Ecology and Evolutionary Biology Commons^™

Temporal Assessment Of Fish Communities In A South Central Plains Ecoregion Watershed, Tara L. Schnelting

ATU Theses and Dissertations 2021 - Present

Among South Central Plains ecoregion fish communities, there is limited knowledge of the importance of headwaters yet this information is needed to understand their role in fish communities. I addressed this gap by assessing seasonal changes in fish communities in headwater streams of the Moro Creek watershed, Arkansas. I conducted two studies pertaining to temporal fish community assessments: (i) utilize multi-season, community occupancy models to estimate μ (species probability), Ω (community occupancy mean), and p (detection probability) and (ii) utilize beta diversity (β) analyses to address the diversity across different scales in the headwaters of the Moro Creek …

Impact Of Unconventional Gas Extraction On Tributaries Of Tenmile Creek, Greene County, Pennsylvania: A 12-Year Perspective, Christian L. Beall

Electronic Theses and Dissertations

Much of southwestern Pennsylvania has been central to a rapid increase in development for unconventional natural gas extraction in the past two decades. The continued monitoring of streams over their lifetime as extraction sites is pivotal to understanding the effects of fracking on local waterways and their ability to provide for wildlife and human use. Here, using multiple indices of biotic integrity (IBI), I perform analyses of fish and macroinvertebrate communities as well as water chemistry on two streams, Bates Fork (with shale wells) and Fonner Run (without), as part of a follow-up to work performed there from 2010-2012. Fish …

Characterizing Successional Dynamics And Host Impacts On The Big Sagebrush Leaf Microbiome, Jacob A. Heil

Boise State University Theses and Dissertations

The leaf microbiome contributes to the functioning of Earth’s ecosystems through interactions with host plants, modifying their health, for better or for worse. The leaf microbiome contains bacteria, fungi, and other microorganisms that interact with each other and are subject to the processes governing community assembly. Microbial community assembly on the leaf is influenced by host plant characteristics, interactions between the different community members, the selective and dispersal-mediated effects of the weather, and time. To study the effects of a leaf microbiome on its host plant it is first important to characterize it; observing the species present and how they …

Latitudinal Gradients In Arctic Willows And Their Effects On Stream-Riparian Systems, Donal Heaney

Honors Scholar Theses

Extreme warming in the Arctic due to climate change presents the opportunity to study rapid changes to ecosystems and their potential resilience. Willow (Salix) shrubs form the base of many Arctic riparian ecosystems, and they have increased in height and range as temperatures have warmed. The effects of warming on willows could alter riparian ecosystems and neighboring streams, so understanding how climate change will affect willows is integral to understanding how the stream-riparian meta-ecosystem might change. I used data from the EvoME Institute to compare willow canopy cover above Arctic streams along a latitudinal transect and investigate how …

A Population Study Of The Freshwater Turtles Of The Recently Expanded Lake Hydaway In Campbell County, Virginia, Joshua Sorenson

Senior Honors Theses

Freshwater turtles are an important part of the ecological systems in central Virginia. At the recently expanded Lake Hydaway, there are several turtle species for which their population characteristics were unknown, especially the prolific Eastern Painted Turtle (Chrysemys picta picta) and Red-bellied Cooter (Pseudemys rubriventris). For five weeks, the lake was surveyed for turtles using hoop nets, and the turtles were marked and measured. Population characteristics such as carapace length and sex ratio for the Eastern Painted Turtle and Red-bellied Cooter were calculated, as well as population estimates for those two species. The Red-eared Slider ( …

Designing An Optimal Thermal Preference Arena For Southern Cricket Frog (Acris Gryllus) Juveniles, Eleanor E. Briggs, David M. Phillips Jr.

Honors Theses

Climate change has been altering ecosystems across the world at a substantial rate, disrupting the delicate ecophysiological relationships between ecosystems and the organisms that live in them. Ectotherms, such as amphibians, rely on external temperatures to behaviorally thermoregulate, making it especially imperative to study their thermal biology. Thermal preference, which assesses the environmental temperature an organism would seek out in the absence of external stimuli, provides valuable information about an amphibian’s thermal biology and can be used to predict the effects of climate change on a species or population. A commonly used method to measure thermal preference is an arena …

Market Structure Evolution In The U.S. Automobile Industry: A Review Of Diversity And Concentration Metrics, P.V. (Sundar) Balakrishnan

AMTP Proceedings 2025

I examine the evolution of market structure in the U.S. automobile industry from 1937 to the present, focusing on the application of both traditional and novel diversity and concentration metrics. I use the Herfindahl-Hirschman Index (HHI), Comprehensive Concentration Index (CCI), and newer metrics from fields such as ecology and genetics to uncover insights into the shifting dynamics of market power, firm turnover, and industry stability. The U.S. automobile industry, characterized by consolidation and technological advancement, provides a unique case study for analyzing long-term market evolution. I contribute to the literature by synthesizing a broad range of diversity metrics and offering …

Ecology Of Ixodes Scapularis Say: Experimental And Observational Studies With Social Perspectives On Ticks And Tick-Borne Diseases, Kaitlin M. Mcdonald

Dartmouth College Ph.D Dissertations

Tick-borne diseases are a growing concern globally. Understanding the factors that influence tick ecology and people’s understanding of that ecology is crucial for developing effective tick management and disease prevention strategies. In this work, I investigated fundamental questions about the ecology of a primary vector of medically important pathogens in the United States, the blacklegged tick Ixodes scapularis Say, and identified common misconceptions about ticks and tick-borne diseases on social media. First, I examined the effects of temperature and moisture stress on the movement of adult female I. scapularis in laboratory experiments. Using a Drosophila Activity Monitor, ticks were exposed …

Climate Influence On Both Spatial And Temporal Patterns Of Rocky Intertidal Community Structure In San Diego, California, Emily Jenkins

Theses

The rocky intertidal ecosystem, the coastal area between high and low tides, serves as a critical buffer between land and sea. This ecosystem supports a diverse array of species and provides rich opportunities for exploration and education. With the influence of climate change, this ecosystem faces significant shifts in species distribution, resilience and recovery from environmental disturbances, as well as habitat loss (Jackson & McIlvenny 2011; Jueterbock et al. 2013; Menge & Gravem 2022; Rilov et al. 2021; Sagarin & Barry 1999). Between 2014-2016, climate anomalies El Niño (ENSO) and the Pacific Decadal Oscillation (PDO) combined to create a period …

Acoustic Monitoring Of Oak Toads (Anaxyrus Quercicus), A Longleaf Pine (Pinus Palustris) Ecosystem Endemic Amphibian, Alex Ward Foote

Theses, Dissertations and Capstones

The Longleaf pine ecosystem is one of the most endangered ecosystems in the world with only 3% remaining. Many endemic species to the longleaf pine ecosystem are also in decline and suffer from habitat loss resulting from fire exclusion, urbanization, agriculture, and industrial silviculture. Oak Toads (Anaxyrus quercicus) are a longleaf pine ecosystem obligate; the species is experiencing declines across its range and only has protections in Virginia and North Carolina. We used data from an array of Automated Recoding Units across four years (2013, 2014, 2015, 2019) at three state-owned wildlife management areas to capture audio files …

Effects Of In-Stream Large Woody Debris Management On Riparian Salamander Population Dynamics, Sydney Hermann

Theses, Dissertations and Capstones

The addition of large woody debris (LWD) into streams is an increasingly common habitat restoration method used to support brook trout populations and other sensitive freshwater species. Wood jams create localized reductions of water velocity, increase organic matter retention, intensify overbank flows, and promote habitat heterogeneity. These changes enhance interaction between the floodplain and the stream which can influence forest habitat variables such as leaf litter, soil pH, moisture, and invertebrate abundance. Salamander demographics reflect the stability of these forest habitat variables, and population declines can be indicative of environmental disturbance, stress, or change. Evaluating how this trout-targeted management effects …

René Dubos: An Annotated Bibliography, Carol L. Moberg

René Dubos: An Annotated Bibliography

René Dubos (1901–1982), a prominent 20th century scientist, humanist, and philosopher, was a prolific author. Affiliated for more than 50 years with The Rockefeller Institute for Medical Research/The Rockefeller University, his studies ranged from antibiotics and the role of bacteria in human diseases to formulating broad ecological and environmental questions affecting human health and disease. His seminal writings explore a lifelong belief that a living organism—whether microbe, human being, society, or the Earth itself—could be understood only through its relationships with everything else.

This comprehensive bibliography of more than a thousand works by René Dubos includes brief annotations for each …

How Individual Traits Predict Distribution Patterns And Community Convergence, Zachary K. Lange

Biology Dissertations - Archive

One of the fundamental questions in biology is whether natural conditions lead species and communities toward predictable outcomes. Answering this question requires understanding how traits of individual organisms are connected to species- and community-level patterns. In Chapter 2, I examined how thermal physiology and environmental temperatures interact to determine the distribution patterns of Anolis lizards on the Greater Antilles. I combined lab-measured thermal traits (critical thermal minimum: CT_min, critical thermal maximum: CT_max, thermal preference: T_pref) with occurrence and abundance data from 21 species of Anolis lizards collected from extensive mark-resight surveys of communities across …

The Evolution Of The Stress Response In The Trinidadian Killifish: Ecological Drivers And Maternal Mediation, Mikaela E. Feder

Biology Dissertations - Archive

Ecological variables can induce the stress response in organisms. Yet, few studies have tested for evolutionary shifts in stress responses across ecological gradients. In these studies, we used Trinidadian killifish found in sites with predators (high predation, HP) and sites where they are the only fish present (killifish only, KO). HP and KO populations differ in a suite of behavioral and life-history traits, making the Trinidadian killifish an excellent model to examine evolutionary physiology. My dissertation addresses the knowledge gap by examining: (1) how baseline cortisol differs in wild-caught Trinidadian killifish found in HP and KO sites, (2) the influence …

Unveiling The Bacterial Communities Of Aphaenogaster: Taxonomic Composition, Developmental And Species Influences, And The Impact Of Climate Change, Lily Kelleher

West Chester University Master’s Theses

Ants are vital keystone species in many ecosystems because they provide ecosystem services such as: seed dispersal, soil bioturbation, and pest control. However, ant bacterial symbioses remain largely unstudied, but these interactions are crucial because microbes play a vital role in the ants’ overall health. Today, global climate change is impacting our biodiversity, and we can use information about how changing temperatures impact the symbiotic bacterial communities associated with ants to predict future impact. Aphaenogaster rudis and A. fulva remain understudied in terms of their bacterial community and are important North American species. For this study, ants from several colonies …

Acer Rubrum: Descending Towards Forest Dominance, Elyssa L. Pearson, Christopher M. Gough

UROP Posters

Acer rubrum, more commonly known as the red maple, is a hardwood, late successional species of tree commonly planted for its deciduous nature and vibrant coloring of its leaves in the beginning of autumn (Abrams, 1998). The species is very tolerant of varying light and soil moisture levels and often dominates sub and mid-canopy levels of hardwood forests (Missouri Botanical Gardens). It was hypothesized that as the I moved from an upland location to a lowland location near a wetland that the A. rubrum trees would be more productive and have a greater above ground biomass. This was not …

Distribution And Ecology Of The Cedar Keys Mole Skink (Plestiodon Egregius Insularis), Kevin M. Enge, Louis A. Somma, Paul E. Moler, Travis M. Thomas, Matthew T. Fedler, John M. Matter, Dennis C. Haney

Papers in Herpetology

We conducted surveys for the Cedar Keys Mole Skink, Plestiodon egregius insularis (Mount), during 1989– 1999 and 2015–2024, examined museum vouchers, and compiled personal observations from others to determine the status and distribution of this subspecies, which has the smallest geographic distribution of the five subspecies and is being considered for federal listing. We observed Cedar Keys Mole Skinks on Airstrip Island, Atsena Otie, Cedar Point, Deer Island, North Key, Scale Key, Seahorse Key, Snake Key, and possibly Dog Island. We have anecdotal reports of Mole Skinks on Way Key, which contains the most potential habitat and is the main …

Adaptive Evolution Shapes The Transmissibility Of West Nile Virus In New York State, Sean M. Bialosuknia

Electronic Theses & Dissertations (2024 - present)

Arthropod-borne viruses (arboviruses), which are maintained in nature in complex transmission cycles involving hematophagic invertebrates and their vertebrate hosts, are the cause of a significant and expanding global health burden. Defining arbovirus-host interactions is necessary if we are to understand the adaptive and epidemiological potential of arboviruses. The results presented with West Nile virus (WNV Flaviviridae: Orthoflavivirus), are a compilation of such studies. WNV is the most prevalent arboviral pathogen in the U.S. and the most geographically distributed arbovirus in the world. Despite the evolutionary potential of these RNA viruses, WNV and other arboviruses have experienced only limited …

Climate And Gypsum Parent Material Shape Biocrust Communities And Moss Ecology In The Chihuahuan And Mojave Deserts, Nicole Pietrasiak, Katelyn G. Gobbie, Brian Jusko, Rebecca E. Drenovsky

Life Sciences Faculty Research

Biological soil crust communities (biocrusts) establishing on gypsum soils have been well-documented for their prolific appearance and rich diversity of lichens and bryophytes. However, studies characterizing gypsum biocrusts have occurred primarily outside of the U.S., most of which lack comparisons to other soil types. We conducted intensive field surveys to evaluate the ground cover and frequency of biocrust functional groups and moss species on gypsum and non-gypsum soils in the U.S. regions with the most extensive gypsum outcrops, the northern Chihuahuan and eastern Mojave Deserts. Study sites were stratified by geomorphology and paired, so that every gypsum site was matched …

High-Severity Wildfires Alter Ant (Hymenoptera: Formicidae) Foraging Assemblage Structure In Montane Coniferous Forests And Grasslands In The Jemez Mountains, New Mexico, Usa, Jonathan Knudsen, Robert Parmenter, Theodore Sumnicht, Robin M. Verble

Biological Sciences Faculty Research & Creative Works

High-severity wildfires create heterogeneous patterns of vegetation across burned landscapes. While these spatial patterns are well-documented, less is known about the short- and long-term effects of large-scale high-severity wildfires on insect community assemblages and dynamics. Ants are bottom-up indicators of ecosystem health and function that are sensitive to disturbance and fill a variety of roles in their ecosystems, including altering soil chemistry, dispersing seeds, and serving as a key food resource for many species, including the federally endangered Jemez Mountain salamander (Plethodon neomexicanus). We examined the post-fire effects of the 2011 Las Conchas Wildfire on ant communities in the Valles …

Montane Molluscs: Factors Affecting Snails And Their Trematodes Throughout The Mountain Regions Of Arkansas, Taylor Michelle Fiedor

Student Theses and Dissertations

Spatial processes across both broad and fine scales are important for understanding ecosystem function. Broad-scale spatial processes can be defined as elevational, latitudinal, or longitudinal processes whereas fine-scale spatial processes represent movement and dispersal among habitat patches. Historically, studies on freshwater snail distributions have focused on fine-scale processes with secondary consideration given to spatial sampling. Species inventories for freshwater snails are outdated because historically snail species descriptions were based on shell morphology, which is highly plastic. In Arkansas, it is estimated that there are 36 freshwater snail species, but this estimate does not account for shell plasticity and does not …

Of Geese And Grass: Investigating Impacts Of Brant Grazing On Eeelgrass, Dakota L. Osborne

Master's Theses

Grazing pressure is important in structuring plant communities, particularly in aquatic environments. Eelgrass (Zostera marina), a keystone species in estuaries across North America, is experiencing widespread population declines. As a keystone species, eelgrass provides numerous important functions, including: 1) water filtration, 2) sediment stabilization, 3) providing refuge and nursery habitat for numerous species, and 4) carbon sequestration. Benefits which could be lost if eelgrass beds continue to diminish. California has experienced some of the greatest eelgrass declines, and Morro Bay, CA experienced a 96% decrease in eelgrass from 2007 to 2017. Most studies to date have examined bottom-up …

Chinese Tallow Long-Term Impact On Stand Dynamics In A Bottomland Hardwood Forest Following Vegetation Management, Nicklaus R. Langlois

Electronic Theses and Dissertations

Chinese tallow (Triadica sebifera (L.) Small) is an invasive tree known to have negative impacts on bottomland hardwood forests. Chinese tallow is proficient in reproducing and surviving in bottomland hardwood forests because it is more flood and shade tolerant than most native trees. The long-term effectiveness of Chinese tallow control is an important topic to research as only a few long-term studies of Chinese tallow control have been conducted. A 10-year re-measurement of 22 paired plots installed in 2012 on the Pineywoods Mitigation Bank near Diboll, Texas following herbicide treatments examined Chinese tallow and native tree stand structure. Each …

Unraveling The Behavioral Ecology Of The Western Diamond-Backed Rattlesnake (Crotalus Atrox) Through The Lenses Of Personality, Predator-Prey Interactions, And Crypsis, Oceane Da Cunha

Open Access Theses & Dissertations

To thrive in an environment, individuals need to be able to forage efficiently and acquire mates. These resources are limited, and their acquisition depends upon the energy and time an individual chooses to allocate to each activity and the environmental conditions, leading to behavioral trade-offs. Different species, or even different individuals within the same population, respond to these trade-offs by employing contrasting strategies, leading to differential life-history outcomes. The overarching goal of this dissertation is to gain a better understanding of the trade-offs cryptic ambush mesopredators are facing using the western diamond-backed rattlesnake (Crotalus atrox) as a model species. Each …

Unraveling Wetland Ecology: The Effect Of Abiotic Heterogeneity And Habitat Size On Wetland Plant Diversity In The Piedmont, Gregory T. Gilmore

All Theses

Ecosystems around the world are seeing an unprecedented decline in biodiversity. However, to better prevent this decline we cannot only understand the drivers of biodiversity loss, but also the factors that support diversity. Traditional ecological hypotheses such as the Habitat Heterogeneity Hypothesis (HHH) and the Theory of Island Biogeography (TIB) have provided frameworks for understanding biodiversity drivers. However, recent research suggests a more nuanced relationship between heterogeneity, habitat size, and diversity than previously thought. This study looks to bridge existing research gaps by examining the ecologically and conservational important habitat of wetlands. Specifically, the study focuses on the plant diversity …

Antimicrobials Produced By Ants: Chemical Properties And Microbe Specificity, Katy Chon

Master's Theses

Antibiotic resistance is a growing public health concern worldwide, and for over a decade, we have been witnessing the growth of difficult to treat infectious diseases caused by bacteria that are becoming resistant to antibiotics. This resistance can be mostly related to the misusing and improper use of antibiotics in both humans and animals. To restore this problem, humans have turned to new sources for the production of antibiotics. In this study, we focused on using ants. Social insects, including ants and bees, have faced strong disease pressures during their evolution and have developed a range of methods to fight …

Microplastic Accumulation In The Marsh Periwinkle (Littoraria Irrorata), Sarah Keaton, Hannah Lukhard, Eli Windy, Manar Hasan

DePaul Discoveries

Contamination of oceans by microplastics (mm) currently poses a major threat to aquatic and terrestrial ecosystems worldwide. Recent attention towards this issue has raised questions about the extent to which microplastics have accumulated in the environment, and has led to an increase in studies on the effects of microplastics in various organisms. However, levels of contamination in protected natural areas are still largely unexplored, yet can offer an important empirical perspective on the issue. In addition, little is known about the potential effects of microplastics on behavior in the field. This research was conducted within the protected ACE Basin National …

A Multispecies Hierarchical Model To Integrate Count And Distance-Sampling Data, Neil A. Gilbert, Caroline M. Blommel, Matthew T. Farr, David S. Green, Kay E. Holekamp, Elise F. Zipkin

Institute for Natural Resources Publications

Integrated community models—an emerging framework in which multiple data sources for multiple species are analyzed simultaneously—offer opportunities to expand inferences beyond the single-species and single-data-source approaches common in ecology. We developed a novel integrated community model that combines distance sampling and single-visit count data; within the model, information is shared among data sources (via a joint likelihood) and species (via a random-effects structure) to estimate abundance patterns across a community. Parameters relating to abundance are shared between data sources, and the model can specify either shared or separate observation processes for each data source. Simulations demonstrated that the model provided …

From Pixels To Plants: Remote Sensing Of California Invasive Plants, Kenneth Rangel

Master's Projects and Capstones

Invasive plants cause significant impacts to ecosystems, the economy, and human health. California has experienced significant plant invasions and is well suited to future invasion because of its Mediterranean climate and human disturbance. Eradication or control of invasive plant species requires a detailed understanding of their spatial distribution, which typically involves on the ground surveys that can be expensive or inconsistent. Remote sensing offers a potential alternative or supplement to in-person invasive plant mapping. This study performed a comparative analysis of 41 remote sensing studies that mapped the distribution of California invasive plants. I found that while high spectral resolution …

Mathematically Modeling Stoichiometric Drivers Of Nitrogen Fixation, Rebecca Everett, Corday Selden, Mohamed Hatha Abdulla, Jabir Thajudeen, James Powell, Edwin Cruz-Rivera, Luca Schenone, Renn Schipper, Megan Berberich, Halvor Halvorson, Robinson Fulweiler, Amy Marcarelli, Thad Scott

Biology and Medicine Through Mathematics Conference

No abstract provided.