Ecology and Evolutionary Biology Commons^™

A Morphological And Genetic Analysis Of Forensically Important Blow Flies, From Georgia: The Genus Lucilia, Katie S. Googe

Honors College Theses

Identification of Blow flies (Diptera: Calliphoridae) to species is important for estimating postmortem intervals, because insect species develop at different rates. Three Blow fly species in Georgia; Lucilia coeruleiviridis, L. cuprina, and L. sericata are similar morphologically, making identification difficult. Furthermore, the status of L. cuprina is in doubt; this species may be a complex of true L. cuprina, and L. cuprina x L. sericata hybrids. The objective of this study was to survey the Georgia Blow fly community and validate the statuses of L. coeruleiviridis, L. cuprina, and L. sericata, through morphological and …

Northern Saw-Whet Owls: A Descriptive Look At Their Anatomy, Behavior, And Migration, Brandon M. Ray

Senior Honors Theses

The Northern Saw-whet Owl (Aegolius acadicus) is a small species of migratory owl native to North America. Through an analysis of research conducted at Liberty University’s Camp Hydaway in the Piedmont of Virginia as well as comparison studies at owl netting stations in the mountains and the coastal plain, it was shown that the Northern Saw-whet migrates along consistent routes southward while the timing and frequency of the migration varies by several days based on sex, age, owl population fluctuations, weather, and the owls’ physical health. Several years’ worth of owl capture data were compiled from stations across …

Microglia Respond To Both Permanent And Temporary Deaferentation In The Adult Zebrafish Olfactory Bulb, Amanda K. Mckenna

Masters Theses

The major goal of this study was to investigate a microglial response following deafferentation in the adult zebrafish, Danio rerio, olfactory bulb. Microglia were identified in the olfactory bulb using the 4c4 antibody and phagocytic-dependent labeling (DiA). Microglia responded to both methods of deafferentation namely, permanent (cautery) and temporary (Triton X- 100). On one and three days following both permanent and temporary deafferentation there was a significant increase in microglia in the treated olfactory bulb. At five and seven days after permanent and temporary deafferentation there was no longer a significant difference between the treated and untreated olfactory bulbs, …

Costs Of Female Mating Behavior In The Variable Field Cricket, Gryllus Lineaticeps, Cassandra M. Martin

School of Biological Sciences: Dissertations, Theses, and Student Research

Female animals may risk predation by associating with males that have conspicuous mate attraction traits. The mate attraction song of male field crickets also attracts lethal parasitoid flies. Female crickets, which do not sing, may risk parasitism when associating with singing males. If parasitism risk is sufficiently high, it may affect the evolution of female mating behaviors. In this dissertation, I explore the interaction between the female variable field cricket, Gryllus lineaticeps, and the parasitoid fly, Ormia ochracea. To begin, I investigated whether female parasitism risk resulted from being near singing males. I found that females can become …

Histopathologic Aspects In Plagioscion Squamosissimus (Heckel, 1940) Induced By Neoechinorhynchus Veropesoi, Metacestodes And Anisakidae Juveniles = Aspectos Histopatólogicos Em Plagioscion Squamosissimus Induzidos Por Neoechinorhynchus Veropesoi, Metacestódeos E Juvenis Da Família Anisakidae, Francisco Tiago De Vasconcelos Melo, Rogério Antonio Ribeiro Rodrigues, Elane Guerreiro Giese, Scott Lyell Gardner, Jeannie Nascimento Dos Santos

Scott L. Gardner Publications

Abstract

Plagioscion squamosissimus (Heckel 1840), a fish endemic to the Amazon Basin and commonly known as the “silver croaker,” plays an important role in the ecology and economy of Pará State, Brazil. Knowledge of host-parasite relationships is important to understanding the role of parasites in the control of natural host populations. This work describes histopathological aspects caused by several common intestinal parasites found during a helminthological survey of fish in northern Brazil. We observed a high prevalence of helminth infection, especially by J₃ nematode juveniles of the family Anisakidae and metacestodes of the family Protocephalidae (both with 100% prevalence). …

Benthic And Planktonic Microalgal Community Structure And Primary Productivity In Lower Chesapeake Bay, Matthew Reginald Semcheski

Biological Sciences Theses & Dissertations

Microalgal populations are trophically important to a variety of micro- and macroheterotrophs in marine and estuarine systems. In Chesapeake Bay, microalgae facilitate the survival and development of ecologically and economically relevant fauna, including shellfish and finfish populations. While regarded as significant components of coastal environments, microphytobenthic communities are historically understudied. In Chesapeake Bay, the importance of phytoplankton to the ecosystem is understood, but the contribution of microphytobenthos remains unclear. This project surveys intertidal microphytobenthic communities, in relation to phytoplankton communities, around lower Chesapeake Bay describing the taxonomic makeup of these populations, coupled with quantification of cell abundance, biomass, and primary …

Influence Of Introgression And Geological Processes On Phylogenetic Relationships Of Western North American Mountain Suckers (Pantosteus, Catostomidae), Peter J. Unmack, Thomas E. Dowling, Nina J. Laitinen, Carol L. Secor, Richard L. Mayden, Dennis K. Shiozawa, Gerald R. Smith

Biological Sciences Faculty Research Publications

Intense geological activity caused major topographic changes in Western North America over the past 15 million years. Major rivers here are composites of different ancient rivers, resulting in isolation and mixing episodes between river basins over time. This history influenced the diversification of most of the aquatic fauna. The genus Pantosteus is one of several clades centered in this tectonically active region. The eight recognized Pantosteus species are widespread and common across southwestern Canada, western USA and into northern Mexico. They are typically found in medium gradient, middle-elevation reaches of rivers over rocky substrates. This study (1) compares molecular data …

Evolutionary Relationships Of The Critically Endangered Frog Ericabatrachus Baleensis Largen, 1991 With Notes On Incorporating Previously Unsampled Taxa Into Large-Scale Phylogenetic Analyses, Karen Siu-Ting, David J. Gower, Davide Pisani, Roman Kassahun, Fikirte Gebresenbet, Michele Menegon, Abebe A. Mengistu, Samy A. Saber, Rafael O. De Sá, Mark Wilkinson, Simon P. Loader

Biology Faculty Publications

Background: The phylogenetic relationships of many taxa remain poorly known because of a lack of appropriate data and/or analyses. Despite substantial recent advances, amphibian phylogeny remains poorly resolved in many instances. The phylogenetic relationships of the Ethiopian endemic monotypic genus Ericabatrachus has been addressed thus far only with phenotypic data and remains contentious.

Results: We obtained fresh samples of the now rare and Critically Endangered Ericabatrachus baleensis and generated DNA sequences for two mitochondrial and four nuclear genes. Analyses of these new data using de novo and constrained-tree phylogenetic reconstructions strongly support a close relationship between Ericabatrachus and …

Insights Into The Development And Evolution Of Exaggerated Traits Using De Novo Transcriptomes Of Two Species Of Horned Scarab Beetles, Ian A. Warren, J. Cristobal Vera, Annika Johns, Robert Zinna, James H. Marden, Douglas J. Emlen, Ian Dworkin, Laura C. Lavine

Biological Sciences Faculty Publications

Scarab beetles exhibit an astonishing variety of rigid exo-skeletal outgrowths, known as ‘‘horns’’. These traits are often sexually dimorphic and vary dramatically across species in size, shape, location, and allometry with body size. In many species, the horn exhibits disproportionate growth resulting in an exaggerated allometric relationship with body size, as compared to other traits, such as wings, that grow proportionately with body size. Depending on the species, the smallest males either do not produce a horn at all, or they produce a disproportionately small horn for their body size. While the diversity of horn shapes and their behavioural ecology …

Invasive Plant Erodes Local Song Diversity In A Migratory Passerine, Yvette K. Ortega, Aubree Benson, Erick Greene

Biological Sciences Faculty Publications

Exotic plant invasions threaten ecosystems globally, but we still know little about the specific consequences for animals. Invasive plants can alter the quality of breeding habitat for songbirds, thereby impacting important demographic traits such as dispersal, philopatry, and age structure. These demographic effects may in turn alter song-learning conditions to affect song structure and diversity. We studied Chipping Sparrows (Spizella passerina) breeding in six savannas that were either dominated by native vegetation or invaded by spotted knapweed (Centaurea stoebe), an exotic forb known to diminish food resources and reproductive success. Here, we report that the prevalence of older birds was …

Riverine Macrosystems Ecology: Sensitivity, Resistance, And Resilience Of Whole River Basins With Human Alterations, Kevin E. Mccluney, N Leroy Poff, Margaret A. Palmer, James H. Thorp, Geoffrey C. Poole, Bradley S. Williams, Michael R. Williams, Jill S. Baron

Biological Sciences Faculty Publications

Riverine macrosystems are described here as watershed-scale networks of connected and interacting riverine and upland habitat patches. Such systems are driven by variable responses of nutrients and organisms to a suite of global and regional factors (eg climate, human social systems) interacting with finer-scale variations in geology, topography, and human modifications. We hypothesize that spatial heterogeneity, connectivity, and asynchrony among these patches regulate ecological dynamics of whole networks, altering system sensitivity, resistance, and resilience. Long-distance connections between patches may be particularly important in riverine macrosystems, shaping fundamental system properties. Furthermore, the type, extent, intensity, and spatial configuration of human activities …

Tribute To Tinbergen: The Place Of Animal Behavior In Biology, Joan E. Strassmann

Biology Faculty Research

Tinbergen is famous for emphasizing behavioral fieldwork and experimentation under natural circumstances, for founding the field of ethology, for getting a Nobel Prize, and for mentoring Richard Dawkins. He is known for dividing behavior studies into physiology, development, natural selection, and evolutionary history. In the decades since Tinbergen was active, some of the best research in animal behavior fuses Tinbergen's questions, connecting genes to behavioral phenotypes, for example. Behavior is the most synthetic of the life sciences, because observing the actions of an organism can tell us what all those physical and physiological traits are for. Insights from behavior tell …

Testing Assumptions Of Coevolution In An Egg-Rejecting Brood Parasite Host: Uncovering Sensory, Cognitive, And Evolutionary Drivers Of Responses To Parasitism In American Robins (Turdus Migratorius), Rebecca Croston

Dissertations, Theses, and Capstone Projects

Hosts of brood parasitic birds face fitness costs associated with rearing unrelated offspring. In response, the recognition and rejection of parasitic eggs is a common host defense. Brown-headed cowbirds (Molothrus ater) challenge coevolutionary theory, because although they exploit over 200 host species, they lay non-mimetic eggs, and most hosts do not combat cowbird parasitism with egg rejection. American robins (Turdus migratorius) are one of a handful of cowbird hosts known to recognize and remove cowbird eggs from the nest. I addressed the mechanistic and evolutionary drivers of egg rejection in this host species, by disentangling the roles of spectral tuning …

How Important Is Land-Based Foraging To Polar Bears (Ursus Maritimus) During The Ice-Free Season In Western Hudson Bay? An Examination Of Dietary Shifts, Compositional Patterns, Behavioral Observations And Energetic Contributions, Linda J. Gormezano

Dissertations, Theses, and Capstone Projects

Trophic mismatches between predators and their prey are increasing as climate change causes decoupling of phenological relationships. Predators linked to the life histories of a particular prey will have a more difficult time persisting through environmental change unless they can alter their behavior to maintain the historical match or possess the ability to pursue alternate prey. Arctic predators typically possess flexible foraging strategies to survive in the labile environment, however, quantifying the limits of those strategies can be difficult when life history information is incomplete. In such cases, piecing together different aspects of a predator's foraging behavior, particularly when environmental …

Mutation Of A Dna Repair Enzyme Causes Lupus In Mice, Ali Senejani, Yanfeng Liu, Dawit Kidane, Stephen E. Maher, Caroline J. Zeiss, Hong-Jae Park, Michael Kashgarian, Jennifer Madison Mcniff, Daniel Zelterman, Alfred L.M. Bothwell, Joann B. Sweasy

Biology and Environmental Science Faculty Publications

A replication study of a previous genome-wide association study (GWAS) suggested that a SNP linked to the POLβ gene is associated with systemic lupus erythematosus (SLE). This SNP is correlated with decreased expression of Pol β, a key enzyme in the base excision repair (BER) pathway. To determine whether decreased Pol β activity results in SLE, we constructed a mouse model of POLβ that encodes an enzyme with slow DNA polymerase activity. We show that mice expressing this hypomorphic POLβ allele develop an autoimmune pathology that strongly resembles SLE. Of note, the mutant mice have shorter immunoglobulin heavy-chain junctions and …

Developmental Link Between Sex And Nutrition; Doublesex Regulates Sex-Specific Mandible Growth Via Juvenile Hormone Signaling In Stag Beetles, Hiroki Gotoh, Hitoshi Miyakawa, Asano Ishikawa, Yuki Ishikawa, Yasuhiro Sugime, Douglas J. Emlen, Laura C. Lavine, Toru Miura

Biological Sciences Faculty Publications

Sexual dimorphisms in trait expression are widespread among animals and are especially pronounced in ornaments and weapons of sexual selection, which can attain exaggerated sizes. Expression of exaggerated traits is usually male-specific and nutrition sensitive. Consequently, the developmental mechanisms generating sexually dimorphic growth and nutritiondependent phenotypic plasticity are each likely to regulate the expression of extreme structures. Yet we know little about how either of these mechanisms work, much less how they might interact with each other. We investigated the developmental mechanisms of sex-specific mandible growth in the stag beetle Cyclommatus metallifer, focusing on doublesex gene function and its …

Warming, Soil Moisture, And Loss Of Snow Increase Bromus Tectorum’S Population Growth Rate, Aldo Compagnoni, Peter B. Adler

Green Canyon Environmental Research Area, Logan Utah

Climate change threatens to exacerbate the impacts of invasive species. In temperate ecosystems, direct effects of warming may be compounded by dramatic reductions in winter snow cover. Cheatgrass (Bromus tectorum) is arguably the most destructive biological invader in basins of the North American Intermountain West, and warming could increase its performance through direct effects on demographic rates or through indirect effects mediated by loss of snow. We conducted a two-year experimental manipulation of temperature and snow pack to test whether 1) warming increases cheatgrass population growth rate and 2) reduced snow cover contributes to cheatgrass’ positive response to …

A Unique Covalent Bond In Basement Membrane Is A Primordial Innovation For Tissue Evolution, Aaron L. Fidler, Roberto M. Vanacore, Sergei V. Chetyrkin, Vadim K. Pedchenko, Gautam Bhave, Viravuth P. Yin, Cody L. Stothers, Kristie Lindsey Rose, W. Hayes Mcdonald, Travis A. Clark, Dorin-Bogdan Borza, Robert E. Steele, Michael T. Ivy, The Aspirnauts, Julie K. Hudson, Billy G. Hudson

Biology Faculty Research

We recently discovered that the collagen IV scaffolds of bovine, mouse, and Drosophila melanogaster tissues are stabilized by sulfilimine chemical bonds (S = N) (20⇓–22). The bond is a covalent cross-link between methionine-93 (Met93) and lysine-211 or hydroxylysine-211 (Lys211/Hyl211) residues that stabilizes the noncollagenous (NC1) interface of adjoining triple helical protomers (Fig. 1A). Peroxidasin, an animal heme peroxidase embedded in basement membrane, forms these sulfilimine cross-links by producing hypohalous acids as intermediates for Met93 oxidization (21, 22). Here, we explored whether the sulfilimine cross-link of collagen IV is a fundamental requirement in the genesis and evolution of tissues in Eumetazoa. …

Using Indicators Of Biotic Integrity For Assessment Of Stream Condition, Stephanie A. Ogren

Dissertations, Master's Theses and Master's Reports - Open

Multiple indices of biotic integrity and biological condition gradient models have been developed and validated to assess ecological integrity in the Laurentian Great Lakes Region. With multiple groups such as Tribal, Federal, and State agencies as well as scientists and local watershed management or river-focused volunteer groups collecting data for bioassessment it is important that we determine the comparability of data and the effectiveness of indices applied to these data for assessment of natural systems. We evaluated the applicability of macroinvertebrate and fish community indices for assessing site integrity. Site quality (i.e., habitat condition) could be classified differently depending on …

Variation In Setal Micromechanics And Performance Of Two Gecko Species, Travis J. Hagey, Jonathan B. Puthoff, Madisen Holbrook, Luke J. Harmon, Kellar Autumn

Biology

Biomechanical models of the gecko adhesive system typically focus on setal mechanics from a single gecko species, Gekko gecko. In this study, we compared the predictions from three mathematical models to experimental observations considering an additional gecko species Phelsuma grandis, to quantify interspecific variation in setal micromechanics. We also considered the accuracy of our three focal models: the frictional adhesion model, work of detachment model, and the effective modulus model. Lastly, we report a novel approach to quantity the angle of toe detachment using the Weibull distribution. Our results suggested the coupling of frictional and adhesive forces in isolated setal …

On The Challenges Of Modeling The Net Radiative Forcing Of Wetlands: Reconsidering Mitsch Et Al. 2013, Scott C. Neubauer

Biology Publications

Wetlands play a role in regulating global climate by removing carbon dioxide (CO2) from the atmosphere and sequestering it as soil carbon, and by emitting methane (CH4) and nitrous oxide (N2O) to the atmosphere. In a recent article in this journal (Mitsch et al. Landscape Ecol 28:583–597, 2013), CO2 sequestration and CH4 emissions were modeled for several freshwater wetlands that vary in vegetation type, climate, and hydrology. The authors of that study made significant errors that caused them to underestimate the importance of wetland CH4 emissions on climate dynamics. Here, I reanalyze the Mitsch et al. dataset and show that …

Assessing Perceived And Documented Crop Damage In A Tanzanian Village Impacted By Human-Elephant Conflict (Hec), Rebekah R. Hoffmeier-Karimi, Bruce A. Schulte

Biology Faculty Publications

In sub-Saharan Africa human-wildlife conflict (HWC) is a growing conservation issue and human-elephant conflict (HEC) is of special concern. Crop loss to wildlife comprises a main component of HWC. Deterrent methods for crop loss are numerous and such schemes could be more effective by an improved understanding of how farmers’ perceptions align with actual causes of crop loss. Our objective was to compare the perception by farmers of the causes and extent of crop damage to the measured crop damage in fields of maize (Zea mays) using different deterrent methods. We interviewed agriculturalists in the farming village of Miti Mirefu …

Impacts Of Environmental Pressures On The Reproductive Physiology Of Subpopulations Of Black Rhinoceros (Diceros Bicornis Bicornis) In Addo Elephant National Park, South Africa, Elizabeth Freeman, Jordana Meyer, Jed Bird, John Adendorff, Bruce A. Schulte, Rachel Santymire

Biology Faculty Publications

Black rhinoceros are an icon for international conservation, yet little is known about their physiology due to their secretive nature. To overcome these challenges, non-invasive methods were used to monitor rhinoceros in two sections of Addo Elephant National Park, South Africa, namely Addo and Nyathi. These sections were separated by a public road, and the numbers of elephants, predators and tourists were higher in Addo. Faecal samples (n = 231) were collected (from July 2007 to November 2010) from known individuals and analysed for progestagen and androgen metabolite (FPM and FAM, respectively) concentrations. As biotic factors could impact reproduction, …

Filarial Nematode Infection In Ixodes Scapularis Ticks Collected From Southern Connecticut, Pabbati Namrata, Jamie M. Miller, Madari Shilpa, Patlolla Raghavender Reddy, Cheryl Bandoski,, Michael J. Rossi, Eva Sapi

Biology and Environmental Science Faculty Publications

It was recently demonstrated that the lone star tick Amblyomma americanum could harbor filarial nematodes within the genus Acanthocheilonema. In this study, Ixodes scapularis (deer) ticks collected from Southern Connecticut were evaluated for their potential to harbor filarial nematodes. Non-engorged nymphal and adult stage Ixodes scapularis ticks were collected in Southern Connecticut using the standard drag method. In situ hybridization with filarial nematode specific sequences demonstrated the presence of filarial nematodes in Ixodes ticks. Filarial nematode specific DNA sequences were amplified and confirmed by direct sequencing in Ixodes nymphal and adult ticks using either general filarial nematode or Onchocercidae family …

Effects Of River Current Inflow On Dissolved Oxygen And Temperature Of Refuge Zones For Cisco In Lake Bemidji, Bryant C. Swenson

Journal of Earth and Life Science

The objectives of this study were to (1) determine if the inflow current from the Mississippi River affects temperature and dissolved oxygen in Lake Bemidji, (2) determine how the amount of suitable cisco Coregonus artedi habitat changes over the summer in Lake Bemidji, and (3) predict how much cisco habitat would be available under a climate warming scenario. Summer fish kill of cisco occurs in most years on Lake Bemidji resulting from low dissolved oxygen in the hypolimnion and high water temperatures in the epilimnion. Dissolved oxygen and temperature profiles provided evidence to suggest the north basin is more suitable …

The Effect Of Barometric Pressure On Feeding Activity Of Yellow Perch, Daniel Vanderweyst

Journal of Earth and Life Science

This is the first study to our knowledge that has attempted to relate feeding activity of fish to barometric pressure. This study was conducted with the expectation that a difference in food ingestion would occur in a game fish species at different barometric pressures. The overall objective of this study is to determine if barometric pressure influences the feeding activity of a popular game fish. Yellow perch (Perca flavescens) were collected by seine and trap net from Lake Bemidji 12 September through 24 October 2013. The range in size and weight of yellow perch used for this study …

Use Of Cast Nets And Seine Hauls To Estimate Abundance Of Age-0 Yellow Perch, Michael Vaske

Journal of Earth and Life Science

Knowledge about fish population dynamics is essential for developing management plans and evaluating management success. In many lakes, yellow perch (Perca flavescens) are the main forage for many upper level predators and recreational fish species. To better manage recreational fisheries, an accurate estimate of prey abundance is necessary. The objectives of the study were to sample the littoral and limnetic zone to better estimate population of age-0 yellow perch, and obtain an estimate of the proportion of yellow perch being missed by traditional littoral seining methods. Littoral seines were conducted at three randomly selected locations in the south …

Changing Body Condition In Walleye With Reference To Ideal Sample Size Requirements, Kevin Longtin

Journal of Earth and Life Science

The objective of this study was to determine if walleye Sander vitreus percent dry weight, a measure of condition, differed among summer months of 2014 on Maple Lake, Minnesota. A second objective was to determine if there was a relationship between condition and body temperature, total length, or wet weight. Between three and six walleyes were collected per month by hook and line methods. All fish had internal body temperatures taken at the time of capture and were oven dried in the laboratory at 80 °C in order to measure percent dry weight. There was no relationship between condition and …

Bacon's Swamp- Ghost Of A Central Indiana Natural Area Past, Rebecca W. Dolan

Scholarship and Professional Work - LAS

Bacon’s Swamp was identified in the 1920s as a ca. 12 ha glacial kettle lake bog system at the southernmost limits of these habitats in Indiana. Located just 9.6 km from the center of Indianapolis, the site was all but destroyed in the mid-20th century by urban expansion. Prior to habitat conversion at the site, Bacon’s Swamp was a frequent location for Butler University ecology class field trips and student research projects. Herbarium specimens and published inventory records allow for analysis of the historical vegetation of Bacon’s Swamp using modern techniques. Floristic Quality Assessment applied to these historical records reveals …

Progress Towards A Molecular Phylogeny Of Tachinidae, Year Two, Isaac S. Winkler, John O. Stireman Iii, John K. Moulton, Pierfilippo Cerretti, Jeremy D. Blaschke

Biological Sciences Faculty Publications

We reported last year (Stireman et al. 2013) in The Tachinid Times on our collaborative project, funded by the U.S. National Science Foundation, to study the phylogeny of Tachinidae on a worldwide scale. Since that report, we have made some significant progress towards our goal of assembling a robust phylogenetic tree for Tachinidae. Notably, Cerretti et al. (in press) completed a phylogenetic study using 135 morphological characters from 180 tachinid genera. Results from this study largely reflect, with some interesting exceptions, what we are finding from preliminary analyses of our molecular data. Although sampling of taxa and genes for the …