I attempt to identify the relative impact of native expansion versus human mediated introductions of both colonial era European foxes and early 20^th century fur-farm foxes on the establishment of red …

Reef Fish Spatial Distribution And Benthic Habitat Associations On The Southeast Florida Reef Tract, Dana Fisco

HCNSO Student Theses and Dissertations

The Florida Reef Tract (FRT) extends from the tropical Caribbean up the southeast coast of Florida into a temperate environment where tropical reef assemblages diminish with increasing latitude. This study used data from a three-year comprehensive fishery-independent survey to quantify reef fish spatial distribution along the Southeast FRT and define where the assemblage shifts from tropical to temperate. A total of 1,676 reef fish visual census samples were conducted to assess the populations on a stratified-random selection of sites of marine hardbottom habitats between the Miami River and St. Lucie inlet. Multivariate analyses were used to investigate differences in assemblages …

Acoustic Detection Reveals Fine-Scale Distributions Of Myotis Lucifugus, Myotis Septentrionalis, And Perimyotis Subflavus In Eastern Nebraska, Jeremy A. White, Cliff Lemen, Patricia Freeman

School of Natural Resources: Faculty Publications

ABSTRACT.—Before white-nose syndrome arrives in Nebraska, it is important to document the preexposure distributions of cave bats in the state. We examined the distributions of Myotis lucifugus (little brown myotis), Myotis septentrionalis (northern long-eared myotis), and Perimyotis subflavus (tri-colored bat) in eastern Nebraska by setting acoustic detectors for a single night at 105 sites in wooded habitats during summers of 2012 and 2014. We compared 2 methods of determining presence at each site. Results of our analyses are fine-scale distributional maps for these bats and some range extensions from published records. Results for M. septentrionalis and P. subflavus are largely …

Diversity-Dependent Cladogenesis Throughout Western Mexico: Evolutionary Biogeography Of Rattlesnakes (Viperidae: Crotalinae: Crotalus And Sistrurus), Christopher Blair, Santiago Sánchez-Ramírez

Publications and Research

Rattlesnakes (Crotalus and Sistrurus) represent a radiation of approximately 42 species distributed throughout the New World from southern Canada to Argentina. Interest in this enigmatic group of snakes continues to accrue due, in part, to their ecomorphological diversity, contributions to global envenomations, and potential medicinal importance. Although the group has garnered substantial attention from systematists and evolutionary biologists for decades, little is still known regarding patterns of lineage diversification. In addition, few studies have statistically quantified broad-scale biogeographic patterns in rattlesnakes to ascertain how dispersal occurred throughout the New World, particularly among the different major biomes of the …

Avifaunal Community Composition In A Tropical Forest Corridor: A Case Study From The Atherton Tableland, North Queensland, Don Jones

Independent Study Project (ISP) Collection

Bird communities in tropical forest ecosystems are highly threatened by habitat loss and fragmentation. Replanted corridors connecting isolated forest remnants are a popular method of ameliorating certain negative impacts of habitat fragmentation. Such linkages can theoretically facilitate greater dispersal, increase gene flow, and reduce the risk of local extinctions in forest birds. However, relatively few studies have examined the utilization of reforested corridors by birds, and little hard data exists to support claims that this type of resource and time intensive project is the best use of often scarce funding for conservation. This study examined the avifaunal community present in …

Population Genetic Divergence Of Isle Royale Pearl Dace, Margarita Margariscus (Cyprinidae)., John F. Elder Jr., Jack R. Martin, Isaac J. Schlosser, Larry Kallemeyn

Georgia Journal of Science

In 1949, Hubbs and Lagler described morphological variation among pearl dace (Margariscus margarita) of inland lakes on Isle Royale, Michigan. For Harvey Lake, Hubbs and Lagler, proposed that pearl dace were sufficiently morphologically distinct to warrant subspecific status. They argued that divergence of the Harvey Lake pearl dace was due to allopatric differentiation in isolation from lower elevation lakes. Harvey Lake has been isolated by elevation from lower elevation lakes for approximately 10 to 15 thousand years. No genetic studies have been done on Isle Royale pearl dace to evaluate this hypothesis to date. Here we report the analysis of …

Comparative Population Genomics Of Latitudinal Variation In Drosophila Simulans And Drosophila Melanogaster, Heather E. Machado, Alan O. Bergland, Katherine R. O'Brien, Emily L. Behrman, Paul S. Schmidt, Dmitri A. Petrov

School of Biological Sciences: Faculty Publications

Examples of clinal variation in phenotypes and genotypes across latitudinal transects have served as important models for understanding how spatially varying selection and demographic forces shape variation within species. Here, we examine the selective and demographic contributions to latitudinal variation through the largest comparative genomic study to date of Drosophila simulans and Drosophila melanogaster, with genomic sequence data from 382 individual fruit flies, collected across a spatial transect of 19 degrees latitude and at multiple time points over 2 years. Consistent with phenotypic studies, we find less clinal variation in D. simulans than D. melanogaster, particularly for the autosomes. Moreover, …

High Genetic Diversity But Low Population Structure In The Frog Pseudopaludicola Falcipes (Hensel, 1867) (Amphibia, Anura) From The Pampas Of South America, José A. Langone, Arley Camargo, Rafael O. De Sá

Biology Faculty Publications

Relative to South America’s ecoregions, the temperate grasslands of the Pampas have been poorly studied from a phylogeographic perspective. Based on an intermediate biogeographic setting between subtropical forest (Atlantic Forest) and arid ecosystems (Chaco and Patagonia), Pampean species are expected to show unstable demographic histories due to the Quaternary climatic oscillations. Herein, we investigate the phylogenetic relatedness and phylogeographic history of Pseudopaludicola falcipes, a small and common frog that is widely distributed across the Pampean grasslands. First, we use molecular data to assess if P. falcipes represents a single or multiple, separately evolving cryptic lineages. Because P. falcipes is …

An Update On Mortality Of Fledged Whooping Cranes In The Aransas/Wood Buffalo Population, Thomas V. Stehn, Carey L. Haralson-Strobel

Proceedings of the North American Crane Workshop

From winter 1950 through spring 2011, 6,364 whooping cranes (Grus americana) overwintered at Aransas National Wildlife Refuge, or rarely, elsewhere. Documented winter losses amounted to 105 birds dead or disappeared. About 20% of total losses occurred in the wintering area, where birds spend 5 to 6 months of the year including a few birds that over-summer. Losses of white-plumaged whooping cranes on the summering area in Canada appear to be low with only 3 instances documented. The most significant losses seem to occur in migration and may comprise over 80% of the annual mortality. Migration involves only 17-20% of the …

Use Of Freshwater Ponds By Whooping Cranes During A Drought Period, Karis Ritenour, Elizabeth Smith, Barry K. Hartup

Proceedings of the North American Crane Workshop

Whooping cranes (Grus americana) spend nearly half their annual cycle in coastal habitats within and around the Aransas National Wildlife Refuge Complex (ANWRC) located in the central portion of the Texas Coast. When drought conditions prevail in their winter range and salinities in the local bays exceed 23 parts per thousand (ppt), whooping cranes must seek alternate sources of dietary drinking water (Stehn 2008, Chavez- Ramirez and Wehtje 2012). They begin frequent (often daily) trips to freshwater sources in upland areas. These trips may result in extra energy expenditures that can impact their overall health and ability to …

Proceedings Of The Thirteenth North American Crane Workshop, Abstracts, David A. Aborn, Richard P. Urbanek

Proceedings of the North American Crane Workshop

AGE-SPECIFIC SURVIVAL OF GREATER SANDHILL CRANE COLTS IN NEVADA. Chad August, Jim Sedinger, and Chris Nicolai 111

WHOOPING CRANE DISTRIBUTION AND HABITAT USE: PAST, PRESENT, AND FUTURE? Jane Austin, Matthew Hayes, and Jeb Barzen 111

BEHAVIORAL MOVEMENTS OF ARANSAS-WOOD BUFFALO WHOOPING CRANES: ANOMALIES OR INDICATIONS OF WAYS TO FURTHER ENHANCE SPECIES RECOVERY. David Baasch, Mark Bidwell, Wade Harrell, Kris Metzger, Aaron Pearse, and Mary Harner 112

INFLUENCES ON NEST SUCCESS IN A REINTRODUCED POPULATION OF WHOOPING CRANES. Jeb Barzen, Sarah Converse, Peter Adler, Elmer Gray, Anne Lacy, Eva Szyszkoski, and Andrew Gossens 113

DETERMINING DIET COMPOSITION AND INGESTION RATE OF …

Size Difference In Whooping Cranes Reared For Two Reintroduction Methods, Richard P. Urbanek, Marianne M. Wellington, Sabrina Servanty

Proceedings of the North American Crane Workshop

We investigated a possible size difference in whooping cranes (Grus americana) captive-reared for 2 reintroduction methods to establish a migratory population in eastern North America. Cranes reared for ultralight aircraft-led migration (UL) to Florida were significantly larger than cranes reared for direct autumn release (DAR) on the natal area in central Wisconsin. Mean tarsal length was 315.5 ± 0.98 (1 SE) and 308.1 ± 1.87 mm, respectively, for UL and DAR males and 296.9 ± 1.03 and 290.8 ± 2.60 mm, respectively, for UL and DAR females. Because of the different rearing schedules, eggs for the DAR method …

Effects Of Wind Farms On Sand Hill Crane Play An Occupancy On The Texas High Plains, Laura Navarrete, Kerry L. Griffis-Kyle

Proceedings of the North American Crane Workshop

Wind energy is essential for a shift to carbon-emission free energy, however there has been very little research investigating the disturbance caused by wind farms on the landscape. Texas is a leading state in wind power capacity, and the High Plains of Texas support over 80% of the midcontinent population of sandhill cranes (Grus canadensis) every winter. Historically, cranes used saline lakes for fresh water and predator protection, but recent hydrological changes due to agricultural practices have reduced the availability of the lakes for wintering birds. Playa wetlands currently represent the main source of water and roosting habitat in the …

High Nest Density Of Sandhill Cranes In Central Wisconsin, Jeb A. Barzen, Liying Su, Anne E. Lacy, Andrew P. Gossens, Dorn M. Moore

Proceedings of the North American Crane Workshop

We conducted aerial surveys to determine nest locations of greater sandhill cranes (Grus canadensis tabida) in central Wisconsin, 2001-2003. Helicopter flights covered 8.90 km2 of wetlands in each year, and we found 41 nests in 2001, 50 nests in 2002, and 48 nests in 2003 from 11 wetlands. Our best estimate of nest density (n = 14) included wetlands containing 5 or more nests and averaged 5.25 ± 0.36 (1 SE) nests/km² of wetland. Maximum nest density of larger wetlands in any 1 year was 7.80 nests/km². As some nests had likely failed by …

Evaluation Of A Nutraceutical Joint Supplement In Cranes, Kendra L. Bauer, Ellen S. Dierenfeld, Barry K. Hartup

Proceedings of the North American Crane Workshop

Osteoarthritis is a problem that threatens the reproductive capabilities of captive populations of endangered cranes. In our pilot study, we used 5 cranes with a history of unilateral, chronic tarsal pathology in a cross-over design to gauge the effects of the primary ingredient (NEM®, ESM Technologies LLC, Carthage, MO) of the nutraceutical Steadfast® (Novus Nutrition Brands, LLC, St. Charles, MO). We evaluated the ingredient for acceptance, safety, and short-term efficacy. To evaluate efficacy, we collected goniometric measures to determine range of motion in each tarsal joint before and after a 5-week experimental period where NEM® was offered in pelleted feed. …

Hematology Results From Experimental Exposure Of Sandhill Cranes To West Nile Virus, Glenn H. Olsen

Proceedings of the North American Crane Workshop

West Nile virus (WNV), a Flavivirus, was introduced into New York City in 1999 (Centers for Disease Control 1999, Enserink 1999). In the past decade the virus has spread across the continental United States and southern Canada, resulting in large numbers of deaths among native bird species (Anderson et al. 1999, Calle et al. 2000). The U.S. Geological Survey (USGS) Patuxent Wildlife Research Center in Laurel, Maryland, is home to the world’s largest collection of cranes. These cranes are used for research and for reintroduction programs. As of 20 October 2016, this collection included 77 of the highly endangered whooping …

Photoperiod And Nesting Phenology Of Whooping Cranes At Two Captive Sites, Glenn H. Olsen

Proceedings of the North American Crane Workshop

Increasing day length is considered to be a stimulus to breeding in many avian species in northern latitudes (Welty 1975). Crane species that breed in high latitudes include Siberian crane (Leucogeranus leucogeranus), lesser sandhill crane (Grus canadensis canadensis), hooded crane (G. monacha), and whooping crane (G. americana). The first captive breeding records for hooded and Siberian cranes were induced with the use of artificially extended photoperiods (Mirande et al. 1996). Most likely, cranes that breed in mid-latitudes also respond to increasing daylight. In 1 study, captive greater sandhill cranes (G. c. …

Differential Detection Of Territorial And Non-Territorial Greater Sandhill Cranes In Summer, Lindsey F. Mckinney, Jeb A. Barzen, Jason D. Riddle, Shelli A. Dubay, Tim F. Ginnett

Proceedings of the North American Crane Workshop

Abundance estimates allow wildlife managers to make informed management decisions, but differential detectability of individuals can lead to biased estimates of abundance. Our objective was to quantify detectability for non-territorial and territorial sandhill cranes (Grus canadensis tabida) during summer. We hypothesized that territorial sandhill cranes would be detected more often than non-territorial cranes. In 2009, 3 wetland areas were surveyed 2 days per week during the nesting season near Briggsville, Wisconsin. We created capture histories for color-marked territorial (n = 52) and color-marked nonterritorial cranes (n = 23) and used the Huggins closed capture model in …

Serum Chemistry, Blood Gas, And Physiological Measures Of Sandhill Cranes Sedated With Alpha-Chloralose, Richard R. Sim, Barry K. Hartup

Proceedings of the North American Crane Workshop

Capture techniques that lessen handling stress may also lessen pathologic influences on physiologic measures, improving the validity of these measures for use in individual health assessment of freeranging wildlife. Since 1990, the International Crane Foundation (ICF) has successfully used chemical immobilization with alpha-chloralose (AC; C₆H₁₁Cl₃O₆), a chloral derivative of glucose, to facilitate captures of sandhill cranes (Grus canadensis tabida) for ecological studies (Hayes et al. 2003). Although this chemical has been used orally for the immobilization of many species, the physiologic effects of AC are not well understood in cranes. …

Tylosin Tartrate Promotes Resolution Of Insect Bite Hypersensitivity Reactions In Captive Cranes, Alina Kelman, Barry K. Hartup

Proceedings of the North American Crane Workshop

Previous research has described significant serum protein electrophoretic changes associated with intense periocular swelling in several crane species, typical of Type I hypersensitivity reactions, and thought to be the result of insect bites (Hartup and Schroeder 2006). We reviewed medical records for treatment plans and outcomes from 58 cases of insect hypersensitivity reactions observed in a diverse collection of captive cranes at the International Crane Foundation, Baraboo, Wisconsin. The purpose of this study was to fully describe the epidemiological and clinical characteristics of these cases, and determine the efficacy of treatment of these cases with tylosin tartrate, a macrolide antibiotic. …

Timing Of Family Dissociation Does Not Affect Long-Term Survival Estimates Of Sandhill Crane Chicks, Matthew A. Hayes, Jeb A. Barzen

Proceedings of the North American Crane Workshop

Sandhill crane (Grus canadensis) chicks depend on their parents beyond fledging, but timing of chick separation from their parents has rarely been quantified and reported. We color-banded and radio-tagged sandhill crane chicks on known natal territories in south-central Wisconsin and monitored family groups to determine age of chick independence. Using a Cormack-Jolly-Seber open population model in program MARK, we estimated survival for chicks that dissociated from their parents prior to fall migration, over winter (including migration), and following spring migration. Of 96 chicks with a known timing of dissociation from their parents, 11 (12%) became independent from their …

Distribution, Densities, And Ecology Of Siberian Cranes In The Khroma River Region Of Northern Yakutia In Northeastern Russia, Inga P. Bysykatova, Gary L. Krapu, Nicolai I. Germogenov, Deborah A. Buhl

Proceedings of the North American Crane Workshop

The Siberian crane (Grus leucogeranus) is the third rarest crane species in the world with a breeding range now centered on 3 core areas and a buffer zone in the arctic of northern Yakutia in northeastern Russia. During 16 July-2 August 2009, we undertook ground surveys within the Khroma River core breeding area, surrounding buffer zone, and lands lying to the west of the known breeding range to estimate densities and determine habitat use and social status of Siberian cranes. A total of 142 Siberian cranes were sighted (including 55 pairs) at 54 locations with 32 cranes (including 13 pairs) …

Proceedings Of The 13th North American Crane Workshop Abstracts

Proceedings of the North American Crane Workshop

AGE-SPECIFIC SURVIVAL OF GREATER SANDHILL CRANE COLTS IN NEVADA Chad August, Jim Sedinger, and Chris Nicolai 111

WHOOPING CRANE DISTRIBUTION AND HABITAT USE: PAST, PRESENT, AND FUTURE? Jane Austin, Matthew Hayes, and Jeb Barzen 111

BEHAVIORAL MOVEMENTS OF ARANSAS-WOOD BUFFALO WHOOPING CRANES: ANOMALIES OR INDICATIONS OF WAYS TO FURTHER ENHANCE SPECIES RECOVERY. David Baasch, Mark Bidwell, Wade Harrell, Kris Metzger, Aaron Pearse, and Mary Harner 112

ON NEST SUCCESS IN A REINTRODUCED POPULATION OF WHOOPING CRANES .Jeb Barzen, Sarah Converse, Peter Adler, Elmer Gray, Anne Lacy, Eva Szyszkoski, and Andrew Gossens 113

DETERMINING DIET COMPOSITION AND INGESTION RATE OF CRANES …

Proceedings Of The Thirteenth North American Crane Workshop, 14–17 April 2014, Lafayette, Louisiana, Usa, David A. Aborn, Richard P. Urbanek

Proceedings of the North American Crane Workshop

RESEARCH PAPERS

HABITAT SELECTION BY BREEDING SANDHILL CRANES IN CENTRAL WISCONSIN. Tamara P. Miller and Jeb A. Barzen 1

HIGH NEST DENSITY OF SANDHILL CRANES IN CENTRAL WISCONSIN.Jeb A. Barzen, Liying Su, Anne E. Lacy, Andrew P. Gossens, and Dorn M. Moore 13

DIFFERENTIAL DETECTION OF TERRITORIAL AND NON-TERRITORIAL GREATER SANDHILL CRANES IN SUMMER. Lindsey F. McKinney, Jeb A. Barzen, Jason D. Riddle, Shelli A. Dubay, and Tim F. Ginnett 25

TIMING OF FAMILY DISSOCIATION DOES NOT AFFECT LONG-TERM SURVIVAL ESTIMATES OF SANDHILL CRANE CHICKS Matthew A. Hayes and Jeb A. Barzen 33

A REVIEW OF FALL SANDHILL CRANE MIGRATION …

Nesting Activity Budgets And Antipredator Behaviors Of Mississippi Sandhill Cranes, Jerome J. Howard, Rose Butler Wall, Lauren Billodeaux Mowbray, Scott G. Hereford

Proceedings of the North American Crane Workshop

We studied activity budgets and antipredator behaviors of Mississippi sandhill cranes (Grus canadensis pulla) to determine if parental behavior influenced nest outcomes. We used infrared motion-activated cameras to capture behavioral sequences from 21 nests over a 2-year period. Overall activity budgets were similar among crane pairs regardless of nest outcome. Specific activity patterns did predict nest outcomes; pairs at unsuccessful nests spent more time away from the nest and more time manipulating nest contents than successful pairs, while pairs at nests that were lost to predation cooperated poorly and started the nest a month later on average than …

An Update Of The Family-Level Taxonomy Of Vascular Plants In Mongolia, M. Urgamal, Ch. Sanchir

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

A new comprehensive checklist of Mongolian vascular plant families includes descriptions of all accepted plant families, each with a basionym, homonym, and full list of synonyms. The list is a completely revised update of GUBANOV’s conspectus (1996) of the Mongolian flora. The currently list covers a total of 3,113 species, subspecies and 683 genera, 112 families of vascular plants, belonging to 39 orders, 14 classes or clades and 5 divisions of the vascular plants in the flora of Mongolia.