Biology Commons^™

Garter Snake (Thamnophis) Natural History: Food Habits And Interspecific Aggression, Michael J. Edgehouse

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Communication and recognition are closely intertwined and have been well documented in closely related species over the past several decades. These two types of behaviors often will aid in fostering or disrupting coexistence of similar species. Frequently, it is through different diet patterns that similar species will be able to coexist. This study uses data from 1972 through 2006 to demonstrate the diet of Thamnophis sirtalis, T. atratus, T. elegans, and T. couchii throughout their California range of sympatry with Taricha torosa. Additionally, an in depth examination of the diet of T. sirtalis, T. elegans, …

Ethylene Synthesis And Sensitivity In Crop Plants, Joseph F. Romagnano

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The gaseous plant hormone ethylene is a small molecule that regulates developmental change. Research was conducted in three areas: sensitivity, synthesis, and alterations to synthesis. Vegetative pea plants were more sensitive than radish plants to atmospheric ethylene. Light intensity did not affect ethylene sensitivity. Ethylene synthesis rates were measured for unstressed cotton, corn, soybean, and tomato plants. The per-plant ethylene synthesis rate ranged from 0.1-80 pmol plant^-1 s^-1. However, when normalized to net photosynthetic rate, this range was 1-4 µmol of ethylene synthesis per mol of CO₂ uptake. Diurnal cycles in ethylene synthesis were present in …

Combining Environmental History And Soil Phytolith Analysis At The City Of Rocks National Reserve: Developing New Methods In Historical Ecology, Lesley Morris

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Historical ecology is an emerging and interdisciplinary field that seeks to explain the changes in ecosystems over time through a synthesis of information derived from human records and biological data. The methods in historical ecology cover a wide range of temporal and spatial scales. However, methods for the more recent past (about 200 years) are largely limited to the human archive and dendrochronological evidence which can be subject to human bias, limited in spatial extent or not appropriate for non-forested systems. There is a need to explore new methods by which biological data can be used to understand historic vegetation …

Evolutionary Genetics Of Tetrodotoxin (Ttx) Resistance In Snakes: Tracking A Feeding Adaptation From Populations Through Clades, Chris R. Feldman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Understanding the nature of adaptive evolution has been the recent focus of research detailing the genetic basis of adaptation and theoretical work describing the mechanics of adaptive evolution. Nevertheless, key questions regarding the process of adaptive evolution remain. Ultimately, a detailed description of the ecological context, evolutionary history, and genetic basis of adaptations is required to advance our understanding of adaptive evolution. To address some of the contemporary issues surrounding adaptive evolution, I examine phenotypic and genotypic changes in a snake feeding adaptation.

Adaptations can arise through fixation of novel mutations or recruitment of existing variation. Some populations of the …

Reproductive Tactics Of Aphidophagous Lady Beetles: Comparison Of A Native Species And An Invasive Species That Is Displacing It, Yukie Kajita

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Coccinella septempunctata L. (Coleoptera: Coccinellidae) has been introduced to North America in recent decades, raising concerns of adverse impacts on native lady beetles, including the congeneric C. transversoguttata richardsoni (Brown). The central focus of my dissertation is to understand the importance of reproduction, in particular, in promoting invasion of C. septempunctata and its replacement of native lady beetles in alfalfa fields of western North America.

Studies were conducted to compare reproductive tactics of the invasive C. septempunctata and the native C. transversoguttata, by addressing: 1) maximum rate of reproduction of overwintered lady beetles, 2) population dynamics of the invasive …

Diets Of Ladybird Beetles (Coleoptera: Coccinellidae) In Utah Alfalfa Fields, Lynette Nicole Davidson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Aphidophagous lady beetles rely on multiple sources of food in their environment. Alfalfa fields provide both aphids and many alternate foods, such as other arthropod prey, pollen, and fungi. Alfalfa fields (Medicago sativa L.) in Utah have low aphid densities, which may require lady beetles to consume alternative sources of food. Many methods can be used to determine these diets; frass analysis is used here to compare the diets of the introduced species Coccinella septempunctata L. with two native species, C. transversoguttata richardsoni Brown and Hippodamia convergens Guérin-Méneville, that occur in the Utah alfalfa habitat.

In initial laboratory experiments …

A Conceptual Framework For Understanding Effects Of Wildlife Water Developments In The Western United States, Randy T. Larsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Free water can be a limiting factor to wildlife in arid regions of the world. In the western United States, management agencies have installed numerous, expensive wildlife water developments (e.g. catchments, guzzlers, wells) to: 1) increase the distribution or density of target species, 2) influence animal movements, and 3) mitigate for the loss of available free water. Despite over 50 years as an active management practice, water developments have become controversial for several species. We lack an integrated understanding of the ways free water influences animal populations. In particular, we have not meshed understanding of evolutionary adaptations that reduce the …

Phenotypic Plasticity And The Post-Modern Synthesis: Integrating Evo-Devo And Quantitative Genetics In Theoretical And Empirical Studies, Alison G. Scoville

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mainstream evolutionary biology lacks a mature theory of phenotype. Following from the Modern Synthesis, researchers tend to assume an unrealistically simple mapping of genotype to phenotype, or else trust that the complexities of developmental architecture can be adequately captured by measuring trait variances and covariances. In contrast, the growing field of evolutionary developmental biology (evo-devo) explicitly examines the relationship between developmental architecture and evolutionary change, but lacks a rigorous quantitative and predictive framework. In my dissertation, I strive to integrate quantitative genetics and evo-devo, using both theoretical and empirical studies of plasticity. My first paper explores the effect of realistic …

Disturbance As Restoration In The Intermountain Sagebrush Steppe: Effects On Non Target Bird Species, Russell Edward Norvell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Changes in shrubsteppe passerine bird habitat associations in response to disturbance were investigated at multiple temporal and spatial scales. Spatial measures incorporated the effects of area at different ecological scales (nest site, territory, and landscape) to include ecologically meaningful extents. Temporal measures included seasonal and annual effects, and were designed to detect lagged responses should they occur. Local-to-landscape scale effects of mechanical restoration treatments on local extirpation and abundances of nine species indicated most were insensitive to changes in habitat quality, while abundance models showed only broad declines. Changing the availability of nesting habitat on both the attractiveness and quality …

An Investigation Of The Early Life-History Of Brown Trout (Salmo Trutta) And Potential Influences On Invasion Success In The Logan River, Utah, Jeremiah Wood

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Due to the significant threats posed by nonnative fish species worldwide, it is important to understand how life-history strategies of individual species interact with environmental conditions to explain the success or failure of nonnative fish invasions. Brown trout are prolific invaders, but often exhibit upstream distributional limits in Intermountain West streams, potentially due to a maladaptive reproductive life-history strategy influenced by hydrologic conditions in high-elevation areas. We used redd counts, egg survival experiments, and temperature modeling to investigate the reproductive life-history strategy of brown trout and its potential for success along an elevational stream gradient. We documented brown trout spawning …

Ponderosa Pine Mortality And Bark Beetle-Host Dynamics Following Prescribed And Wildland Fires In The Northern Rocky Mountains, Usa, Ryan Stephen Davis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Ponderosa pine delayed mortality, and bark beetle attacks and emergence were monitored on 459 trees for 3 years following one prescribed fire in Idaho and one wildland fire in Montana. Resin flow volume (ml) was measured on 145 fire-injured ponderosa pine 2 and 3 years post-fire. Logistic regression was used to construct two predictive ponderosa pine mortality models, and two predictive bark beetle-attack models. Post-fire delayed tree mortality was greater with the presence of primary bark beetles independent of diameter at breast height (DBH) (cm), and was greater in smaller diameter trees most likely due to direct effects of fire-caused …

Conservation Implications Of Winter-Feeding Policies For Mule Deer In Utah, Chris C. Peterson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Policies regulating wildlife winter-feeding programs may have long-term impacts on conservation and future management of both target and non-target species. In 2000, the Utah Wildlife Board, upon reviewing input from a series of public regional meetings, adopted a Utah Big Game Winter-Feeding Policy. The Utah Division of Wildlife Resources used this policy to regulate winter-feeding programs for mule deer in northern Utah, 2001-2005. I monitored the program effects on mule deer biology, activity and migration, and winter browse utilization and productivity.

While feed rations generally compensated for protein and energy deficiencies, they may overlook mineral deficiencies. To determine if mule …

Reproductive Biology Of The Coyote (Canis Latrans): Integration Of Behavior And Physiology, Debra Anne Carlson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Wild Canis species possess a unique suite of reproductive traits including social monogamy, copulatory lock/tie, and biparental care. Females are seasonally monestrous and experience an obligatory pseudopregnancy after spontaneous ovulation. While these characteristics have been ascribed to coyotes, an integrated profile of behavior and physiology has not yet been described. In this study, temporal correlations between steroid hormone levels and socio-sexual mating behaviors were documented, as were changes in vaginal epithelium. Pseudopregnancy was compared to pregnancy by contrasting hormone (progesterone, estradiol, prolactin and relaxin) profiles of unmated females to patterns obtained in alternate years when they bred. Meanwhile, social interactions …

Granivores And Restoration: Implications Of Invasion And Considerations Of Context-Dependent Seed Removal, Steven M. Ostoja

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Granivores are important components of sagebrush communities in western North America. These same regions are being altered by the invasion of the exotic annual Bromus tectorum (cheatgrass) that alters physical and biological dynamics in ways that appear to promote its persistence. This research directly relates to the restoration of B. tectorum-dominated systems in two inter-related ways. First, because these landscapes have large quantities of seeds applied during restoration, it is important to determine the major granivore communities in intact sagebrush communities and in nearby cheatgrass-dominated communities. Second, it is important to develop an understanding of patterns of seed harvest …

Breeding Behavior And Space Use Of Male And Female Mule Deer: An Examination Of Potential Risk Differences For Chronic Wasting Disease Infection, Leslie R. Mcfarlane

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The dynamics of pathogen and host relationships relative to disease transmission in wildlife populations are important ecological processes to understand, particularly since spatial dynamics of disease can be driven by movement, behavior, and dispersal of animals. Chronic Wasting Disease (CWD) is an example of this important interface, where little is known regarding origin of the disease or routes of transmission. Surveillance data for CWD in free-ranging mule deer indicates that breeding-age male deer have 2-4 times higher prevalence rates than females or younger age males. In an effort to understand differences that might increase risk for exposure to CWD infective …

Identification Of Factors Affecting Bovine Somatic Cell Nuclear Transfer Efficiency And Characterization Of Transcriptional Profiles Of Nuclear Transfer Embryos And Cotyledons, Kenneth Ivan Aston

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Since the production of the first sheep by somatic cell nuclear transfer a great deal of effort has been made to improve efficiency and to understand nuclear reprogramming mechanisms. Unfortunately efficiency remains low, and nuclear reprogramming mechanisms remain uncharacterized. The objectives of this research were to identify factors associated with somatic cell nuclear transfer efficiency and to analyze the transcriptome of blastocyst-stage clone and control embryos and cotyledonary tissue in an effort to elucidate mechanisms responsible for the low developmental efficiency and high post-implantation losses.

The experiments reported here identify factors including oocyte source and timing of activation following nuclear …

Historical Biogeography Of North American Nightsnakes And Their Relationships Among The Dipsadines: Evidence For Vicariance Associated With Miocene Formations Of Northwestern Mexico, Daniel G. Mulcahy

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I used a hierarchical approach to study historical biogeography in a group of colubrid snakes found in western North America. I combined small regions of mtDNA sequence data from a large number of individuals, with complete mt-genomic data. First, I investigated the relationships among leptodeirines—a presumed subgroup of dipsadines, including nightsnakes (Pseudoleptodeira, Eridiphas, and Hypsiglena)—using ~1.5 kb of data (cob and nad4). The relationships differed among parsimony, likelihood, and Bayesian analyses. All analyses supported the monophyly of the nightsnakes; however, none supported the monophyly of the leptodeirines. Instead, these data supported a new hypothesis …

Host Shifts In Phytophagous Insects: A Mathematical Modeling Perspective, Meenakshi Venkataraman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I explored changes in predator-prey system stability with the addition of spatial heterogeneity in prey density dependent mortality. The results indicated that this addition led to greater stability for all prey spatial distributions if prey was aggregated or loosely aggregated. These results indicated prey spatial distribution was critical to population stability. I next explored whether predator emigration under the above conditions would lead to a host shift. I used Chesson and Murdoch's templates of host density independent (HDI) aggregation and host density dependent (HDD) aggregation in predators as the basis for my metapopulation models. I varied prey density dependent mortality …

Natural History, Demography, And Home Range Characteristics Of A Southern California Population Of Phrynosoma Mcallii Inhabiting Atypical Habitat, Kirk Setser

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Phrynosoma mcallii inhabiting a topographically complex, sparsely vegetated, "mudhill" terrain site in southern California in 1999 and 2000 had low mortality rates, and small clutch sizes compared to previous data from this species. Females likely produced a single clutch of eggs in each year. Although this population occurs near a heavily used OHV trail, I did not detect any mortality due to OHV use.

Lizards did not center home ranges on obvious habitat features. Lizards maintained smaller home ranges and exhibited greater range fidelity than did lizards at other sites in other years. Phrynosoma mcallii share many area-use characters with …

Using Immune Modulators To Ameliorate Aleutian Disease In Mink, Kie Hoon Jung

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Aleutian disease of mink (AD) is an immunopathological disorder induced by persistent infection with AD virus. Many breeds of mink seem to have a high susceptibility to AD. Interestingly, the primary feature of AD in susceptible adult mink is a chronic, fatal immune complex-mediated glomerulonephritis comparable to that seen in human diseases such as systemic lupus erythematosus. Because of its comparative aspects to human diseases and the substantial economic loss to the fur industries in the world, classical AD and the nature of the virus has been studied extensively for three decades. Currently no therapies are available and vaccination has …

The Foraging Behavior Of A Solitary Bee, Diadasia Nigrifrons (Hymenoptera: Anthophoridae) On Sidalcea Oregana, Ssp. Oregana, Kimberly A. Kuta

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Foraging studies have established that bees typically obey a set of movement rules when foraging on vertical inflorescences: they begin foraging at the bottom of an inflorescence, move upward, visit a fraction of the available flowers, and leave before reaching the top of the inflorescence. These behaviors are purported to maximize bee foraging efficiency by concentrating their efforts on the most rewarding flowers and minimizing flower revisits. Bees also increase their efficiency by selecting inflorescences with many flowers, visiting more flowers per inflorescence, and remaining in resource-rich areas. To test these hypotheses on plants with more complicated flower arrangements, I …

Statmod: A Tool For Interfacing Arcview® Gis With Statistical Software To Facilitate Predictive Ecological Modeling, Christine M. Garrard

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

As geographical information systems and spatial data become more accessible, predictive spatial modeling in ecology is becoming more common. Unfortunately, not all ecologists possess the necessary skills to successfully combine statistical models and geographical information systems. In response to this problem, I wrote an extension for ArcView^® GIS called StatMod. This extension interfaces ArcView GIS with SAS^® and S-PLUS^® statistical software and walks the user through creating and mapping logistic regression and classification and regression tree models.

StatMod was then used to run a series of analyses that would have been difficult without such a tool. A …

Analyses Of Diet And Geographic Variation In Leaf-Nosed Snakes, Phyllorhynchus, Stephanie A. Gardner

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study revealed that P. decurtatus primarily eat squamate eggs, and that the diet of P. browni appears to consist entirely of squamate eggs; gecko tails constitute a very small proportion of the diet of P. decurtatus. Feeding in both species occurred throughout their active seasons and both species increased prey consumption in August. The sexes of P. browni, but not P. decurtatus showed different monthly feeding patterns. Desert-of-collection did not affect P. decurtatus monthly feeding patterns. Phyllorhynchus decurtatus collected from the Sonoran Desert and P. browni, which is found only in the Sonoran Desert, showed similar …

Patterns And Processes Of Population Differentiation In The Chuckwalla (Sauromalus Obesus) In Southern Nevada, Paul C. Ustach

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I examined both present-day and historical patterns in the herbivorous desert lizard, Sauromalus obesus (chuckwalla), within the Mojave Desert ecoregion in Nevada. My goal was to determine the process or processes that led to their present-day distribution. I expected to recover distinct haplotypes unique to each mountain range. These unique haplotypes were expected to reveal a pattern of geographic partitioning with sequence divergence among populations increasing as a function of distance. I characterized the distribution of chuckwallas in Nevada by means of a simple model using a geographic information system (GIS). This simple model was used to enhance sampling efficiency …

Genetic Relationships Between Two Rare Plant Species, Aliciella Caespitosa And A. Tenuis, And Their Putative Progenitor, A. Subnuda, Carrie L. Mccracken

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Isolated populations have potential to become new species that should have less genetic variation than their ancestors. Small populations are more likely to lose genetic variation, which is, thus, expected to be greater in ancestors. Aliciella caespitosa and A. tenuis, two endemic species, may be derived from small populations of A. subnuda, a widespread species. Chloroplast DNA sequences were used to test this hypothesis. Allozyme data were used to compare genetic variation and numbers of alleles. Chloroplast data do not support the proposed relationships between A. subnuda and the other two species. Allozyme data were not more variable …

Altered T Cell-Mediated Immunity And Infectious Factors In Autism, Yong Hu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Three major questions were addressed in this dissertation: 1) Do immune abnormalities associated with autism primarily alter CD4+ T cell-mediated or humoral immune responses? 2) Are specific T cell clones expanded in autism? 3) Which, if any, infectious agents play a role in autism?

CD4+ T cell-mediated (Th1) or humoral (Th2) immune responses can be distinguished on the basis of the cytokines expressed. CD4+ T-cells secrete interleukin type 2 (IL-2) and interferon-γ, whereas a Th2 response is associated with secretion of interleukin type 4(IL-4). mRNA extracted from peripheral blood mononuclear nuclear cells (PBMC) showed significantly increased levels of IL-2 and …

Predictively Mapping The Plant Associations Of The North Fork John Day Wilderness In Northeastern Oregon Using Classification Tree Modeling, Alison M. Kelly

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Shifting perspectives on restoration and management of public lands in the inland West have resulted in an increased need for maps of potential natural vegetation which cover large areas at sufficient scale to delineate individual stands. In this study, classification tree modeling was used to predictively model and map the plant association types of a relatively undisturbed wilderness area in the Blue Mountains of northeastern Oregon. Models were developed using field data and data derived from a geographic information system database. Elevation, slope, aspect, annual precipitation, solar radiation, soil type, and topographic position were important predictor variables. The model predicted …

Home Range (?) Of The Flat-Tailed Horned Lizard Phrynosoma Mcallii, Peggy Anderson Miller

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Area used by male and female Phrynosoma mcallii (Hallowell) was studied in a population located on the Barry M. Goldwater Aerial Gunnery Range near Yuma, Arizona. Area used by males and females shifted through time and did not fit the definition of home range. Summer male and female area used was not significantly different (F=2.625, df=1, P=0.131), but male areas used were significantly larger for 15-day time periods (F=9.67, P=0.0003). Males overlapped the area they occupied in consecutive 15-day time periods more often than did females. Female area used never overlapped within a 15-day time period. Male area used overlapped …

The Reproductive Biology And Edaphic Characteristics Of A Rare, Gynodioecious Saxifage: Saxifraga Bryophora Var. Tobiasiae (Saxifragaceae), Kimberly Pierson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I examined the reproductive biology and general ecology of Saxifraga bryophora var. tobiasiae, a rare saxifrage endemic to the West Salmon River Mountains of central Idaho. Saxifraga bryophora var. tobiasiae combines asexual reproduction via bulbils with a sexual mixed-mating system. Flower production occurred in 1996 only, whereas bulbil production occurred in 1995, 1996, and 1997. Bulbil production precedes floral bud formation and is the dominant form of reproduction. When flowering occurs, outcrossing is promoted by protandry and the gynodioecious mating system found in all populations. No autogamous or agamospermous seed set was observed in either female or hermaphrodite flowers, …

Interaction Between Winter Dominance And Territory Defense In Male Pronghorn Antelope, Antilocapra Americana, Charles William Gunnels Iv

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In a territorial population of pronghorn from Antelope Island, UT, interaction between male dominance and territory defense was examined. High-ranking males were more likely to defend territories. Closely ranked animals engaged in more dominance interactions than distantly ranked individuals, and middle-ranked animals were involved in disproportionately more interactions than either high- or low-ranking animals. Large males possessed large horns and prongs as well as small cheek patches. Results from a factor analysis suggested that large males defended territories with a high density of sage. However, in this study, we did not observe pronghorn feed on sage during the territorial season. …