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2016

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Articles 391 - 420 of 1105

Full-Text Articles in Ecology and Evolutionary Biology

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan May 2016

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan

Departmental Papers (Biology)

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, areincreasingly threatened. There is a need to accelerate collection efforts in these regionsbefore threatened or endangered species become extinct. The diverse geographical, ecological,genetic, morphological, and behavioral data generated from the on-site collection ofan individual specimen are useful for many scientific purposes. However, traditional methodsfor specimen preparation in the field do not permit researchers to retrieve neuroanatomicaldata, disregarding potentially useful data for increasing our understanding of braindiversity. These data have helped clarify brain evolution, deciphered relationships betweenstructure and function, and revealed constraints and selective pressures that provide contextabout the evolution …

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Producing Knowledge: The Social Made Visible In The Division Of Environmental Biology Of The National Science Foundation, Patrick Southern May 2016

Producing Knowledge: The Social Made Visible In The Division Of Environmental Biology Of The National Science Foundation, Patrick Southern

Capstone Collection

This inquiry explores how knowledge is produced in the Division of Environmental Biology (DEB) of the National Science Foundation. Beginning from a poststructuralist understanding of science as firmly embedded in the unequal relations of society, this study sought to examine how the policies and procedures of funding research proposals in DEB influence and are influenced by those relations. Using an institutional ethnography approach to analysis, data were collected from analyzing publicly available texts from the division, NSF, Congress, the Office of Management and Budget, and the research community. The analysis demonstrates how the activities of DEB could maintain or exacerbate …

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Ménage À Trois In The Atlantic Brief Squid (Lolliguncula Brevis): Prior Presence Affects Mate Choice, Rachel A. Schlessinger May 2016

Ménage À Trois In The Atlantic Brief Squid (Lolliguncula Brevis): Prior Presence Affects Mate Choice, Rachel A. Schlessinger

Theses and Dissertations

Lolliguncula brevis given prior presence experienced a significantly greater number of contacts with opposite sex squid than rivals. Males given prior presence also spent significantly more time in proximity to females than rivals. This suggests that for both female and male Atlantic brief squid, having prior presence influences mating behavior.

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A Case Study: Observations Of Behaviors & Vocalizations In A Captive Asian Elephant (Elephas Maximus) During Quarantine, Alexandra L. Dilley May 2016

A Case Study: Observations Of Behaviors & Vocalizations In A Captive Asian Elephant (Elephas Maximus) During Quarantine, Alexandra L. Dilley

Theses and Dissertations

Bozie, an Asian elephant (Elephas maximus), was relocated from the Baton Rouge Zoo to Smithsonian’s National Zoo. During a requisite 29-day quarantine period, I recorded Bozie’s stress-related behaviors and the vocalizations she produced when she was alone and with her keepers in free and protected contact.

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Investigating The Nest Sanitation Hypothesis In A Rejecter Species: Is Sanitation A Proximate Link, Pre-Adaptation, Or By-Product Of Egg Ejection?, Alec B. Luro May 2016

Investigating The Nest Sanitation Hypothesis In A Rejecter Species: Is Sanitation A Proximate Link, Pre-Adaptation, Or By-Product Of Egg Ejection?, Alec B. Luro

Theses and Dissertations

Nest sanitation, a behavior similar in motor pattern to egg ejection, has been proposed repeatedly as a potential pre-adaptation to foreign egg ejection in avian brood parasites hosts. We found no support for the sanitation hypothesis--therefore we suggest egg ejection may have evolved independently of sanitation.

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Hands Of The Future, Inc; Junior Nature Club; Living Schoolyards, Zonda K. Bryant May 2016

Hands Of The Future, Inc; Junior Nature Club; Living Schoolyards, Zonda K. Bryant

Purdue P-12 Networking Summit & Poster Session

Programs to connect children to nature

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Life In The Underworld: Anchialine Cave Biology In The Era Of Speleogenomics, Jorge L. Pérez-Moreno, Thomas M. Iliffe, Heather D. Bracken-Grissom May 2016

Life In The Underworld: Anchialine Cave Biology In The Era Of Speleogenomics, Jorge L. Pérez-Moreno, Thomas M. Iliffe, Heather D. Bracken-Grissom

International Journal of Speleology

Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing …

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A Multiple‐Scale Assessment Of Long‐Term Aspen Persistence And Elevational Range Shifts In The Colorado Front Range, Mario Bretfeld, Scott B. Franklin, Robert K. Peet May 2016

A Multiple‐Scale Assessment Of Long‐Term Aspen Persistence And Elevational Range Shifts In The Colorado Front Range, Mario Bretfeld, Scott B. Franklin, Robert K. Peet

Aspen Bibliography

Aspen forests and woodlands are some of the most species‐rich forest communities in the northern hemisphere. Changing climate, altered disturbance regimes, land use, and increased herbivore pressure threaten these forests both in Eurasia and North America. In addition, rapid mortality dubbed “Sudden Aspen Decline” is a concern for aspen's long‐term presence in the western United States, especially Colorado and Utah. Yet it is still unclear whether aspen is persistent or declining at the landscape scale. We assessed aspen persistence at different spatial scales in the Colorado Front Range by resampling 89 plots containing aspen from among 305 vegetation plots sampled …

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Resilient Rivers Hpr 132g, Joanna Burkhardt May 2016

Resilient Rivers Hpr 132g, Joanna Burkhardt

Library Impact Statements

No abstract provided.

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Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro May 2016

Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro

Undergraduate Honors Theses

Armored scale insects (Hemiptera: Diaspididae) are some of the most invasive insects in the world. These cryptic plant parasites are most often encountered in managed agricultural ecosystems, but very little is known about their distribution, abundance, and diversity in tropical rainforest canopies, where they are likely to have their highest diversity. Because these ubiquitous insects are extreme generalists with undirected dispersal, their diversity (alpha and beta) accumulation can conceivably be modeled according to tenets derived from island biogeography theory. For example, one expectation is that older established trees should boast a higher species diversity and abundance than younger ones. Other …

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Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2015, Matthew A. Wood May 2016

Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2015, Matthew A. Wood

PREP Reports & Publications

Nitrogen, phosphorus, and sediment loads to the Great Bay Estuary are a constant concern. The Piscataqua Region Estuaries Partnership (PREP) calculates the nitrogen load from tributaries to the Great Bay Estuary for its State of Our Estuaries reports. Therefore, the purpose of this study was to collect representative data on nitrogen, phosphorus, and suspended sediment concentrations in tributaries to the Great Bay Estuary in 2015. The study design followed the tributary sampling design which was implemented by the New Hampshire Department of Environmental Services between 2001 and 2007 and sustained by the University of New Hampshire from 2008 to the …

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Revelation Of Yin-Yang Balance In Microbial Cell Factories By Data Mining, Flux Modeling, And Metabolic Engineering, Gang Wu May 2016

Revelation Of Yin-Yang Balance In Microbial Cell Factories By Data Mining, Flux Modeling, And Metabolic Engineering, Gang Wu

McKelvey School of Engineering Graduate Student Theses & Dissertations

The long-held assumption of never-ending rapid growth in biotechnology and especially in synthetic biology has been recently questioned, due to lack of substantial return of investment. One of the main reasons for failures in synthetic biology and metabolic engineering is the metabolic burdens that result in resource losses. Metabolic burden is defined as the portion of a host cells resources either energy molecules (e.g., NADH, NADPH and ATP) or carbon building blocks (e.g., amino acids) that is used to maintain the engineered components (e.g., pathways). As a result, the effectiveness of synthetic biology tools heavily dependents on cell capability to …

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Trox Paulseni (Coleoptera: Trogidae), A New Species From Nebraska And Kansas, Usa, Brett C. Ratcliffe May 2016

Trox Paulseni (Coleoptera: Trogidae), A New Species From Nebraska And Kansas, Usa, Brett C. Ratcliffe

Insecta Mundi

Trox paulseni Ratcliffe, new species (Coleoptera: Trogidae), is described from Nebraska and Kansas, USA. A description, diagnosis to separate it from Trox hamatus Robinson (its closest congener), distribution, and illustrations are provided.

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An Alternate Trawling Method: Reduced Bycatch And Benthic Disturbance Achieved With The Wing Trawling System, Geoffrey Udoff May 2016

An Alternate Trawling Method: Reduced Bycatch And Benthic Disturbance Achieved With The Wing Trawling System, Geoffrey Udoff

LSU New Orleans Theses and Dissertations

The Wing Trawling System (WTS) was tested as an alternative to traditional shrimp capture methods in the Gulf. Compared to an otter trawl, this trawl was conceived to reduce bycatch, retain shrimp catch, and minimize seafloor disturbance. Through seventy-one paired tows, the WTS was assessed against a standard otter trawl. The WTS was found to reduce bycatch by 63-65% and reduce shrimp catch by 30-35%. Additionally, I measured the depth of the scars produced by both trawls and quantified the turbidity of the plumes behind them. The scars left by the WTS and the otter trawl were between 9.9 …

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Determining The Pollination Mechanism Of A Problematic Invasive Species In The Gulf South: Triadica Sebifera, Jennifer Wester Clark May 2016

Determining The Pollination Mechanism Of A Problematic Invasive Species In The Gulf South: Triadica Sebifera, Jennifer Wester Clark

LSU New Orleans Theses and Dissertations

Understanding the ecology of invasive species is vital to curb the homogenizing of ecosystems, yet the pollination mechanisms of the Chinese tallow tree (Triadica sebifera) in its introduced habitat remain ambiguous. This study examines self-pollination, wind pollination, and flower-visiting insects of tallow in a bottomland hardwood forest and Longleaf pine savannah in the U.S. Gulf South. These data suggest that self-pollination and airborne pollination are possible, but likely rare occurrences, although the possibility of apoxisis was not investigated. Seed production in exclusion experiments was significantly less than in open-pollinated flowers, and wind dispersal of tallow pollen dropped to …

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The Origin And Expansion Of The Eastern Red Fox, Adrienne Egge Kasprowicz May 2016

The Origin And Expansion Of The Eastern Red Fox, Adrienne Egge Kasprowicz

LSU New Orleans Theses and Dissertations

When new populations are first identified in a region there are multiple potential sources: introduction of a non-native species, extra-range expansion of a nearby population, or demographic growth of a previously unnoticed species. Red foxes were absent or rare in the mid-eastern portion United States until the late 1800s. Their origins potentially include natural population increase/expansion, translocations from Europe, and, eventually, 20th century fur farming. In this study I attempt to identify the relative impact of native expansion versus human mediated introductions of both colonial era European foxes and early 20th century fur-farm foxes on the establishment of red …

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The Gowanus Canal: Delving Into The Murky And Mysterious Waters Of Brooklyn’S Toxic Canal, Victoria L. Von Ancken May 2016

The Gowanus Canal: Delving Into The Murky And Mysterious Waters Of Brooklyn’S Toxic Canal, Victoria L. Von Ancken

Student Theses 2015-Present

Like many environmental issues we face today, the Gowanus Canal began as a hopeful tale. It was envisioned as a promising cargo transportation waterway in Brooklyn, New York. However, due to reckless planning with little thought for the future, the canal slowly began to have a negative effect on its surrounding landscape and community, as well as abandoning its initial purpose, and ultimately sitting stagnant in the neighborhood. Today, the canal is a large environmental problem we face and is in great need of cleanup. The canal is a prime example of a lack of planning and consequential detrimental effects …

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Filter Feeding, Sam Boven May 2016

Filter Feeding, Sam Boven

Graduate School of Art Theses

This paper is an investigation of the mechanics of evolutionary processes and its methods. These investigations are representative of both a world view and a methodology of artistic production. I consider a central consideration of my current work to be the interaction of distinct components and the new experience that these interactions produce when pondered by a viewer. Evolution and the development of life is driven ever forward by the interactions between organisms, both as groups and individuals. By grouping these relationships into three categories: parasitism, predation, and symbiosis, I aim to provide a lens through which to consider both …

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Ocean Acidification And Predator-Prey Relations: Correlating Disruption Of Predator Avoidance With Chemosensory Deficits, Alexandra Fw Sidun, William G. Wright May 2016

Ocean Acidification And Predator-Prey Relations: Correlating Disruption Of Predator Avoidance With Chemosensory Deficits, Alexandra Fw Sidun, William G. Wright

Student Scholar Symposium Abstracts and Posters

One of the most destructive effects of global climate change is the increased carbon sequestering and consequential acidification of our world’s oceans. The impacts of ocean acidification on marine organisms are still relatively unknown, especially effects on behavioral ecology. Avoiding predation has emerged from recent behavioral ecology literature as a critical feature in the life history of a wide array of animal species; experiments on marine fishes suggest acidic water compromises their predator-avoidance abilities. Recent assays in our lab suggest predator-induced behavior is reduced by weakly acidic water. These experiments do not address the potential factor of generalized malaise caused …

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Connecting The Physiological And Behavioral Response To Heat Stress On A Warming Planet, Anastasia Kalyta May 2016

Connecting The Physiological And Behavioral Response To Heat Stress On A Warming Planet, Anastasia Kalyta

Student Scholar Symposium Abstracts and Posters

Intertidal communities are considered good models of the biological effects of climate change on ecosystems, as their resident organisms are subjected to heat spells during daytime low tides. The increasing heat exposure can elicit behavioral as well as physiological responses in intertidal organisms. We studied the relationship between these responses to heat stress in the blue-banded hermit crab, Pagurus samuelis, by inducing a “heat shock” with elevated water temperature of 29 °C for 2.5 h. The behavioral effect of heat-shock was quantified using a 30-minute feeding assay, measuring the mass of a standard squid pellet consumed by individual hermit crabs. …

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Discrete But Variable Structure Of Animal Societies Leads To The False Perception Of A Social Continuum, Dustin R. Rubenstein, Carlos A. Botero, Eileen A. Lacey May 2016

Discrete But Variable Structure Of Animal Societies Leads To The False Perception Of A Social Continuum, Dustin R. Rubenstein, Carlos A. Botero, Eileen A. Lacey

Biology Faculty Research

Animal societies are typically divided into those in which reproduction within a group is monopolized by a single female versus those in which it is shared among multiple females. It remains controversial, however, whether these two forms of social structure represent distinct evolutionary outcomes or endpoints along a continuum of reproductive options. To address this issue and to determine whether vertebrates and insects exhibit the same patterns of variation in social structure, we examined the demographic and reproductive structures of 293 species of wasps, ants, birds and mammals. Using phylogenetically informed comparative analyses, we found strong evidence indicating that not …

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Population Projection And Habitat Preference Modeling Of The Endangered James Spinymussel (Pleurobema Collina), Marisa Draper May 2016

Population Projection And Habitat Preference Modeling Of The Endangered James Spinymussel (Pleurobema Collina), Marisa Draper

Senior Honors Projects, 2010-2019

The James Spinymussel (Pleurobema collina) is an endangered mussel species at the top of Virginia’s conservation list. The James Spinymussel plays a critical role in the environment by filtering and cleaning stream water while providing shelter and food for macroinvertebrates; however, conservation efforts are complicated by the mussels’ burrowing behavior, camouflage, and complex life cycle. The goals of the research conducted were to estimate detection probabilities that could be used to predict species presence and facilitate field work, and to track individually marked mussels to test for habitat preferences. Using existing literature and mark-recapture field data, these goals were accomplished …

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Escape Strategy Of The Cockroach (Gromphadorhina Portentosa) To Heat And Looming Stimuli, Jiangda Ou May 2016

Escape Strategy Of The Cockroach (Gromphadorhina Portentosa) To Heat And Looming Stimuli, Jiangda Ou

Senior Honors Projects, 2010-2019

Escape responses to aversive stimuli have been observed in insects, including species of cricket, fly, locust, and cockroach. The goal of this study was to investigate the escape strategy of the Madagascar cockroach, Gromphadorhina portentosa. In regard to this species, Erickson and colleagues (2015) showed that electrical stimulation of both cerci and antennae together could generate an escape response. However, in other reports (Olsen and Triblehorn, 2014), it was observed that wind could not elicit the escape response. In this study, G. portentosa was stimulated by looming and heat stimuli. A 2.5’’ black ball approaching at 1 m/s was used …

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Beyond The Urban Stream Syndrome: Organic Matter Budget For Diagnostics And Restoration Of An Impaired Urban River, Dave M. Epstein, Julia E. Kelso, Michelle A. Baker May 2016

Beyond The Urban Stream Syndrome: Organic Matter Budget For Diagnostics And Restoration Of An Impaired Urban River, Dave M. Epstein, Julia E. Kelso, Michelle A. Baker

Biology Faculty Publications

In response to water quality standard violations linked to excessive organic matter (OM) and a lack of sampling data informing the Total Maximum Daily Load (TMDL), an organic matter budget was created to quantify and identify sources of OM in the lower Jordan River (Salt Lake City, UT). By sampling dissolved, fine and coarse particulate OM, as well as measuring ecosystem metabolism at seven different sites, the researchers aimed to identify the origin of excess OM, and understand pathways by which different size classes of the OM pool are generated. The dissolved fraction (DOM; 94 %) was found to be …

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Temperature Variability And Multiple Environmental Stressors: How Will Tadpole Performance Change With Our Climate?, Diana C. Macklem, Tracy A. G. Rittenhouse, Ashley M. Helton, Jason H. O'Connor, Jaron T. Kolek May 2016

Temperature Variability And Multiple Environmental Stressors: How Will Tadpole Performance Change With Our Climate?, Diana C. Macklem, Tracy A. G. Rittenhouse, Ashley M. Helton, Jason H. O'Connor, Jaron T. Kolek

University Scholar Projects

This project seeks to analyze how predicted changes in climate and its interactions with other environmental factors will influence tadpole growth and development. Our first study examined how the frequency and magnitude of temperature variability affect wood frog and gray tree frog tadpole performance. We found that performance responses to repeatedly fluctuating treatments did not differ significantly from constant temperatures held at the same mean for wood frog tadpoles. However, elevated mean temperatures of 26 degrees Celsius caused tadpoles to metamorphose early, suggesting a potential developmental threshold. We found that gray tree frog performance was affected by fluctuating temperature treatments, …

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The Effect Of Soil Ph On The Integument Of Western Tiger Salamanders, Aaron Devine, Dennis M. Ferraro May 2016

The Effect Of Soil Ph On The Integument Of Western Tiger Salamanders, Aaron Devine, Dennis M. Ferraro

UCARE: Research Products

This study was done in an effort to better understand the multifaceted issues in amphibian decline, specifically within the eastern regions of Nebraska, to determine whether or not human-induced acid rain contributed to the decline. This is a heavily important topic of research as amphibians worldwide are declining related to many issues that stem from climate change and several other environmental issues of that nature. This study looked to use acidic pH within soil from western Nebraska to determine the reactionary impacts (primarily lesions) the western tiger salamander had after being subjected to it. It was found that pH did …

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Next-Generation Sequencing Of A Multi-Drug Resistance Plasmid Captured From Stream Sediment, Kevin G. Libuit May 2016

Next-Generation Sequencing Of A Multi-Drug Resistance Plasmid Captured From Stream Sediment, Kevin G. Libuit

Masters Theses, 2010-2019

Plasmids in agriculturally-impacted bodies of water may play a significant role in the dissemination of antibiotic resistance. Previously, Erika Gehr, as part of her M.S. thesis work in our laboratory, captured environmental plasmids without cultivation of host bacteria from stream sediment into Escherichia coli. Individual plasmids were capable of conferring resistance to a surprising array of antibiotics including aminoglycosides and extended-spectrum β-lactams. In this study, we developed a method to sequence multi-drug resistance plasmids using both Oxford Nanopore MinION and Ion Torrent Personal Genome Machine sequencers. Plasmid pEG1-1 was sequenced on both platforms and a hybrid assembly utilizing data …

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Photosynthetic Characterization Of Invasive Plant Diversity In Los Angeles County From 1830-2010, Lauren E. Pangburn, Erich Eberts, Victor Carmona-Galindo May 2016

Photosynthetic Characterization Of Invasive Plant Diversity In Los Angeles County From 1830-2010, Lauren E. Pangburn, Erich Eberts, Victor Carmona-Galindo

Honors Thesis

The increase in atmospheric CO2 levels due to climate change may greatly impact invasive plant species, which are non-native organisms that spread unchecked in space and negatively impact native organisms. The success of these invasives may be related to specific traits, such as their photosynthetic pathway. We acquired the specimen information for invasive species registered in the Consortium for California Herbaria of the University of California Berkeley to evaluate the community dynamics of 1,000 invasive species in Los Angeles County. We found that both diversity and richness of invasive plant species has increased over a period of 180 years. …

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Plastic Pollution And The Global Throwaway Culture: Environmental Injustices Of Single-Use Plastic, Kristin L. Mcdermott May 2016

Plastic Pollution And The Global Throwaway Culture: Environmental Injustices Of Single-Use Plastic, Kristin L. Mcdermott

ENV 434 Environmental Justice

The global throwaway culture has created a cross-ecosystem plastic pollution injustice. The first to suffer this injustice will be the most vulnerable. Our oceans have become our dumpsters. The throwaway culture has created a disrespect of material goods that has turned the earth’s resources into rubbish after a single use. Eighty percent of the yearly 8 million tons of plastic that enter the ocean is single use plastic, such as plastic bottles, plastic shopping bags, or cigarette lighters.[1] Plastic has destroyed ecosystems, robbing impoverished communities of natural resources and of a healthy and safe living environment. First to suffer …

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A New Species Of Dinonigidius De Lisle From Sri Lanka (Coleoptera: Lucanidae), M. J. Paulsen May 2016

A New Species Of Dinonigidius De Lisle From Sri Lanka (Coleoptera: Lucanidae), M. J. Paulsen

Insecta Mundi

Dinonigidius bartolozzii Paulsen, new species, (Coleoptera: Lucanidae) is described from Sri Lanka, and compared with the only other species of the genus, D. ahenobarbus de Lisle from India.

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