Population Biology Commons^™

An Ecological Survey Of East Texas Salamanders Across The Camp Tyler Outdoor Field School In Smith County, Texas, Justin C. Hunt

Biology Theses

Amphibians are a unique class of organisms with a very long and storied evolutionary history of survival. Many modern amphibian clades occupy several vital ecological roles within their native freshwater environments. One of these roles, typically includes functioning as an ecological indicator species, whereby the presence of stable and diverse populations of many amphibian species, including salamanders, within a freshwater ecosystem have long been considered ecological indicators of good habitat quality and stable ecosystem health. Similarly, salamanders also function as important members of their local food webs and act as valuable mediators of complex trophic hierarchies to facilitate nutrient cycling …

2023 Coordinated Spring Survey Of Mid-Continent Sandhill Cranes, Terry Liddick

United States Fish and Wildlife Service: Publications

The aerial transect portion of the coordinated spring survey of mid-continent Sandhill cranes was conducted on March 22, 2023 in Nebraska’s Central Platte and North Platte River valleys (United States). The 2023 photo-corrected aerial estimate is 1,259,000 birds. Outside the traditional aerial transect portion, observers conducted ground surveys during the period March 20–22. From these regions, observers in the Official Survey Area (OSA) of Nebraska, Kansas, Texas, Oklahoma, and Wyoming reported an additional 25,363 cranes. The 2023 total estimate (1,284,500) increased 43.1% from 2022. The current three-year average (2021–2023 with no photo correction in 2021), based on photo corrected estimates …

Holocene Rice Rats (Genus Oryzomys) From The Upper Mississippi River Drainage Basin, Hugh H. Genoways

Zea E-Books Collection

The expansion and collapse of the geographic range of the Texas rice rat (Oryzomys texensis) in the upper Mississippi River drainage basin at the end of the Holocene was a unique event in North American mammals. In a period of about 4000 years with a point of origin near the American Bottom in Illinois, these small rodents extended their geographic range in a straight-line distance of over 950 km to the west into Nebraska and the same distance to the east into Pennsylvania. Then in less than 400 years this range expansion collapsed back to a point where …

Development Of A 16s Reference Library For Edna Metabarcoding The Freshwater Fishes Of Western Ecuador., Hannah M. Willis, Olivia G. Schweikart, Windsor E. Aguirre

DePaul Discoveries

This project examines the use of the 16S locus to amplify neotropical freshwater fishes native to Western Ecuador in a newly created 16S reference library for DNA barcoding and eDNA metabarcoding applications. Among the orders Characiformes, Siluriformes, Cichliformes, Gobiiformes, Cryprinodontiformes, Gymnotiformes, and Perciformes, a compendium of 105 specimens were sequenced, with 43 representing new 16S sequences previously unavailable on Genbank.

Nou Spring Field Days And Annual Meeting. Valentine, May 5-7, 2023

Nebraska Bird Review

The NOU Annual Meeting and Spring Field Days was held in Valentine on May 5-7, 2023, with 50 in attendance. Our meetings and meals took place in the Niobrara Lodge. Field trips were led by Robin Harding, William Flack, T. J. Walker, Dave Heidt, Mark Brogie and Don and Janis Paseka. Destinations included Thomas Creek WMA, Cub Creek Recreation Area, the Niobrara Valley Preserve (TNC Property), the river road from Meadville (SW of Springview) to Norden, the Valentine City Park, Valentine Fish Hatchery, Ft. Niobrara NWR, Anderson Bridge WMA, the Minnechaduza Creek crossing north of Kilgore, Steer Creek, Merritt Reservoir, …

Rethinking The Status And Temporal Occurrence Of The American Woodcock In Nebraska Because Of Its Unusual Life History, Joel G. Jorgensen, Stephen J. Brenner

Nebraska Bird Review

Historical distribution and range expansion -- We reviewed existing information to evaluate conclusions by previous authors (e.g., Sharpe et al. 2001, Silcock and Jorgensen 2023) that woodcock have expanded their range west since settlement of Nebraska by Euro-Americans. We also provide additional context about the species’ distribution over time using regional resources.

Temporal occurrence and abundance -- We used data from woodcock outfitted with satellite transmitters 2021-2022 and compared it with occurrence data from two sources, eBird (eBird.org 2023) from all years through 2022 and the SFRs in the Nebraska Bird Review 1994–2019. We chose not to use SFR data …

Spring Field Report, March - May 2023, W. Ross Silcock

Nebraska Bird Review

First off, I want to reiterate that reports compiled for this Spring Seasonal Report are evaluated against current knowledge as presented in Birds of Nebraska-Online (“BONO”; https://birds.outdoornebraska.gov/). Species whose reports do not add new information on distribution, early or late dates, etc., are listed as having “Routine reports”. Please let me know at [email protected] if you have information that is not in BONO, or if you have additions and/or corrections of information in BONO. Another reminder: if evidence of breeding is observed, please enter the appropriate descriptor in your eBird checklist under “Breeding and Behavior Code”. These descriptors can be …

The Nebraska Bird Review: A Magazine Of Ornithology Of The Nebraska Region. Volume 91 June 2023 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2023 by W. Ross Silcock …46

Correction to 2022-2023 Christmas Bird Count tally ….70

Rethinking the Status and Temporal Occurrence of the American Woodcock in Nebraska because of its Unusual Life History by Joel G. Jorgensen and Stephen J. Brenner …71

NOU Spring Field Days and Annual Meeting in Valentine, May 5-7, 2023 …..84

Subscription and Organization Information …91

Feral Swine As Indirect Indicators Of Environmental Anthrax Contamination And Potential Mechanical Vectors Of Infectious Spores, Rachel M. Maison, Maggie R. Priore, Vienna R. Brown, Michael Bodenchuk, Bradley R. Borlee, Richard Bowen, Angela M. Bosco-Lauth

United States Department of Agriculture Wildlife Services: Staff Publications

U.S. government work

A Camera Trap Study Of Scavenger Species On The University Of Mississippi Campus, Lise Larsen

Honors Theses

This is a camera trap study to understand what kind of mammalian scavenger community we have on the University of Mississippi campus and where they are most prominent. Three motion-triggered cameras were used to survey ten buildings on campus over ten weeks. A low number of individuals were caught on camera during this study. There were limitations on this study such as a low number of cameras and a short span of time. More research needs to be done to understand the scavenger community on this campus.

Evaluation Of Nutrient Digestibility Of Weaned Calves From Early And Late Shedding Dams, Jennifer Keele

Theses and Dissertations

Researchers have investigated several factors that could alter fetal growth, including nutrient restriction (Valiente et al., 2021), hair shedding (Gray et al., 2011), and extreme hot and cold temperatures (Davidson et al., 2022). Hot temperatures and increased humidity percentages in the southeast United States caused researchers to investigate the hair coats of Angus cattle in the commercial production setting. An improvement in fiber digestibility and calf birth and weaning weights has been observed in Angus dams that shed 50% of the winter hair coat by May (Gray et al., 2011; Burnett et al., 2021). Our objective of this experiment was …

Du Undergraduate Showcase: Research, Scholarship, And Creative Works, Caitlyn Aldersea, Justin Bravo, Sam Allen, Anna Block, Connor Block, Emma Buechler, Maria De Los Angeles Bustillos, Arianna Carlson, William Christensen, Olivia Kachulis, Noah Craver, Kate Dillon, Muskan Fatima, Angel Fernandes, Emma Finch, Colleen Cassidy, Amy Fishman, Andrea Francis, Stacia Fritz, Simran Gill, Emma Gries, Rylie Hansen, Shannon Powers, Jacqueline Martinez, Zachary Harker, Ashley Hasty, Mykaela Tanino-Springsteen, Kathleen Hopps, Adelaide Kerenick, Colin Kleckner, Ci Koehring, Elijah Kruger, Braden Krumholz, Maddie Leake, Lyneé Alves, Seraphina Loukas, Yatzari Lozano Vazquez, Haley Maki, Emily Martinez, Sierra Mckinney, Audrey Mitchell, Kipling Newman, Audrey Ng, Megan Lucyshyn, Andrew Nguyen, Stevie Ostman, Casandra Pearson, Alexandra Penney, Julia Gielczynski, Tyler Ball, Anna Rini, Christina Rorres, Simon Ruland, Helayna Schafer, Emma Sellers, Sarah Schuller, Claire Shaver, Kevin Summers, Isabella Shaw, Madison Sinar, Claudia Pena, Apshara Siwakoti, Carter Sorensen, Madi Sousa, Anna Sparling, Alexandra Revier, Brandon Thierry, Dylan Tyree, Maggie Williams, Lauren Wols

DU Undergraduate Research Journal Archive

DU Undergraduate Showcase: Research, Scholarship, and Creative Works

Striped Blenny (Chasmodes Bosquianus) Presence And Behavior Between Sunrise And Sunset At Oyster Landing, South Carolina, Madeline Schuetze

Honors Theses

Lunar and diel cycles of fishes can help to interpret their behaviors during their reproductive season. Temperate estuaries are used by many benthic fishes for shelter and reproduction. This study examined the behavior and presence of striped blennies (Chasmodes bosquianus) during diel and lunar cycles. PVC pipe shelters were placed to mimic oyster shell nests, a natural habitat for blennies, and cameras were placed to monitor these shelters in April, May, and June 2022, during the striped blenny reproductive period. Video footage was reviewed and analyzed for the presence and behavior of both male and female blennies. Male presence …

Effect Of Temperature On The Microbiome Of A Laboratory Reared Colony Of Haemaphysalis Longicornis Ticks, Brianna Mitchell

Poster Presentations

Honors research poster.

Haemaphysalis longicornis is a species of tick native to eastern Asia, including eastern China, Japan, eastern Russia, and Korea. To date, it has invaded and has now established its existence in Australia, New Zealand, and several of the Pacific Islands. This species of tick has recently been introduced to the United States, having a confirmed sighting in November 2017 on a sheep farm in New Jersey and since establishing populations in 18 states along the east coast and Appalachia. Based on the existing locations of H. longicornis in its native regions, as well as in the United …

Effect Of Temperature On The Microbiome Of A Laboratory-Reared Colony Of Haemaphysalis Longicornis Ticks, Brianna L. Mitchell

Honors Theses

Haemaphysalis longicornis ticks are invasive to the United States with potential to transmit several tick-borne pathogens that are native to the United States. Based on existing locations of H. longicornis in its native regions in Asia, as well as its invasive populations that are established in the United States, several geographic range prediction models have been produced to help understand future range expansion and distribution of this invasive tick in North America. Unfortunately, these models do not all agree and there is uncertainty associated with the potential geographic range expansion of H. longicornis ticks in North America. Climate can affect …

Optimal R&D Investment In The Management Of Invasive Species, William Haden Chomphosy, Dale T. Manning, Stephanie A. Shwiff, Stephan Weiler

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive alien species (IAS) threaten world biodiversity, ecosystem services, and economic welfare. While existing literature has characterized the optimal control of an established IAS, it has not considered how research and development (R&D) into new removal methods or technologies can affect management decisions and costs over time. R&D can lower the costs of control in a management plan and creates an intertemporal trade-off between quick but costly control and gradual but cheaper removal over time. In this paper, we develop and solve a continuous time dynamic optimization model to study how investment in R&D influences the optimal control of an …

Assessing The Dynamics Of The Southeast Florida Shark Community From 2013-2019 Via Catch Per Unit Effort And Stable Isotope Analysis, Alexandra Barth

All HCAS Student Capstones, Theses, and Dissertations

Sharks, as well as other top predators, are in drastic decline worldwide. As apex and near-apex predators, species such as nurse, lemon, and tiger sharks maintain balanced marine ecosystems by enacting top-down trophic control. However, this cascading effect is diminished with exploitation via commercial and recreational fishing. Sharks are generally long-lived, mature late, have long reproductive cycles, and produce few offspring. Much remains to be learned about the community structure, population trends and conservation statuses of shark populations worldwide. Comprehensive studies on the composition of the shark community in Southeast Florida north of Miami have been limited. This study assessed …

Cats Of Unl: An Investigation Into The Human-Feral Cat Relationships On A University Campus In Nebraska, Jacey Skoda

Honors Program: Senior Projects (Public)

At the University of Nebraska-Lincoln (UNL), there exists a population of feral cats that is monitored and cared for by a group known as Husker Cats. As the cats wander the sidewalks and gardens of the university, they may appear non-threatening and pleasant to have around. However, a feral cat presence could have detrimental impacts on the surrounding ecosystem, property, and community. The first component of this project, a survey of individuals on UNL campus, ultimately seeks to understand what those in the UNL community know about the feral cats, how they feel about the feral cats, and how they …

Comparison Of Channel Catfish Populations In Two Northeast Kansas Impoundments, Ethan Thompson

2023 Midwest Ecology & Evolution Conference

In the summer of 2022, we sampled Channel Catfish populations at Brown State Fishing Lake and Sabetha City Lake, both located in Northeast Kansas. These impoundments are similar only in latitude and size with several differences in their fish populations, specifically with Channel Catfish. One is stocked annually with 200 mm intermediate Channel Catfish and the other is not. Surprisingly, the impoundment that is not stocked has a higher density of fish than the impoundment that is. This poster will present age, growth, length, and weight information and make inferences on the impacts of population density on those metrics.

Habitat Characteristics And Winter Use Of Woodpecker-Excavated Tree Cavities, Adrianna Yoder

2023 Midwest Ecology & Evolution Conference

Avifauna are in decline in North America, including red-headed woodpeckers (Melanerpes erythrocephalus). Red-headed woodpeckers are negatively impacted by urbanization, which has decreased their ideal habitats of oak-savannas and through the management of urban trees there has been a reduction in the amount of tree decay, a necessary feature of suitable trees that woodpeckers can make cavities in. Cavities are created and used as nests in the breeding season (spring/summer) and as roost-sites in the non-breeding season (fall/winter). In the Chicagoland region, during the fall some red-headed woodpeckers migrate while others do not and remain overwinter, making them facultative …

Highly Pathogenic Avian Influenza A(H5n1) Virus Outbreak In New England Seals, United States, Wendy Puryear, Kaitlin Sawatzki, Nichola Hill, Alexa Foss, Jonathon J. Stone, Lynda Doughty, Dominique Walk, Katie Gilbert, Maureen Murray, Elena Cox, Priya Patel, Zak Mertz, Stephanie Ellis, Jennifer Taylor, Deborah Fauquier, Ainsley Smith, Robert A. Digiovanni, Adriana Van De Guchte, Ana Silvia Gonzalez-Reiche, Zain Khalil, Harm Van Bakel, Mia K. Torchetti, Kristina Lantz, Julianna B. Lenoch, Jonathan Runstadler

United States Department of Agriculture Wildlife Services: Staff Publications

We report the spillover of highly pathogenic avian influenza A(H5N1) into marine mammals in the northeastern United States, coincident with H5N1 in sympatric wild birds. Our data indicate monitoring both wild coastal birds and marine mammals will be critical to determine pandemic potential of influenza A viruses.

Annual Treasurer's Report For 2022, Jan Johnson

Nebraska Bird Review

No abstract provided.

The Nebraska Bird Review: A Magazine Of Ornithology Of The Nebraska Region. Volume 91, Number 1. March 2023, Nebraska Ornithologists’ Union

Nebraska Bird Review

Winter Field Report, Dec. 2022 - Feb. 2023 by W. Ross Silcock

Annual Color Photo Section

Annual Treasurer's Report for 2022 by Jan Johnson

Subscription and Organization Information

2022-2023 Christmas Bird Counts, Don Paseka

Nebraska Bird Review

Sixteen counts were run in the 2022-2023 CBC season. Because of weather and rescheduling issues, the Crawford, Harrison, and Harlan County counts were cancelled. Eight of the counts were completed during the first week of the count period and the other eight were scattered throughout the remainder of the count period. An early December cold snap seemed to drive many of the birds south, but the weather on actual count days was fairly benign: mostly dry with an average high of 34˚F and an average low of 19˚F and with three circles reporting light snow. The total number of species …

The Nebraska Bird Review Annual Color Photo Section

Nebraska Bird Review

Virginia Rail and chick, Washboard Road, North Platte, Lincoln Co., 28 June 2023. Photo by Boni Edwards.

American Coot, Eagle Scout Lake, Hall Co., April 2020. Photo by Colleen Childers.

Hudsonian Godwit, Marsh Wren Community Wetlands, Lancaster Co., 21 May 2022. Photo by Kirill Belashchenko.

American Avocet, N.P. Dodge Park, Omaha, Douglas Co., 2 May 2023. Photo by Thane Dinsdale

Female Cape May Warbler, photographer's backyard, Bellevue, Sarpy Co., 10 May 2022. Photo by Loren Padelford.

Male Cape May Warbler, Ft. Niobrara NWR, Cherry Co., 13 May 2022. Photo by Gordon Warrick.

Tennessee Warbler, Fontenelle Forest Wetlands, Sarpy Co., 24 …

Winter Field Report, Dec. 2022 - Feb. 2023, W. Ross Silcock

Nebraska Bird Review

Since this is a Winter Seasonal Report, it seems appropriate to lead off with notable reports of occurrences that might be considered unexpected for midwinter, of which there were several. A range of species was involved, suggesting an encompassing cause such as climate change. Of interest were northerly wintering groups of waterfowl including Gadwall, Green-winged Teal, Canvasback, Ringnecked Duck, and Hooded Merganser. Reports of wintering Tundra Swans, Whitewinged Doves, and Lesser Goldfinches continue to increase, and numerous Redwinged Blackbirds in the northeast in midwinter were unexpected. Also quite unexpected were two Sandhill Cranes wintering in the east, the state’s first …

Prairie Dogs, Gary Witmer, Jon Grant, Kendra Cross

Wildlife Damage Management Technical Series

Prairie dogs (Cynomys spp.) occur throughout the prairie states of middle North America from Mexico northward into Canada. They occupy a variety of habitats from prairies to high mountain valleys and sage brush-dominated deserts. The most common species is the black-tailed prairie dog (Cynomys ludovicianus; Figure 1). Prairie dogs are considered a “keystone species.” They provide habitat for many other native, grassland species. Prairie dogs live in colonies or “towns” that can span hundreds to thousands of acres. Depending on the species, their presence is evident by their burrow system. Despite the many ecosystem benefits prairie dogs provide by modifying …

Blanding’S Turtle (Emydoidea Blandingii): Species Conservation Assessment, Melissa J. Panella, Colleen Rothe-Groleau

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the Blanding’s turtle (Emydoidea blandingii) as a Tier 1 at-risk species. Some general management recommendations are made here regarding Blanding’s turtles; however, conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of this at-risk turtle that will aid in the decision-making …

An Evaluation Of Avian Influenza Virus Whole-Genome Sequencing Approaches Using Nanopore Technology, Hon S. Ip, Sarah Uhm, Mary Lea Killian, Mia K. Torchetti

United States Department of Agriculture Wildlife Services: Staff Publications

As exemplified by the global response to the SARS-CoV-2 pandemic, whole-genome sequencing played an important role in monitoring the evolution of novel viral variants and provided guidance on potential antiviral treatments. The recent rapid and extensive introduction and spread of highly pathogenic avian influenza virus in Europe, North America, and elsewhere raises the need for similarly rapid sequencing to aid in appropriate response and mitigation activities. To facilitate this objective, we investigate a next-generation sequencing platform that uses a portable nanopore sequencing device to generate and present data in real time. This platform offers the potential to extend in-house sequencing …

What Drives Larval Condition For Northern Anchovy (Engraulis Mordax)? Implications For Coastal Pelagic Species Recruitment Fluctuations And Fishery Management Practices, Michelle Robidas

Theses

Discerning the causes of population boom and bust cycles for coastal pelagic species (CPS) has been a major focus of fisheries management research for over a century. Year-class strength is contingent on larval survival and condition, which can be influenced by larval size at age and growth rate. These two factors, in turn, can be affected by maternal investment and environmental variables such as water temperature, salinity, oxygen, and chlorophyll a. We evaluated each of these factors from 127 two to eight week-old Northern Anchovy (Engraulis mordax) larvae off the coast of San Diego to San Francisco, …