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Articles 1471 - 1500 of 1508
Full-Text Articles in Biology
The Effects Of Multiple Abiotic Stressors On The Susceptibility Of The Seagrass Thalassia Testudinum To Labyrinthula Sp., The Causative Agent Of Wasting Disease, Nichole Danielle Bishop
The Effects Of Multiple Abiotic Stressors On The Susceptibility Of The Seagrass Thalassia Testudinum To Labyrinthula Sp., The Causative Agent Of Wasting Disease, Nichole Danielle Bishop
UNF Graduate Theses and Dissertations
In the past century, seagrasses have experienced massive die off episodes in what has been collectively referred to as “wasting disease.” Researchers generally agree that wasting disease is caused by a protist of the Labyrinthula genus, and that environmental stressors can make some populations of seagrasses more susceptible to infection. The purpose of this study was to examine the combined effects of elevated salinity, elevated temperature, elevated sulfide and night-time hypoxia on Thalassia testudinum health and its response to Labyrinthula sp. infection under controlled conditions. To test these effects, microcosms were utilized and individual seagrass shoots were randomly assigned to …
Variations Of Ghrelin, Growth Hormone, And Insulin-Like Growth Factor I In The West Indian Manatee (Trichechus Manatus), Rachel Lynn Cimino
Variations Of Ghrelin, Growth Hormone, And Insulin-Like Growth Factor I In The West Indian Manatee (Trichechus Manatus), Rachel Lynn Cimino
UNF Graduate Theses and Dissertations
The metabolic hormones ghrelin, growth hormone, and insulin-like growth factor I are influenced by developmental age, sex, and nutritional status in domestic and free-ranging species. However the role these hormones play has not previously been explored in sub-tropical/ tropical mammals. Furthermore, the seasonality of species with less dynamic environmental cues, such as the West Indian manatee, have not been studied. The West Indian manatee is and endangered species distributed in the southeastern United States and throughout the Caribbean basin, and its nutritional physiology is influenced by environmental factors. Understanding the hormone response to nutritional status in this species and its …
A Survey Of The Taxonomy Of The Cyanobacteria From Northeast Florida, Descriptions Of Novel Taxa, And An Investigation Into The Factors Which Influence The Epibenthic Cyanobacterial Community, Holly Stephanie Stocks
A Survey Of The Taxonomy Of The Cyanobacteria From Northeast Florida, Descriptions Of Novel Taxa, And An Investigation Into The Factors Which Influence The Epibenthic Cyanobacterial Community, Holly Stephanie Stocks
UNF Graduate Theses and Dissertations
Cyanobacteria are important components of the aquatic system, valued for their oxygen production, nitrogen fixation, and as the base of many aquatic food webs. This study investigated several aspects of cyanobacteria such as the diversity and response to nutrient enrichments. A survey of Northeast Florida was conducted between the years of 2010 and 2012; a total of 145 taxa were identified in freshwater habitats, such as springs, lakes, rivers, and retention ponds. While surveying the St. Johns River in Jacksonville, Florida, a novel Stigonematalean taxon was isolated and cultured. Subsequent morphological and genetic analyses indicate that this taxon is related …
The Influence Of Different Cover Types On American Robin Nest Success In Organic Agroecosystems, John E. Quinn, Amy Oden, James R. Brandle
The Influence Of Different Cover Types On American Robin Nest Success In Organic Agroecosystems, John E. Quinn, Amy Oden, James R. Brandle
Biology Publications
There are many opportunities for biodiversity conservation in organic farm systems. Successful and sustainable conservation efforts in organic systems, however, need to measure appropriate outcomes. In particular, data are needed on the breeding success of associated wildlife species. We measured nesting success of the American Robin (Turdus migratorius) in woodlands embedded within eight organic farms in eastern Nebraska. We modeled daily nest survival rate to identify land use and land cover patterns that optimize conservation of birds in organic farm systems. The percentage of a crop in the fields adjacent to linear woodlands best predicted daily survival rate. …
Broad-Spectrum Antibacterial Properties Of Metal-Ion Doped Borate Bioactive Glasses For Clinical Applications, Megan Ottomeyer
Broad-Spectrum Antibacterial Properties Of Metal-Ion Doped Borate Bioactive Glasses For Clinical Applications, Megan Ottomeyer
Masters Theses
"Bioactive glasses with antimicrobial properties can be implemented as coatings on medical devices and implants, as well as a treatment for tissue repair and prevention of common hospital-acquired infections such as MRSA A borate-containing glass, B3, is also undergoing clinical trials to assess wound-healing properties. The sensitivities of various bacteria to B3, B3-Ag, B3-Ga, and B3-I bioactive glasses were tested. In addition, the mechanism of action for the glasses was studied by spectroscopic enzyme kinetics experiments, Live-Dead staining fluorescence microscopy, and luminescence assays using two gene fusion strains of Escherichia coli.
It was found that gram-positive bacteria were more …
Birds And Butterflies Respond To Soil-Induced Habitat Heterogeneity In Experimental Plantings Of Native Tallgrass Prairie Species In Iowa, Usa, Benjamin J. Hoksch, Mark C. Myers, James T. Mason, Jarrett D. Pfrimmer, Andrew J. Ridgway
Birds And Butterflies Respond To Soil-Induced Habitat Heterogeneity In Experimental Plantings Of Native Tallgrass Prairie Species In Iowa, Usa, Benjamin J. Hoksch, Mark C. Myers, James T. Mason, Jarrett D. Pfrimmer, Andrew J. Ridgway
Undergraduate Student Work
We studied interrelationships between prairie plant establishment, habitat heterogeneity, and bird and butterfly biodiversity in an experimental prairie reconstruction in Iowa, USA. We seeded 48 research plots on three soil types with one of four treatments containing one, five, 16, or 32 species. During early establishment, neither bird nor butterfly abundance, species richness, or community diversity varied among the three soil types; however, there were significant treatment × soil type interactions when comparing bird and butterfly community composition among plots. Our results demonstrate that plots established with identical seed mixes and management practices developed variable habitat characteristics due to variation …
Archaeal Assemblages Inhabiting Temperate Mixed Forest Soil Fluctuate In Taxon Composition And Spatial Distribution Over Time, Colby A. Swanson, Marek K. Sliwinski
Archaeal Assemblages Inhabiting Temperate Mixed Forest Soil Fluctuate In Taxon Composition And Spatial Distribution Over Time, Colby A. Swanson, Marek K. Sliwinski
Faculty Work
This study explored the persistence and spatial distribution of a diverse Archaeal assemblage inhabiting a temperate mixed forest ecosystem. Persistence under native conditions was measured from 2001 to 2010, 2011, and 2012 by comparison of 16S rRNA gene clone libraries. The Archaeal assemblages at each of these time points were found to be significantly different (AMOVA, P < 0.01), and the nature of this difference was dependent on taxonomic rank. For example, the cosmopolitan genus g_Ca. Nitrososphaera (I.1b) was detected at all time points, but within this taxon the abundance of s_SCA1145, s_SCA1170, and s_Ca. N. gargensis fluctuated over time. In addition, spatial heterogeneity (patchiness) was measured at these time points using 1D TRFLP-SSCP fingerprinting to screen soil samples covering multiple spatial scales. This included soil collected from small volumes of 3 cubic centimeters to larger scales—over a surface area of 50 m2, plots located 1.3 km apart, and a separate locality 23 km away. The spatial distribution of Archaea in these samples changed over time, and while g_Ca. Nitrososphaera (I.1b) was dominant over larger scales, patches were found at smaller scales that were …
A Mesh Generation And Machine Learning Framework For Drosophila Gene Expression Pattern Image Analysis, Wenlu Zhang, Daming Feng, Rongjian Li, Andrey Chernikov, Nikos Chrisochoides, Christopher Osgood, Charlotte Konikoff, Stuart Newfeld, Sudhir Kumar, Shuiwang Ji
A Mesh Generation And Machine Learning Framework For Drosophila Gene Expression Pattern Image Analysis, Wenlu Zhang, Daming Feng, Rongjian Li, Andrey Chernikov, Nikos Chrisochoides, Christopher Osgood, Charlotte Konikoff, Stuart Newfeld, Sudhir Kumar, Shuiwang Ji
Computer Science Faculty Publications
Background: Multicellular organisms consist of cells of many different types that are established during development. Each type of cell is characterized by the unique combination of expressed gene products as a result of spatiotemporal gene regulation. Currently, a fundamental challenge in regulatory biology is to elucidate the gene expression controls that generate the complex body plans during development. Recent advances in high-throughput biotechnologies have generated spatiotemporal expression patterns for thousands of genes in the model organism fruit fly Drosophila melanogaster. Existing qualitative methods enhanced by a quantitative analysis based on computational tools we present in this paper would provide …
Isolation And Characterization Of A New Family Of Cysteine Rich Proteins Involved In The Assembly Process Of Dragline Silk From The Black Widow Spider, Latrodectus Hesperus, Thanh Due Pham
University of the Pacific Theses and Dissertations
Spider silks are protein-based fibers that possess remarkable mechanical properties. Major ampullate silk, also referred to as dragline silk, is renowned for its high tensile strength, extensibility and toughness. Dragline silk is produced from a liquid spinning dope that undergoes chemical and physical changes during extrusion. To date, no proteins that participate in the assembly process of major ampullate silk proteins have been identified. The goal of this project is the identification of such protein products. De novo sequencing of peptides from in pollution tryptic digestion of black widow spider dragline silk identified several novel peptides that were not derived …
Image-Level And Group-Level Models For Drosophila Gene Expression Pattern Annotation, Quian Sun, Sherin Muckatira, Lei Yuan, Shuiwang Ji, Stuart Newfeld, Sudhir Kumar, Jieping Ye
Image-Level And Group-Level Models For Drosophila Gene Expression Pattern Annotation, Quian Sun, Sherin Muckatira, Lei Yuan, Shuiwang Ji, Stuart Newfeld, Sudhir Kumar, Jieping Ye
Computer Science Faculty Publications
Background: Drosophila melanogaster has been established as a model organism for investigating the developmental gene interactions. The spatio-temporal gene expression patterns of Drosophila melanogaster can be visualized by in situ hybridization and documented as digital images. Automated and efficient tools for analyzing these expression images will provide biological insights into the gene functions, interactions, and networks. To facilitate pattern recognition and comparison, many web-based resources have been created to conduct comparative analysis based on the body part keywords and the associated images. With the fast accumulation of images from high-throughput techniques, manual inspection of images will impose a serious impediment …
Computational Genetic Neuroanatomy Of The Developing Mouse Brain: Dimensionality Reduction, Visualization, And Clustering, Shuiwang Ji
Computer Science Faculty Publications
Background: The structured organization of cells in the brain plays a key role in its functional efficiency. This delicate organization is the consequence of unique molecular identity of each cell gradually established by precise spatiotemporal gene expression control during development. Currently, studies on the molecular-structural association are beginning to reveal how the spatiotemporal gene expression patterns are related to cellular differentiation and structural development.
Results: In this article, we aim at a global, data-driven study of the relationship between gene expressions and neuroanatomy in the developing mouse brain. To enable visual explorations of the high-dimensional data, we map the in …
A Holistic Approach To Mima Mound Prairie Restoration, Kristin R. Anicito
A Holistic Approach To Mima Mound Prairie Restoration, Kristin R. Anicito
EWU Masters Thesis Collection
"Invasive winter annual grass (IWAGs) abundance has increased throughout much of the western United States, with serious consequences for biodiversity and ecosystem function. While a variety of tools have been used to control IWAGS, they often fail to achieve the goal of creating a self-sustaining native plant community. Therefore, a major goal of my thesis has been to explore and test restoration approaches that might help realize such plant communities. These approaches include ecologically based invasive plant management (EBIPM) and assisted succession. EBIPM is a holistic approach that aims to restore ecological functions damaged by IWAGs with a combination of …
Genomics Of A Metamorphic Timing Qt:: Met1 Maps To A Unique Genomic Position And Regulates Morph And Species-Specific Patterns Of Brain Transcription, Robert B. Page, M. A. Borley, D. K. Kump, S. R. Voss
Genomics Of A Metamorphic Timing Qt:: Met1 Maps To A Unique Genomic Position And Regulates Morph And Species-Specific Patterns Of Brain Transcription, Robert B. Page, M. A. Borley, D. K. Kump, S. R. Voss
Biology Faculty Publications (Archived)
Very little is known about genetic factors that regulate life history transitions during ontogeny. Closely related tiger salamanders (Ambystoma species complex) show extreme variation in metamorphic timing, with some species foregoing metamorphosis altogether, an adaptive trait called paedomorphosis. Previous studies identified a major effect quantitative trait locus (met1) for metamorphic timing and expression of paedomorphosis in hybrid crosses between the biphasic Eastern tiger salamander (Ambystoma tigrinum tigrinum) and the paedomorphic Mexican axolotl (Ambystoma mexicanum).We used existing hybrid mapping panels and a newly created hybrid cross to map the met1 genomic region and determine the effect of met1 on larval growth, …
Population Genetics Of Thomomydoecus Minor: Ectoparasitic Chewing Lice On Thomomys Bottae Pocket Gophers Of The Rio Grande Valley In New Mexico, Sheree Elizabeth Harper
Population Genetics Of Thomomydoecus Minor: Ectoparasitic Chewing Lice On Thomomys Bottae Pocket Gophers Of The Rio Grande Valley In New Mexico, Sheree Elizabeth Harper
Dissertations and Theses @ UNI
Thomomydoecus minor is an ectoparasitic chewing louse that lives in intimate association with the pocket gopher Thomomys bottae. Chewing lice are wingless, obligate, host specific parasites that spend their entire life cycle on the fur of their host. Pocket gophers are fossorial and asocial, cut off for most of their lives even from members of their own species. Thus, the life histories of both chewing lice and pocket gophers have been predicted to limit transmission of lice from host to host, thus limiting gene flow among louse infrapopulations found on different hosts and increasing the effect of louse population …
Phylogeography Of Notropis Nubilus (Ozark Minnow), Jason F. Dugan
Phylogeography Of Notropis Nubilus (Ozark Minnow), Jason F. Dugan
Dissertations and Theses @ UNI
Periodic glacial cycles beginning 2.6 million years ago to 10,000 years ago forced the repeated contraction, fragmentation, and expansion of the North American biota. In the upper Mississippi River basin three very different areas characterize the topography left by glaciations and still and influence the flora and fauna: Driftless Area, Paleozoic Plateau, and Iowan Surface. The Paleozoic Plateau is located in the northern part of the upper Mississippi River basin, and it is a unique geographical region situated in an area that straddles northeast Iowa, southeastern Minnesota, southwest Wisconsin, and northwest Illinois. This region was bypassed by the last glacial …
Worms, Nematoda, Scott Lyell Gardner
Worms, Nematoda, Scott Lyell Gardner
Scott L. Gardner Publications
Nematodes are the most speciose phylum of metazoa on earth. Not only do they occur in huge numbers as parasites of all known animal groups, but also they are found in the soils, as parasites of plants, and in large numbers in the most extreme environments, from the Antarctic dry valleys to the benthos of the ocean. They are extremely variable in their morphological characteristics, with each group showing morphological adaptations to the environment that they inhabit. Soil-dwelling forms are extremely small; many marine species have long and complex setae; and parasitic species manifest amazingly great reproductive potential and large …
Solid-Phase Organic Matter Reduction Regulates Anaerobic Decomposition In Bog Soil, Jason K. Keller, Kimberly K. Takagi
Solid-Phase Organic Matter Reduction Regulates Anaerobic Decomposition In Bog Soil, Jason K. Keller, Kimberly K. Takagi
Biology, Chemistry, and Environmental Sciences Faculty Articles and Research
Peatlands store globally significant amounts of carbon and are important sources of the greenhouse gas methane (CH4) to the atmosphere. However, for reasons which are not well understood, many peatland soils produce smaller amounts of CH4 than theoretically predicted, and carbon dioxide (CO2) produced during anaerobic decomposition in peatland soils cannot be accounted for by commonly measured microbial processes. Here we show that the reduction of solid-phase organic matter (i.e., humic substances) suppresses CH4 production in a bog soil and can be responsible for 33–61% of the total carbon mineralization in this soil. These results demonstrate that the reduction of …
The Conservation Status Of The World’S Reptiles, Tony Gamble
The Conservation Status Of The World’S Reptiles, Tony Gamble
Biological Sciences Faculty Research and Publications
Effective and targeted conservation action requires detailed information about species, their distribution, systematics and ecology as well as the distribution of threat processes which affect them. Knowledge of reptilian diversity remains surprisingly disparate, and innovative means of gaining rapid insight into the status of reptiles are needed in order to highlight urgent conservation cases and inform environmental policy with appropriate biodiversity information in a timely manner. We present the first ever global analysis of extinction risk in reptiles, based on a random representative sample of 1500 species (16% of all currently known species). To our knowledge, our results provide the …
A Transgenic Minipig Model Of Huntington's Disease, Monika Baxa, Marian Hruska-Plochan, Stefan Juhas, Petr Vodicka, Antonin Pavlok, Jana Juhasova, Atsushi Miyanohara, Tetsuya Nejime, Jiri Klima, Monika Macakova, Silvia Marsala, Andreas Weiss, Svatava Kubickova, Petra Musilova, Radek Vrtel, Emily M. Sontag, Leslie Thompson, Jan Schier, Hana Hansikova, David S. Howland, Elena Cattaneo, Marian Difiglia, Martin Marsala, Jan Motlik
A Transgenic Minipig Model Of Huntington's Disease, Monika Baxa, Marian Hruska-Plochan, Stefan Juhas, Petr Vodicka, Antonin Pavlok, Jana Juhasova, Atsushi Miyanohara, Tetsuya Nejime, Jiri Klima, Monika Macakova, Silvia Marsala, Andreas Weiss, Svatava Kubickova, Petra Musilova, Radek Vrtel, Emily M. Sontag, Leslie Thompson, Jan Schier, Hana Hansikova, David S. Howland, Elena Cattaneo, Marian Difiglia, Martin Marsala, Jan Motlik
Biological Sciences Faculty Research and Publications
Background: Some promising treatments for Huntington's disease (HD) may require pre-clinical testing in large animals. Minipig is a suitable species because of its large gyrencephalic brain and long lifespan. Objective: To generate HD transgenic (TgHD) minipigs encoding huntingtin (HTT)1–548 under the control of human HTT promoter. Methods: Transgenesis was achieved by lentiviral infection of porcine embryos. PCR assessment of gene transfer, observations of behavior, and postmortem biochemical and immunohistochemical studies were conducted. Results: One copy of the human HTT transgene encoding 124 glutamines integrated into chromosome 1 q24-q25 and successful germ line transmission occurred through successive generations (F0, F1, F2 …
Factors Shaping The Ontogeny Of Vocal Signals In A Wild Parrot, Karl S. Berg, Steven R. Beissinger, Jack W. Bradbury
Factors Shaping The Ontogeny Of Vocal Signals In A Wild Parrot, Karl S. Berg, Steven R. Beissinger, Jack W. Bradbury
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
Parrots rely heavily on vocal signals to maintain their social and mobile lifestyles. We studied vocal ontogeny in nests of wild green-rumped parrotlets (Forpus passerinus) in Venezuela. We identified three successive phases of vocal signaling that corresponded closely to three independently derived phases of physiological development. For each ontogenetic phase, we characterized the relative importance of anatomical constraints, motor skills necessary for responding to specific contexts of the immediate environment, and the learning of signals that are necessary for adult forms of communication. We observed shifts in the relative importance of these three factors as individuals progressed from …
Opportunistic Pathogenic Bacteria Colonize Thorns Of Native Rio Grande Valley Plants, Felicia A. Charles, Sergio Cepeda, J. Andrew Mcdonald, Kristine L. Lowe
Opportunistic Pathogenic Bacteria Colonize Thorns Of Native Rio Grande Valley Plants, Felicia A. Charles, Sergio Cepeda, J. Andrew Mcdonald, Kristine L. Lowe
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
Thorns serve as mechanical defenses of plants against herbivory. However, plant thorns harbor microorganisms that are potentially pathogenic. These pathogens may be transferred to herbivores and other animals and provide an additional defense for the plants. Thorns from 5 plant species native to the Rio Grande Valley of South Texas were collected and used to isolate bacteria colonizing the thorn surface. Thorns, leaves and stems of plants were visualized using Scanning Electron Microscopy (SEM) to observe any bacteria on the plant surface. Isolated bacteria were tested for their ability to grow in aerobic versus anaerobic environments, to produce hemolysis, carbon …
Arthropod Abundance And Diversity In Street Trees Of South Texas, Usa, Alexis Racelis, Ann T. Vacek, Carol Goolsby, John Brush, John A. Goolsby
Arthropod Abundance And Diversity In Street Trees Of South Texas, Usa, Alexis Racelis, Ann T. Vacek, Carol Goolsby, John Brush, John A. Goolsby
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
In urban areas, street trees provide a variety of ecological services, including biodiversity conservation. In this study we examined arthropod diversity on native and non-native street trees sampled during the fall of 2010 and spring of 2011 in McAllen, Texas, one of the most rapidly growing urban areas in the country. Eighty-eight street trees were sampled by removing arthropods from the lower canopy foliage using a hand held vacuum. Arthropods were collected into nylon bags, identified to order, and counted by morphospecies. Overall, street trees supported a significant and diverse population of arthropods: a total of 1,971 arthropods were collected, …
Mitigating Predatory Ants Promotes Establishment Of Biological Control Of Arundo By Arundo Scale In The Cattle Fever Tick Quarantine Zone, A. Velez-Bonner, W. L. A. Osbrink, D. W. Thomas, Kenneth R. Summy, A. T. Showler, A. Perez De Leon, John A. Goolsby
Mitigating Predatory Ants Promotes Establishment Of Biological Control Of Arundo By Arundo Scale In The Cattle Fever Tick Quarantine Zone, A. Velez-Bonner, W. L. A. Osbrink, D. W. Thomas, Kenneth R. Summy, A. T. Showler, A. Perez De Leon, John A. Goolsby
School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)
Ant collection, identification, and control experiments were conducted to improve the establishment of the arundo scale, Rhizaspidiotus donacis, a biological control agent of Arundo donax, an invasive weed in the riparian habitats along the Rio Grande in Texas. Observational studies indicated R. donacis immatures are preyed upon by a variety of predator insects, especially ants. A survey of the principle ant species was made at sites along the Rio Grande with Arundo donax to help direct biological control strategies. We conclude that uses of ant baits can effectively control the common ant species found in these habitats and improve the …
Exploring The Sulfide Tolerance Of Ectosymbiotic Niphargus Amphipods From The Frasassi Caves, Central Italy, Jan Bauermeister, Karoline Assig, Sharmishtha Dattagupta
Exploring The Sulfide Tolerance Of Ectosymbiotic Niphargus Amphipods From The Frasassi Caves, Central Italy, Jan Bauermeister, Karoline Assig, Sharmishtha Dattagupta
International Journal of Speleology
Two species of the crustacean amphipod genus Niphargus inhabit the sulfidic groundwaters of the Frasassi caves in central Italy, and both harbor filamentous, sulfide-oxidizing Thiothrix ectosymbionts. As sulfide is toxic to most aerobic organisms, it appeared possible that the ectosymbionts could help their Niphargus hosts with detoxification processes. In this study, mortality due to sulfide was compared between Niphargus individuals with ectosymbionts and individuals whose ectosymbionts had been killed by antibiotic treatment. Both Frasassi-dwelling Niphargus species revealed exceptionally high tolerances to sulfide compared to other amphipod species studied so far. Niphargus individuals without viable ectosymbionts tolerated sulfide levels exceeding those …
The Effect Of Visual Wulst Lesions And Trigeminal Nerve Sectioning On The Discrimination Of Magnetic Inclination In The Homing Pigeon (Columba Livia), Merissa Acerbi
Honors Projects
The ability of homing pigeons to return to their loft from unknown places has fascinated scientists for centuries. It is well established that homing pigeons, like migratory birds, posses an innate magnetic inclination compass to determine direction by measuring the angle between the magnetic field vector and the Earth's surface. Recent work has indicated that the avian magnetic compass is light mediated and appears to mediate magnetic information to the brain. This occurs via a visual pathway with processing in the visual Wulst area of the forebrain. There is, however, also evidence from other avian species that magnetic direction may …
Comparison Of The Volatiles Of Daphne Pontica L. And D. Oleoides Schreber Subsp. Oleoides Isolated By Hydro- And Microdistillation Methods, İlhan Gürbüz, Betül Demi̇rci̇, Gerhard Franz, Kemal Hüsnü Can Başer, Erdem Yeşi̇lada, Fati̇h Demi̇rci̇
Comparison Of The Volatiles Of Daphne Pontica L. And D. Oleoides Schreber Subsp. Oleoides Isolated By Hydro- And Microdistillation Methods, İlhan Gürbüz, Betül Demi̇rci̇, Gerhard Franz, Kemal Hüsnü Can Başer, Erdem Yeşi̇lada, Fati̇h Demi̇rci̇
Turkish Journal of Biology
Aerial parts of Daphne pontica were collected from Ilgaz-Çankırı, and D. oleoides subsp. oleoides was collected from 2 different localities (Ayrancı-Karaman and Ilgaz-Çankırı) in Turkey. The samples were subjected to hydrodistillation and microdistillation. The resulting volatile samples were analyzed both by gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS), respectively. The main components for D. pontica were identified as hexahydrofarnesyl acetone (8.6%), carvacrol (8.5%), dihydroedulane II (4.7%), (E)-geranyl acetone (4.6%), and thymol (4.5%), while nonacosane (42.5% and 27.2%), hexadecanoic acid (24.4% and 20.0%), phytol (12.3%), and carvacrol (5.0%) were identified as the main components of D. oleoides subsp. oleoides obtained …
Investigation Of The Genotoxic And Antigenotoxic Properties Of Essential Oils Obtained From Two Origanum Species By Drosophila Wing Smart Assay, Eşref Demi̇r, Bülent Kaya, Ricard Marcos, Serap Kocaoğlu Cenkci̇, Hüseyi̇n Çeti̇n
Investigation Of The Genotoxic And Antigenotoxic Properties Of Essential Oils Obtained From Two Origanum Species By Drosophila Wing Smart Assay, Eşref Demi̇r, Bülent Kaya, Ricard Marcos, Serap Kocaoğlu Cenkci̇, Hüseyi̇n Çeti̇n
Turkish Journal of Biology
In this study, essential oils extracted from 2 species of oregano, Origanum onites L. and Origanum minutiflorum O.Schwarz & P.H.Davis, were assayed for genotoxicity using the somatic mutation and recombination test (SMART) in Drosophila melanogaster. Results indicated that there is no significant genotoxic effect of the 2 oils tested. In addition, the antigenotoxic activities of these oils against potassium dichromate (K_{2}Cr_{2}O_{7}) and cobalt chloride (CoCl_{2}) were tested. Results indicated that essential oil cotreatments were able to abolish the genotoxic effects induced by the 2 metal compounds. It is suggested that the observed effects can be linked to the antioxidant properties …
Membrane And Dna Damaging/Protective Effects Of Eugenol, Eucalyptol, Terpinen-4-Ol, And Camphor At Various Concentrations On Parental And Drug-Resistant H1299 Cells, Aysun Özkan, Ayşe Erdoğan
Membrane And Dna Damaging/Protective Effects Of Eugenol, Eucalyptol, Terpinen-4-Ol, And Camphor At Various Concentrations On Parental And Drug-Resistant H1299 Cells, Aysun Özkan, Ayşe Erdoğan
Turkish Journal of Biology
Eugenol, eucalyptol, terpinen-4-ol, and camphor, used as flavor agents in cosmetic and food products, have both prooxidant and antioxidant activities. To clarify the mechanisms of their cytotoxic effect and the factors affecting their antioxidant/prooxidant activities, we investigated cell membrane and DNA damage/protective effects induced by eugenol, eucalyptol, terpinen-4-ol, and camphor in parental and drug-resistant human lung cancer cell lines. The parental cells were found approximately 3, 6, and 8 times more sensitive to camphor cytotoxicity than drug-resistant cells at 24, 48, and 72 h respectively. The cytotoxic activity for both cell types was found to be in the order of …
Proteomic Evidence For The Plasticity Of Cultured Vascular Smooth Muscle Cells, Ahmet Tarik Baykal, Betül Baykal, Müge Serhatli, Zelal Adigüzel, Mehmet Altuğ Tunçer, Ömer Kaçar, Kemal Baysal, Ceyda Açilan Ayhan
Proteomic Evidence For The Plasticity Of Cultured Vascular Smooth Muscle Cells, Ahmet Tarik Baykal, Betül Baykal, Müge Serhatli, Zelal Adigüzel, Mehmet Altuğ Tunçer, Ömer Kaçar, Kemal Baysal, Ceyda Açilan Ayhan
Turkish Journal of Biology
Morphological, functional, and gene expression studies have established the phenotypic plasticity of smooth muscle cells (SMCs). These cells have been shown to respond to environmental stimulants such as extracellular matrix and growth factors. Cellular changes can vary between extremes defined as the contractile and synthetic states. Various growth factors have been shown to have profound effects on the phenotype of these cells. In this study, we intended to investigate the effects of growth factor-rich medium on the protein expression of vascular SMCs in culture. Interestingly, transiently changing the type of medium did not result in any apparent morphological differences, yet …
Pomegranate (Punica Granatum L.) Reduces Endoplasmic Reticulum Stress Induced By Renal Ischemia/Reperfusion Injury In Rat, Khadijeh Hashemi, Kazem Parivar, Samira Fazlifar, Alireza Haghparast, Mehrdad Mohri, Naser Margan Azghadi, Mohammadhossein Nazem Shirazi, Amir Afkhami Goli
Pomegranate (Punica Granatum L.) Reduces Endoplasmic Reticulum Stress Induced By Renal Ischemia/Reperfusion Injury In Rat, Khadijeh Hashemi, Kazem Parivar, Samira Fazlifar, Alireza Haghparast, Mehrdad Mohri, Naser Margan Azghadi, Mohammadhossein Nazem Shirazi, Amir Afkhami Goli
Turkish Journal of Biology
Ischemia/reperfusion (I/R) is one of the main causes of acute renal failure, leading to generation of reactive oxygen species (ROS) and ensuing oxidative stress, which results in unfolded/misfolded protein accumulation and its dependent response pathways, generally known as unfolded protein response (UPR), in the endoplasmic reticulum (ER). We studied the effects of renal I/R on the expression of ER-stress genes, as well as concomitant effects of oral pretreatment with pomegranate (Punica granatum L.) pith and carpellary membrane (PPCM). An in vivo model of rat kidney I/R followed by conventional and real-time RT-PCR was used to evaluate the modulation of GRP78 …