Ecology and Evolutionary Biology Commons^™

Characterizing Habitat Suitability For Gulf Sturgeon (Acipenser Oxyrinchus Desotoi) In Southern Louisiana, Jenna N. Brogdon

LSU Master's Theses

A generalized additive modeling (GAM) framework was used to characterize fish-habitat relationships and develop habitat suitability maps to predict spatiotemporal and ontogenetic shifts in Gulf sturgeon distribution within an impacted estuary in the northern Gulf of Mexico, Lake Pontchartrain. Gulf sturgeon (n = 103) were fitted with acoustic transmitters in the Pearl River during the early summer and fall from 2013 to 2018, and an array of acoustic receivers (n = 81) was used to monitor Gulf sturgeon habitat use and movement in the estuary from 2016 to 2019. Daily presence data from the telemetry array were paired with environmental …

Experimental Infection Of Brazilian Free-Tailed Bats (Tadarida Brasiliensis) With Two Strains Of Sars-Cov-2, Angela M. Bosco-Lauth, Stephanie M. Porter, Karen A. Fox, Mary E. Wood, Daniel Neubaum, Marissa Quilici

United States Department of Agriculture Wildlife Services: Staff Publications

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is presumed to have originated from wildlife and shares homology with other bat coronaviruses. Determining the susceptibility of North American bat species to SARS-CoV-2 is of utmost importance for making decisions regarding wildlife management, public health, and conservation. In this study, Brazilian free-tailed bats (Tadarida brasiliensis) were experimentally infected with two strains of SARS-CoV-2 (parental WA01 and Delta variant), evaluated for clinical disease, sampled for viral shedding and antibody production, and analyzed for pathology. None of the bats (n = 18) developed clinical disease associated with infection, shed infectious virus, or …

Developmental Basis Of Evolutionary Lung Loss In Plethodontid Salamanders, Zachary R. Lewis, Ryan R. Kerney, James Hanken

Biology Faculty Publications

One or more members of four living amphibian clades have independently dispensed with pulmonary respiration and lack lungs, but little is known of the developmental basis of lung loss in any taxon. We use morphological, molecular, and experimental approaches to examine the Plethodontidae, a dominant family of salamanders, all of which are lungless as adults. We confirm an early anecdotal report that plethodontids complete early stages of lung morphogenesis: Transient embryonic lung primordia form but regress by apoptosis before hatching. Initiation of pulmonary development coincides with expression of the lung-specification gene Wnt2b in adjacent mesoderm, and the lung rudiment expresses …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Long-Term Effect Of A Gnrh-Based Immunocontraceptive On Feral Cattle In Hong Kong, Rebecca Pinkham, Ka-Kei Koon, Jason To, Jason Chan, Flavie Vial, Matt Gomm, Douglas C. Eckery, Giovanna Massei

United States Department of Agriculture Wildlife Services: Staff Publications

Increasing human-wildlife conflicts worldwide are driving the need for multiple solutions to reducing “problem” wildlife and their impacts. Fertility control is advocated as a non-lethal tool to manage free-living wildlife and in particular to control iconic species. Injectable immunocontraceptives, such as GonaCon, stimulate the immune system to produce antibodies against the gonadotrophin-releasing hormone (GnRH), which in turn affects the release of reproductive hormones in mammals. Feral cattle (Bos indicus or Bos taurus) in Hong Kong are an iconic species whose numbers and impacts on human activities have increased over the last decade. Previous studies have proven that a …

Foraging Habitat Selection Of Shrubland Bird Community In Tropical Dry Forest, Anant Deshwal, Steven L. Stephenson, Pooja Panwar, Brett A. Degregorio, Ragupathy Kannan, John D. Willson

Biological Sciences Faculty Publications and Presentations

Habitat loss due to increasing anthropogenic disturbance is the major driver for bird population declines across the globe. Within the Eastern Ghats of India, shrubland bird communities are threatened by shrinking of suitable habitats due to increased anthropogenic disturbance and climate change. The development of an effective habitat management strategy is hampered by the absence of data for this bird community. To address this knowledge gap, we examined foraging sites for 14 shrubland bird species, including three declining species, in three study areas representing the shrubland type of forest community in the Eastern Ghats. We recorded microhabitat features within an …

Behavioral Responses Of A Parasitoid Fly To Rapidly Evolving Host Signals, E. Dale Broder, James H. Gallagher, Aaron W. Wikle, Cameron P. Venable, David M. Zonana, Spencer J. Ingley, Tanner C. Smith, Robin M. Tinghitella

Biological Sciences: Faculty Scholarship

Animals eavesdrop on signals and cues generated by prey, predators, hosts, parasites, competing species, and conspecifics, and the conspicuousness of sexual signals makes them particularly susceptible. Yet, when sexual signals evolve, most attention is paid to impacts on intended receivers (potential mates) rather than fitness consequences for eavesdroppers. Using the rapidly evolving interaction between the Pacific field cricket, Teleogryllus oceanicus, and the parasitoid fly, Ormia ochracea, we asked how parasitoids initially respond to novel changes in host signals. We recently discovered a novel sexual signal, purring song, in Hawaiian populations of T. oceanicus that appears to have evolved because it …

The First Record Of Scorpiops Bhutanensis Tikader & Bastawade, 1983 From China, With The First Report Of Its Female (Scorpiones: Scorpiopidae), He-Yu Lv, Zhi-Yong Di

Euscorpius

The first record of Scorpiops bhutanensis Tikader & Bastawade, 1983 from China (Xizang). An emended diagnosis, detailed redescription, and illustrations of the species are provided. Its female is reported here for the first time.

An Evaluation Of Ethograms Measuring Distinct Features Of Enrichment Use By Captive Chimpanzees (Pan Troglodytes), Julia L. Greeson, Kara I. Gabriel, John B. Mulcahy, Bonnie King Hendrickson, Susan D. Lonborg, Jay C. Holloway

Student Published Works

Environmental enrichment provides mental stimulation and minimizes abnormal behaviors in captive animals. In captive chimpanzees, individual animals may vary in the ways in which they benefit from enrichment or use enrichment devices, so investigating nuances in enrichment use may improve the welfare of captive chimpanzees. In the current study, three ethograms measuring distinct features of enrichment use (i.e., enrichment object, manipulation behavior, and social context) were evaluated by coding videos of captive chimpanzees (Pan troglodytes) at Chimpanzee Sanctuary Northwest in Cle Elum, WA. A total of 732 min and 58 s of video footage was coded from a larger video …

Feeding Ecology Of Highly Migratory Epipelagic Offshore Predators In The Western North Atlantic Ocean, Rachel Lorraine Hildebrand

All HCAS Student Capstones, Theses, and Dissertations

Describing trophic ecology of top predators in marine ecosystems is key to understanding the dynamics of these environments. Feeding ecologies of large predatory fishes were assessed using a combination of stomach content and stable isotope analysis. The target species for this study inhabit the epipelagic ecosystem of the U.S. South Atlantic Bight in the western North Atlantic Ocean. The studied species included five tuna species, five billfish species, Common Dolphinfish, and Wahoo. The goal of this study was to describe and compare the trophic dynamics of each species. From these data, the trophic complex of the offshore pelagic ecosystem was …

Scorpions Of The Horn Of Africa (Arachnida, Scorpiones). Part Xxviii. Scorpions Of Djibouti, František Kovařík, Graeme Lowe

Euscorpius

All scorpion species known from Djibouti are listed, with color photographs and maps of their distribution. Buthus awashensis Kovařík, 2011 known from Ethiopia and Somaliland is reported for the first time from Djibouti. The diagnosis of Orthochirus afar Kovařík & Lowe, 2016 is revised; O. borrii Rossi, 2017 is determined to be a junior synonym of O. afar Kovařík & Lowe, 2016 syn. n.; O. aristidis (Simon, 1882) syn. res. is returned to synonymy with O. olivaceus Karsch, 1881; and O. arenicola Lourenço & Ythier, 2021, is relegated to the status of nomen dubium. Hemiscorpius lipsae sp. n. …

Reproductive Ecology And Microbial Communities From Wood Duck Nest Boxes In Georgia And Florida, Jake Shurba

All Theses

Wood ducks (Aix sponsa) are an important game species throughout the Atlantic Flyway that was nearly extirpated by the early 20^th century due to overhunting and the loss of habitat. Wood ducks are secondary cavity-nesters that utilize artificial nest boxes and natural cavities. It is reported that the use of nest boxes is likely what led to re-establishment of the species in North America. Where boxes are numerous, overuse of boxes by multiple hens throughout a nesting season can occur and result in a buildup of bacteria, parasites and other potentially detrimental pathogens that can impact egg …

Bacterial Chondronecrosis With Osteomyelitis In Broilers: Genomics, Phylogenomics, And Methods To Detect Specific Pathogens During Outbreaks., Abdulkarim Abdulaziz A. Shwani

Graduate Theses and Dissertations

Lameness is a major issue in animal welfare and the broiler industry. Bacterial chondronecrosis with osteomyelitis (BCO) is one of the main causes of lameness. Many staphylococcal species, including Staphylococcus agnetis isolate 908, have been isolated from the bones and blood of lame broilers at the University of Arkansas. Staphylococcus agnetis is a coagulase-variable, Gram-positive bacterial species that has been previously associated with subclinical or mild clinical cases of mastitis in dairy cattle. The annotated complete genome of hypervirulent strain 908 was published at NCBI. In this study, it has been compared to nine genomes we assembled for hypervirulent isolates …

Nestedness And Modularity Of Avian Metacommunities Across Gradients Of Chesapeake Bay Island Characteristics, Grant Walter Bowers

Biological Sciences Theses & Dissertations

Islands are not only great models for understanding the ways in which communities are linked by the dispersal of their members to form metacommunities, but are of particular interest to conservationists. One important aspect of metacommunity structure is the degree of nestedness—whether or not less speciose communities are perfect subsets of more speciose communities. Another important metric of metacommunity structure is modularity—the degree to which communities belong to modules composed of other communities that share the same species but have little species overlap with communities from different modules. Environmental gradients have received insufficient attention as predictors of metacommunity nestedness and …

In Vivo Efficacy Of Pyrantel Pamoate As A Post-Exposure Prophylactic For Rat Lungworm (Angiostrongylus Cantonensis), John Jacob, Argon Steel, Lisa Kaluna, Steven Hess, Israel Leinbach, Carmen Antaky, Robert Sugihara, Lindsey Hamilton, Peter Follett, Kathleen Howe, Steven Jacquier, Supakit Wongwiwatthananukit, Susan Jarvi

United States Department of Agriculture Wildlife Services: Staff Publications

Rat lungworm (Angiostrongylus cantonensis) is a neurotropic nematode, and the leading cause of eosinophilic meningitis worldwide. The parasite is usually contracted through ingestion of infected gastropods, often hidden in raw or partially cooked produce. Pharmaceutical grade pyrantel pamoate was evaluated as a post-exposure prophylactic against A. cantonensis. Pyrantel pamoate is readily available over-the-counter in most pharmacies in the USA and possesses anthelmintic activity exclusive to the gastrointestinal tract (GIT). Administering pyrantel pamoate immediately after exposure should theoretically paralyze the larvae in the GIT, causing the larvae to be expelled via peristalsis without entering the systemic circulation. In this study, pyrantel …

Conservation Of Open-Canopy-Associated Wildlife: Multi-Scale Management Impacts On Imperiled Herpetofauna, Ethan Joseph Royal

Graduate Theses and Dissertations

The loss of open-canopy ecosystems throughout North America has precipitated declines in reptile and amphibian species associated with these habitat types. Current efforts to restore open-canopy ecosystems are underway in many areas, but the local distributions of, habitat characteristics required by and the effects of management actions on many herpetofauna species are poorly understood or entirely unknown. Research examining relationships among herpetofauna and their environments is often complicated by the extremely low detectability seen in many studies. We used landscape-scale, assemblage-level surveys to investigate the occupancy patterns and habitat associations of open-canopy-associated herpetofauna in two regions, as well as gain …

Current Ecotoxicity Testing Needs Among Selected U.S. Federal Agencies, Patricia Ceger, Natalia Garcia-Reyero Vinas, David Allen, Elyssa Arnold, Raanan Bloom, Jennifer C. Brennan, Carol Clarke, Karen Eisenreich, Kellie Fay, Jonathan Hamm, Paula F.P. Henry, Katherine E. Horak, Wesley Hunter, Donna Judkins, Patrice Klein, Nicole Kleinstreuer, Kara Koehrn, Carlie A. Lalone, James P. Laurenson, Jessica K. Leet, Anna Lowit, Scott G. Lynn, Teresa Norberg-King, Edward J. Perkins, Elijah J. Petersen, Barnett A. Rattner, Catherine S. Sprankle, Thomas Steeger, Jim E. Warren, Sarah Winfield, Edward Odenkirchen

United States Department of Agriculture Wildlife Services: Staff Publications

U.S. regulatory and research agencies use ecotoxicity test data to assess the hazards associated with substances that may be released into the environment, including but not limited to industrial chemicals, pharmaceuticals, pesticides, food additives, and color additives. These data are used to conduct hazard assessments and evaluate potential risks to aquatic life (e.g., invertebrates, fish), birds, wildlife species, or the environment. To identify opportunities for regulatory uses of non-animal replacements for ecotoxicity tests, the needs and uses for data from tests utilizing animals must first be clarified. Accordingly, the objective of this review was to identify the ecotoxicity test data …

Defining An Epidemiological Landscape That Connects Movement Ecology To Pathogen Transmission And Pace-Of-Life, Kezia Manlove, Mark Wilber, Lauren White, Guillaume Bastille-Rousseau, Anni Yang, Marie L.J. Gilbertson, Meggan E. Craft, Paul C. Cross, George Wittemyer, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

Pathogen transmission depends on host density, mobility and contact. These components emerge from host and pathogen movements that themselves arise through interactions with the surrounding environment. The environment, the emergent host and pathogen movements, and the subsequent patterns of density, mobility and contact form an ‘epidemiological landscape’ connecting the environment to specific locations where transmissions occur. Conventionally, the epidemiological landscape has been described in terms of the geographical coordinates where hosts or pathogens are located. We advocate for an alternative approach that relates those locations to attributes of the local environment. Environmental descriptions can strengthen epidemiological forecasts by allowing for …

The Role Of Nest Location On The Reproductive Success Of Piping Plovers Breeding At Rockaway Beach, New York, Clara I.D. Arndtsen

Theses and Dissertations

The study’s goal was to learn what aspects of the piping plover experience affect reproductive outcomes at Rockaway Beach Endangered Species Nesting Area. Nest location was found to help predict reproductive success. Nests further from American oystercatcher nests were likely to fledge more chicks. Reproductive success was low in 2021.

Optimising Response To An Introduction Of African Swine Fever In Wild Pigs, Kim M. Pepin, Vienna R. Brown, Anni Yang, James C. Beasley, Raoul Boughton, Kurt C. Vercauteren, Ryan S. Miller, Sarah N. Bevins

United States Department of Agriculture Wildlife Services: Staff Publications

African swine fever virus (ASFv) is a virulent pathogen that threatens domestic swine industries globally and persists in wild boar populations in some countries. Persistence in wild boar can challenge elimination and prevent disease-free status, making it necessary to address wild swine in proactive response plans. In the United States, invasive wild pigs are abundant and found across a wide range of ecological conditions that could drive different epidemiological dynamics among populations. Information on the size of the control areas required to rapidly eliminate the ASFv in wild pigs and how this area should change with management constraints and local …

Reanalysis Of Teruelius And Grosphus (Scorpiones: Buthidae) With Descriptions Of Two New Species, Graeme Lowe, František Kovařík

Euscorpius

No abstract provided.

Amplification Of Black Vulture (Coragyps Atratus) Dna From Regurgitated Food Pellets, Daniel R. Taylor, Bryan M. Kluever, John S. Humphrey, Iona M. Hennessy, Amber Sutton, William E. Bruce, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Studies that rely on noninvasive collection of DNA for birds often use feces or feathers. Some birds, such as vultures, regurgitate undigested matter in the form of pellets that are commonly found under roost sites. Our research demonstrates that regurgitated pellets are a viable, noninvasive source of DNA for molecular ecology studies of vultures. Our objectives were to amplify 5 microsatellite loci designed for distinguishing Turkey Vultures (Cathartes aura) and Black Vultures (Coragyps atratus) in a single, multiplexed PCR, and to determine how long the target nuclear DNA persists after a vulture pellet is regurgitated and …

Abundance, Site-Fidelity, And Association Patterns Of Coastal Bottlenose Dolphins (Tursiops Truncatus) Off Southeast Florida, Graysen D. Boehning

All HCAS Student Capstones, Theses, and Dissertations

The coastal bottlenose dolphin is well studied throughout its natural range, however, most of the study areas comprised wide, well-protected habitats such as bays and estuaries, and not narrow coastal sandbanks. This study identifies a residential group of coastal bottlenose dolphins utilizing the narrow sandbanks within the Northwestern Atlantic waters off the coast of Palm Beach County, Florida, USA. From 2014-2020, 313 boat surveys were conducted, and 585 individual dolphins were identified using photo-ID. Twenty-four animals were determined to be full-time and 66 animals were determined to be part-time residents. Full-time and part-time residents associated in three social tribes, with …

Evolution Of Freshwater Fishes In The Northern Neotropics, Diego Elias

LSU Doctoral Dissertations

The northern Neotropics (NN) represents one of the most geologically-complex regions on the planet, composed of island-like geological blocks that have undergone multiple episodes of isolation and connectivity at various geological times. The riverscapes of the NN harbor a unique assemblage of freshwater fishes. In contrast to the freshwaters systems of South America, which are dominated by ostariophysan lineages, the aquatic systems of the NN are dominated by lineages of two families: Cichlidae (cichlids) and Poeciliidae (livebearers). It has been suggested that the geologically complex nature of the region allowed ancestors of cichlids and livebearers to colonize and radiate within …

Seasonal Climatic Niche And Migration Movements Of Double-Crested Cormorants, D. Tommy King, Guiming Wang, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Avian migrants are challenged by seasonal adverse climatic conditions and energetic costs of long-distance flying. Migratory birds may track or switch seasonal climatic niche between the breeding and non-breeding grounds. Satellite tracking enables avian ecologists to investigate seasonal climatic niche and circannual movement patterns of migratory birds. The Double-crested Cormorant (Nannopterum auritum, hereafter cormorant) wintering in the Gulf of Mexico (GOM) migrates to the Northern Great Plains and Great Lakes and is of economic importance because of its impacts on aquaculture. We tested the climatic niche switching hypothesis that cormorants would switch climatic niche between summer and winter …

Insights Into The Speciation Process From Genomic And Phenotypic Analysis Of An Avian Hybrid Zone In Amazonia, Glaucia Christina Del-Rio

LSU Doctoral Dissertations

Understanding the outcome of secondary contact is essential to shed light on the mechanisms governing species formation and maintenance. In Amazonia, closely related bird taxa with limited dispersal abilities are often separated by rivers, which presumably act as dispersal barriers. However, at the headwaters, rivers cease to be dispersal barriers, and this generates opportunities for secondary contact. In my dissertation, I studied genomic mechanisms associated with phenotypic differences, mitochondrial DNA structure, and putative reproductive barriers between two hybridizing Amazonian bird species in the genus Rhegmatorhina, a group of antbirds that find their arthropod prey exclusively by following army-ant swarms. …

Breeding Ecology Of Mottled Ducks In Southwestern Louisiana, Elizabeth Sophia Bonczek

LSU Doctoral Dissertations

Mottled ducks are a resident species found in the southern United States that rely on coastal marsh and associated habitat to fulfill the needs of the entirety of their annual cycle. Population monitoring has revealed declines in western Gulf Coast (WGC) mottled ducks since 2008. Mottled duck populations are influenced by survival and recruitment, and changes in these factors may contribute to population declines. The overarching goal of this project was to identify the mechanisms potentially limiting WGC mottled ducks.

I captured adult female mottled ducks during molt on Rockefeller Wildlife Refuge and adjacent lands in southwestern Louisiana from 2017–2019. …

Solar Radiation And Soil Moisture Drive Tropical Forest Understory Responses To Experimental And Natural Hurricanes, J. Aaron Hogan, Joanne M. Sharpe, Ashley Van Beusekom, Sarah Stankavich, Samuel Matta Carmona, John E. Bithorn, Jamarys Torres-Díaz, Grizelle González, Jess K. Zimmerman, Aaron B. Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Tropical forest understory regeneration occurs rapidly after disturbance with compositional trajectories that depend on species availability and environmental conditions. To predict future tropical forest regeneration dynamics, we need a deeper understanding of how pulse disturbance events, like hurricanes, interact with environmental variability to affect understory demography and composition. We examined fern and sapling mortality, recruitment, and community composition in relation to solar radiation and soil moisture using 17 years of forest dynamics data (2003–2019) from the Canopy Trimming Experiment in the Luquillo Experimental Forest, Puerto Rico. Solar radiation increased 150% and soil moisture increased 40% following canopy trimming of experimental …

Comparative Susceptibility Of Eastern Cottontails And New Zealand White Rabbits To Classical Rabbit Haemorrhagic Disease Virus (Rhdv) And Rhdv2, Fawzi Mohamed, Thomas Gidlewski, Mary L. Berninger, Heather M. Petrowski, Alexa J. Bracht, Carla Bravo De Rueda, Roger W. Barrette, Meredith Grady, Emily S. O'Hearn, Charles E. Lewis, Karen E. Moran, Tracy L. Sturgill, Lorenzo Capucci, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Rabbit haemorrhagic disease virus (RHDV) is associated with high morbidity and mortality in the European rabbit (Oryctolagus cuniculus). In 2010, a genetically distinct RHDV named RHDV2 emerged in Europe and spread to many other regions, including North America in 2016. Prior to this study it was unknown if eastern cottontails (ECT(s); Sylvilagus floridanus), one of the most common wild lagomorphs in the United States, were susceptible to RHDV2. In this study, 10 wild-caught ECTs and 10 New Zealand white rabbits (NZWR(s); O. cuniculus) were each inoculated orally with either RHDV (RHDVa/GI.1a; n = 5 per species) or RHDV2 (a recombinant …

Scorpions Of China: An Updated Checklist With Comments On Some Taxonomic Issues (Arachnida: Scorpiones), Victoria Tang

Euscorpius

An updated checklist of scorpions of China (52 species belonging to 13 genera and six families) is provided, with Chinese name equivalents and an illustrated map of all localities. Colored photos of the Chinese population of Mesobuthus thersites (C. L. Koch, 1839) and one Olivierus sp. in vivo habitus are provided for the first time. The recent taxonomic changes are summarized. The monotypic genus Tibetiomachus (Hormuridae) with its single species T. himalayensis is considered a nomen dubium. The validity of the previously synonymized Scorpiops atomatus Qi et al., 2005 and S. validus (Di et al., 2010) (Scorpiopidae) is questioned, …