Biology Commons^™

Remotely Sensed Canopy Nitrogen Correlates With Nitrous Oxide Emissions In A Lowland Tropical Rainforest, Fiona M. Soper, Benjamin W. Sullivan, Megan K. Nasto, Brooke B. Osborne, David Bru, Christopher S. Balzotti, Phillip G. Taylor, Gregory P. Asner, Alan R. Townsend, Laurent Philippot, Stephen Porder, Cory C. Cleveland

Biology Faculty Publications

Tropical forests exhibit significant heterogeneity in plant functional and chemical traits that may contribute to spatial patterns of key soil biogeochemical processes, such as carbon storage and greenhouse gas emissions. Although tropical forests are the largest ecosystem source of nitrous oxide (N2O), drivers of spatial patterns within forests are poorly resolved. Here, we show that local variation in canopy foliar N, mapped by remote‐sensing image spectroscopy, correlates with patterns of soil N2O emission from a lowland tropical rainforest. We identified ten 0.25 ha plots (assemblages of 40–70 individual trees) in which average remotely‐sensed canopy N fell above or below the …

High Dispersal Ability Is Related To Fast Life-History Strategies, Noelle G. Beckman, James M. Bullock, Roberto Salguero-Gomez

Ecology Center Publications

1. Seed dispersal is an essential, yet often overlooked process in plant ecology and evolution, affecting adaptation capacity, population persistence and invasiveness. A species’ ability to disperse is expected to covary with other life-history traits to form dispersal syndromes. Dispersal might be linked to the rate of life history, fecundity or generation time, depending on the relative selection pressures of bethedging, kin competition or maintaining gene flow. However, the linkage between dispersal and plant life-history strategies remains unknown because it is difficult to observe, quantify and manipulate the influence of dispersal over large spatiotemporal scales.

2. We integrate datasets describing …

Optical Fluorescent Spider Silk Electrospun Nanofibers With Embedded Cerium Oxide Nanoparticles, Ishac Kandas, Nader Shehata, Ibrahim Hassounah, Patrik Sobolciak, Igor Krupa, Randolph V. Lewis

Biology Faculty Publications

The work demonstrates an electrospun nanocomposite of recombinant spider silk protein (rSSp) nanofibers with embedded cerium oxide (ceria) nanoparticles. RSSP (MaSp1) has been produced, extracted from goat milk, and fabricated into nanofibers using an electrospinning process. The resulting electrospun nanofibers have a mean diameter of ∼50  nm. Furthermore, ceria nanoparticles of mean diameterions, associated with formed oxygen vacancies. The formed nanocomposite shows promising mechanical properties such as the Young’s modulus, elasticity (or elongation at break), and toughness. In addition, the electrospun mat becomes fluorescent with 520-nm emission upon exposure to UV light, due to excitation of the optically active ceria …

Investigating The Viral Ecology Of Global Bee Communities With High-Throughput Metagenomics, David A. Galbraith, Zachary L. Fuller, Allyson M. Ray, Axel Brockmann, Maryann Frazier, Mary W. Gikungu, J. Francisco Iturralde Martinez, Karen M. Kapheim, Jeffrey T. Kerby, Sarah D. Kocher, Oleksiy Losyev, Elliud Muli, Harland M. Patch, Cristina Rosa, Joyce M. Sakamoto, Scott Stanley, Anthony D. Vaudo, Christina M. Grozinger

Biology Faculty Publications

Bee viral ecology is a fascinating emerging area of research: viruses exert a range of effects on their hosts, exacerbate the impacts of other environmental stressors, and, importantly, are readily shared across multiple bee species in a community. However, our understanding of bee viral communities is limited, as it is primarily derived from studies of North American and European Apis mellifera populations. Here, we examined viruses in populations of A. mellifera and 11 other bee species from 9 countries, across 5 continents and Oceania. We developed a novel pipeline to rapidly, inexpensively, and robustly screen for bee viruses. This pipeline …

Electrospun Pva Polymer Embedded With Ceria Nanoparticles As Silicon Solar Cells Rear Surface Coaters For Efficiency Improvement, Effat Samir, Mohamed Salah, Ali Hajjiah, Nader Shehata, Marwa Fathy, Aya Hamed

Biology Faculty Publications

This paper introduces electrospun nanofibers embedded with ceria nanoparticles as silicon solar cells coaters, showing their influence on the solar cells efficiency. Ceria nanoparticles can be synthesized to have formed oxygen vacancies (O-vacancies), which are associated with converting cerium ions from the Ce4+ state ions to the Ce3+ ones. These O-vacancies follow the rule of improving silicon solar cellconductivity through the hopping mechanism. Besides, under violet excitation, the reduced trivalent cerium Ce3+ ions are directly responsible for down-converting the un-absorbed violet or ultra-violet (UV) wavelengths to a resulted green fluorescence emission at ~520 nm. These are absorbed through the silicon …

Partnering With A Pest: Genomes Of Hemlock Woolly Adelgid Symbionts Reveal Atypical Nutritional Provisioning Patterns In Dual-Obligate Bacteria, Kathryn M. Weglarz, Nathan P. Havill, Gaelen R. Burke, Carol D. Von Dohlen

Biology Faculty Publications

Nutritional bacterial symbionts enhance the diets of sap-feeding insects with amino acids and vitamins missing from their diets. In many lineages, an ancestral senior symbiont is joined by a younger junior symbiont. To date, an emergent pattern is that senior symbionts supply a majority of amino acids, and junior symbionts supply a minority. Similar to other hemipterans, adelgids harbor obligate symbionts, but have higher diversity of bacterial associates, suggesting a history of symbiont turnover. The metabolic roles of dual symbionts in adelgids and their contributions to the consortium are largely unexplored. Here, we investigate the symbionts of Adelges tsugae, …

Sensitive High-Frequency Hearing In Earless And Partially Eared Harlequin Frogs (Atelopus), Molly C. Womack, Jakob Christensen-Dalsgaard, Luis A. Coloma, Kim L. Hoke

Biology Faculty Publications

Harlequin frogs, genus Atelopus, communicate at high frequencies despite most species lacking a complete tympanic middle ear that facilitates high-frequency hearing in most anurans and other tetrapods. Here, we tested whether Atelopus are better at sensing high-frequency acoustic sound compared with other eared and earless species in the Bufonidae family, determined whether middle ear variation within Atelopus affects hearing sensitivity and tested potential hearing mechanisms in Atelopus. We determined that at high frequencies (2000‚Äì4000‚ÄÖHz), Atelopus are 10‚Äì34‚ÄÖdB more sensitive than other earless bufonids but are relatively insensitive to mid-range frequencies (900‚Äì1500‚ÄÖHz) compared with eared bufonids. Hearing among Atelopus species is …

Lanthanide-Doped Ceria Nanoparticles As Backside Coaters To Improve Silicon Solar Cell Efficiency, Ali Hajjiah, Effat Samir, Nader Shehata, Mohamed Salah

Biology Faculty Publications

This paper introduces lanthanide-doped ceria nanoparticles as silicon solar cell back-side coaters, showing their influence on the solar cell efficiency. Ceria nanoparticles can be synthesized to have formed oxygen vacancies (O-vacancies), which are associated with converting cerium ions from the Ce⁴⁺ state ions to the Ce³⁺ ones. These O-vacancies follow the rule of improving silicon solar cell conductivity through a hopping mechanism. Besides, under near-ultra violet (near-UV) excitation, the reduced trivalent cerium Ce³⁺ ions are directly responsible for down converting the un-absorbed UV wavelengths to a resultant green photo-luminescence emission at ~520 nm, which is absorbed through …

The Truncated Bell: An Enigmatic But Pervasive Elevational Diversity Pattern In Middle American Ants, John T. Longino, Michael G. Branstetter

All PIRU Publications

Studies on elevation gradients in Panama and Costa Rica have shown that leaf-litter ants exhibit a mid-elevation peak in diversity. This diversity pattern has been observed in other groups and regions, but uncertainty remains as to just how pervasive it is and what might explain it. Here we examine the robustness of the mid-elevation peak in ant diversity across the entire Middle American corridor, from Veracruz, Mexico, to Costa Rica. We sampled 56 sites distributed throughout Middle America. All were in closed-canopy evergreen wet forest, spanning 11° latitude, from near sea level to 2600 m elevation. Ants were extracted from …

The Indestructible Insect: Velvet Ants From Across The United States Avoid Predation By Representatives From All Major Tetrapod Clades, Brian G. Gall, Kari L. Spivey, Trevor L. Chapman, Robert J. Delph, Edmund D. Brodie Jr., Joseph S. Wilson

Biology Faculty Publications

Velvet ants are a group of parasitic wasps that are well known for a suite of defensive adaptations including bright coloration and a formidable sting. While these adaptations are presumed to function in antipredator defense, observations between potential predators and this group are lacking. We conducted a series of experiments to determine the risk of velvet ants to a host of potential predators including amphibians, reptiles, birds, and small mammals. Velvet ants from across the United States were tested with predator’s representative of the velvet ants native range. All interactions between lizards, free-ranging birds, and a mole resulted in the …

Target Sequence Capture Of Nuclear-Encoded Genes For Phylogenetic Analysis In Ferns, Paul G. Wolf, Tanner A. Robison, Matthew G. Johnson, Michael A. Sundue, Weston L. Testo, Carl J. Rothfels

Biology Faculty Publications

Premise of the Study

Until recently, most phylogenetic studies of ferns were based on chloroplast genes. Evolutionary inferences based on these data can be incomplete because the characters are from a single linkage group and are uniparentally inherited. These limitations are particularly acute in studies of hybridization, which is prevalent in ferns; fern hybrids are common and ferns are able to hybridize across highly diverged lineages, up to 60 million years since divergence in one documented case. However, it not yet clear what effect such hybridization has on fern evolution, in part due to a paucity of available biparentally inherited …

Maternal Vitamin D Deficiency And Early Childhood Health Outcomes Including Autism Development, Kelsey L. Girardelli

Undergraduate Honors Capstone Projects

Many studies have shown that vitamin D deficiency during pregnancy is associated with a variety of adverse maternal and pediatric outcomes. Disease outcomes that have been observed in pregnant women who are vitamin D deficient include increased risk of C-section, preeclampsia, bacterial vaginosis, and gestational diabetes. In children born to deficient mothers, increased rates of childhood asthma, type 1 diabetes, low birthweight, and autism spectrum disorder (ASD) have been observed. Although there is much evidence to support these correlations, much is yet to be understood regarding the etiology of these outcomes. This paper specifically examines the relationships between risk factors …

Evaluation Of Antiviral Agents In Two Mouse Models Of Rna Virus Infections, John Hyrum Mcclatchy

Undergraduate Honors Capstone Projects

The first model we are evaluating is human influenza virus in mice. Influenza virus is a negative sense RNA virus, which the CDC estimates causes between 9.2 million and 35.6 million illnesses each year in the United States.^[1] In the current influenza season, H3N2 viruses have been the predominant subclade of influenza A virus in circulation.^[2] Development of a mouse model for influenza H3N2 virus infection has been difficult. In these studies, we endeavored to mouse-adapt influenza A/Hong Kong/4801/2014 H3N2 virus by serial passaging in AG129 mice. This virus strain was chosen as it overlaps in serotype with …

Characterization Of Black Walnut Genotypes For Resistance To Thousand Cankers Disease, Frost Hardiness And Other Desirable Horticultural Traits, J. Elisa Lauritzen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The black walnut, Juglans nigra L., is native to the United States (USA) and is a valuable timber and nut tree. Just before the beginning of the 21st century, several western states observed a decline in the health and, later, death of black walnut trees. The pathogen-vector complex now known as thousand cankers disease (TCD) was shown to be the cause. The disease, caused by Geosmithia morbida Kolařik, is vectored by the walnut twig beetle (WTB), Pityophthorus juglandis Blackman. Thousands of WTB will swarm and enter a tree vectoring the fungus at each entry point where cankers then develop, quickly …

The Effect Of Gender And Socioeconomic Status On Concussion Reporting Behavior Among Ncaa Student-Athletes, Joshua Anthony Hansen

Undergraduate Honors Capstone Projects

Concussions are traumatic brain injuries that result from "brain shaking" that can occur during any situation that transmits force to the head. Concussions are defined as a clinical syndrome characterized by immediate and transient post-traumatic impairment of neural functions which lead to a complex grouping of both psychological and physiological symptoms (McCrory, et al., 2013). As knowledge of the long-term implications of these injuries grows, concussions are becoming more of a major health concern worldwide. One subset of concussion classifications, sports-related concussions, is receiving an increasing amount of attention from both scientists and health-care practitioners. It is estimated that more …

Breeding Season Ecology And Demography Of Lesser Scaup (Aythya Affinis) At Red Rock Lakes National Wildlife Refuge, Jeffrey M. Warren

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

It is hypothesized that individuals make reproductive decisions based on current assessments of their physiological condition and environmental conditions. For female lesser scaup (Aythya affinis), breeding occurs after an energetically costly spring migration. Increasing fat reserves (i.e., ‘body condition’) prior to breeding allows a female to produce a larger clutch of eggs, but time spent gaining body condition is costly in terms of time allowed to raise ducklings before freezing conditions in the fall. In Chapter 2 I explored rate of pre-breeding body condition gain in female lesser scaup, and how that rate influenced clutch size. Spring phenology, …

Historical Biogeography And Natural History Of Nocturnal Wasps In The Southwestern Deserts With Special Emphasis On The Genus Chyphotes (Hymenoptera: Chyphotidae), Emily A. Sadler

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Deserts are interesting places due to the large number of plants and animals that live there. Nocturnal wasps are extremely abundant in deserts, but they are difficult to identify and their life cycles are not well known especially the families of Chyphotidae, Tiphiidae (Brachycistidinae), and Mutillidae (velvet ants). In this dissertation, I determine how to correctly identify a particularly difficult group of species that all have black heads from the family Chyphotidae. This is important because these species make up a large proportion of specimens collected. Also, I expanded our knowledge on the distribution of the species of these three …

Phenology Of A Southern Population Of Mountain Pine Beetle (Dendroctonus Ponderosae), Anne Elise Mcmanis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mountain pine beetle (Dendroctonus ponderosae, Hopkins) is a major disturbance agent in pine ecosystems of western North America. Adaptation to local climates has resulted in primarily univoltine (one generation per year) generation timing across a thermally diverse latitudinal gradient. We hypothesized that this pattern in total development time is shaped by selection for slower developmental rates, altered developmental thresholds, or oviposition rates in southern populations inhabiting warmer climates. To investigate traits responsible for latitudinal differences we measured lifestage-specific development of southern mountain pine beetle eggs, larvae and pupae across a range of temperatures. We also describe and model …

Admixture, Evolution, And Variation In Reproductive Isolation In The Boechera Puberula Clade, Martin P. Schilling, Zachariah Gompert, Fay-Wei Li, Michael D. Windham, Paul G. Wolf

Biology Faculty Publications

Background

Hybridization is very common in plants, and the incorporation of new alleles into existing lineages (i.e. admixture) can blur species boundaries. However, admixture also has the potential to increase standing genetic variation. With new sequencing methods, we can now study admixture and reproductive isolation at a much finer scale than in the past. The genus Boechera is an extraordinary example of admixture, with over 400 hybrid derivates of varying ploidy levels. Yet, few studies have assessed admixture in this genus on a genomic scale.

Results

In this study, we used Genotyping-by-Sequencing (GBS) to clarify the evolution of the Boechera …

Gymnosperms On The Edge, Félix Forest, Justin Moat, Elisabeth Baloch, Neil A. Brummitt, Steve P. Bachman, Steffi Ickert-Bond, Peter M. Hollingsworth, Aaron Liston, Damon P. Little, Sarah Mathews, Hardeep Rai, Catarina Rydin, Dennis W. Stevenson, Philip Thomas, Sven Buerki

Wildland Resources Faculty Publications

Driven by limited resources and a sense of urgency, the prioritization of species for conservation has been a persistent concern in conservation science. Gymnosperms (comprising ginkgo, conifers, cycads, and gnetophytes) are one of the most threatened groups of living organisms, with 40% of the species at high risk of extinction, about twice as many as the most recent estimates for all plants (i.e. 21.4%). This high proportion of species facing extinction highlights the urgent action required to secure their future through an objective prioritization approach. The Evolutionary Distinct and Globally Endangered (EDGE) method rapidly ranks species based on their evolutionary …

Routes Of Pesticide Exposure In Solitary, Cavity-Nesting Bees, Andi M. Kopit, Theresa L. Pitts-Singer

Biology Faculty Publications

Declines of pollinator health and their populations continue to be commercial and ecological concerns. Agricultural practices, such as the use of agrochemicals, are among factors attributed to honey bee (Apis mellifera L. (Hymenoptera: Apidae)) population losses and are also known to have negative effects on populations of managed non-Apis pollinators. Although pesticide registration routinely requires evaluation of impacts on honey bees, studies of this social species may not reveal important pesticide exposure routes where managed, solitary bees are commonly used. Studies of solitary bees offer additional bee models that are practical from the aspect of availability, known rearing …

The Natural Variance Of The Arabidopsis Floral Secondary Metabolome, Takayuki Tohge, Monica Borghi, Alisdair R. Fernie

Biology Faculty Publications

Application of mass spectrometry-based metabolomics enables the detection of genotype-related natural variance in metabolism. Differences in secondary metabolite composition of flowers of 64 Arabidopsis thaliana (Arabidopsis) natural accessions, representing a considerable portion of the natural variation in this species are presented. The raw metabolomic data of the accessions and reference extracts derived from flavonoid knockout mutants have been deposited in the MetaboLights database. Additionally, summary tables of floral secondary metabolite data are presented in this article to enable efficient re-use of the dataset either in metabolomics cross-study comparisons or correlation-based integrative analysis of other metabolomic and phenotypic features such as …

Functional Biogeography Of Angiosperms: Life At The Extremes, Amy E. Zanne, William D. Pearse, William K. Cornwell, Daniel J. Mcglinn, Ian J. Wright, Josef C. Uyeda

Ecology Center Publications

Nonlinear relationships between species and their environments are believed common in ecology and evolution, including during angiosperms' rise to dominance. Early angiosperms are thought of as woody evergreens restricted to warm, wet habitats. They have since expanded into numerous cold and dry places. This expansion may have included transitions across important environmental thresholds. To understand linear and nonlinear relationships between angiosperm structure and biogeographic distributions, we integrated large datasets of growth habits, conduit sizes, leaf phenologies, evolutionary histories, and environmental limits. We consider current-day patterns and develop a new evolutionary model to investigate processes that created them. The macroecological pattern …

Cell Death As A Trigger For Morphogenesis, Boris Aguilar, Ahmadreza Ghaffarizadeh, Christopher D. Johnson, Gregory J. Podgorski, Ilya Shmulevich, Nicholas S. Flann

Center for Integrated Biosystems Publications

The complex morphologies observed in many biofilms play a critical role in the survival of these microbial communities. Recently, the formation of wrinkles has been the focus of many studies aimed at finding fundamental information on morphogenesis during development. While the underlying genetic mechanisms of wrinkling are not well-understood, recent discoveries have led to the counterintuitive idea that wrinkle formation is triggered by localized cell death. This work examines the hypothesis that the material properties of a biofilm both power and control wrinkle formation within biofilms in response to localized cell death. Using an agent-based model and a high-performance platform …

Salvinia Radseq, Carol A. Rowe, Donald Hauber, Paul G. Wolf

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No abstract provided.

A Biogeographic Perspective On The Evolution Of Fire Syndromes In Pine Trees (Pinus: Pinaceae), Kevin J. Badik, Joshua P. Jahner, Joseph S. Wilson

Biology Faculty Publications

Our goals were to explore the relationship between biogeography and the evolution of fire-adaptive syndromes in the genus Pinus. We used a previously published time-calibrated phylogeny and conducted ancestral trait reconstruction to estimate the likely timing of diversification in Pinus, and to determine when fire-adaptive syndromes evolved in the lineage. To explore trait conservation among fire syndromes and to investigate historical biogeography, we constructed ancestral state reconstructions using the program RASP and estimated the degree of conservatism for fire-adapted traits in the program BaTS. Our reconstructions suggest that the Bering land bridge, which connected North America and Asia, probably played …

Monitoring Of Dung Beetle (Scarabaeidae And Geotrupidae) Activity Along Maryland's Coastal Plain, Patrick Simons, Michael Molina, Mallory A. Hagadorn, Dana L. Price

Biology Faculty Publications

Our understanding of how human activities impact insect communities is limited. Dung beetles, well known for the ecosystem services they provide, are faced with many conservation threats, particularly from deforestation and agriculture. Here we used 200-m transects and human-dung—baited pitfall traps to examine dung beetle populations in 7 forests of Maryland's Coastal Plain. We set traps once a month, from May 2014 to April 2015, to determine species presence, abundance, range, and seasonality. We collected 6463 individuals representing 22 species; Janes Island State Park (JISP) had the highest abundance (2705 individuals) and Martinak State Park (MSP) had the highest species …

Combinations Of Plant Water-Stress And Neonicotinoids Can Lead To Secondary Outbreaks Of Banks Grass Mite (Oligonychus Pratensis Banks), Alice Ruckert, L. Niel Allen, Ricardo A. Ramirez

Civil and Environmental Engineering Faculty Publications

Spider mites, a cosmopolitan pest of agricultural and landscape plants, thrive under hot and dry conditions, which could become more frequent and extreme due to climate change. Recent work has shown that neonicotinoids, a widely used class of systemic insecticides that have come under scrutiny for non-target effects, can elevate spider mite populations. Both water-stress and neonicotinoids independently alter plant resistance against herbivores. Yet, the interaction between these two factors on spider mites is unclear, particularly for Banks grass mite (Oligonychus pratensis; BGM). We conducted a field study to examine the effects of water-stress (optimal irrigation = 100% …

Skin Gland Concentrations Adapted To Different Evolutionary Pressures In The Head And Posterior Regions Of The Caecilian Siphonops Annulatus, Carlos Jared, Pedro Luiz Mailho-Fontana, Rafael Marques-Porto, Juliana Mozer Sciani, Daniel Carvalho Pimenta, Edmund D. Brodie Jr., Marta Maria Antoniazzi

Biology Faculty Publications

Amphibian skin is rich in mucous glands and poison glands, secreting substances important for gas exchange and playing a fundamental role in chemical defense against predators and microorganisms. In the caecilian Siphonops annulatus (Mikan, 1920) we observed a concentration of enlarged mucous glands in the head region. In the posterior region of the body a similar concentration is made up of enlarged poison glands. These accumulations of glands structurally resemble the macroglands previously reported in anurans and salamanders. The skin glands in these regions are each surrounded by collagen walls forming a honeycomb-like structure. The collagen network in the head …

Landscape-Scale Effects Of Supra-Seasonal Drought On Semi-Aquatic Snake Assemblages, Philip N. Vogrinc, Andrew M. Durso, Christopher T. Winne, John D. Willson

Biology Faculty Publications

Climate change is predicted to alter the frequency and intensity of precipitation events, placing stress on freshwater aquatic ecosystems and their associated wildlife. Thus, understanding interspecific variation in drought sensitivity and the repeatability of those responses across heterogeneous landscapes is critical. Semi-aquatic snakes serve important roles within aquatic ecosystems and several species are threatened. Yet, little is known about the effects of drought on semi-aquatic snake populations or assemblages. We systematically trapped 20 isolated wetlands in South Carolina before (2006) and after (2013) a multi-year supra-seasonal drought to determine drought-induced shifts in occupancy and detection for five semi-aquatic snake species. …