Biology Commons^™

Prooxidant Effect Of Uric Acid On Human Leukocytic Dna: An In Vitro And Ex Vivo Study, Yim Tong Savio Szeto, Vincy Sze Wing Li, Yuen Lam Pon

Turkish Journal of Biology

Background/aim: Uric acid is a major contributor to the total antioxidant capacity of human plasma. However, this endogenous substance’s antioxidant and prooxidant properties have not yet been reported.

Conclusion: In this study, the comet assay was employed in vitro to determine the effect of uric acid on DNA damage in human lymphocytes and leukocytic DNA damage in hyperuricemia patients with and without renal failure.

Results: DNA damage in lymphocytes occurred at uric acid concentrations of ≥600 μM. Adding catalase to the uric acid solution diminished the damaging effect, indicating that hydrogen peroxide mediated the prooxidant activity. Moreover, …

Intrinsic Apoptotic Effect Of Anatolian Honeybee (Apis Mellifera Anatoliaca) Venom Promoted With Mesoporous Silica Nanocarriers, Batuhan Orman, Ayli̇n Koç, Di̇dem Şen Karaman, Ayşe Nalbantsoy

Turkish Journal of Biology

Background/aim: The use of bee products or treatment with bees, as a complement to conventional medicine is attracting considerable attention in cancer research. Although discoveries related to the potential anticancer effects of bee venom are increasing, the unstable nature of venom biomolecules remains a limiting factor for their usage. In this study, we employed mesoporous silica nanocarriers (MSNs) to provide precise dosing and prevent carriers from biomolecule degradation thanks to the outstanding loading capacity provided by the pores, excellent chemical and biological robustness, and ability to improve bioavailability.

Materials and methods: MSNs were synthesized and physicochemical characterizations were …

Resveratrol Modulates Triosephosphate Isomerase And Mineralization In Osteosarcoma Cells: Potential Target For Novel Therapeutic Strategies, Gonca Tuna, Si̇bel Çinar Asa, Eli̇f Ertürk, Yaren Yildiz, Ferda Ari

Turkish Journal of Biology

Background/aim: Osteosarcoma, a primary malignant bone tumor, is challenging to treat due to its aggressive nature and limited therapies. Resveratrol (RES), a natural polyphenol, has potential anticancer properties. Hence, we investigated RES’s impact on osteosarcoma cells, focusing on triosephosphate isomerase (TPI) and related mechanisms.

Materials and methods: RES was applied to osteosarcoma (SaOS-2) and healthy fetal osteoblast (hFOB 1.19) cells for 48 h, and cell viability was measured by SRB assay. The mode of cell death was examined using Hoechst 33342/annexin V/propidium iodide. TPI and methylglyoxal (MG) enzyme levels were determined by ELISA. The effect of RES on …

N-Cadherin Mimetic Hydrogels Drive Superior Regenerative And Paracrine Responses In 3d Cultures Of Adipose-Derived Mesenchymal Stem Cells, Demet Kaçaroğlu, Alper Murat Ulaşli, Aybüke Di̇denur Sak, Seher Yaylaci

Turkish Journal of Biology

Background: Cadherin-based biomaterials play a pivotal role in influencing the fate of mesenchymal stem cells (MSC). Enhancing the adhesion of adipose tissue-derived MSCs has been shown to augment their paracrine effects while N-cadherin biomaterials have been suggested to regulate the paracrine effects of MSCs via specific growth factors although the precise mechanisms underlying this regulation remain insufficiently understood. This study aims to compare the effects of a 3D N-cadherin mimetic environment on cell viability, apoptosis, extracellular matrix regulation, and growth factor expression with those observed in traditional 2D and 3D spheroid cultures. Additionally, the study seeks to evaluate the …

Knockdown Of Plexin C1 Induces Epithelial-To-Mesenchymal Transition And Confers Resistance To Multikinase Inhibitors In Hepatocellular Carcinoma Cells, Gamze Güngör Topcu, Arzu Aysan, Şevval Di̇k, Mai̇de Şeker, Meli̇ke Bi̇nnur Bahçekapili, Sude Topkaraoğlu, Di̇lek Yavuzer, Tamer Yağci

Turkish Journal of Biology

Background/aim: HCC is a common and lethal malignancy and multi-kinase inhibitors (MKIs) are among the therapeutic options for unresectable cases. However, response rates to MKIs remained variable, necessitating the identification of predictive biomarkers. Plexin C1 (PLXNC1), a receptor involved in cell signaling, has emerged as a potential candidate to regulate tumor responses. This study aims to evaluate the impact of PLXNC1 expression on the sensitivity of HCC cells to MKI therapy.

Materials and methods: shRNA-mediated PLXNC1 knock-down and control clones of HCC cell lines PLC/PRF/5 and Hep3B were generated, and downregulation of PLXNC1 was confirmed using Western blotting. …

Diapause And Anoxia-Induced Quiescence Are Unique States In Embryos Of The Annual Killifish, Austrofundulus Limnaeus, Patrick R. Clouser, Claire L. Riggs, Amie L. T. Romney, Jason E. Podrabsky

Biology Faculty Publications and Presentations

Diapause is a state of developmental and metabolic dormancy that precedes exposure to environmental stresses. Yet, diapausing embryos are typically stress-tolerant. Evidence suggests that diapausing embryos “prepare” for stress as part of a gene expression program as they enter dormancy. Here, we investigate if diapause II embryos of the annual killifish Austrofundulus limnaeus, which can survive for hundreds of days of anoxia, can mount a transcriptomic response to anoxic insult. Bulk RNAseq was used to characterize the transcriptomes of diapause II embryos exposed to normoxia, 4 h and 24 h anoxia, and 2 h and 24 h normoxic recovery …

Identification Of Areas Of Weakness In Forensic Footwear Research, Kathryn Roy

Honors Projects

Forensic footwear examinations have been carried out for almost a century, but the foundational validity of identifying a questioned impression to a particular shoe has been questioned by the National Research Council and the President’s Council of Advisors on Science and Technology. The focus of this paper was to identify the current weaknesses present in forensic footwear impression research. Additionally, a future experiment was proposed to address these concerns and improve the foundational validity of footwear impression comparisons. A total of 15 footwear research studies varying in methodology and content were analyzed and contrasted. From this, a lack of studies …

Comparison Of Morphological Characteristics And Dna Sequences Of Platyhelminthes Within Dabbling And Diving Ducks Species, Elise A. Betcher, Karolyn M. Kolstad, Ashley L. Marks, Marguerite C. Reitano, Alexander J. Train

Research & Creative Achievement Day

Platyhelminthes, also known as flatworms, are among the most common parasites found in North American duck species. This phylum of parasites includes tapeworms and flukes. This study focused on identifying various Platyhelminthes found in Minnesota and Wisconsin wild ducks using both morphological characteristics and genetic sequencing. Both diving and dabbling species of ducks were used for this study, including green winged-teal (Anas carolinensis) and ring-necked ducks (Aythya collaris). Platyhelminthes were removed from legally harvested ducks and stained before examining and imaging under the microscope to identify key morphologic features for a presumptive identification. Subsequently, DNA was extracted …

Development Of A Qpcr For Detecting Borrelia Burgdorferi And Ixodes Tick Dna Simultaneously, Jenna Junker, Anthony J. Appicelli

Research & Creative Achievement Day

Black-legged ticks (Ixodes scapularis) and Lyme disease, caused by the bacterium Borrelia burgdorferi, are prevalent in the upper Midwest. Accurate determination of the percentage of Ixodes ticks that carry Lyme disease could help physicians and health experts develop treatment and prevention plans to curb the prevalence of disease. The purpose of this study was to see if accurate results for both Ixodes DNA and Borrelia DNA could be analyzed in the same qPCR assay for faster Lyme disease testing. Current testing in humans is achieved by running two separate diagnostic assays, an ELISA and Western Blot, both …

A Comparison Of The Bacterial Communities Of The Yamuna River (India) And Mississippi River (Usa), Jacob Gareis, Osvaldo Martinez, Silas Bergen

Research & Creative Achievement Day

This study compared the bacteria in the Yamuna River in India and the Mississippi River in the USA. Water samples were taken from 11 sites (2 in the Mississippi River and 9 in the Yamuna River). The bacteria were identified using 16S rRNA gene sequencing. Some phyla such as Proteobacteria and Bacteroidetes were seen in abundance regardless of country. However, principal-component analysis showed three distinct groupings: Mississippi/Ganga/Tons and other Yamuna River locations (7 sites), Yamuna River at Delhi (2 sites), Yamuna River below Glacier (2 sites) Additionally, the Yamuna River below Glacier had the highest bacterial diversity, with a Shannon …

The Economic Impact Of The Emerald Ash Borer In Inver Grove Heights Mn, Nicholas Ruch, Noah Anderson

Research & Creative Achievement Day

Emerald Ash Borer (EAB) is an insect that bores under the ash tree's bark. This effectively kills the tree by girdling its cambium. In this analysis of EAB, we looked at the financial effect it had on Inver Grove Heights, Minnesota. Expert Tree Service removed most of their ash trees and provided us with data to help calculate how much it cost. Brian Swoboda, the head forester for Inver Grove Heights, provided us with all of the information about their plan to reforest.

In total, for the years 2022 and 2023, the removals done by Expert Tree Service cost $83,690.68 …

Classification Of Trematode Species Of Wisconsin Ducks Using Morphological And Molecular Methods, Athena B. Lueken, Isabella T. Xiong, William J. Harvey

Research & Creative Achievement Day

Trematoda is a class of flatworms and it encompasses approximately 20,000 species. Trematoda has two subclasses, Digenea and Aspedogastria. The families observed in this study were Echinostomatidae and Strigeidae from the subclass Digenea. Trematoda can be found in most species of animals, usually ingested from their food source. The Trematodes in this study were collected from three different duck species including Aythya affinis (Lesser Scaup,) Anas acuta (Pintail,) and Aix sponsa (Wood Duck) donated by hunters between 2023 and 2024. All ducks were harvested in the state of Wisconsin and the dissections were performed at Winona State University, Winona Minnesota. …

2025 Acssc Program, Acssc Planning Committee

Annual Celebration for Student Scholarship and Creativity

No abstract provided.

The Significance Of Symmetry: Exploring T-Numbers And Their Role In Virus Survival And Behavior, Jenna Franco, Taylor Ligozio

Mathematics & Computer Science Student Scholarship

Jenna Franco ’25, Biology major

Taylor Ligozio ’25, Biology major

Faculty mentor: Dr. Su Jeong Kang, Mathematics and Computer Science

We studied the symmetry of different structures in common viruses and their T-numbers. We related these T-numbers with characteristics of the virus. Next we researched how the T-number of each virus was optimal for its survival and reproduction in its environment. We can use this information to infer or predict the behavior of viruses in the future based on their T-numbers.

Demography And Habitat Associations Of The Basalt Cactus Pediocactus Nigrispinus, Zarha S. Dillon-Zuppelli, Mary E. Poulson, Eric A. Graham

Biology Faculty Scholarship

Cacti are iconic members of arid ecosystems. Pediocactus nigrispinus is a species of cactus endemic to the Pacific Northwest and has been listed as a sensitive species due to its vulnerability to habitat loss. Best conservation methods for this species are poorly understood, due in part to a limited understanding of its demography and habitat associations that may help define its occurrence. A demographic study from four plots in Washington State was implemented in 2016 to provide a baseline of the population dynamics for P. nigrispinus and to enhance conservation efforts for this sensitive species. Five years of size, fecundity, …

Food & Drugs Unite: Targeting Leukemia With A [6]-Gingerol And 5-Fluorouracil Combination Chemotherapy, Alexa Mazzeo, Samantha Wechsler

Biology Presentations

Leukemia is a cancer found in the blood characterized by rapid growth of blood cells. This study examines the effect of [6]-Gingerol and 5- Fluorouracil (5-FU) on the proliferation of the Jurkat cell line, a cell line that is a model for T-cell leukemia due to similar mechanisms. MTT assay technique was used to measure cell proliferation and viability. We expected to see high cell fractional affect and reduced proliferation as the concentrations of the combinational therapy of [6]-Gingerol and 5-FU increased. These two cell compounds were selected because of their anti-carcinogenic effects: [6]-Gingerol is used aid in the inflammation …

Development Of Edna Tools For Biomonitoring, Stella Grondin, Anthony Aldana – Mendez

Biology Student Scholarship

Stella Grondin ’27, Biology major

Anthony Aldana – Mendez ’27, Biology and Psychology major

Faculty mentor: Dr. Jeffrey Markert, Biology

Effects Of Integrated Pest Management On Honey Bee Behavior And Colony Level Health, Kaitlyn Bresnahan

Biology Student Scholarship

Kaitlyn Bresnahan ’25, Biology major

Faculty mentor: Dr. Rachael Bonoan, Biology

Honey bees face threats from many directions, but the most pressing is the parasitic mite Varroa destructor. One popular method of combatting Varroa is adding drone comb which forces the colony to raise larger, mite-preferred male bees. While this method reduces mite numbers, it may add unnecessary colony-level stress. My research investigates how forcing the hive to raise drones for mite management affects honey bee population growth and foraging behavior. This was accomplished by estimating adult bee population and area of drone brood, and by examining foraging behavior of …

Quantifying The Relationship Between Biomass And Edna​, Andrew K. Hogan

Biology Student Scholarship

Andrew K. Hogan ’27, Environmental Biology and English Literature major

Faculty mentor: Dr. Jeffrey Markert, Biology

In this project, we compared eDNA concentration in water to the biomass of present creatures and the time the eDNA in each sample took to decay. With this data, standard curves for both variables can be created and can be used for future experiments and field research. This data will give researchers a greater level of understanding about what animal populations might look like based on the eDNA obtained.

Effects Of Hyperglycemia In Cognition And Sex, Erin E. Mcdonald

Senior Honors Theses

An empirical study tested the effects of Type 1 Diabetes (T1D) on cognitive function in a hyperglycemic mouse model. Strong correlations between mental illnesses, such as major depressive disorder, neuropathologies like Alzheimer’s disease, and diabetes suggest comorbid pathology. Considering the prevalence of both T1D and cognitive decline within the general population, the findings were relevant and aimed to identify early signs of cognitive decline in diabetic patients. Behavioral tests and immunohistochemical staining were utilized to determine the cognitive function of the mice, revealing decline or deterioration caused by hyperglycemia. Data gathered from the hyperglycemic or control mice were analyzed based …

Volume 16, Maggie Duncan, Madeline Little, Alicia Hoffman, Megan Livesay, Gabrielle Quaresma, Serenity Allen, Laina Pfountz, Ainslie Allred, Sabrina Robles, Nicholas J. Duellman, Trinity L. Deguzman, Melissa H. Savage, Margaret Dudley, Jocelyn Escobar, Olivia Hildreth, Olivia Hopkins, Benjamin Gettier, Lee Kassay, Jade Riddle, Ashley Seiders

Incite: The Journal of Undergraduate Scholarship

Introduction Dr. Amorette Barber, Director, Office of Student Research

From the Editor Dr. Hannah Dudley-Shotwell

Artist’s Statement Maggie Duncan

On Mentoring Dr. Lee Millar Bidwell

The Hujum Campaign in Uzbekistan and its Consequences by Madeline Little

Wet Cupping Compared to Dry Needling for Treatment of Patients with Low Back Pain: A Critically Appraised Topic by Alicia Hoffman and Megan Livesay

Optimization of eDNA Air Sampling Via 3D Printed Fan by Gabrielle Quaresma

Beyond the Classroom: A Qualitative Study of Teacher Attrition and Retention by Serenity Allen and Laina Pfountz

The Treatment of Subacromial Impingement Syndrome with Platelet-Rich plasma Injections Verses …

Anxiety- And Compulsivity-Linked Differences In Reinforcement Learning In A Choose-Your-Own-Adventure Game, Tessa Medeiros

Neuroscience Program Student Scholarship

Tessa Medeiros ’26, Biology & Psychology major

Faculty mentor: Dr. Andra Geana, Psychology and Neuroscience

Reinforcement learning (RL) mathematically describes how agents learn to maximize the reward of their environment by understanding and comparing their choice options. This project investigates how anxiety and compulsivity impact the selection of these options and to what extent a text-based, narrative (rather than a game-like environment) changes RL processes in humans.

Using Enviromental Dna To Detect And Quantify Atlantic Silversides In Rhode Island, Owen Finnegan

Biology Student Scholarship

Owen Finnegan ’25, Environmental Biology major

Faculty mentor: Dr. Jeffrey Markert, Biology

Here we test whether eDNA concentrations consistently reflect the abundance of fish in a given area. We compare physical catches to the levels of eDNA in the water using quantitative PCR (qPCR) at three sites in Rhode Island. A native and plentiful species like Atlantic Silversides is the perfect organism to for calibrating our methods as recorded catches of Atlantic Silversides from our collections range from 0-1500+ individuals.

The Effect Of Salinity On Mangrove Growth In The Florida Everglades, Olivia Macaluso

Biology Student Scholarship

Mangrove forests are highly productive ecosystems that provide benefits to humans, such as storm protection, in the intertidal regions of tropic and subtropic climates. Mangroves grow primarily in shallow brackish water where fresh and salty water sources meet, but frequent hurricanes mean that once stable brackish environments are vulnerable to fluctuations in salinity levels. A previous study on the effect of salinity on mangroves found a negative relationship between salinity increase and root biomass growth. However, little research has gone into the effects of salinity changes on mangrove growth and productivity. Here, I used data from the Wetland and Aquatic …

Environmental Racism In Ri: The Presence Of Toxic Waste Sites In Low Income And Minority Communities (19), Julienne Walsh

Biology Student Scholarship

Environmental racism refers to the disproportionate impact of environmental hazards on communities of color and low-income populations. Across the U.S., studies have shown that polluting facilities are more likely to be in or around communities with higher percentages of non-white residents or lower socioeconomic status. Scholarship regarding these patterns in small states like Rhode Island is relatively limited. By analyzing how these sites are spatially distributed in relation to racial and economic demographics, this research aims to contribute to a deeper understanding of local environmental inequities. I hypothesize that if you live in a low-income or more diverse town, national …

Microneedles Potentiate Skin Cell Rejuvenation Via Modulation Of Mitochondria And Epigenetic Activities, Alexandra Delano, Angelika Kartsagoulis

Biology Student Scholarship

Alexandra Delano ’25, Biology major

Angelika Kartsagoulis ’25, Biology major

Faculty Mentor: Dr. Yinsheng Wan, Biology

Characterizing The Functional Diversity Of Southern Ocean Chordates, Lillian Stern

Biology Student Scholarship

Lillian Stern ’26, Biology major

Faculty mentor: Dr. Roxanne Banker, Biology

Biological invasions are… Invasion events can alter ecosystem properties like species interactions, trophic rank, and abundance. Current scientific research struggles to quantify the effects of biotic invasions effect on ecosystem structure and function. Measuring functional diversity, or the diversity traits such as feeding and living habits, in an ecosystem can provide important information about how organisms and the environment respond to environmental change. Here, we investigate functional diversity of the Chordates in a marine Southern Ocean community that has already been affected by biological invasion. By characterizing how these …

Examining The Effects Of Symbiotic State And Environmental Pollution On Wound Healing In Coral, Jonathan De Montagnac

College Honors Program

Understanding coral reef health requires comprehension of the biological processes that support live coral cover. Corals are frequently exposed to physical abrasion from various sources, thereby necessitating vital resources be directed towards wound recovery. For corals and other organisms that harbor photosynthetic symbionts, the balance between autotrophic versus heterotrophic energy contributions influences their fitness. Experimentally disentangling the individual effects of environmental stress and symbiotic state on coral health is difficult in most tropical corals due to the obligate nature of their symbiosis. However, determining how nutritional dynamics, environmental stressors, and health interact is crucial to understanding coral resilience. To examine …

Diversity And Habitat Use Of Bats In Modified Suburban Landscapes, Brittany Morgera

Biology Presentations

Bats occupy critical ecological niches and perform important ecosystem services like controlling insect populations. However, humans have altered bat habitat substantially, resulting in the reduction of bat populations. The goals of this research are to assess bat diversity and habitat use across different levels of suburban habitat modification. To accomplish this, we deployed passive acoustic recorders at twelve locations with varying human impact in Montgomery County, Pennsylvania. In accordance with The North American Bat Monitoring Program’s standards, acoustic analysis software was used to identify bat species. Manual identification methods from The Canadian Wildlife Health Cooperative were used to verify these …

Dosage-Dependent, Carboplatin And Ng52 Show Synergistic Effect On Inhibiting Cell Proliferation In Breast Cancer Cell Line, Ben Couture, Ryan Zhuge

Biology Presentations

BT-549 (Breast Cancer), a highly invasive epithelial breast cancer cell line, was used to investigate the effects of two drugs: NG52, a selective kinase inhibitor and Carboplatin, a platinum-based DNA-alkylating agent. Using cell counting assays and calculating IC50 values, we examined their combined impact on cell proliferation. Results revealed both an antagonistic and synergistic effect dependent on concentration. Where the individual agents inhibited cell proliferation less effectively than expected. These findings show the complexity of drug interactions and provide insights into optimizing therapeutic strategies for highly invasive cancer types.