Biology Commons^™

Comparison Of A Length Size Limit Of Northern Pike Population On Two Lakes In North Central Minnesota, Ethan A. Puttonen

Journal of Earth and Life Science

Fisheries managers use length size limits on northern pike (Esox lucis) to improve the size structure in select lakes. The objective of this study was to compare two similar lakes, one with a length size limit and one without, to determine if a length size limit is improving the northern pike size structure. Blueberry Lake showed a higher abundance of larger fish than Stocking Lake. Of the fish caught, 25% in Blueberry Lake were over 600 mm (24 in), and were in the protected slot. Stocking Lake had a smaller portion of fish of this size with only …

Testing For Indirect Benefits Of Polyandry In The Florida Green Turtle, Christopher Long

Electronic Theses and Dissertations

Behavioral studies in the green turtle (Chelonia mydas) have indicated that promiscuous mating is commonplace. Though it has been shown that there is much variation in the rate of polyandry (females mating with multiple males), the drivers behind polyandry in this species are unknown. It has been speculated, but never demonstrated, that indirect benefits (fitness benefits resulting from offspring genetic diversity) play a role. However, previous tests of this hypothesis have limited scope of inference due to lack of environmental control. In this thesis, I attempted to study the indirect benefits of polyandry in Archie Carr National Wildlife Refuge (ACNWR) …

Florida Local Government Conservation Planning: Variability, Drivers, And Policy Implications, Pamela Pannozzo

Electronic Theses and Dissertations

This study examined the quality of Florida county government conservation planning. To assess conservation planning quality, a theoretical model of conservation planning as prescribed by the conservation science literature was first developed. A plan evaluation coding protocol was applied to local comprehensive plan Conservation Elements to determine the extent to which county-level conservation planning met the theoretical model. A high degree of variability in conservation planning quality was found. Highest quality conservation planning occurred in the Gulf coast counties of southwest Florida. Lowest conservation planning quality occurred in the Florida Panhandle counties. The quality of conservation planning of coastal counties …

Sex Ratios Of Juvenile Green Turtles (Chelonia Mydas) In Three Developmental Habitats Along The Coast Of Florida, Cheryl Sanchez

Electronic Theses and Dissertations

The concept of temperature dependent sex determination (TSD) has been somewhat of an evolutionary enigma for many decades and has had increased attention with the growing predictions of a changing climate, particularly in species that are already threatened or endangered. TSD taxa of concern include marine turtles, which go through various life stages covering a range of regions. This, in turn, creates difficulties in addressing basic demographic questions. Secondary sex ratios (from life stages post-hatchling) were investigated by capturing juvenile green turtles (Chelonia mydas), 22.6-60.9 cm in straight carapace length (SCL), from three developmental areas along the east coast of …

Population Dynamics And Environmental Factors Influencing Herbs In Intact And Degraded Florida Rosemary Scrub, Elizabeth Stephens

Electronic Theses and Dissertations

Species have complex and contextual relationships with their environment; both the relative contributions of life-history stages to population growth and the effect of environmental factors on each stage can be different among co-existing species. Timing and extent of reproduction, survival, and mortality determine population growth, species distributions, and assemblage patterns. I evaluate the role of habitat (intact, degraded) and microsite (shrub, leaf litter, bare sand) on population dynamics of Florida scrub herbs. Isolated overgrown shrubs and extensive bare sand areas in degraded scrub were expected to decrease seed predation, reduce competition of herbs with shrubs, and provide larger habitat for …

A Multi-Method Study Of The Socioeconomic Status Of People Living On The Kumbon Landfill In Khon Kaen, Thailand, Candace Leflame

Whittier Scholars Program

This project is multidimensional including data from questionnaires, inventories, maps, life stories, focus groups and interviews to create a data analysis on the socioeconomic status of people living on the Kumbon landfill. This students shares history of the landfill and explains how the pile of waste has become both home and work to a population of people. They write, Socioeconomic studies in this community are very limited due to the overwhelming environmental health hazards that are affecting surrounding communities. Governments and individual research faculties have been more interested to the effect to the surrounding villages than to the actual people …

Biology And Ecology Of Glyphosate-Resistant Giant Ragweed, Kabelo Segobye

Open Access Theses

Giant ragweed (Ambrosia trifida L.) is a competitive annual plant found in disturbed landscapes and is the most troublesome weed in Indiana and the US Corn Belt. It is one of the most common and problematic weeds in corn and soybean production. The introduction of herbicide glyphosate, N-(phosphonomethyl) glycine in early 1970's provided farmers with a better and low-cost tool to control weeds. The use of glyphosate drastically increased after the development of glyphosate resistant agronomic crops in 1996 and was use as a post-emergence selective herbicide. This led to overreliance and repeated use of glyphosate for weed control especially …

Pushing Taxonomy To Extiction?, Alessandro Minelli, Annemarie Ohler, Erna Aescht, Aaron Bauer, Lucio Bonato, Roger Bour, Marcelo Rodrigues De Carvalho, Rafael O. De Sá, Et Al.

Biology Faculty Publications

Can we describe all species on Earth before they disappear? We argue that this is possible only by endowing taxonomy with professional manpower and appropriate material resources as required by big science.

Contrary to Costello et al.’s (CMS) (1) statements, taxonomy is not an easy discipline accessible to all through a smartphone. It requires exhaustive training and long familiarity with field, specimens and literature (2).

CMS’s argument is framed in terms of species numbers, but different, non-overlapping species concepts apply to bacteria, brambles and birds (3,4,5): “the species” as common unit of biodiversity does not exist (6).

Even ignoring this …

Tnt1 Retrotransposon Mutagenesis: A Tool For Soybean Functional Genomics, Yaya Cui, Shyam Barampuram, Minviluz G. Stacey, C. Nathan Hancock, Seth Findley, Melanie Mathieu, Zhanyuan Zhang, Wayne A. Parrott, Gary Stacey

Faculty Publications

Insertional mutagenesis is a powerful tool for determining gene function in both model and crop plant species. Tnt1, the transposable element of tobacco (Nicotiana tabacum) cell type 1, is a retrotransposon that replicates via an RNA copy that is reverse transcribed and integrated elsewhere in the plant genome. Based on studies in a variety of plants, Tnt1 appears to be inactive in normal plant tissue but can be reactivated by tissue culture. Our goal was to evaluate the utility of the Tnt1 retrotransposon as a mutagenesis strategy in soybean (Glycine max). Experiments showed that the …

Prenatal Choline Supplementation And Mk-801 Toxicity: Protecting Memory And Preventing Neurodegeneration, Chelsea Nickerson

Honors Theses

Choline is essential to the development and function of the central nervous system. Supplemental choline is neuroprotective against a variety of insults, including neurotoxins like dizocilpine (MK-801). MK-801 is an NMDA receptor antagonist that is frequently used in rodent models of psychological disorders. At low doses, it causes cognitive impairments, and at higher doses it induces motor deficits, anhedonia, and neuronal degeneration. The primary goals of the present study were to investigate whether prenatal choline supplementation protects against the cognitive impairments, motor deficits, and neuropathologies that are precipitated by MK-801 administration in adulthood. Adult male Sprague Dawley rats were fed …

Investigating The Role Of Epibiotic Bacteria In Defense Against Chytridiomycosis In The Green Frog, Lithobates Clamitans, Sarah Nalven

Honors Theses

Amphibian populations have been declining for several decades, in part due to the emerging fungal skin disease, chytridiomycosis, caused by the chytrid fungus Batrachochytrium dendrobatidis (Bd). Chytridiomycosis has caused extinctions and extirpations in many parts of the world, but its influence varies across species, populations, and individuals. The Green Frog (Lithobates clamitans), which inhabits the eastern half of the United States, seems capable of sustaining Bd infections without experiencing die-offs. It is possible that the Green Frog's epibiotic bacteria are contributing to its defense against Bd as the epibiotic bacteria of several amphibian species are known to play …

Comparative Study Of Environmental Factors Influencing Motor Task Learning And Memory Retention In Sighted And Blind Crayfish, Sonya M. Bierbower, Zhanna P. Shuranova, Kert Viele, Robin L. Cooper

Biology Faculty Publications

In classical conditioning, an alteration in response occurs when two stimuli are regularly paired in close succession. An area of particular research interest is classical conditioning with a chemical signal and visual and/or tactile stimuli as the unconditional stimuli, to test manipulative and motor behaviors in a learning paradigm. A classical learning task chamber was developed to examine learning trends in a sighted surface-dwelling crayfish, Procambarus clarkii, and in a blind cave-dwelling crayfish, Orconectes australis packardi. We examined whether learning is influenced by environmental factors and/or reliance on different primary sensory modalities. Crayfish were trained to manipulate a large, cumbersome …

Genomics Of A Metamorphic Timing Qtl: Met1 Maps To A Unique Genomic Position And Regulates Morph And Species-Specific Patterns Of Brain Transcription, Robert B. Page, Meredith A. Boley, David K. Kump, Stephen R. Voss

Biology Faculty Publications

Very little is known about genetic factors that regulate life history transitions during ontogeny. Closely related tiger salamanders (Ambystoma species complex) show extreme variation in metamorphic timing, with some species foregoing metamorphosis altogether, an adaptive trait called paedomorphosis. Previous studies identified a major effect quantitative trait locus (met1) for metamorphic timing and expression of paedomorphosis in hybrid crosses between the biphasic Eastern tiger salamander (Ambystoma tigrinum tigrinum) and the paedomorphic Mexican axolotl (Ambystoma mexicanum). We used existing hybrid mapping panels and a newly created hybrid cross to map the met1 genomic region and …

Ketamine Induced Deficits In Working Memory With Relevance To Schizophrenia, Michael A. Langhardt, Jefferson Kinney

McNair Poster Presentations

Schizophrenia is a chronic debilitating brain disorder, which affects approximately one per­cent of the adult population worldwide. The symptoms of schizophrenia are commonly divided into three broad classes: positive symptoms, negative symptoms, and cognitive disturbances (Kay, et al., 1987). The positive symptoms of schizophrenia include hallucinations, delusions, and dis­organized thinking, while the negative symptoms include affective flattening, social withdrawal, and an inability to plan and carry out future activities. The cognitive disturbances exhibited in schizophrenia include deficits in spatial reference and working memory as well as difficulties with focus and attention (Lewis et. al., 2007). Several models have been proposed …

The Effects Of Nickel Chloride Stress On Freshwater Cyanobacterium Synechococcus Sp. Iu 625, Brian Nohomovich

Seton Hall University Dissertations and Theses (ETDs)

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Are Incomplete Denitrification Pathways A Common Trait In Thermus Species From Geothermal Springs In China?, Julienne J. Paraiso, Brian P. Hedlund

McNair Poster Presentations

Temperature has strong impacts on ecosystem function and biogeochemical cycles, particularly within extreme environments such as geothermal springs above 60 °C. The primary focus of this study was to investigate the denitrification pathways of Thermus (Bacteria) isolates from geothermal springs from Tengchong, China. This study tested the hypothesis that incomplete denitrification is a common characteristic of the genus Thermus, regardless of geographic origin or species affiliation, which would implicate them in the efflux of nitrous oxide (a strong greenhouse gas) to the atmosphere. In this study, we cultivated 25 isolates, including six known Thermus species, and measured the stoichiometry …

An Acute Inflammatory Response In A Diabetic Alzheimer’S Disease Model, Krystal Courtney D. Belmonte, Jefferson Kinney

McNair Poster Presentations

Alzheimer’s disease (AD) is the most common form of dementia, accounting for 50 to 80 percent of all dementia cases. This neurodegenerative disease leads to neuronal death and tissue loss in the brain, resulting in the slow deterioration of memory, thinking skills, and eventually even the ability perform daily tasks. While it is not a normal part of aging, AD is mostly diagnosed in people over the age of 65; thus, the main risk factor for Alzheimer’s disease is increased age, though it is most likely other additional factors also contribute (Heese & Akatsu, 2006). Neuropathological hallmarks of AD include …

Variation Of Nimc1 Expression In Drosophila Stocks And Transgenic Strains, Viktor Honti, Gyöngyi Cinege, Gábor Csordás, Éva Kurucz, János Zsámboki, Cory J. Evans, Utpal Banerjee, István Andó

Biology Faculty Works

The NimC1 molecule has been described as a phagocytosis receptor, and is being used as a marker for professional phagocytes, the plasmatocytes, in Drosophila melanogaster. In studies including tumor-biology, developmental biology, and cell mediated immunity, monoclonal antibodies (P1a and P1b) to the NimC1 antigen are used. As we observed that these antibodies did not react with plasmatocytes of several strains and genetic combinations, a molecular analysis was performed on the structure of the nimC1 gene. In these strains we found 2 deletions and an insertion within the nimC1 gene, which may result in the production of a truncated NimC1 protein. …

The Pea Aphid Uses A Version Of The Terminal System During Oviparous, But Not Viviparous, Development, Ryan D. Bickel, Hillary C. Cleveland, Joanna Barkas, Caitlin C. Jeschke, Amelie A. Raz, David L. Stern, Gregory K. Davis

Biology Faculty Research and Scholarship

Background: In most species of aphid, female nymphs develop into either sexual or asexual adults depending on the length of the photoperiod to which their mothers were exposed. The progeny of these sexual and asexual females, in turn, develop in dramatically different ways. The fertilized oocytes of sexual females begin embryogenesis after being deposited on leaves (oviparous development) while the oocytes of asexual females complete embryogenesis within the mother (viviparous development). Compared with oviparous development, viviparous development involves a smaller transient oocyte surrounded by fewer somatic epithelial cells and a smaller early embryo that comprises fewer cells. To investigate …

The Evodevoci: A Concept Inventory For Gauging Students’ Understanding Of Evolutionary Developmental Biology, Kathryn E. Perez, Anna Hiatt, Gregory K. Davis, Caleb Trujillo, Donald P. French, Terry Mark, Rebecca M. Price

Biology Faculty Research and Scholarship

The American Association for the Advancement of Science 2011 report Vision and Change in Undergraduate Biology Education encourages the teaching of developmental biology as an important part of teaching evolution. Recently, however, we found that biology majors often lack the developmental knowledge needed to understand evolutionary developmental biology, or “evo-devo.” To assist in efforts to improve evo-devo instruction among undergraduate biology majors, we designed a concept inventory (CI) for evolutionary developmental biology, the EvoDevoCI. The CI measures student understanding of six core evo-devo concepts using four scenarios and 11 multiple-choice items, all inspired by authentic scientific examples. Distracters were designed …

Response Of Macroarthropod Assemblages To The Loss Of Hemlock (Tsuga Canadensis), A Foundation Species, Tara E. Sackett, Sydne Record, Sharon Bewick, Benjamin Baiser, Nathan J. Sanders, Aaron M. Ellison

Biology Faculty Research and Scholarship

In eastern North American forests, eastern hemlock (Tsuga canadensis) is a foundation species. As hemlock is lost from forests due to the invasive hemlock woolly adelgid (Adelges tsugae) and preemptive salvage logging, the structure of assemblages of species associated with hemlock is expected to change. We manipulated hemlock canopy structure at hectare scales to investigate the effects of hemlock death on assemblages of ants, beetles, and spiders in a New England forest. Relative to reference hemlock stands, both in situ death of hemlock and logging and removal of hemlock altered composition and diversity of beetles and spiders, and logging increased …

Aβ Alters The Dna Methylation Status Of Cell-Fate Genes In An Alzheimer’S Disease Model, Gary D. Isaacs, Noor Taher, Courtney Mckenzie, Rebecca Garrett, Matthew Baker, Nena Fox

Faculty Publications and Presentations

Alzheimer’s disease (AD) is characterized by neurofibrillary tangles and extracellular amyloid-β plaques (Aβ). Despite ongoing research, some ambiguity remains surrounding the role of Aβ in the pathogenesis of this neurodegenerative disease. While several studies have focused on the mutations associated with AD, our understanding of the epigenetic contributions to the disease remains less clear. To that end, we determined the changes in DNA methylation in differentiated human neurons with and without Aβ treatment. We isolated the DNA from neurons treated with Aβ or vehicle, and digested the two samples with either a methylation-sensitive (HpaII) or a methylation-insensitive (MspI) restriction endonuclease. …

Interaction Between Maltose Binding Protein And Escherichia Coli Maltose Transporter, Yan Huang

Open Access Theses

The ATP-binding cassette (ABC) transporter superfamily is one of the largest families of transport proteins. The ABC transporters are responsible for selective permeability of solute across membranes energized by ATP hydrolysis, which occurs in all domains of life. Maltose transporter is an ABC importer that mediates maltose/maltodextrin uptake in bacteria and archaea. It is identified as an essential virulence factor in pathogenic species of Streptococcis pyogenes and Vibrio cholera (1, 2). Escherichia coli maltose transporter is a well-characterized system with crystal structures and exclusive biochemical studies available. Knowledge of the E. coli maltose transport mechanism will lead to a better …

Isolation Of Ribosomal Mutants With A Decreased Tendency For Premature Release Of Peptidyl-Trna, Katherine Ams

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.

Tryotophanase Inhibition By Nusb Elimination In Svs1144 E. Coli: A Potential Biofilm Synthesis Control Point, Aaron Henslee

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.

Biology Department Newsletter, No. 3, Sacred Heart University

Biology Newsletter

No abstract provided.

Landscape Characteristics Of Upland Sandpiper Habitat In Michigan, Jacob Lawrence Korte

Wayne State University Theses

Grassland bird populations have declined across North America due to habitat loss but at a disproportionately higher rate in the midwestern United States, where extensive coverage of grasslands and other open land ecosystems have been converted to other land cover types. The upland sandpiper (Bartramia longicauda Bechstein, UPSA) is a migratory, area-sensitive, terrestrial shorebird that breeds in grasslands and other open land ecosystem types across their North American range. Although breeding habitats of the Great Plains contain the greatest concentrations of this species, anthropogenic openings such as hayfields and pastures serve as surrogate habitat elsewhere, as do remnant patches …

A Predictive Model For Soil Seed Bank Outcomes In The Pyrenophora Semeniperda-Bromus Tectorum Pathosystem, Phil Stewart Allen, Susan E. Meyer, Julie Beckstead

Biology Faculty Scholarship

Pyrenophora semeniperda is abundant in soil seed banks of Bromus tectorum, where it kills a fraction of seeds throughout the year. The pathogen engages in a race with host seeds for endosperm resources; the pathogen success is negatively correlated with seed germination speed. We developed a deterministic model to predict pathosystem outcomes (seed death versus seed escape), using seed bank data from 80 sites collected over a 13-year period. The response variable (killed seeds in the spring seed bank) was regressed on multiple predictor variables (pathogen and host densities at seed dispersal, amount and timing of precipitation). Increased mortality …

Pre-Binding Sites In The Mdr Of Cll: Potential Tumor Suppressor Regulation, Christine E. Cutucache, Javeed Iqbal, Philip Bierman, Robert Gregory Bociek, Dennis D. Weisenburger, Shantaram S. Joshi

Biology Faculty Publications

Chronic lymphocytic leukemia [CLL] is the most common adult leukemia and is heterogeneous in clinical presentation. CLL cases present with various chromosomal aberrations, including 11q23, 14q32, 17p, and trisomy 12, with the most common abnormality being deletion of 13q14 [1]. Although monoallelic deletion of 13q14 is common, there is a subset of patients who have complete nullisomy at 13q14, a locus that has been hypothesized to contribute to CLL pa thogenesis [2] due to loss of tumor suppressors [DLEU and miR-15a/16-1].We hypothesized that deletion of both copies of 13q14 would lead to uncontrollable proliferation …

Sensitivity Of Grassland Plant Community Composition To Spatial Vs. Temporal Variation In Precipitation, Elsa E. Cleland, Scott L. Collins, Timothy L. Dickson, Emily C. Farrer, Katherine L. Gross, Laureano A. Gherardi, Lauren M. Hallett, Richard J. Hobbs, Joanna S. Hsu, Laura Turnball, Katharine N. Suding

Biology Faculty Publications

Climate gradients shape spatial variation in the richness and composition of plant communities. Given future predicted changes in climate means and variability, and likely regional variation in the magnitudes of these changes, it is important to determine how temporal variation in climate influences temporal variation in plant community structure. Here, we evaluated how species richness, turnover, and composition of grassland plant communities responded to interannual variation in precipitation by synthesizing long-term data from grasslands across the United States. We found that mean annual precipitation (MAP) was apositive predictor of species richness across sites, but a positive temporal relationship between annual …