Biology Commons^™

Bahamian Reef Communities: Composition, Recruitment And Change (10 Meters To 250 Meters), William E. Avery

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The composition, recruitment rates and fine-scale spatial dynamics of the sessile benthic community occupying hard substrata off Lee Stocking Island, The Bahamas, was determined through photography and the deployment of artificial substrata from September 1993 to September 1996. The study spanned 10 to 250 meters in depth. The benthic community exhibited a pronounced bathymetric zonation. Filamentous and macroalgae dominated the shallow communities, but were replaced by corals, sponges and endolithic algae with increasing depth. Living cover was high above 100 m, but declined significantly below this depth, being replaced by increasing amounts of bare and sediment-covered rock surfaces. Benthic zonation …

Short-Eared Owl Post-Fledging Survival And Breeding Season Diet, Thomas A. Rivest

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

My research primarily focused on the survival of short-eared owls (Asio flammeus) from leaving the nest until their emigration from their natal territories during 1993 and 1994. I attached tarsal-mounted radio transmitters to nestlings prior to fledging. Of 25 fledgling short-eared owls monitored, 16 (64%) died prior to dispersal and one (4%) died after dispersing. Mammalian predation (5, 29.4%) was the primary cause of mortality followed by starvation (4, 23.5%), exposure (2, 11.8%), auto collision (1, 5.9%), burial (1, 5.9%), and unknown causes (4, 23.5%). Hatch date was found to be negatively correlated with fledgling survival.

A secondary …

The Role Of Cold Acclimatization On The Biogeography Of The Mountain Chickadee (Parus Gambeli) And The Juniper Titmouse (Parus Ridgwayi), Sheldon J. Cooper

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Biogeographic patterns of animals are shaped by biotic interactions, such as competition, and by abiotic factors, such as climate. Mountain Chickadees (Parus gambeli) and Juniper Titmice (Parus ridgway) are permanent residents of regions of western North America and are ecologically similar, but have different northern range limits. l measured several physiological variables, including basal metabolic rate (BMR), peak metabolic rate (PMR = maximal thermogenic capacity), metabolic response to varying environmental temperature (MRT), evaporative water loss (EWL), and daily energy expenditure (DEE) for summer-and winter-acclimatized Mountain Chickadees and Juniper Titmice to determine if seasonal and interspecific variation in cold tolerance and …

Evolutionary Genetics Of Canyon Treefrogs (Hyla Arenicolor), Roy A. Murray

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Population genetics is the study of the mechanisms that cause genetic change in populations over time. Genetic changes may lead to both adaptive evolution and speciation. While the former process is fairly well understood, many questions remain unanswered with regard to the process of speciation. How important is population isolation in the process of speciation? How long must populations be isolated before speciation is complete? Are the genetic changes that take place during speciation caused mainly by natural selection or does genetic drift play a substantial role? Can genetic drift alone lead to reproductive isolation? These types of questions have …

Interaction Of The Human Serine Protease Inhibitor Alpha-1-Antitrypsin With Cryptosporidium Parvum, John Russell Forney

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The human serine protease inhibitor (serpin) alpha-1-antitrypsin (AAT) was studied for potential interaction with components of the protozoan parasite Cryptosporidium parvum. A homogenate prepared from C. parvum oocysts was incubated with purified human AAT, and complexes formed between the serpin and components of the homogenate were detected using an enzyme-linked immunosorbent assay (ELISA). Serpin:parasite infections were effectively blocked by preincubating AAT with a cognate target enzyme, porcine pancreatic elastase, prior to performing the ELISA on the homogenate. Incubation of a mixture of C. parvum oocysts and sporozoites with AAT demonstrated preferential fluorescence labeling of the sporozoite surface membrane by indirect …

Competitive Interactions Between A Native And Exotic Trout Species In High Mountain Streams, Heather M. Thomas

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Populations of the introduced book trout, Salvelinus fontinalis, have recently become more widespread and abundant in western North American streams, possible at the expense of native Colorado River cutthroat trout, Oncorhynchus clarki pleuriticus. We examined the intensity and potential mechanism of competition between these species.

Feeding experiments in laboratory stream channels showed that cutthroat trout feeding efficiency decreases in the presence of a brook trout. Decreased feeding efficiency appeared to be due to interference, as cutthroat trout were inactive in the presence of the brook trout. Evidence for interference competition in the feeding experiments was also given by the …

Association Of The Major Histocompatibility Complex With Autism, Wayne W. Daniels

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The pathogenesis of autism has proven difficult to characterize. However, in many recent studies, it is suggested that the onset of this disorder is the result of multiple etiological factors, which include genetic, immunologic, and viral elements.

Possible immunological influences found in subpopulations of patients with autism include decreased lymphocyte responsiveness, reduced natural killer cell activity, abnormal response to rubella vaccine, abnormal immune response to brain tissue, and decreased plasma levels of the fourth component of complement(C4). These aberrations and others imply a possible autoimmune mechanism in some cases for the development of autism.

C4 deficiencies have been found in …

Phylogenetic Studies Of The United States Bluetongue Viruses And Characterization Of The Viral Vp4 Protein, I-Jen Huang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bluetongue virus (BTV) is transmitted by arthropod vectors and causes bluetongue disease with serious economic loss in many regions of the world. The replication mechanism of bluetongue virus is still not clear. To have a better understanding regarding the viral replication, the function of each individual protein has to be identified. This study used molecular biology techniques to investigate the function of the inner core protein VP4.

The M1 genes of United States bluetongue virus serotypes-2, -10, -11, -13, and -17 were cloned and sequenced. The length of each of the five M1 genes is 1981 nucleotides. The coding region …

In Vitro Evaluation Of Anti-Eimeria Tenella, Gamont-Specific, Monoclonal Antibodies And Partial Characterization Of Their Target Antigens, Eric Wilson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study represents an effort to interrupt the life cycle of Eimeria tenella, the parasite that causes cecal coccidiosis in chickens, with a panel of 12 gamont-specific monoclonal antibodies (Mabs). To facilitate Mab screening, it was first necessary to develop a cell culture-adapted strain of E. tenella (field strain 80) from primary chicken kidney cells (PCKC) to white Leghorn chickens and back to PCKC. This alternation was repeated through 12 such passages. As a result, we have developed a cell culture-adapted strain of E. tenella that produces over 280% more oocysts in vitro than the original parent strain, and …

Functional Study Of The Structural Vp6 Protein Of Bluetongue Virus, Emiko Hayama

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study was undertaken to investigate the structure-function relationship of VP6 protein of bluetongue virus (BTV) using molecular cloning techniques. VP6 is present in small quantities in BTV and its enzymatic activity and role in the viral replication cycle have not been studied. Since the availability of large amounts of purified VP6 is essential for the analysis of VP6, a BTV-11 S3 gene was cloned into a prokaryotic protein expression system. VP6 protein was expressed in large amounts and purified to near homogeneity. A series of C-terminal and internal deletion mutants of S3 gene was constructed and the truncated VP6 …

Phenotypic Profiles Of Lymphocytes In Adult C57bl/6n Mice Infected With Cryptosporidium Parvum, Diane Rose Bienek

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The purpose of this study was to quantitate the populations o f lymphocytes in the spleens and intestines of normal and immunosuppressed adult C57BL/6N mice that were noninfected or infected with Cryptosporidium parvum. This was accomplished by using the following methodologies: immunohistochemistry, ELISA-spot assay, and flow cytometry.

Mice in groups 1 and 2 were immunosuppressed, but only group 2 was infected. Mice in group 3 were only infected, whereas group 4 served as the normal control. Mice were immunosuppressed with dexamethasone (DEXI at a dosage of 125µg/mouse/day. Infected mice received 10⁶ oocysts per os. The numbers of lymphocytes were …

Study Of Circulating Antibodies To Heat-Shock Proteins 60 And 70 In Autistic Subjects, Fang-Yi Chiu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Autism is a behavioral syndrome characterized by a severe impairment of reciprocal social relations, and of verbal and nonverbal communications. Many different etiologic factors such as viral infection and genetic predisposition have been proposed to explain the development of this disorder. Immune abnormalities, such as a decreased lymphoblastic response to T-cell mitogen, defective antibody responses to rubella vaccine, and decreased numbers of T lymphocytes, also have been identified in a subpopulation of patients with autism, which implies that the development of autism in some cases may be due to autoimmune mechanisms.

Recent evidence suggests that immune response to the heat-shock …

Fat Content Of American Kestrels (Falco Sparverius) And Sharp-Shinned Hawks (Accipiter Striatus) Estimated By Total Body Electrical Conductivity, Shari M. Harden

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Total body electrical conductivity (TOBEC) is a noninvasive method for the estimation of lean mass in live subjects. Lipid content can be calculated from the body mass measured and the lean mass estimated from TOBEC. I used live American Kestrels (Falco sparverius) to study the accuracy of this method. TOBEC measurements were compared to actual body content determined by Soxhlet fat extraction using petroleum ether as the solvent. TOBEC estimated 73.7% of the variation in lean mass in a sample of 21 kestrels. The use of restraining devices (Vetrap and cardboard cylinders) altered the TOBEC measurement but only …

Circulating Antibodies To Thymic Antigens In Autism And Alzheimer's Disease, Chih-Li Chen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Abnormal T lymphocyte reactions in both autism and Alzheimer's disease (AD) have been reported. This research investigated the possibility that these abnormalities may involve circulating antithymic antibodies. Plasma samples from autistic patients, AD patients, and normal-matched controls were tested for reactivity against murine thymocytes.

In the first of 3 studies results of the enzyme-linked immunosorbent assay (ELISA) were statistically significant for binding (P < 0.001) between antithymic antibodies in plasmas of AD patients and murine thymocytes. Binding (P < 0.05) in low dilutions (1/2.5 and 1/5} of autistic patient plasmas was also observed. In the second study, plasmas of neither autistic nor AD patients significantly inhibited DNA synthesis of thymic cells in the presence of interleukin-1 (IL-l} and phytohemagglutinin (PHA). In the third study, no significant increases (P > 0.05) in cytotoxic activities were detected using AD patient plasmas and both untreated and heat-treated autistic patient plasmas. After further testing, these heat-treated plasmas diluted 1/64 and 1/128 had increased cytotoxicities (P < 0.05) when rabbit complement was added, an indication that cytotoxicity of antithymic antibodies is complement dependent.

Therefore, circulating antithymic antibodies may …

Biosystematics Of Seven Species Of Stipa From Southwestern United States And Northern Mexico, Penelope S. Hoge

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Two previously unidentified taxa of Stipa L. were evaluated morphologically, electrophoretically, and ecologically. The two 'new' taxa (tentatively referred to as "puzzlei" and "valdesii") were compared with five species from southwestern United States and northern Mexico (Stipa lobata Swallen, Stipa alta Swallen, Stipa scribneri Vasey, Stipa lettermanii Vasey, and Stipa nelsonii Scribner), all of which are considered to belong in the Achnatherum species-group. Anatomical and micromorphological features show that the 'new' taxa also belong in this species-group. Principal coordinate analyses of the morphological data showed that each of the seven taxa tended to occupy a …

Factors Affecting Seeds In A Sagebrush-Steppe Ecosystem And Implications For The Dispersion Of An Annual Plant Species, Cheatgrass (Bromus Tectorum L.), Michael Ira Kelrick

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I investigated how shrub-induced spatial heterogeneity influenced and was manifested by a representative ground-story plant species at a sagebrush-steppe site in southwestern Wyoming. The dispersion of cheatgrass (Bromus tectorum) reflected differences between undershrub (higher plant densities) and interspace (between shrubs, supporting lower densities) microenvironments, hence the population ecology of this annual species served as a biological probe of shrub-associated patch structure in this community. Since cheatgrass is an annual, factors affecting the seed portion of its life cycle were of special interest. First, attributes of the above- and below-ground seed pool were characterized. The environment-wide seed depositional pattern …

Reproductive Strategies Of Northern Goshawks And Cooper's Hawks In North-Central New Mexico, Patricia L. Kennedy

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I assumed that the reproductive strategies of the two Accipiter species investigated in this study, the northern Goshawk (A. gentilis) and the Cooper's hawk (A. cooperii), would be similar to the strategies of other monogamous raptors with sex role partitioning. Any differences in the species' reproductive strategies, particularly hunting strategies, were expected to be a function of their size differences. Contrary to predictions, results indicated that, in north-central New Mexico during brood rearing, both species had similar hunting strategies and utilized similar prey species. These results also indicated that the reproductive strategies of the Cooper's hawk …

Study Of Ferredoxin And Flavodoxin From Tobacco Leaves And Roots Under Normal And Iron-Stressed Conditions, I-Jen Huang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I purified tobacco leaf ferredoxin from normal and iron-stressed leaves. The oxidized form of ferredoxin from normal leaves had absorption maxima at 268, 327, and 422 nm and a shoulder at 463 nm. The oxidized form of ferredoxin from iron-stressed leaves had absorption maxima at 268 and 329 nm but no absorption maxima in the 400-nm range. Higher ferredoxin content was found with higher chlorophyll content in leaves of the same age.

A protein in tobacco root extract was isolated and found to serve as an electron carrier for ferredoxin-requiring nitrite reduction. This protein had a molecular weight and antigenic …

Immunological Effects Of Ketoconazole, Itraconazole And Fluconazole On Lymphocyte Cell Proliferation And Natural Killer Cell Activity In Immune-Normal, Cyclosporine-Compromised And Cyclophosphamide-Compromised Mouse Models, Jeffrey Tullis Mitchell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Over the past several years there has been a steady increase in the incidence of immunologically compromised patients. This has been the result of both chemical agents, such as those used in cancer chemotherapy, and biological agents such as HIV, the cause of Acquired lmmunodefeciency Syndrome (AIDS). The increase in immune-suppressed patients has lead to an increase in life-threatening mycoses requiring treatment with antifungal agents. Pharmaceutical companies have increased research for the development of new antifungal agents which are more effective and less toxic than those that are currently used. Several researchers have reported on antifungal agents that demonstrate both …

Characterization Of Anti-Pichinde Virus Monoclonal Antibodies For The Directed Delivery Of Antiviral Drugs And Toxins, Noah Jefferson Burns Iii

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mouse monoclonal antibodies directed against Pichinde virus (PCV) were produced to evaluate their application as vehicles for the delivery of antiviral drugs or toxins to virus-infected cells. Four monoclonal antibodies, PC4.9A6, PC4.9D3, PC4.7C2, and PC4.8D3, were of the IgG2a subisotype and reacted with acetone-fixed and live PCV-infected Vero-76 cells. In vivo stained splenic macrophages derived from PCV-infected hamsters that had been injected with fluorescein-labeled PC4.9A6 (FITC9A6) demonstrated a 400% increase in total fluorescence over similarly treated, non-infected cells when analyzed by flow cytometry. This is an indication that FITC-9A6 does have some ability to specifically target PCV infected cells in …

In Vitro Identification Of The Effect Of Serotonin On Lymphocyte Dna Synthesis And Natural Killer Cell Activity, Kim Kartchener Kane

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The purpose of this study was to identify the effects of the neurotransmitter, serotonin (SE), on the immune function of peripheral blood mononuclear cells (PBMC) of normal, healthy subjects. This was done as a preliminary investigation to studies on the association of SE with immune changes in autistic subjects.

The PBMC isolated from normal male subjects were treated with various concentrations of SE for 48 hrs. Their incubation in SE at a concentration of 10^-3 M induced about a 35% decrease in DNA synthesis. However, incubation of the cells in lower concentrations (10^-4 to 10^-10) of …

Effects Of Methylene Chloride On Immune Function In Mice And The In Vitro Effect Of Methylene Chloride In Immunologic Assays, Man-Ping Wang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A number of toxicities associated with methylene chloride have been found in both human subjects and mice. However, relatively few studies have probed immunotoxicities of methylene chloride. In order to examine possible immunotoxicities or immunomodulating effects of methylene chloride, several tests of cellular immune function were performed using both human in in vitro studies and a mouse model.

Body weights and specific organ weights of thymus, spleen, liver, and kidney were normal in CD-1 mice given various concentrations of methylenechloride. However, a significantly reduced mitogenic response to phytohemagglutinin (PHA} and reduced interleukin-2 (IL-2} production was found in these methylene-chloride-treated mice. …

Purification And Characterization Of A Chemically Induced Epstein-Barr Virus-Associated Deoxyribonuclease, Guang-Yuh Hwang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Purification of Epstein-Barr virus-associated deoxyribonuclease (EBV-DNase) from Raji and P₃HR-1 cells treated with 12-0-tetradecanoylphorbol-13-acetate and sodium butyrate was performed by sequential ion-exchange column chromatography and fast protein liquid chromatography. The enzyme activity, protein concentration, yield, specific activity, purification profiles, and polypeptide patterns by electrophoretic analysis in each column purification step were determined. The characteristics of the partially isolated EBV-DNase were demonstrated by the enzyme activity, DNA binding affinity, and inhibition by the nasopharyngeal carcinoma patient sera and rabbit polyclonal antibodies against the partially purified EBV-DNase. A nonisotopic assay was developed as a new method in detecting the nuclease. …

Patterns Of Singing By House Wrens With Respect To The Breeding Cycle, Michael H. Tove

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I recorded the songs and studied the reproductive behavior of a population of marked House Wrens (Troglodytes aedon) to identify patterns of singing and correlate them with behavioral contexts and stages of the breeding cycle. I found that House Wren singing could be organized into three hierarchical regimes: routine patterns of daily singing, context-specific patterns of singing and long-term fluctuations in singing rate throughout the breeding cycle. During routine daily singing, predictable structural changes occurred. Songs were clustered in discrete groups called bouts. The songs within a bout were more similar in structure than songs from different bouts. …

Studies On Encephalomyocarditis Virus-Induced Diabetes In Mice, John Henry Huffman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The D-variant of encephalomyocarditis (EMC-D) virus was given to SJL/J mice by the artificial, intraperitoneal (ip) route of infection, or by the natural routes of infection per os (po) or intranasal (i.n.), in comparable concentrations. The po route of infection was found to be ineffective. Mice given virus by either the ip or i.n. routes of infection became diabetic. Mice were more resistant to the infectious and diabetogenic properties of the virus when given by the i.n. than when given by the ip route. Glycosuria in mice given virus i.n. usually lagged one day behind that in mice given virus …

Characterization Of Esterases And Glutathione S-Transferases In A Solitary Bee, Megachile Rotundata (Fab.): Variability, Developmental Multiplicity, Substrate Specificity, And Inhibition, Donald R. Frohlich

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The esterases and glutathione S-transferases of a solitary bee, Megachile rotundata (Fab.) (Hymenoptera: Megachilidae), the alfalfa leafcutting bee, were characterized by electrophoresis, substrate specificity, and inhibition studies. Comparisons were made between ages, sexes, and life stages for several classes of substrates and their isomers: aromatic, aliphatic, and thio-esters. Two esterases were found to be allozymes and variable between individuals and sexes. Adults typically possess an esterase that hydrolyzes fluorescent substrates, an organophosphate insensitive esterase, and a series of type 'B' esterases that are very sensitive to organophosphate inhibition. Electrophoretic patterns are different between adults and immatures and are probably …

Determinants Of Small Rodent Distribution And Abundance In A Shrub-Steppe Ecosystem: Influences Of Seeds, Ants And Shrubs, Linda Suzanne Broome

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study had two major objectives; firstly to test the hypothesis of ongoing competition for seeds between small rodents and harvester ants, Pogonomyrmex occidental is, in a cold desert ecosystem; secondly to elucidate how seed abundance and shrub cover influence the distribution and abundance of deer mice, Peromyscus maniculatus. The study area was a sagebrush (Artemisia tridentata) dominated shrubsteppe in southwestern Wyoming. Responses of the small mammal community to ant removal and food addition were assessed on replicated study plots between September 1981 and September 1983. Food addition and shrub removal manipulations were continued from September 1983 …

Purification Of Anthrax Toxin Protective Antigen Component And Characterization Of Its Binding Interaction With Bovine Kidney Cells, Daniel Dalton Martin

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Protective antigen component of B. anthracis toxin was produced and purified to the >99% level. Toxin was purified from culture supernatant utilizing concentration and liquid chromatography techniques. Purity was determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis.

The purified protective antigen retained biological and antigenic activity as evidenced respectively by lethality in Fischer 344 rats when injected in combination with lethal factor, and by positive results on the Ouchterlony double diffussion assay.

Radioiodinated protective antigen was used both in the in vivo and the in vitro experiments.

In vivo distribution of labelled protective antigen was determined in Fischer 344 rats. Assay …

Detection Of Abnormal Milk With Impedance Microbiology Instrumentation, Fahad Ali Abdulghany Khayat

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mastitic milk was detected by obtaining conductance measurements using an impedance microbiology Bactometer® 120 SC instruments. Conductance readings taken after 30 min at 25'C separated normal and abnormal milks when readings differed by more than 3% from the variance among instrument module wells. Samples blended from four quarters of a cow indicated milk from one quarter was abnormal if the salt level in the abnormal quarter raised the blend conductivity above that of normal samples and variance among the wells. Either solid or liquid substrates that contained bacterial stimulants could be used to accelerate bacterial acid production or to reduce …

Hormonal Control Of Phloem Loading In Celery (Apium Graveolens L.), Mark Watts

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Previous research has indicated that phloem loading may be regulated by plant growth regulators. This conclusion, however, is based on circumstantial evidence in that previous experiments implemented complex tissue such as leaf discs or petioles to simulate phloem loading. Celery is a favorable system to measure phloem loading because it utilizes pure vascular tissue and/or isolated phloem tissue. Pure phloem tissue has not been used to date in phloem loading research.

It was demonstrated that the plant growth regulators gibberellic acid (GA₃) and indole acetic acid (IAA) caused an enhancement of sucrose-loading in vascular bundles and in isolated …