Biotechnology Commons^™

Every Publication Needs An Author Verified Tl;Dr Statement, Sarah Oerther, Daniel B. Oerther

Civil, Architectural and Environmental Engineering Faculty Research & Creative Works

No abstract provided.

Engineering Geological And Groundwater Mapping Of Negara Brunei Darussalam For Urban Planning, Nur Thaqifah Junaidi, Siti Lieyana Azffri, Afiq Aiman Jaya, Muhammad Asri Akmal Suhip, Stefan Herwig Gödeke

ASEAN Journal on Science and Technology for Development

Engineering geology and Hydrogeology play a crucial role in the development of urban areas. Without a thorough geological and hydrogeological understanding, urban development can be risky and prone to numerous challenges. In this study, we aim to conduct engineering geological and groundwater mapping of Brunei utilizing data from 614 sacrificial investigative boreholes drilled over the course of 40 years for geotechnical investigation and housing development. Borehole parameters such as soil data, SPT N-values, depth to groundwater and surface elevation were gathered and evaluated. Soil investigation in the study area revealed predominantly clayey sediments with SPT N-values ranging from 0 to …

Kadysnet: A Novel Approach To Dyslexia Prediction In Children: Combining Handwritten Text Recognition With A Hybrid Cnn-Bilstm-Ctc Model And Personalized Learning Strategies, Shailesh Prabhakar Patil, Ravindra Sadashivrao Apare, Ravindra Honaji Borhade, Parikshit Narendra Mahalle

ASEAN Journal on Science and Technology for Development

This study introduces a novel approach for early dyslexia detection in children through automated handwriting analysis, integrating a hybrid CNN-BiLSTM-CTC architecture with personalized learning strategies. Our method combines a custom CNN-BiLSTM-CTC model with tailored educational interventions to support dyslexic learners. We analyzed children's handwritten text images in English, collected from specially designed tests involving word rewriting, sentence reconstruction, and paragraph composition, particularly challenging tasks for dyslexic individuals. Notably, our CNN-BiLSTM-CTC model achieved the best result with an accuracy of 97.67%, outperforming other architectures. Compared to pre-trained models like EfficientNetB7, DenseNet121, and MobileNetV2, our custom CNN-BiLSTM-CTC model demonstrated superior performance. Key …

Unwritten Rules And Oral Transmission In Architectural Proportion Systems: Case Study Of Bubungan Tinggi House, Huzairin. Muhammad Deddy, Dila Nadya Andini, Rudi Hartono, Anna Oktaviana, Dahliani Dahliani

ASEAN Journal on Science and Technology for Development

The proportional systems in vernacular architecture often exist without formal written codification, raising questions about their transmission across generations. Bubungan Tinggi House which is a replica of the Banjar Kingdom palace was built by Banjarese merchants and aristocrats from the 16th to the 19th centuries, showing a uniform aesthetic quality, which indicates a regularity in the proportions of its form. However, no historical written manuals detailing these proportions are known to exist. To prove the existence of regularity in the Bubungan Tinggi House proportion system, research was conducted by taking 7 Bubungan Tinggi House samples spread across South Kalimantan province, …

Leveraging Strategic Information Systems For Competitive Advantage: A Case Study Of Veolia As A Multinational Enterprise, Sohail Nawaz Sabir

ASEAN Journal on Science and Technology for Development

Instead of examining several components that link planning and strategy implementation, researchers have focused on the alignment of IT and business, as well as the Strategic Information Systems Planning (SISP) process. The goal of this study is to examine several approaches that can close the gap between IT project planning and execution. Therefore, the primary objective of the proposed study is to examine SISP implementation strategies that can be theorized in the context of Veolia, a global multinational corporation (MNC). The primary aspects influencing the SISP for this study are the frequency of planning, the function of IT/business managers, assessment …

Numerical And Experimental Investigation Of Mechanical Performance, Interface Pressure Distribution, And Structural Safety Of Glass Fiber-Reinforced Below-Knee Prosthetic Sockets, Saif M. Abbas, Kadhim K. Resan, Mohammed Ali Abdulrehman, Ali M. Flayyih

ASEAN Journal on Science and Technology for Development

In this study, below-knee prosthetic sockets reinforced with glass-fiber composites were investigated experimentally and numerically. In compliance with the ASTM guidelines, two lay-up configurations were constructed and tested for tensile and fatigue strengths. During the gait trials, the F-socket system was used to measure the interface pressure distribution. Stress, deformation, and safety factor responses under physiological loading conditions were simulated using complementary finite element analysis (FEA). With the yield strength, ultimate tensile strength, and fatigue life significantly improved in the reinforced group, the results demonstrated that the 10-layer laminate displayed superior mechanical performance relative to the 8-layer laminate; however, this …

Performance Evaluation And Economic Analysis Of Lithium Iron Phosphate (Lfp) And Nickel Manganese Cobalt (Nmc) Batteries In Electric Vehicles In Indonesia, Yasa Sanusi, Fatwa Tresna Radityan, Farrah Anis Fazliatul Adnan, Jong Soo Rhee, Dianta Ginting

ASEAN Journal on Science and Technology for Development

The transfer to electric vehicles (EVs) in more and more countries is a response to the increasing problems of climate change and air pollution. Electric cars solve this issue as they have zero emissions. EVs can significantly reduce carbon and air pollution, depending on the charging energy mix. In Indonesia, lithium ferro phosphate and nickel manganese cobalt are among the two most preferred types of batteries for EVs, and both have their advantages. This study evaluates the performance of these batteries in terms of power, range, charging speed, and thermal properties, using a range of battery capacities from 26.7 kWh …

Analysis Of The Sustainability Management Of Coral Reef Ecosystem In The Marine Protected Area Of Wediombo, Gunungkidul, Nabilah L. Rohmah, Rika Harini, Sudrajat Sudrajat

ASEAN Journal on Science and Technology for Development

The Wediombo Coastal Area is a Marine Protected Area (MPA) with highly potential in coral reef ecosystems. According to the Millennium Ecosystem Assessment (MEA), coral reefs play a vital role in supporting human life by providing provisioning, supporting, regulating, and cultural services. However, the utilization of this area as a tourist destination and suboptimal management practices have led to the degradation of its coral reef ecosystems. Efective management strategies for the sustainability of coral reefs can have positive impacts across ecological, economic, social, technological, and institutional dimensions. Therefore, this study aims to analyze the sustainability management of coral reef ecosystem …

Potential Of Green Synthesis Of Silver And Gold Nanoparticles For The Management Of Metabolic Associated Steatotic Liver Disease: A Mini Review, Atiqah Suhaili, Ya Chee Lim, Mei Ann Lim, Lee Hoon Lim, Mohammad Mansoob Khan, Monowarul Mobin Siddique

ASEAN Journal on Science and Technology for Development

Metabolic-associated steatotic liver disease is a metabolic disorder with limited pharmacological treatment options and only one approved medication to date. MASLD can be asymptomatic in its earlier stage and hence, prevention of this disease progression is the most effective approach. Recently, green-synthesized nanoparticles, particularly silver (AgNPs) and gold nanoparticles (AuNPs), have gained interest due to their eco-friendly production, biocompatibility, and bioactive properties. This review highlights the biosynthesis of AgNPs and AuNPs using medicinal plant extracts and their reported biological effects relevant to MASLD management including anti-hyperlipidemic, anti-diabetic, antioxidant and anti-inflammatory activities. While findings are promising, further mechanistic studies and preclinical …

Artificial Intelligence To Transform Lifelong Learning And Workforce Development In Southeast Asia: A Call To Action, Shyh Poh Teo, Khadizah H. Abdul-Mumin

ASEAN Journal on Science and Technology for Development

No abstract for this article type.

Macro-Ergonomic And Organizational Behavior Mapping For Organic Waste Management Using Hofstede Culture In Semarang, Indonesia : Pca & Sem Analysis Using Smart Pls, Ratih Setyaningrum, Sahana Pramukti, Ravindran Balasubramani

ASEAN Journal on Science and Technology for Development

Waste management has a very close and complex relationship with community behavior and culture . This relationship is two-way: community culture influences how waste is managed, and conversely, waste management practices can shape or change culture. This study to assess the organizational behavior related to organic waste management. Employing a quantitative methodology, data were gathered using the Hofstede Values Survey Module 13 (VSM 13) - closed questionnaire, with 109 Semarang city Community participants responding via a Google Form. The collected data were analyzed utilizing Hofstede's prescribed formula. The next stage is PCA (Principal Component Analysis) and SEM (Structural Equation Modeling) …

A Pyrrole Modified 3,4-Propylenedioxythiophene Conjugated Polymer As Hole Transport Layer For Efficient And Stable Perovskite Solar Cells, Yuanhao Tang, Ke Ma, Wenhao Shao, Yoon Ho Lee, Ashkan Abtahi, Jiaonan Sun, Hanjun Yang, Aidan H. Coffey, Harindi R. Atapattu, Mustafa Ahmed, Qixuan Hu, Wenzhan Xu, Raunak Dani, Limei Wang, Chenhui Zhu, Kenneth R. Graham, Jianguo Mei, Letian Dou

Chemical and Materials Engineering Faculty Publications

Despite the outstanding electric properties and cost-effectiveness of poly- (3,4-ethylenedioxythiophene) (PEDOT) and its derivatives, their performance as hole transport layer (HTL) materials in conventional perovskite solar cells (PSCs) has lagged behind that of widely used spirobifluorene-based molecules or poly(triaryl amine). This gap is mainly from their poor solubility and energy alignment mismatch. In this work, the design and synthesis of a pyrrole-modified HTL (PPr) based on 3,4-propylenedioxythiophene (ProDOT) are presented for efficient and stable PSCs. As a result of the superior defects passivation ability, excellent contact with perovskite, enhanced hole extraction, and high hydrophobicity, the unencapsulated PPr-based PSCs showed the …

Editorial: A Decade Of Apasti – Advancing Regional Prosperity Through Science, Technology And Innovation, Basilios Tsikouras

ASEAN Journal on Science and Technology for Development

A decade after its establishment, APASTI has emerged as a key regional mechanism for promoting science, technology and innovation as drivers of sustainable development, resilience, and shared prosperity in Southeast Asia. This editorial highlights the contributions of APASTI to policy alignment, knowledge exchange, research visibility, and collaborative network-building across ASEAN, while also acknowledging ongoing constraints related to governance, capacity, funding disparities, and uneven regional integration. It introduces a special issue of 14 papers published in AJSTD that collectively evaluate the implementation and impact of APASTI across diverse sectors, including geohazards, energy, materials, health, infrastructure, transport, and information systems. By positioning …

Inactivation Of Zika Virus With Hydroxypropyl-Beta-Cyclodextrin, Cory R. Hewitt, Nicholas J. Wixon, Arthur Gallegos, You Zhou, Victor C. Huber, M. Scott. Killian

Nebraska Center for Biotechnology: Faculty and Staff Publications

Background/Objectives: Zika virus (ZIKV) infection is associated with life-threatening diseases in humans. To date, there are no available FDA-approved therapies or vaccines for the specific treatment or prevention of ZIKV infection. Variation in the ZIKV envelope protein (Env), along with its complex quaternary structure, presents challenges to synthetic approaches for developing an effective vaccine and broadly neutralizing antibodies (bnAbs). We hypothesized that beta-cyclodextrin (BCD) could be used to uniquely inactivate infectious ZIKV without disruption of Env.

Methods: ZIKV was propagated in Vero cells and admixed with BCD. The BCD-treated ZIKV was evaluated for infectivity using immunofluorescence and quantitative …

Microscopic Analysis Of Temperature Effects On Surface Colonization And Biofilm Morphology Of Salmonella Enterica, Zachariah Vice, You Zhou, Sapna Chitlapilly Dass, Rong Wang

Nebraska Center for Biotechnology: Faculty and Staff Publications

Salmonella enterica represents a diverse group of pathogens commonly associated with food contamination including red meat. Even though pre- and post-harvest cleaning and sanitization procedures are widely implemented at meat processing plants to mitigate the hazard, S. enterica cells may escape the process by colonizing, on contact, surfaces in the form of a biofilm that functions as an aggregated microbial community to facilitate mutual protection, antimicrobial resistance, proliferation and dissemination. Biofilm development is a complex process that can be affected by a variety of factors including environmental temperature. We developed methods using scanning electron microscopy and confocal microscopy with a …

Characterization Of Multispecies Microbial Communities At Beef And Pork Processing Plants And Their Impact On Pathogen Stress Tolerance, Rong Wang, Sapna Chitlapilly Dass, Vignesh Palanisamy, You Zhou, Tatum Katz, Joseph M. Bosilevac

Nebraska Center for Biotechnology: Faculty and Staff Publications

Escherichia coli O157:H7 and Salmonella enterica are major foodborne pathogens. Biofilm formation may potentially contribute to product contamination by these pathogens at meat processing facilities. Further, pathogen stress tolerance may vary significantly due to the interactions with the multispecies microbial community at meat plants, which may be affected by processing activity, animal species, and the local selective pressure caused by sanitization practices.

We characterized natural microorganisms collected from floor drains at various areas at three beef plants and two pork plants and analyzed their impact on pathogen sanitizer tolerance.

The pathogen strains were able to integrate efficiently into the multispecies …

The Influence Of The Digital Economy On The Ecological Environment And Its Sustainable Development, Xinpan Lyu, Jianhua Dai

ASEAN Journal on Science and Technology for Development

This study aims to examine the impact of the digital economy on ecological sustainability and its development in China from 2000 to 2022. The study focuses on the role of innovation in the digital sector, where the adoption of big data technologies is considered, with reference to sustainable development, from an environmental perspective. A dynamic threshold model and, in particular, the Iterated Generalized Least Squares (IGLS) technique is used to analyze the given data.The research reveals a significant link between adopting digital technologies and managing environmental sustainability efficiently. To investigate the interconnection between the digital economy and ecological goals, it …

Multimodal Imaging Of Protein-Based Biomaterials For Delivering Chemo-Agent Cargo For Glioblastoma Treatment In A Murine Model, Orin Mishkit

Dissertations and Theses

Protein-based self-assembling biomaterials, known as Thermo-Responsive Assembled Proteins (TRAP), present meaningful potential as drug delivery carriers. These materials enable the controlled, slow release of poorly soluble chemotherapeutic agents, such as doxorubicin (Dox), while potentially reducing systemic off-target effects. In collaboration with multiple NYU labs, this study evaluated the efficacy of two TRAP variants—TRAP and F-TRAP—as drug delivery carriers in a xenograft mouse model of glioblastoma multiforme (GBM).

The primary objective was to compare the effectiveness of TRAP-loaded Dox (TRAP-DOX) to free Dox in achieving tumor extravasation and accumulation, facilitating sustained drug release. We hypothesized that the leaky vasculature of GBM …

Explorations Of Dna-Single-Walled Carbon Nanotube Interactions To Develop Multiplexed Molecularly Specific Biosensors For Inflammation, Amelia K. Ryan

Dissertations and Theses

Inflammatory cytokines such as interleukin-6 (IL-6) and interleukin-12 (IL-12) are central regulators of immune signaling and key biomarkers of disease, yet existing assays for their detection remain slow, invasive, and lack multiplexing ability. This dissertation advances the development of single-walled carbon nanotube (SWCNT) optical nanosensors capable of real-time, multiplexed, and molecularly specific cytokine detection through innovative use of single-stranded DNA (ssDNA) interfaces.

First, an IL-6-specific DNA aptamer was employed as both a dispersing agent and recognition probe for SWCNT fluorescence sensing. Sequence modifications, including anchor domains, truncations, and thermally induced refolding, were systematically tested to optimize sensitivity and selectivity. The …

Evaluation Of The Dnazyme Gr5 For The Determination Of Lead Speciation In Natural Waters, Gaganprit Gill

Theses and Dissertations (Comprehensive)

This thesis explores the development and application of a DNAzyme-based biosensor designed to detect labile metal species in environmental samples. Real time and on-site monitoring of labile metal fractions would make a valuable contribution to environmental management, as these fractions are the most bioavailable and pose significant toxicity risks to aquatic organisms. Conventional methods for detecting labile metals, while effective, are often burdened by high costs, complexity, and lengthy processing times, making them less ideal for rapid and widespread environmental assessments.

The first manuscript of this thesis (chapter 2) establishes the fundamental capabilities of the Pb²⁺-specific DNAzyme GR5 …

Impact Of Color, Shape, And Typeface On Visual Attention: An Eye Tracking Study On Brand Logo, Suzayana Rosidah, Fransiskus Xaverius Ivan, Suatmi Murnani, Hafzatin Nurlatifa, Kristian Adi Nugraha, Sunu Wibirama

ASEAN Journal on Science and Technology for Development

In numerous cases, companies undertake logo redesigns to enhance brand perception. However, little attention has been paid to the impact of each element of the redesigned logo on visual attention and brand perception. To address this research gap, we collected data from eye tracking and self-report questionnaires of 30 participants during exposure to the old and new logos of a prominent bookstore in Indonesia. The results of the questionnaires revealed a significant relationship between the responses concerning color, shape, typeface, and those pertaining to visual attention (p < 0.05). Most participants were able to grasp the value of creativity, flexibility, progress, change, and strength in the new logo shape. The results of eye tracking show that color was the most influential factor that attracted visual attention in old (F(1.5, 43.4) = 14.905, p < 0.05) and new logos (F(1.7, 50) = 34.757, p < 0.05). This study suggests that companies should selectively choose a color scheme of a logo that better attracts the attention of consumers. In addition, our finding is promising as a practical guide for similar research, as well as a case study on how logo redesign affects brand perception and visual attention.

Minimizing Cpu Utilization For Job Scheduling Problems By The Advanced Round Robin Method: A Pragmatic Perspective, Haribhau R Bhapkar, Pankaj R Chandre, Parikshit Mahalle

ASEAN Journal on Science and Technology for Development

CPU scheduling issues include minimizing waiting time for processes, ensuring fairness in resource allocation, and optimizing throughput. Balancing these objectives can be challenging, as improving one aspect may negatively impact another, making it essential to design efficient scheduling algorithms. This work presents an innovative approach to enhance CPU utilization through the development of a Result-Based Round Robin Scheduling Algorithm. Traditional Round Robin Scheduling methods often face challenges in efficiently allocating CPU time, leading to suboptimal system performance. In response to these limitations, the proposed method introduces a result-oriented strategy that dynamically adjusts time quantum allocations based on the execution progress …

Regulation Of Haemodynamic Variables By Laguerre Polynomials Based Model Predictive Control., Sai Sandeep Boda, Hiren Kumar G. Patel, Khyati D. Mistry

ASEAN Journal on Science and Technology for Development

Purpose: Cardiac output (CO) and Mean Arterial Pressure (MAP) are two haemodynamic variables that need regulation in clinical situations, particularly in post-cardiac surgery patients. As it is difficult for clinical personnel to monitor continuously, automatic drug infusion to regulate MAP and CO is recommended and essential in the medical environment. Methods: Two input and two output patient model was used in this work to study the variation of haemodynamic variables in response to the infusion of Dopamine (DP) and Sodium Nitroprusside (SNP) drugs. Model predictive control (MPC) algorithm was exercised here as it was a well-established technique to regulate output …

From Theory To Practice: Simulating Zero Trust Architecture With Python For Cybersecurity, Pankaj R. Chandre, Bhagyashree D. Shendkar, Sulochana Sagar Madachane, Nikita Kulkarni, Sayalee Deshmukh

ASEAN Journal on Science and Technology for Development

The increasing complexity and frequency of cyber threats have necessitated the adoption of advanced security models, such as Zero Trust Architecture (ZTA). ZTA runs on the tenet that no entity whether inside or outside the network should be trusted by default, in contrast to conventional perimeter-based security solutions. This paper describes a thorough method for simulating and implementing Zero Trust Architecture in Python. We examine the essential elements and procedures of ZTA, such as identity verification, access control, and continuous monitoring, through a thorough analysis and step-by-step manual. The simulation shows how ZTA works to ensure strong network security and …

Distance Metric Learning Techniques For The Performance Improvement Of Ml-Knn And Ranking-Svm-Based Multi-Label Pattern Classification, Shajee Mohan B. S., Sneha S Mohan

ASEAN Journal on Science and Technology for Development

A multi-label pattern classification system tries to predict the set of class labels of a test example by learning from the training examples with the relevant label sets. Classification that involve datasets having multiple labels found immense of applications in pattern analysis tasks involving image, music and video. A test sample can be labeled to indicate different objects, people, music categories or concepts. Classification problems involving data having multiple labels, have to consider training dataset associated with variety of labels. Multi-label extensions of popular algorithms, kNN and Support Vector Machine (SVM) called Multi-label kNN (ML-kNN) and Ranking-SVM are commonly used …

Solid Waste Management Strategies In Coastal Areas Affected By Seawater Flood Disaster, Adib Khoirul Anas, Maryono Maryono, Hartuti Purnaweni

ASEAN Journal on Science and Technology for Development

Solid waste in areas affected by seawater floods must be handled specifically because people often dispose of solid waste on flooded land. This research aims to identify the performance of the community to manage solid waste and solid waste management strategy, solid waste measurement using SNI method 19-3964-1994. Analysis of land affected by seawater floods shows that 12 villages are flooded. Communities in coastal areas are not optimal in managing solid waste because the government has never given directions to manage solid waste in a good way, the facilities and marketing are inadequate so that solid waste is often not …

Neuro-Symbolic Ai: A Future Of Tomorrow, Pankaj Chandre, Parikshit Mahalle, Gitanjali Shinde, Bhagyashree Shendkar, Shraddha Kashid

ASEAN Journal on Science and Technology for Development

Neuro-Symbolic AI: A Future of Tomorrow" explores the convergence of neural learning and symbolic reasoning to advance artificial intelligence (AI) systems. Symbolic reasoning makes use of knowledge representation techniques and rule-based systems, whereas neural learning analyzes data using deep learning models. AI becomes more adept at fusing data-driven insights with deductive reasoning when these methods are integrated using hybrid models and differentiable reasoning techniques. Applications show enhanced diagnostic precision and decision-making skills in a variety of industries, including robotics, healthcare, and finance. To promote responsible AI development, regulatory frameworks and ethical principles address issues like bias and transparency. Future paths …

Exploring Dynamics And Effective Strategies For Tidal Flood Risk Reduction In Indonesia's Coastal Cities, Satria Yudha Adhitama, Diana Puspitasari, Lucia Sandra Budiman, Azis Musthofa

ASEAN Journal on Science and Technology for Development

Indonesia’s coastal regions have distinct charateristics. However, nearly all of these coastal regions are vulnerable to tidal floods. The purpose of this study is to determine the features of coastal regions in Indonesia that have been damaged by tidal floods, as well as the actions implemented to mitigate disaster risk. Thus study takes a qualitiative method with explanatory analysis. The Island Spatial Planning is used to classify Indonesia’s archipelagic regions.An urban area vulnerable to tidal flood was selected from each archipelagic region. The characteristics of coastal regions affected by tidal flood were identified by the tidal flood characteristics, coastal physiography. …

Wind Speed Forecasting: A Comparative Study Of Decomposition Techniques, Manisha Galphade, V.B. Nikam, Nilkamal More, Biplab Banerjee, Arvind W. Kiwelekar, Priyanka Sharma

ASEAN Journal on Science and Technology for Development

Renewable energy is sourced from natural resources that are continually available. Wind energy is a main category of renewable energy, which largely depends on wind speed. Accurate wind speed forecasting is essential for incorporating renewable energy into the electrical grid. Moreover, it is crucial to ensure the safety of wind turbines by anticipating extreme weather conditions and implementing necessary precautions. Predicting wind speed presents several challenges because of dynamic and complex nature of atmospheric conditions. Traditional methods for wind speed forecasting, such as statistical models and basic physical approaches, often face limitations in accuracy, flexibility, and handling of complex data …

Improving Ethanol Purity By Methanol Adsorption Using Mcm-41: A Study Of Kinetics And Thermodynamics For Industrial Applications, Ali A. Yahya, Nisreen S. Ali, Basma B. Hameed, Talib M. Albayati, Issam K. Salih, Riyadh S. Almukhtar, Narges Elmi Fard

ASEAN Journal on Science and Technology for Development

One of the by-products of the fermentation process that produces ethanol, which is mostly utilized in industry and food, is methanol. For methanol adsorption in batch operations, mixed amines modified (MCM-41) was utilized. A batch adsorption technique loaded with MCM-41 sorbent was used in the study to separate methanol from ethanol. This study used methanol at varying initial concentrations (40-80 mg/L). As a result, the effect of temperature, duration of adsorption, amount of adsorbent and initial concentration of pollutant in the field of ethanol alcohol purification using MCM-41 was investigated through the adsorption mechanism. In addition, first and pseudo-second order …