Biology Commons^™

Changes In Expression Of Innervation And Accompanying Epithelium Within Sjögren's Syndrome Nod/Shiltj Mouse Model, Nicholas Pagendarm

Biological Sciences

The salivary gland produces saliva that aids in digestion and in maintaining homeostasis in the oral cavity. Saliva production is disrupted in Sjögren’s Syndrome (SS), where the salivary gland is attacked by the immune system, leading to loss of function and hyposalivation. SS is thought to be accompanied by changes in the salivary epithelium, which are incompletely understood. In this study we have used the non-obese diabetic (NOD) mouse as a model for SS to study the changes in salivary gland epithelium, as these models present autoantibodies and other characteristics such as immune infiltrates similar to those found in SS …

Is The Effect Of Glucose On Hippocampal Memory Insulin-Dependent?, Roi Ankawa

Biological Sciences

Insulin is now established as a key regulator of brain mechanisms that include both glucose metabolism and synaptic plasticity, especially within the hippocampus. However, the complex set of signaling cascades mediating these effects is not yet understood. Recent studies, many from our lab, have established that insulin plays multiple roles in the brain: in addition to regulation of energy supply, metabolism, and feeding, our work has shown that hippocampal insulin is a key modulator of learning and memory. Exogneous insulin enhances, while pharmacological blockade of intrahippocampal insulin impairs, both metabolism and cognition. Moreover, when systemic insulin signalling is impaired, such …

Fluorescence Analysis Of Expanded Trinucleotide Repeat Heterogeneity After In Vitro Pcr Amplification, Kidane M. Tewolde

Biological Sciences

The expansion of trinucleotide repeats in human genomic DNA manifests into multiple neurodegenerative diseases (Amrane et al., 2005). At least nine human diseases stem from the expression of expanded trinucleotide repeats (Box, 2007). Simple sequences such as, 5’CAG/CTG’3 repeats, contain a potential pathogenicity once expanded past their original lengths; which is exemplified in Huntington’s Diseases and Myotonic Dystrophy. Once expanded CAG repeats are transcribed into RNA, these transcripts are translated, and the mal functioning proteins can lead to severe cell damage. Furthermore, the repeats can be passed down through generations, and in each germline, continuously expanding, gaining more repeated units …

Development Of Vip-Sst Interneuron Associations In Mouse Neocortex And Entorhinal Cortex, Aayushi A. Mehta

Honors Scholar Theses

Cortical networks depend upon inhibition through the neurotransmitter GABA to control and coordinate specific spatiotemporal circuit patterns, underlying the exquisite complexity of neural signaling. Disinhibition, a form of inhibition where inhibitory neurons inhibit other inhibitory cells, further aids in amplifying local neural processing in a selective, organized manner. A subset of GABAergic interneurons, vasoactive intestinal peptide-expressing (VIP) cells, preferentially inhibit somatostatin interneurons, which provide inhibitory input onto pyramidal cells, thus creating an archetypal circuit illustrating disinhibition in the cortex. The aim of this anatomical study was to investigate variations in GABAergic VIP synapses onto somatostatin-expressing inhibitory interneurons in mice at …

Prenataland Newborn Immunoglobulin Levels From Mother-Child Pairs And Risk Of Autismspectrum Disorders, Judith K. Grether, Paul Ashwood, Judy Van De Water, Robert H. Yolken, Meredith C. Anderson, Anthony T. Torres, Jonna B. Westover, Aimee G. Tallian, Robin L. Hansen, Martin Kharrazi, Lisa A. Croen

Biology Faculty Publications

Background: An etiological role for immune factors operating during early brain development in children with autism spectrum disorders (ASD) has not yet been established. A major obstacle has been the lack of early biologic specimens that can be linked to later diagnosis. In a prior study, we found lower risk of ASD associated with higher levels of maternally-derived total IgG and Toxoplasmosis gondii (Toxo) IgG in newborn blood spot specimens from children later diagnosed with ASD compared to population controls. Methods: We obtained maternal mid-gestational serum specimens and newborn screening blood spots from the California Genetics Disease Screening Program (GDSP) …

Relationships Between Texas Tortoise Carapace Length, Home Range Size, And Habitat Selection At Sites With Invasive Grass, Kiley V. Briggs

Theses and Dissertations

Invasive grasses in south Texas have the potential to negatively impact the threatened Texas tortoise (Gopherus berlandieri) by reducing the availability of preferred foods (forbs) and may cause tortoises to travel farther, lead to reduced carapace length, and reduce the availability of refugia from heat stress. I used compositional analysis, regression, and ANOVA to explore relationships between invasive grasses and habitat use, home range size, and carapace length, as well as compared daily maximum temperatures between tussocks of an invasive and native grass. Forbs were ranked higher in use over invasive grasses in compositional analysis, but not strongly so (p …

Apoptotic And Necrotizing Mechanisms Of Recombinant Panton-Valentine Leukocidin In Thp1 Monocytes., Heriberto Deleon Iii

Theses and Dissertations

The Panton-Valentine Leukocidin (PVL) is a highly specialized bacterial exotoxin produced by Staphylococcus aureus. The increased degree of invasiveness of community associated methicillin resistant Staphylococcus aureus (CAMRSA) has been attributed to the relatively high rates of PVL produced by the pathogen, thus increasing pathogenicity and virulence. The increased rates of PVL encoding CAMRSA infections have been correlated with increased rates of necrotizing fasciitis, invasive osteomyelitis and invasive necrotizing pneumococcal infections. Previous research as revealed that PVL has the ability to induce apoptosis at low concentration (5nM-10nM) and necrosis (50-100nM) at high concentrations, with little detail on the mechanism of initiation. …

Jatropha Curcas Protoplast Isolation And Inhibitory Effects Of Culture, Christopher S. Lukaszewski

Theses and Dissertations

Improvement on the sub-tropical plant Jatropha curcas may increase the use of this drought tolerant oilseed crop for the production of biodiesel. One of the methods for enhancing a species is through genetic manipulation of the protoplast. Isolating protoplasts is challenging and culturing has many obstacles similar to those seen in tissue culture, such as oxidative browning. Successful isolation of J. curcas leaf protoplasts resulted in an average of 3.23 x 106 viable protoplasts/mL. However, protoplasts diminished within 2 days after culturing. A review of the potential solutions used for overcoming the inhibitory effects of culture may reveal further insight …

Effects Of Acclimation On Temperature Tolerance And Oxidative Damage In Daphnia Magna, Kailea J. Holbrook Ms.

Electronic Theses and Dissertations

Freshwater zooplankton crustacean Daphnia frequently face strong temperature fluctuations in its natural environment, which necessitates adaptive plastic responses. This study focuses on changes in lipid peroxidation and total oxidative capacity in Daphnia tissues in response to long-term and short-term temperature changes.

Long-term acclimation to 28ºC helped Daphnia survive longer at lethally high temperatures. This difference, however, was not accompanied by changes in lipid peroxidation, indicating that it isn’t a good measure of damage or predictor of temperature tolerance.

On the other hand, total oxidation capacity was lower 28ºC- than in 18ºC-acclimated Daphnia, suggesting that acclimation resulted in higher amounts …

Supplemental Action Learning Workshops: Understanding The Effects Of Independent And Cooperative Workshops On Students’ Knowledge, Kathryn M. Morris

Dissertations

Community colleges enroll more than half of the undergraduate population in the United States, thereby retaining students of varying demographics with extracurricular demands differing from traditional four-year university students. Often in a collegiate lecture course, students are limited in their abilities to absorb and process information presented by their instructors due to content-specific cognitive gaps between the instructor and the student (Preszler, 2009). Research has shown implementation of instructor-facilitated action learning workshops as supplemental instruction may help bridge these cognitive gaps allowing better student conceptualization and dissemination of knowledge (Drake, 2001; Fullilove & Treisman, 1990; Preszler, 2009; Udovick et al., …

Genomic Drivers Of Cutaneous Squamous Cell Carcinoma Development, Vida Chitsazzadeh

Dissertations and Theses (Open Access)

Skin cancer is the most common malignancy in humans. Annually, in U.S. there are over 3 million cases with an estimated overall economic impact of $2 billion. Cutaneous Squamous Cell Carcinoma (cuSCC) comprises 15-20% of all skin cancers. cuSCC has the best-defined progression from a distinct precancerous lesion, the Actinic Keratosis (AK), to invasive cuSCC. Destructive therapies for AK treatment must be used repetitively, causing significant morbidity. There is a tremendous need for targeted diagnostics and therapy for AKs, representing an important opportunity for secondary skin cancer prevention. Our knowledge of the molecular and cellular events that lead to the …

The Notch Target Hes4 Promotes Osteosarcoma Tumor Growth And Metastasis By Inhibiting Osteogenic Differentiation, And Has Potential As A Prognostic Biomarker For Newly Diagnosed Patients With High Grade Osteosarcoma., Madonna Mcmanus

Dissertations and Theses (Open Access)

Currently, there are no well-established prognostic biomarkers for osteosarcoma (OS) at the time of diagnosis. Although response to preoperative chemotherapy correlates with metastasis risk and overall survival, this information is obtained 3-4 months after the initial diagnosis. The major purpose of this study is to identify clinically relevant biomarkers that will allow for the stratification of patients into good or poor responders to chemotherapy at diagnosis. We also aim to understand the biology of these markers in OS pathogenesis. Because the development of OS is caused by genetic disruptions of osteogenic differentiation, we sought to identify pathways that are involved …

Friend Or Foe—Light Availability Determines The Relationship Between Mycorrhizal Fungi, Rhizobia And Lima Bean (Phaseolus Lunatus L.), Daniel J. Ballhorn, Martin Schädler, Jacob D. Elias, Jess A. Millar, Stefanie Kautz

Biology Faculty Publications and Presentations

Plant associations with root microbes represent some of the most important symbioses on earth. While often critically promoting plant fitness, nitrogen-fixing rhizobia and arbuscular mycorrhizal fungi (AMF) also demand significant carbohydrate allocation in exchange for key nutrients. Though plants may often compensate for carbon loss, constraints may arise under light limitation when plants cannot extensively increase photosynthesis. Under such conditions, costs for maintaining symbioses may outweigh benefits, turning mutualist microbes into parasites, resulting in reduced plant growth and reproduction. In natural systems plants commonly grow with different symbionts simultaneously which again may interact with each other. This might add complexity …

Characterizing Benthic Invertebrate Communities At Five South Texas Banks, Maria T. Cooksey

Theses and Dissertations

On the continental shelf off the coast of South Texas lie a series of hardbottom structures known as the South Texas Banks, which provide critical habitat for benthic organisms and pelagic fish species. The depth of the banks, a persistent nepheloid layer, and strong currents have hindered efforts to collect quantitative data on what inhabits the rocky outcrops and relic coral-algal reefs. Using a remotely operated vehicle, video data from five of the banks were collected in order to characterize the benthic communities. Southern and North Hospital Banks were found to be the most diverse of the studied South Texas …

Application Of Alternative Nucleic Acid Extraction Protocols To Progastro Sscs Assay For Detection Of Bacterial Enteric Pathogens, Erik Munson, Maureen Napierala, Kimber L. Munson, Dorothy Bilbo, Michael A. Schulte

Clinical Lab Sciences Faculty Research and Publications

As an alternative to automated extraction, fecal specimens were processed by investigational lysis/heating (i.e., manual) and by chromatography/centrifugation (i.e., column) methods. ProGastro SSC and Shiga toxin-producing Escherichia coli (i.e., STEC) indeterminate rates for 101 specimens were 1.0% to 3.0% for automated, 11.9% for manual, and 24.8% to 37.6% for column methods. Following freeze-thaw of 247 specimens, indeterminate rates were 1.6% to 2.4% for manual and 0.8 to 5.3% for column methods. Mean processing times for manual and column methods were 30.5 and 69.2 min, respectively. Concordance of investigational methods with automated extraction was ≥98.8%.

The Genetic Basis Of Baculum Size And Shape Variation In Mice, Nicholas G. Schultz, Jesse Ingels, Andrew Hillhouse, Keegan Wardwell, Peter L. Chang, James M. Cheverud, Cathleen Lutz, Lu Lu, Robert W. Williams, Matthew D. Dean

Biology: Faculty Publications and Other Works

The rapid divergence of male genitalia is a preeminent evolutionary pattern. This rapid divergence is especially striking in the baculum, a bone that occurs in the penis of many mammalian species. Closely related species often display diverse baculum morphology where no other morphological differences can be discerned. While this fundamental pattern of evolution has been appreciated at the level of gross morphology, nearly nothing is known about the genetic basis of size and shape divergence. Quantifying the genetic basis of baculum size and shape variation has been difficult because these structures generally lack obvious landmarks, so comparing them in three …

Biodiversity, Community Dynamics, And Novel Foraging Behaviors Of A Rich Native Bee Fauna Across Habitats At Pinnacles National Park, California, Joan M. Meiners

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Global concern about honeybee declines has spurred feverish research about the status and protection of this single species, yet our understanding of the ecology and issues impacting thousands of species of native bees lags behind. Pinnacles National Park, America's newest, near Salinas, California, is currently the most densely biodiverse area for native bees known on the planet. Recent work by researchers at Utah State University and the USDA-ARS has documented 479 species of native bees in only 42 square miles of this park. During two years of field studies and 308 collector days, we assembled data on 52,853 bee specimens …

Anthropogenic And Natural Stressors And Their Effect On Immunity, Reproduction, And The Stress Response, Lorin A. Neuman-Lee

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Animals must be able to cope with many natural and human-made stressors in order to successfully survive and reproduce. These stressors can come in many forms and are increasing as human activities become more and more prevalent across the globe. In order to cope with these stressors, organisms must allocate limited energy away from processes such as reproduction to mount a stress response. This stress response involves the activation of the hypothalamic-pituitary-adrenal axis and results in a cascade of hormones and down-stream effects, such as changes in reproduction and immune function. In order to understand how reptiles and amphibians cope …

The Role Of Gpr84 In Medium-Chain Saturated Fatty Acid Taste Transduction, Yan Liu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The prevalence of overweight or obese in adults has nearly doubled during the past two decades, and obesity increases the risk of heart disease, diabetes, and even some types of cancer. One of the factors closely linked with the obesity epidemic is overconsumption of dietary fat. Accumulating evidence has supported the existence of the "taste of fat", and more and more studies have focused on identifying the mechanisms of fatty acid detection by gustatory system. In this study, I showed for the first time that medium-chain saturated fatty acids (MCFAs) were able to activate taste cells isolated from mice, and …

An Allometric Approach To Evaluate Physiological And Production Efficiencies In Tree Size For Tart Cherry And Apple Orchard Systems, Zachary T. Brym

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In orchard systems, the size of a tree and the physical structure of its canopy influences how the tree gathers resources and uses them to produce fruit. Smaller orchard trees produce a higher proportion of fruit relative to their size. Small trees also produce higher quality fruit than larger trees. These relationships were demonstrated for apples and tart cherries grown in Utah. In physiological ecology, models called allometries have been developed that explain how the size of wild plants is related to growth, architecture, and reproduction. These models were applied to apple and tart cherry orchard systems and revealed consistent …

Spider Aggregate Glue Sequence Characterization And Expression, Kyle Berg

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Orb-weaving spiders create a glue which is secreted onto the web to capture and retain insects. This glue is made from aggregate protein. Aggregate glue is sticky when wet and can stretch far when pulled at slow speeds, and pull back with a greater force if pulled at high speeds which helps it achieve its purpose as the adhesive that keeps insects in the web. These features also make it an attractive target for applications such as a surgical glue or underwater adhesive. Unfortunately, very little is known about the aggregate glue gene, and knowledge of the genetic sequence is …

Insights Into The Introduction Histories And Population Genetic Dynamics Of The Nile Monitor (Varanus Niloticus) And Argentine Black And White Tegu (Salvator Merianae) In Florida., Jared Price Wood

Electronic Theses and Dissertations

This dissertation examines the population genetic dynamics of two Florida invasives: the Nile monitor (Varanus niloticus) and Argentine black and white tegu (Salvator merianae). I also provide insights into the introduction histories of both species. This study was developed as part of a collaborative effort with the Florida Wildlife Commission to expand our knowledge of these highly detrimental, invasive lizards. All research activities involving animals and animal tissues were approved by the University of Louisville’s Institutional Animal Care and Use Committee (IACUC Proposal #: 12024). I start with a brief introduction into what makes invasive species …

Physiology And Genetics Of Starvation-Selected Drosophila Melanogaster, Christopher Michael Hardy

UNLV Theses, Dissertations, Professional Papers, and Capstones

In nature, organisms have evolved to survive in stressful environments. This has driven organisms to adopt a wide range of unique adaptations. Investigating the mechanistic basis of these adaptations is an important tool for discovery that has led to major advances in science and medicine.

We study how organisms survive life without food, or starvational stress. Environmental stressors have shaped the quantity and quality of food sources across the globe. This has led to vast differences in the ability of some organisms to tolerate starvation over others. Many researchers have used Drosophila melanogaster as a model to study global patterns …

Phenotypic And Molecular Analysis Of The Effect Of 20-Hydroxyecdysone On The Human Filarial Parasite Brugia Malayi, Amruta S. Mhashilkar, Swamy R. Adapa, Rays H.Y. Jiang, Steven A. Williams, Weam I. Zaky, Barton E. Slatko, Ashley N. Luck, Andrew Moorhead, Thomas R. Unnasch

Biological Sciences: Faculty Publications

A homologue of the ecdysone receptor has been identified and shown to be responsive to 20- hydroxyecdysone in Brugia malayi. However, the role of this master regulator of insect development has not been delineated in filarial nematodes. Gravid adult female B. malayi cultured in the presence of 20-hydroxyecdysone produced significantly more microfilariae and abortive immature progeny than control worms, implicating the ecdysone receptor in regulation of embryogenesis and microfilarial development. Transcriptome analyses identified 30 genes whose expression was significantly up-regulated in 20-hydroxyecdysone-treated parasites compared with untreated controls. Of these, 18% were identified to be regulating transcription. A comparative proteomic analysis …

Phylogenetic Analysis Of Capra Hircus Commonly Found Goat Breeds Of Pakistan Using Dna Barcode, Asif Ali, Attika Rehman, Kainaat William

Journal of Bioresource Management

Cytochrome c oxidase subunit I or COI in the mitochondrial genome (DNA Barcode) of goats was used to identify and differentiate two common breeds (beetal and berberi) and crossbreeds sampled in Punjab, Pakistan. This is the first study on the molecular taxonomy of the goat breeds of Pakistan. Sequencing of DNA barcode of the beetal goat showed a 99% similarity to Capra hircus isolate LS16 cytochrome c oxidase subunit 1 (CO1) gene. Beriberi goats showed a 99% similarity to Capra hircus breed Jining Qing goat mitochondrion. Identification of goat breeds via DNA barcoding may help in local genetic improvement and …

Allelopathic Effect Of Methanol And Water Extracts Of Camellia Sinensis L. On Seed Germination And Growth Of Triticum Aestivum L. And Zea Mays L., Ambreen Waris, Laila Waris, Muhammad Azim Khan, Anwar Ali Shad

Journal of Bioresource Management

This study describes the possible effects of tea residues on crop production. To investigate the negative effects of tea on two cereal crops, i.e. wheat and maize, laboratory experiments were conducted during May 2014 and repeated in June 2014 to study the effect of black tea extract on wheat and maize seeds’ germination and growth. The experiment was conducted in petri dishes and laid out in completely randomized designs, replicated thrice. The petri dishes were kept in a growth chamber, with the temperature set at 25°C. 50 g of each dried fresh and used black tea was separately soaked in …

A Bioinformatics Approach To Addressing The Responses Of Rice Aleurone Cells To Hormones Abscisic Acid And Gibberellic Acid, Kenneth Arthur Watanabe

UNLV Theses, Dissertations, Professional Papers, and Capstones

The hormone abscisic acid (ABA) is biosynthesized by higher plants in response to various abiotic stresses such as drought and antagonizes the growth and germination-promoting hormone gibberellic acid (GA). The seed is a model system for studying desiccation tolerance and germination. The thin layer of cells surrounding the seed, the aleurone layer, plays a direct role in seed germination and an indirect role in desiccation tolerance. The goal of my research is to address the molecular mechanism underlying the responses of rice aleurone cells to ABA and GA, by taking a genomics approach. An accurate and complete annotation of the …

Production And Characterization Of Xylanase From Aspergillus Niger Using Wheat Bran, Corn Cobs, And Sugar Cane Bagasse As Carbon Sources With Different Concentrations, Muhammad Suleman, Iftikhar Hussain Bukhari, Muhammad Ikram Aujla, Abu Ul Hassan Faiz

Journal of Bioresource Management

Xylanases are enzymes that degrade Xylan, a hemicellulose found in plant cell walls, into Xylose. They are a very important class of enzymes to be used in paper and pulp industry. Removal of lignin from paper and pulp by Chlorine and its compounds have caused a serious problem in the environment. Delignification of lignin by Xylanase is an alternative approach that is environmentally friendly. The present research was conducted to produce and characterize Xylanase from the fungus Aspergillus niger using agricultural wastes/byproducts like corn cobs, wheat bran and sugar cane bagasse with different concentrations. Submerged fermentation was carried out in …

Ochratoxicosis In Monograstric Animals - A Review, Nafeesa Qudsia Hanif

Journal of Bioresource Management

Ochratoxin A (OTA) is a mycotoxin produced by several fungi of the genera Aspergillus and Penicillium, principally P. verrucosum in temperate climate and A. ochraceous in warm regions. In poultry feed materials, mycotoxins are found most commonly in cereals and to a lesser degree, in meals. The presence of OTA in animal feed contributes significantly to health disorders and decreased production. In addition to aflatoxins, which is an ubiquitously distributed toxin, OTA is one of the reasons for economic losses in the poultry industry due to poor performance and immunosuppression. Moreover, OTA has also been noted for the carryover …

Anti-Enzymatic Potential Of Two Different Varieties Of Malus Domestica, (Malus Communis Desf, Ripe And Unripe Fruits) And Their Constituent’S Analysis By Gas Chromatography And Mass Spectrometry (Gc-Ms), Anum Siddique, Muhammad Suleman, Iftikhar Hussain Bukhari, Muhammad Haleem Khan, Muhammad Ikram Aujla, Abu Ul Hassan Faiz

Journal of Bioresource Management

The paper presentscomparative study of urease and alpha-amylase inhibitory activities in two varieties of Malus species, i.e. unripened apple and gold coloured ripe apple. It is very important to know the anti enzymatic potential of these two varieties because the enzyme inhibition can be therapeutic and cure illness caused by malfunctioning of some enzymes. Objectives of this study was to determine the presence of chemical constituents, their role and inhibition activities of urease and alpha-amylase in selected apple varieties. Gas Chromatograph-Mass Spectrometric (GC-MS) was used to identify their chemical constituents. Both varieties exhibited profound activities of urease and alpha-amylase that …