Ecology and Evolutionary Biology Commons^™

New Species Of Gondwanamyces From Dying Euphorbia Trees In South Africa, Johannes Alwyn Van Der Linde, Diana Six, Michael J. Wingfield, Jolanda Roux

Ecosystem and Conservation Sciences Faculty Publications

Gondwanamyces and its Custingophora anamorphs were first described from Protea infructescences in South Africa. Subsequently these unusual fungi were also found on Cecropia in Central America. During an investigation into the decline and death of native Euphorbia trees in South Africa, several fungal isolates resembling the anamorph state of Gondwanamyces were obtained from diseased tissues. In this study these isolates are identified based on morphology and comparisons of DNA sequences. Two previously unknown Gondwanamyces species were identified, both were associated with damage caused by beetles (Cossonus sp.). Inoculation studies showed that the new species of Gondwanamyces are pathogenic on Euphorbia …

Brooding, Provisioning, And Compensatory Care In The Cooperatively Breeding Acorn Woodpecker, Walter D. Koenig, Eric L. Walters

Biological Sciences Faculty Publications

We analyzed reproductive investment in parental care (brooding and the provisioning of nestlings) in the acorn woodpecker (Melanerpes formicivorus), a cooperatively breeding species in which both polygynandry and helping-at-the-nest are common. As predicted based on the strategies pursued by birds of different sex and status, breeders generally invested more in parental care than helpers, and breeder females invested more than breeder males. Contrary to expectations, however, the degree to which individuals reduced their effort with increasing group size (i.e., patterns of load lightening or compensatory care) did not match overall investment. Instead, as group size increased, there was …

Testing The Role Of Male-Male Competition In The Evolution Of Sexual Dimorphism: A Comparison Between Two Species Of Porcelain Crabs, J. Antonio Baeza, Cynthia M. Asorey

Biological Sciences Faculty Publications

Theory predicts marked sexual dimorphism in terms of body size and body structures used as weapons (e.g. chelipeds) in gonochoric species with intense male sexual competition for receptive females and reduced or no sexual dimorphism in species where competition among males is trivial. We tested this hypothesis using a pair of closely-related species of symbiotic porcelain crabs as a model. In one species that inhabits sea anemones solitarily, competition among males for receptive females is unimportant. In a second species that dwells as dense aggregations on sea urchins, malemale competition for sexual partners is recurrent. We expected considerable sexual dimorphism …

The Role Of Social Interactions On The Development And Honesty Of A Signal Of Status, Sanh K. Diep

Theses and Dissertations--Biology

Badges of status are supposed to have insignificant production costs, so use costs are thought to be most important in ensuring signal reliability. Use costs arise from the use of the status signal in social interactions. Social experiences that arise from the use of inappropriate signals in social interactions may drive mechanisms that result in reduced fitness for inappropriate signalers. The role of social control, probing and familiarity in producing use costs was explored. There was no evidence that social control by dominants produced a cost for cheaters and no evidence that social control by subordinates produced a cost for …

Control And Passive Treatment Of Runoff From Horse Muck Storage Structures Using Rain Gardens, Hillary K. Otte

Theses and Dissertations--Forestry and Natural Resources

Runoff from livestock operations may contain a variety of pathogens and high levels of nutrients and other harmful contaminants, and is of particular concern in central Kentucky as watersheds are threatened by waste generated from a high concentration of equine activity. Rain gardens are a type of stormwater management tool used to capture and passively treat runoff. This project aimed to incorporate rain gardens into the horse muck storage structures at a thoroughbred facility in the Canr Run watershed in Lexington, Kentucky. Water quality data from soil water within two rain garden muck pads and two control pads, and grab …

Factors Influencing Web Tenure In A Tropical Spider And Comparison Between Forest And Non-Forest Habitats, Daniella R. Barraza

Scripps Senior Theses

Webs are fundamental to the ecology of Nephila clavipes, the golden orb-weaver spider, because they serve as sites for prey capture, reproduction, competition, predation, and parasitism. In addition to the presence of the female N. clavipes, males and kleptoparasites reside on the web in varying numbers. Webs are also found in clusters with conspecific females. Web site selection and length of web tenure is a behavioral decision vital to the spider’s fitness and the ecology of her species. I conducted a field census to quantify these factors and analyze their influence on web tenure, compare web ecology between a forest …

Birth Timing For Mountain Lions (Puma Concolor); Testing The Prey Availability Hypothesis, Brian D. Jansen

Natural Resource Management Faculty Publications

We investigated potential advantages in birth timing for mountain lion (Puma concolor) cubs. We examined cub body mass, survival, and age of natal dispersal in relation to specific timing of birth. We also investigated the role of maternal age relative to timing of births. We captured mountain lion cubs while in the natal den to determine birth date, which allowed for precise estimates of the population birth pulse and age of natal dispersal. A birth pulse occurred during June–August. Body mass of cubs was related to litter size and timing of birth; heaviest cubs occurred in litters of 2, and …

Evaluation Of Carbon Fluxes And Trends (2000e2008) In The Greater Platte River Basin: A Sustainability Study For Potential Biofuel Feedstock Development, Yingxin Gu, Bruce K. Wylie, Li Zhang, Tagir G. Gilmanov

Natural Resource Management Faculty Publications

This study evaluates the carbon fluxes and trends and examines the environmental sustainability (e.g., carbon budget, source or sink) of the potential biofuel feedstock sites identified in the Greater Platte River Basin (GPRB). A 9-year (2000e2008) time series of net ecosystem production (NEP), a measure of net carbon absorption or emission by ecosystems, was used to assess the historical trends and budgets of carbon flux for grasslands in the GPRB. The spatially averaged annual NEP (ANEP) for grassland areas that are possibly suitable for biofuel expansion (productive grasslands) was 71e169 g C m2 year1 during 2000e2008, indicating a carbon sink …

Priority Effects Among Young-Of-The-Year Fish: Reduced Growth Of Bluegill Sunfish (Lepomis Macrochirus) Caused By Yellow Perch (Perca Flavescens)?, Mark A. Kaemingk, Jeffrey C. Jolley, David W. Willis, Steven R. Chipps

Natural Resource Management Faculty Publications

1. When available, Daphnia spp. are often preferred by age-0 yellow perch and bluegill sunfish because of energetic profitability. We hypothesised that predation by age-0 yellow perch could lead to a midsummer decline (MSD) of Daphnia spp. and that priority effects may favour yellow perch because they hatch before bluegill, allowing them to capitalise on Daphnia spp. prior to bluegill emergence. 2. Data were collected from 2004 to 2010 in Pelican Lake, Nebraska, U.S.A. The lake experienced a prolonged MSD in all but 1 year (2005), generally occurring within the first 2 weeks of June except in 2008 and 2010 …

Following The Trail Of Ants: An Examination Of The Work Of E.O. Wilson, Samantha Kee

Writing Across the Curriculum

No abstract provided.

Successful Genotyping Of Microsatellites In The Woolly Mammoth, Yasuko Ishida, Alfred L. Roca, Stephen Fratpietro, Alex D. Greenwood

Biological Sciences Faculty Publications

Genetic analyses using ancient DNA from Pleistocene and early Holocene fossils have largely relied on mitochondrial DNA (mtDNA) sequences. Among woolly mammoths, Mammuthus primigenius, mtDNA analyses have identified 2 distinct clades (I and II) that diverged 1-2 Ma. Here, we establish that microsatellite markers can be effective on Pleistocene samples, successfully genotyping woolly mammoth specimens at 2 loci. Although significant differentiation at the 2 microsatellite loci was not detected between 16 clade I and 4 clade II woolly mammoths, our results demonstrate that the nuclear population structure of Pleistocene species can be examined using fast-evolving nuclear microsatellite markers.

Diversity Among Macroalgae-Consuming Fishes On Coral Reefs: A Transcontinental Comparison, Adriana Verges, Scott Bennett, David R. Bellwood

Research outputs 2012

Despite high diversity and abundance of nominally herbivorous fishes on coral reefs, recent studies indicate that only a small subset of taxa are capable of removing dominant macroalgae once these become established. This limited functional redundancy highlights the potential vulnerability of coral reefs to disturbance and stresses the need to assess the functional role of individual species of herbivores. However, our knowledge of species-specific patterns in macroalgal consumption is limited geographically, and there is a need to determine the extent to which patterns observed in specific reefs can be generalised at larger spatial scales. In this study, video cameras were …

Chimpanzee (Pan Troglodytes) Responses To Visitors Using Chimpanzee-Friendly Behaviors, Daniella Bismanovsky

All Master's Theses

Many studies suggest that zoo visitors are a cause of stress among animals; among primates, visitor presence can lead to an increase in aggressive displays, time spent non-visible to the public, and a decrease in overall activity. This study tested the effectiveness of using species-specific behaviors among a group of captive chimpanzees. There were 2 conditions: a control, and an experimental condition in which visitors were asked to adopt a stooped posture or lean on the railing, and show a chimpanzee play face. The visitors stooped their posture, sat, and leaned on the railing significantly more in the experimental condition …

Consequences Of Kleptoplasty On The Distribution, Ecology, And Behavior Of The Sacoglossan Sea Slug, Elysia Clarki, Michael Louis Middlebrooks

USF Tampa Graduate Theses and Dissertations

The sacoglossan sea slug Elysia clarki is able to photosynthesize for three to four months using chloroplasts sequestered from its algal food sources. Furthermore, the slug is able to store multiple chloroplasts from different algal species within the same cell. This research, consisting of several related studies, explores the role that provision of organic nutrients via photosynthesis plays in the biology of the slug. The first chapter demonstrates that, under conditions of starvation, photosynthetic activity in E. clarki remains fully functional for one month after which it then declines. During the first month of starvation the slug exhibits similar feeding …

Ontogeny And Littoral Structure Of Lakes Created On Phosphate Mined Lands Of Central Florida, Chrysoula Mitraki

USF Tampa Graduate Theses and Dissertations

Created lakes are an end product of phosphate mining in Florida. Beginning in 1975, Florida reclamation rules set criteria for phosphate created lakes aiming to approximate the structure of natural lakes, and emphasizing extensive littoral zones with both emergent and submersed vegetation.

Lake development relative to lake age and design were examined for 22 phosphate lakes representing a 40-year age trajectory, utilizing water quality and benthic invertebrate communities from littoral and deep-water locations (Chapter 1). The relative importance of morphometry and lake age in the development of littoral plant communities was examined using multiple vegetation surveys throughout the year, in …

Modification Of Trophic Links Between An Omnivore And Macroinfaunal Prey From Sandy Beaches Of Differing Physical Regimes, Kristina Joan Morrow

USF Tampa Graduate Theses and Dissertations

Sandy beach ecosystems have been studied worldwide; however, ecological data are sparse for the extensive barrier islands of Florida. Accordingly, I investigated the feeding patterns of the ghost crab (Ocypode quadrata), a dominant omnivore inhabiting beaches along the Floridian coast. Density data was collected for ghost crabs and swash macroinfaunal prey. In addition, I utilized stable isotopes in conjunction with the mixing models IsoSource and SIAR to characterize diets of ghost crabs across three barrier islands in spring and summer 2011. Results showed that ghost crabs at Cayo Costa feed primarily on swash macroinfauna, while those from Anclote Key shifted …

Use Of Adventitious Roots For The Determination Of Hydroperiod In Isolated Wetlands, Michael Joseph Reyes

USF Tampa Graduate Theses and Dissertations

Abstract

Accurate measurement of the hydroperiod in isolated wetlands currently relies upon the installation and frequent monitoring of devices such as piezometers and staff gauges. Observations of biological indicators of the hydroperiod may be able to supplement data collected from these devices and could potentially replace them as a means of accurately determining this hydrologic interval. The study objective was to determine whether adventitious root formation and maturation on buttonbush (Cephalanthus occidentalis) could be used as a viable indicator of the hydroperiod in isolated wetlands. Buttonbush seedlings were flooded in a controlled environment over a three month period in the …

Variability In Hydrology And Ecosystem Properties And Their Role In Regulating Soil Organic Matter Stability In Wetlands Of West-Central Florida, Sharon Jean Feit

USF Tampa Graduate Theses and Dissertations

Soil organic matter (SOM) provides many ecosystem services that are necessary for continued ecosystem function. The accumulation of SOM in an ecosystem is a function of its persistence time which can range from days to thousands of years. Ecosystem properties including dominant vegetation type, soil texture, and soil moisture in various habitats can regulate the persistence time of SOM.

Wetlands, because of their associated ecosystem properties, promote SOM accumulation, but little has been done to determine the ecosystem properties that regulate its persistence over time. In west-central Florida, urbanization and increased water demands have suppressed water tables in isolated wetland …

Assessment Of Diver Impact During The Spiny Lobster Sport Season, Florida Keys, Usa, Mark Lewis Hartman

USF Tampa Graduate Theses and Dissertations

The Spiny Lobster (Panulirus argus) fishery in Florida is closed during the spawning season (March-July) except for a two-day recreational `miniseason' for sport divers in July, several days prior to the opening of the commercial fishing season. In Monroe County, recreational fishers, who possess a valid Saltwater Fishing License with crawfish stamp, are allowed to harvest six lobsters per day, each with a minimum carapace length of 76.2 mm (3.0 inches). During these two days, approximately 50,000 people attempt to catch lobster, and the number of boats visiting the reef has been estimated to be up to 900 times higher …

No Honor Among Snails: Conspecific Competition Leads To Incomplete Drill Holes In The Naticid Gastropod Neverita Delessertiana (R Cluz), Jack A. Hutchings

USF Tampa Graduate Theses and Dissertations

The fossil record of drilling predation has been widely used to study predator-prey interactions and their relative importance on long-term evolutionary processes. Incomplete drill holes have been interpreted as indicators of failed attacks due to well-defended prey. However, this interpretation is based on pair-wise interactions between one predator and one prey, a condition commonly compromised in nature. The hypothesis that interference among drilling predators leads to an increase in the relative frequency of incomplete drill holes was tested in the laboratory using the naticid Neverita delessertiana (R cluz) and a common prey, the bivalve Chione elevata (Say). The experiment consisted …

Dolphin Sound Production And Distribution On The West Florida Shelf, Peter Simard

USF Tampa Graduate Theses and Dissertations

This dissertation is an investigation of dolphin sound production and distribution off west central Florida. Although a wealth of information exists on the production of common sounds (whistles, echolocation) made by captive, trained dolphins, far less is known about free-ranging dolphin sound production and of unusual sounds. In addition, while inshore dolphin populations or communities are the subjects of research projects in many locations, dolphins in offshore waters are less commonly studied. The objectives of this dissertation were to contribute information on free-ranging dolphin sounds and continental shelf dolphin distribution.

While echolocation has been rigorously studied in captive, trained dolphins, …

Post-Occupancy Evaluation At The Zoo: Behavioral And Hormonal Indicators Of Welfare In Orangutans (Pongo Pygmaeus Abelii), Leigha Tingey

Dissertations and Theses

An increased understanding of species-specific behavioral needs has lead zoos to focus on providing more naturalistic and stimulating environments. Scientific assessments of how changes in habitat affect animal behavior are necessary in improving overall animal welfare. This study examined the move of three orangutans housed at the Oregon Zoo into a new and innovative exhibit. Post-occupancy evaluation (POE), which offers systematic information regarding the success or failure of the built environment (Maple & Finlay, 1987), was utilized to effectively evaluate the results of the move. The collection of behavioral data and adrenal activity monitoring through collection of non-invasive saliva, urine …

Greenhouse Gas Fluxes In Southeastern U.S. Coastal Plain Wetlands Under Contrasting Land Uses, Jennifer L. Morse, Marcelo Ardón, Emily S. Bernhardt

Environmental Science and Management Faculty Publications and Presentations

Whether through sea level rise or wetland restoration, agricultural soils in coastal areas will be inundated at increasing rates, renewing connections to sensitive surface waters and raising critical questions about environmental trade-offs. Wetland restoration is often implemented in agricultural catchments to improve water quality through nutrient removal. Yet flooding of soils can also increase production of the greenhouse gases nitrous oxide and methane, representing a potential environmental trade-off. Our study aimed to quantify and compare greenhouse gas emissions from unmanaged and restored forested wetlands, as well as actively managed agricultural fields within the North Carolina coastal plain, USA. In sampling …

Predator-Prey: Interactions Between The Spiny Waterflea (Bythotrephes Longimanus) And Pumpkinseed Sunfish (Lepomis Gibbosus), Jaime F. Leduc

Dissertations, Master's Theses and Master's Reports - Open

Small pumpkinseed sunfish ( Lepomis gibbosus), were found to be capable of removing the spine of Bythotrephes longimanus, an invasive cladoceran. Because fish consumption may be important in the dispersal or control of Bythotrephes, aquarium feeding experiments were conducted to 1) establish if the spine removal behavior of the pumpkinseeds was locally unique; 2) quantify how frequently pumpkinseeds exhibit the behavior; 3) determine if pumpkinseed handle Bythotrephes more quickly than other species of fish; and 4) verify if Bythotrephes' resting eggs pass through the digestive systems of pumpkinseeds in viable condition. The experiments revealed that pumpkinseeds (45-70 mm TL) from …

Effects Of Chemical Deicers On Amphibian Communites, Meagan Leigh Harless

Dissertations, Master's Theses and Master's Reports - Open

Roads and highways present a unique challenge to wildlife as they exhibit substantial impacts on the surrounding ecosystem through the interruption of a number of ecological processes. With new roads added to the national highway system every year, an understanding of these impacts is required for effective mitigation of potential environmental impacts. A major contributor to these negative effects is the deposition of chemicals used in winter deicing activities to nearby surface waters. These chemicals often vary in composition and may affect freshwater species differently. The negative impacts of widespread deposition of sodium chloride (NaCl) have prompted a search for …

On The Global Stability Of A Generalized Cholera Epidemiological Model, Yuanji Cheng, Jin Wang, Xiuxiang Yang

Mathematics & Statistics Faculty Publications

In this paper, we conduct a careful global stability analysis for a generalized cholera epidemiological model originally proposed in [J. Wang and S. Liao, A generalized cholera model and epidemic/endemic analysis, J. Biol. Dyn. 6 (2012), pp. 568-589]. Cholera is a water-and food-borne infectious disease whose dynamics are complicated by the multiple interactions between the human host, the pathogen, and the environment. Using the geometric approach, we rigorously prove the endemic global stability for the cholera model in three-dimensional (when the pathogen component is a scalar) and four-dimensional (when the pathogen component is a vector) systems. This work unifies the …

Placing Birds On A Dynamic Evolutionary Map: Using Digital Tools To Update The Evolutionary Metaphor Of The "Tree Of Life", Sonia Stephens

Electronic Theses and Dissertations

This dissertation describes and presents a new type of interactive visualization for communicating about evolutionary biology, the dynamic evolutionary map. This web-based tool utilizes a novel map-based metaphor to visualize evolution, rather than the traditional "tree of life." The dissertation begins with an analysis of the conceptual affordances of the traditional tree of life as the dominant metaphor for evolution. Next, theories from digital media, visualization, and cognitive science research are synthesized to support the assertion that digital media tools can extend the types of visual metaphors we use in science communication in order to overcome conceptual limitations of traditional …

Phylogenetic Utility Of Mitochondrial And Nuclear Genes: A Case Study In The Diptera (True Flies), Jason Caravas

Wayne State University Dissertations

The value of mitochondrial versus nuclear gene sequence data in phylogenetic analysis has received much attention without yielding definitive conclusions. Theoretical arguments and empirical data suggest a lower phylogenetic utility than equivalent nuclear gene sequences, but there are also many examples of important progress made using mitochondrial sequences. We therefore undertook a systematic performance analysis of mitochondrial and nuclear sequence partitions taken from a representative sample of dipteran species. For phylogenetic tree reconstruction, mitochondrial genes performed generally inferior to nuclear genes. However, the mitochondrial genes resolved branches for which nuclear genes failed. Moreover, the combined use of mitochondrial and nuclear …

Evaluation Of Elevated Bait Trays For Attracting Blackbirds (Icteridae) In Central North Dakota, George M. Linz, Jamison B. Winter, William J. Bleier

United States Department of Agriculture Wildlife Services: Staff Publications

Sunflower (Helianthus annuus L.) became an economically important crop in North Dakota in the 1970s, providing a major source of food for post-breeding blackbirds (Icteridae). Reducing local blackbird populations with rice grains treated with an avicide is one proposed alternative for reducing sunflower damage. In fall 2007 and 2008, we evaluated the idea of attracting blackbirds to rice-baited trays attached to wire cages supplied with live blackbirds. During our observations (1011 h), we saw 3888 birds, consisting of 25 species and 12 families, on the bait trays. Blackbirds made up 90.4% of the bird observations, whereas sparrows (Emberizidae) made …

Effects Of Hydrologic Connection On Physicochemical Conditions And Algal Properties In Backwaters Of The Lower Mississippi River, Orathai Pongruktham

Electronic Theses and Dissertations

In the last 50-100 years, the Mississippi River has been extensively engineered for flood control and navigation purposes. These modifications have substantially decreased the frequency of flooding and degree of contact of the river with its historical floodplain. However, in many areas within the current levee system there remain numerous secondary channels and other backwater sites with which the river is hydrologically connected on a seasonal basis. In this study, the relationships of surface hydrologic connection with the main channel of the Lower Mississippi River to limnological properties and development of phytoplankton biomass in three backwater sites having different patterns …