Biology Commons^™

Abiotic Conditions Of Rare Pitcher's Thistle Attract Selection By An Invasive Weevil, Monica Paniagua Montoya

Lawrence University Honors Projects

Plant associations occur when host selection of a focal plant is reduced or increased by the presence of another plant species. Larinus planus is an invasive weevil whose larvae feed in the flower heads of native and federally threatened Pitcher’s thistle (Cirsium pitcheri). Studies have linked the presence of neighboring plants to increased host selection of Pitcher’s thistle by the weevil, but the factors contributing to host selection remain unknown. In our study, we determined if there were differences among abiotic factors, host selection and weevil behavior at Pitcher’s thistles surrounded by beach grass, sand and at high …

Understanding The Patterns Of Distribution And Abundance Of Lyme Disease Carrying Ticks And Their Hosts, Julio Ruiz

Honors Theses

Lyme disease is caused by the bacteria Borrelia burgodorferi and spreads to their hosts by the bites of infected Ixodes scapularis ticks. In the United States, Lyme disease is typically found in the northeast but in recent years the disease has begun to be found further south and west than previously before. Yet, today, little information can be found about the patters of distribution and abundance of ticks and their host. The main goal of this research work was to expand the knowledge of the abundance and distribution of ticks and host. Based on tick collection data obtained from Maikis …

Proteomic Profiling Of Vetiver Grass (Chrysopogon Zizanioides) Under 2,4,6-Trinitrotoluene (Tnt) Stress, Padmini Das, Dibyendu Sarkar, Rupali Datta

Michigan Tech Publications, Part 1

Vetiver grass is an ideal plant for 2,4,6-trinitrotoluene (TNT) phytoremediation, due to its ability to tolerate and metabolize TNT as previously reported. The current study is the first attempt to investigate the changes in the proteomic profile of a plant under TNT stress. Vetiver plants were grown in nutrient media with varying concentrations of TNT (0, 25, 50, and 100 mg L−1) for 10 days. Although the plants appeared healthy, significant biomass reductions (p = 0.0008) were observed in treated plants. Total proteins in the root decreased significantly (p = 0.0003). Proteomic analysis of root proteins revealed the downregulation of …

Fibroblast Reticular Cells Engineer A Blastema Extracellular Network During Digit Tip Regeneration In Mice, Luis Marrero, Jennifer Simkin, Mimi Sammarco, Ken Muneoka

Biology Faculty Publications

The regeneration blastema which forms following amputation of the mouse digit tip is composed of undifferentiated cells bound together by an organized network of fibers. A monoclonal antibody (ER‐TR7) that identifies extracellular matrix (ECM) fibers produced by fibroblast reticular cells during lymphoid organogenesis was used to characterize the ECM of the digit, the blastema, and the regenerate. Digit fibroblast reticular cells produce an ER‐TR7⁺ ECM network associated with different tissues and represent a subset of loose connective tissue fibroblasts. During blastema formation there is an upregulation of matrix production that returns to its pre‐existing level and anatomical pattern in …

Integrating The Field Of Prebiotic Chemistry Into A Christian Worldview, Matthew B. Anderson

Senior Honors Theses

This thesis will provide an overarching examination into the scientific field of prebiotic chemistry, the purported chemistry of the formation of life on earth. Prebiotic chemistry is a critical area of science particularly for Christian scientists to study since it is used by many evolutionists as evidence for the evolution of life, rather than the formation by an intelligent designer. Extensive literature-based research from previously published articles will be conducted on the formation of biologically necessary molecules, including amino acids. Primary focus will be placed on the formation of amino acids in a primordial earth environment, first demonstrated by the …

Insights Into Stat5 Biology, Taylor Millar

Honors Capstones

No abstract provided.

Characterizing Two Bestrophin Mutants Of Chlamydomonas Reinhardtii, Camille I. Prejean

Honors Capstones

No abstract provided.

Localization Of The Cystic Fibrosis Transmembrane Conductance Regulator In Retinal Amacrine Cells, Jordan Renschler

Honors Capstones

No abstract provided.

Immunohistochemical Comparison Of Retinal Cell Populations In An Aquatic Predator Species And A Terrestrial Prey Species That Share A Common Evolutionary Ancestor, Nikka Khorsandi

Honors Capstones

No abstract provided.

Urban Soils In Response To Flooding, Katherine Henry

Honors Capstones

No abstract provided.

Secrets Of Sines: The Story Of Platy-1 Propagation In The Saimiri Lineage, Sarah Brantley

Honors Capstones

No abstract provided.

Potential Effects Of Tfiiic Binding To The Rad2 Promoter, Margaret Agosta

Honors Capstones

No abstract provided.

Proteomic Analytical Viability Of Ffpe Preserved Tissue Using Laser Ablation- Capture And Tandem Mass Spectrometry (Ms/Ms), Joshua Edwards

Honors Capstones

No abstract provided.

Uncovering Novel Interactions Of The Mec1 Dna Damage Response Protein, Hug1, Ashley Curran

Honors Capstones

No abstract provided.

The Role Of Human Trbp And Pact In Rnai-Mediated Antiviral Immunity And Exogenous Rnai Pathways In Caenorhabditis Elegans, Victoria Lulich

Honors Capstones

No abstract provided.

Lethal Effects Of The Non-Native Invasive Shrub Amur Honeysuckle (Lonicera Maackii) On A Model Aquatic Organism (Hyalella Azteca), Eric B. Borth

Honors Theses

The invasive plant Lonicera maackii (Amur honeysuckle) has had a variety of ecological effects as it continues to spread through the eastern United States including the loss of plant biodiversity and alterations in ecosystem function in forests. Streams meander through many forests where Amur honeysuckle is present and recent evidence suggests that this terrestrial invasion has consequences for stream biology. Leaves of Amur honeysuckle have been shown to have strong negative effects on terrestrial insects and we hypothesized that these negative effects may also occur in aquatic macroinvertebrates. In this set of experiments we used a sequence of microcosm assays …

Effectiveness Of A Novel Porphyrin Exhibiting Dark Toxicity Against The Model Organism Mycobacterium Smegmatis, Marissa C. Jama

Honors Theses

Antimicrobial photodynamic therapy (PDT) utilizing porphyrins has emerged as a possible ancillary treatment against antibiotic resistant bacteria. Porphyrins, such a novel zinc containing porphyrin designated ZnP, create reactive oxygen species that are toxic to bacterial cells utilizing light by a mechanism that is not yet fully understood. Previous experiments have shown ZnP to be able to kill microorganisms in the dark which is unique to few porphyrins. The aim of this research is to understand the effect ZnP has on Mycobacterium smegmatis, a model organism for the pathogenic bacterium Mycobacterium tuburculosis which causes the lung infection tuberculosis. Further experimentation is …

Understanding The Impact Of State & Federal Aid On The Catholic Identity Of Colleges And Universities In New York State, Fernando Ontiveros

Biology Faculty/Staff Publications

There are close to 200 institutions of higher education in the US that claim a Catholic identity. The degrees to which the values and attitudes proclaimed by this identity are actually experienced by students on campus varies widely across the country. One of the defining influences on the institutional history and leadership composition of many colleges and universities founded by religious orders has been the availability of governmental monetary support, in particular during the last five decades. Federal and state laws regarding the use of public funds to support higher education at institutions with a religious affiliation have prompted changes …

Molecular Detection Of Candidatus Bartonella Mayotimonensis In North American Bats, Thomas M. Lilley, Cali Ann Wilson, Riley F. Bernard, Emma V. Wilcox, Eero J. Vesterinen, Quinn Mr Webber, Laura Ann Kurpiers, Jenni M. Prokkola, Imran Ejotre, Allen Kurta, Kenneth A. Field, Deeann M. Reeder, Arto T. Pulliainen

Faculty Journal Articles

Candidatus Bartonella mayotimonensis was detected in 2010 from an aortic valve sample of a patient with endocarditis from Iowa, the United States of America. The environmental source of the potentially new endocarditis-causing Bartonellaremained elusive. We set out to study the prevalence and diversity of bat-associated Bartonella in North America. During 2015, mist nets and harp traps were used to capture 92 bats belonging to two species: little brown myotis (Myotis lucifugusLe Conte 1831, n = 73) and the gray myotis (M. grisescens A.H. Howell 1909, n = 19) in Kentucky, Michigan, Pennsylvania, and Tennessee. DNA preparations …

Genetic Code Expansion In Biochemical Investigations And Biomedical Applications, Nanxi Wang

Department of Chemistry: Dissertations, Theses, and Student Research

Genetic code expansion provides a powerful tool for site-specific incorporation of unnatural amino acids (unAAs) with novel biochemical and physiological properties into proteins in live cells and organisms. To achieve this, a nonsense codon suppression system, which consists of an orthogonal aminoacyl-tRNA synthetase (aaRS) and tRNA pair that specifically decodes a nonsense codon (e.g., amber codon and quadruplet codon) with an unAA but do not “cross talk” with their endogenous counterparts, was established. This Ph.D. thesis presents our efforts on evolution and application of nonsense codon suppression systems for biochemical and biomedical investigations.

In Chapter 1, a brief overview of …

A Program Aimed Toward Inclusive Excellence For Underrepresented Undergraduate Women In The Sciences, Laura A. Katz, Kathryn M. Aloisio, Nicholas J. Horton, Minh Ly, Sara B. Pruss, Kate Queeney, Cate Rowen, Patricia Marten Dibartolo

Biological Sciences: Faculty Publications

Created to foster inclusive excellence, Smith College’s Achieving Excellence in Mathematics, Engineering, and Science (AEMES) Scholars program provides early faculty-mentored research opportunities and other programming as a way to foster success in academic outcomes for underrepresented women in science. Using academic record data, we compared Scholars’ outcomes over time with those of underrepresented students before program launch and to relevant peer comparison groups. Since its launch, AEMES Scholars have achieved significantly higher gateway life sciences course grade point averages (GPAs), rates of persistence in life and natural sciences, and participation in natural sciences advanced research relative to baseline. Gains for …

Differential Toxic Effects Of Ulva Lactuca (Chlorophyta) On The Herbivorous Gastropods, Littorina Littorea And L. Obtusata (Mollusca), Paulette Peckol, Alysha B. Putnam

Biological Sciences: Faculty Publications

Members of the genus Ulva are widespread and abundant in intertidal and shallow subtidal areas but there are conflicting data regarding susceptibility to herbivory. While some studies have documented that Ulva spp. were favored by a diversity of marine herbivores, other work has revealed herbivore deterrence. We investigated grazing and growth rates of the littorinid species, Littorina littorea and L. obtusata, when offered Fucus vesiculosus, Ascophyllum nodosum, Ulva lactuca, and Chondrus crispus, highlighting distinctive vulnerabilities to toxic effects of U. lactuca. Ulva lactuca was the preferred food of L. littorea, while L. obtusata showed no grazing on this ephemeral algal …

Emerging Antimicrobial Research Against Superbugs: Perspectives From A Polymer Laboratory, Mitra S. Ganewatta, Md Anisur Rahman, Chuanbing Tang

Journal of the South Carolina Academy of Science

Infectious diseases caused by drug-resistant microorganisms have become a major contributor for human morbidity and mortality. To overcome such threats, we have developed various antimicrobial agents using natural product derivatives and metallopolymers. Abundant biomass such as resin acids can be utilized to prepare cationic polymers for inhibiting a variety of bacteria. These polymers have been used in solution as well as surfaces as antimicrobial materials with low cytotoxicity. In addition, a class of charged metallopolymers have been developed to kill superbugs such as MRSA.

Table Of Contents

Journal of the South Carolina Academy of Science

No abstract provided.

Antitumor Activity Of Selected Derivatives Of Pyrazole- Benzenesulfonamides From Dilithiated C(Α), N-Phenylhydrazones And Lithiated Methyl 2-(Aminosulfonyl)Benzoate, N. Dwight Camper [Deceased], James M. Gum, Darby E. Lyles, William T. Pennington, Charles F. Beam, Clyde R. Metz

Journal of the South Carolina Academy of Science

Several pyrazole-benzenesulfonamides were subjected to biological evaluation involving tumor formation on potato discs caused by Agrobacterium tumefaciens. This assay led to some excellent and promising initial results with three of the pyrazole compounds showing increased tumor inhibition when compared to a recognized standard, camptothecin. The select pyrazole-benzenesulfonamides were prepared by condensation-cyclization of several dilithiated C(α),N-phenylhydrazones with lithiated methyl 2-aminosulfonyl-benzoate.

Ecological Correlates With Dioecy In The Flora Of A Tropical Premontane Wet Forest In Costa Rica., Breanne Held

Undergraduate Distinction Papers

There is a considerable disagreement about the selective forces that have led to the evolution of dioecy (i.e., the condition of having separate male and female flowers on separate plants). Historically, selection to enforce outcrossing has been the primary explanation despite there being little empirical evidence. Hence, many scientist argue that the selection of dioecy is driven by ecological traits that influence male and female fitness and seed dispersal. The objective of this study was to examine the association between plant sexual system (particularly, dioecy) with various ecological traits for the flora of a tropical premontane wet forest in Costa …

Using Murine Models To Understand Tumor-Lymphoid Interactions: Spotlight On Cll And Aitl, Tyler Herek, Christine E. Cutucache

Biology Faculty Publications

The role of the tumor microenvironment in leukemias and lymphomas is well-established, yet the intricacies of how the malignant cells regulate and influence their non-malignant counterparts remain elusive. For example, chronic lymphocytic leukemia is an expansion of malignant CD5+CD19+ B cells, yet the non-malignant T cells play just as large of a role in disease presentation and etiology. Herein, we review the dynamic tumor cell to lymphoid repertoire interactions found in two Non-Hodgkin’s lymphoma subtypes: chronic lymphocytic leukemia and angioimmunoblastic T-cell lymphoma. We aim to highlight the pivot work done in the murine models which recapitulate these diseases and explore …

The Antipredator Behaviors Of Cryptic And Aposematic Anurans And Variability In Alkaloids, Conspicuousness, And Pattern Within Dendrobates Auratus (Dendrobatidae), Annelise Blanchette

Masters Theses

Crypsis and aposematism are common antipredator strategies that have evolved as defensive mechanisms to prevent predation. Prey that employ these defensive strategies also exhibit antipredator behaviors meant to avoid or deter predation. These behaviors include: (1) escape or immobility in the presence of an immediate predator or (2) exhibiting bold behavior by accepting the risk of potential predation in a novel environment in exchange for the benefits of foraging and mating opportunities. In this study, the escape and bold behaviors of cryptic members of Craugastor and the aposematic dendrobatid Dendrobates auratus were tested to compare these alternative antipredator strategies. Craugastor …

Effects Of Ultrasound On Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Sarah Byrne

Honors Theses

Alzheimer’s disease (AD) is an age related progressive neurodegenerative disease. The exact mechanisms that lead to cell death are not entirely understood. It has been shown that accumulation of amyloid-beta-42 (Aβ42) plaques generated by mis-cleavage of amyloid-precursor-protein is the cause of neurodegeneration seen in AD. This is due to the hydrophobic nature of Aβ42 due to extra two amino acids added to the typical and naturally occurring Aβ40 in the body. These Aβ42 plaques trigger neuronal death because of the toxic nature and stress they exert on the neurons. In this study, Drosophila melanogaster transgenic model where human Aβ42 coding …

Pravastatin™ Suppresses Venous Shear Stress Dependent Induction Of Aquaporin 1 Protein Expression In Human Umbilical Vein Endothelial Cells In Vitro, Raphael J. Crum

Honors Theses

Background: Aquaporins (AQPs) are transmembrane water channels that facilitate osmotically-driven transmembrane water flux. AQP1 is abundantly expressed in vascular endothelium, where it functions in endothelial cell migration, wound healing, and cell volume regulation in response to mechanical stimuli. AQP1 protein abundance is enhanced in cultured human umbilical vein endothelial cells (HUVECs) in response to fluid shear stress. Statins, a pharmacological class of HMG-CoA reductase inhibitors, suppress the early development of vein graft intimal hyperplasia by improving endothelial cell function, most likely by affecting endothelial response to arterial shear stress. Statins may also differentially regulate the expression of specific AQPs by …