Biology Commons^™

Leptodactylus Cunicularius, W. R. Heyer, Miriam M. Heyer, Rafael O. De Sá

Biology Faculty Publications

Adult Leptodactylus cunicularius are moderately small. The head is longer than wide and the hind limbs are long (Table 1; Heyer and Thompson 2000 provided definitions of adult size and leg length categories for Leptodactylus). Male vocal sacs are internal, not externally expanded. The snout is protruding, not sexually dimorphic. Male forearms are not hypertrophied and males lack asperities on the thumbs and chest. The dorsum is variegated with small, often confluent, spots and blotches. There is a very thin interrupted mid-dorsal light stripe (pinstripe). Usually, there is a noticeable light, irregular, elongate, mid-dorsal blotch in the scapular region. The …

Leptodactylus Syphax, W. R. Heyer, Miriam M. Heyer, Rafael O. De Sá

Biology Faculty Publications

Adult Leptodactylus syphax are moderately sized (males 58-83 mm, females 70-90 mm SVL). The head is about as long as wide, but usually is just wider than long. The hind limbs are moderately short (Table 1; Heyar and Thompson 2000 provided definitions of adult size and leg length categories for Leptodactylus). Male vocal sacs are laterally expanded, tan, and not darker than the adjacent throat. The male snout is not spatulate, the snout profile is rounded to obtuse in both sexes. Male arms are hypertrophied during the breeding season in sexually active males. The male thumb has two large, …

A Habitat Model For The Detection Of Two-Lined Salamanders At C. F. Phelps Wildlife Management Area, Fauquier And Culpeper Counties, Virginia, Jay Mcghee, Michael D. Killian

Virginia Journal of Science

Aquatic salamanders represent an important component of Virginia river watersheds, but despite potential declines, few specifics are known about their habitat preferences. We surveyed the habitats of the northern two-lined salamander and collected data on an array of habitat variables associated with the species. We used a logistic regression analysis to develop a model predicting its presence or absence for a given 50m-transect. Our final model incorporated the variation in stream depth and direction of stream flow and accounted for 25% of the variation in our data. We conclude that stream depth variation is an important feature of salamander habitat …

A Sketch-Based Language For Representing Uncertainty In The Locations Of Origin Of Herbarium Specimens, Barry Kronenfeld, Andrew Weeks

Faculty Research and Creative Activity

Uncertainty fields have been suggested as an appropriate model for retrospective georeferencing of herbarium specimens. Previous work has focused only on automated data capture methods, but techniques for manual data specification may be able to harness human spatial cognition skills to quickly interpret complex spatial propositions. This paper develops a formal modeling language by which location uncertainty fields can be derived from manually sketched features. The language consists of low-level specification of critical probability isolines from which a surface can be uniquely derived, and high-level specification of features and predicates from which low-level isolines can be derived. In a case …

A Sketch-Based Language For Representing Uncertainty In The Locations Of Origin Of Herbarium Specimens, Barry J. Kronenfeld, Andrew Weeks

Faculty Research and Creative Activity

Uncertainty fields have been suggested as an appropriate model for retrospective georeferencing of herbarium specimens. Previous work has focused only on automated data capture methods, but techniques for manual data specification may be able to harness human spatial cognition skills to quickly interpret complex spatial propositions. This paper develops a formal modeling language by which location uncertainty fields can be derived from manually sketched features. The language consists of low-level specification of critical probability isolines from which a surface can be uniquely derived, and high-level specification of features and predicates from which low-level isolines can be derived. In a case …

Leptodactylus Savagei, W. R. Heyer, Miriam M. Heyer, Rafael O. De Sá

Biology Faculty Publications

Adult Leptodactylus savagei are large, the head is as wide as long or usually wider than long, and the hind limbs are moderate in length (Table 1; Heyer and Thompson (2000) provided definitions of adult size and leg length categories for Leptodactylus). Male vocal sacs are not visible externally. Sexually active males have hypertrophied forearms, usually 1 large black spine on each thumb, rarely with 1 large spine and a prepollical bump, and a pair of black chest spines. A pair of entire dorsolateral folds extend anteriorly from at least one_half to full distance from eye to groin, the …

Environmental Effects On Behavior And Physiology In Crayfish, Sonya M. Bierbower

University of Kentucky Doctoral Dissertations

Despite dramatic morphological differences between animals from different taxa, several important features in organization and sensory system processing are similar across animals. Because of this similarity, a number of different organisms including mammals, insects, and decapod crustaceans serve as valuable model systems for understanding general principles of environmental effects. This research examines intrinsic and extrinsic factors by behaviorally and physiologically means to identify the impact of environmental conditions on two distinct crayfish species- Procambarus clarkii (surface) and Orconectes australis packardi (cave).

The research identified behavioral and physiological responses in these two morphological and genetically distinct species. The studies also examined …

The Effects Of A Reservoir On Genetic Isolation In Two Species Of Darters, Kerstin Lindsay Edberg

Masters Theses & Specialist Projects

The addition of dams into a riverine system causes a wide range of changes (i.e., sedimentation, erosion, thermal) to the river as well as to the fish assemblages of that river. Although there have been many studies documenting the changes that occur to the fish assemblages in the impounded river, there have been fewer studies examining the effects of a reservoir on the fish inhabiting the tributaries upstream of the impoundment. One possible impact of a reservoir could be to act as a barrier to fish migration between streams.
To determine if reservoirs restrict migration, the genetic diversity of two …

The Development And Role Of Peripheral Auditory Structures In Otocinclus Affinis, Sri Kiran Kumar Reddy Botta

Masters Theses & Specialist Projects

Loricariidae is a very diverse family of catfishes found primarily in the Amazon River basin. These catfishes have a unique characteristic feature of having fenestrae (holes) in the skull region (compound pterotic bone) adjacent to their bi-lobed swim bladder. Since the swim bladders and the compound pterotic may act as an external ear for hearing in this taxon, I hypothesized that these swim bladders structures have an acoustical functional in the loricariid Otocinclus affinis. In order to understand the development of these structures in O. affinis, I first monitored the ontogeny of the compound pterotic bone by clearing …

Fisheries Occasional Publication No 75 - Research And Development Plan 2009-10, Department Of Fisheries Western Australia

Fisheries Occasional Publications

The Department of Fisheries R&D plan for 2009/10 outlines the research, monitoring and assessment activities that are specifically directed towards supporting the collection of information that will assist in achieving the objectives of the Fish Resources Management Act (1994) for the coming five year period. This series is updated on an annual basis and should be read in conjunction with the most recent State of Fisheries report where comprehensive analyses of the current status of each of the fisheries and fish habitat resources are described.

The plan specifically focuses on those activities that are currently planned or identified which directly …

Assessment Of The Endangered Species Podarcis Carbonelli On A Microgeographic Scale: A Molecular, Morphological And Physiological Approach, Maria Clara Figueirinhas Do Amaral

Masters Theses & Specialist Projects

The lizard Podarcis carbonelli is an endangered species endemic to the Iberian Peninsula. One location where this species occurs is at the Berlengas Natural Preserve, an Atlantic archipelago off the coast of Portugal. These island populations are geographically separated from nearby mainland populations. The fundamental question is, are these insular individuals distinct from the mainland populations? Four localities were chose for comparison: two island populations and two nearby coastal populations. We assessed this question using three distinct approaches: molecular, morphological and physiological approach. We sequenced the 12S RNA, the mtDNA Control Region and the 7th intron of the !-fibrinogen gene …

Predicting Leptodactylus (Amphibia, Anura, Leptodactylidae) Distributions: Broad-Ranging Versus Patchily Distributed Species Using A Presence-Only Environmental Niche Modeling Technique, Miguel Fernández, Daniel Cole, W. R. Heyer, Stephen Reichle, Rafael O. De Sá

Biology Faculty Publications

Locality data available for many, if not most, species of Neotropical frogs are based on written descriptions of the collecting sites, not on GPS device determined coordinate data. The pre-GPS device data are imprecise relative to GPS data. Niche modeling is a powerful technique for predicting geographic distributions that provides the best results when the locality data are precise. The purpose of this study is to determine whether imprecise historical locality data are sufficient such that niche modeling techniques can yield realistic new insights to species-level distributions. Two sets of frogs of the genus Leptodactylus that have known different kinds …

A New Brevicipitid Species (Brevicipitidae: Callulina) From The Fragmented Forests Of The Taita Hills, Kenya, Simon P. Loader, G. John Measey, Rafael O. De Sá, Patrick K. Malonza

Biology Faculty Publications

A new species Callulina dawida is described from the Taita Hills, Kenya. It is distinguished from other members of the genus on the basis of the degree of digital expansion. The species further differs from other members of the genus based on molecular sequence comparisons and on its call. The morphological variation in the new species is described, including a comparison of internal and external characters and sexual dimorphism with other species of Callulina. The conservation status of the species, on the basis of its restricted distribution and land use changes in the area, is considered to be of …

Spatial, Seasonal, And Size-Dependent Variation In The Diet Of Sacramento Pikeminnow In The Main Stem Of Chorro Creek, Central Coast California, Brian G. Dugas

Master's Theses

This study examined the diet composition of ninety-nine Sacramento pikeminnow (150-410 mm [5.9-16 in] fork length [FL]) collected from the upper and lower main stem of Chorro Creek, Morro Bay Watershed, California in 2006. The goal of this study was to characterize the spatial and seasonal variability in the diet of Sacramento pikeminnow within Chorro Creek and to determine what proportion of the diet is represented by rainbow trout (Oncorhynchus mykiss) and their anadromous form (steelhead). Prey was identified in 88% of the samples collected in the early season and 84% of the samples collected in the late season. Fish …

A Comparative Ecological Study Of Two Sister Species Of Darters In Kentucky, Etheostoma Kantuckeense And Etheostoma Lawrencei, Bjorn Victor Schmidt

Masters Theses & Specialist Projects

Etheostoma kantuckeense and E. lawrencei are former members of the wide ranging E. spectabile species complex. Etheostoma kantuckeense is endemic to the Barren River Basin in Southern Kentucky and Northern Tennessee, while E. lawrencei occurs in the Green River, Salt River, and Cumberland River Basins of Central and Eastern Kentucky. Isolation of populations within these drainages has allowed for a relatively recent evolutionary divergence, leading to slight differences in morphology. This study was conducted to address if geographical isolation has led to measurable differences in the ecology of these two species. In particular, habitat preference across three spatial scales and …

Oceanic-Atmospheric Modes Of Variability And Their Effect On River Flow And Blue Crab (Callinectes Sapidus) Abundance In The Northcentral Gulf Of Mexico, Guillermo Humberto Sanchez-Rubio

Dissertations

Oceanic-atmospheric modes of variability occur on interdecadal, multidecadal, decadal, and interannual timescales and their influence on climate around the world has been confirmed. The present study investigates Mississippi River and Pascagoula River flows in response to the influence of one or more of the four oceanic-atmospheric modes of variability: the Pacific Decadal Oscillation (PDO), the Atlantic Multidecadal Oscillation (AMO), the North Atlantic Oscillation (NAO), and the El Nino Southern Oscillation (ENSO). These modes of variability are present in phases: PDO warm (PDOw) and cold (PDOc), AMO warm (AMOw) and cold (AMOc), NAO positive (NAOp) and negative (NAOn), and ENSO warm …

Distribution And Site Selection Of Le Conte's And Crissal Thrashers In The Mojave Desert: A Multi-Model Approach, Dawn Marie Fletcher

UNLV Theses, Dissertations, Professional Papers, and Capstones

Information on the distribution and habitat requirements of a species are critical components to the development of meaningful conservation plans. Such knowledge, however, is particularly difficult to obtain for species that are elusive and occur at low densities, such as the Le Conte's ( Toxostoma lecontei ) and Crissal (Toxostoma crissale ) thrashers. In association with a regional conservation plan, I evaluated the distribution and habitat selection of these thrashers within Clark County, Nevada in the eastern Mojave Desert. I used a call-broadcast approach to sample 432 stratified random locations, detecting Le Conte's thrashers at 45 locations and Crissal …

Differential Response Of Amp Activated Protein Kinase (Ampk) And Hsp70 To Temperature Stress In The Gastropod, Nucella Lapillus, Emily Zimmermann

All Theses And Dissertations

Populations of the gastropod Nucella lapillus are polymorphic for shell color, with light-colored shells predominating on warmer, wave-protected shores and dark-colored shells limited primarily to cooler, wave-exposed shores. During thermal stress, darker shells attain higher body temperatures than lighter shells. These results suggest that heat stress may determine field distribution patterns. However, there is currently little evidence of physiological consequences of thermal stress in these organisms. Following the guiding hypothesis that heat stress leads to cellular energy depletion, we explored whether the central energy regulator AMP-activated Protein Kinase (AMPK) is activated by heat stress. We compared this response in both …

Fisheries Occasional Publication No. 66 - Scientific Review Of The West Coast Demersal Scalefish Fishery, Western Australia, Michael O'Neill, Department Of Fisheries Western Australia

Fisheries Occasional Publications

In December 2008 the Hon Norman Moore MLC, Minister for Fisheries Western Australia appointed two independent experts to assess separately 1) the validity of scientific advice to management and 2) options to manage recreational fishing of west coast demersal scalefish. The following review (1) assesses the validity of research outlining the status of baldchin groper (Choerodon rubescens), West Australian dhufish (Glaucosoma hebraicum) and snapper (Pagrus auratus) as described in the terms of reference. In addition to the terms of reference, an opinion was requested regarding the current appropriateness of the research advice (Wise et al 2007) and the resulting management …

Fisheries Occasional Publication No. 63 - Western Rock Lobster Ecological Risk Assessment, Department Of Fisheries, Western Australia, International Risk Consultants Group Of Companies

Fisheries Occasional Publications

This Ecological Risk Assessment, conducted by IRC Environment (part of International Risk Consultants) and Department of Fisheries WA (FWA) was the result of an initiative by the WA Fishing Industry Council (WAFIC) and (FWA). This report is based on a risk assessment workshop undertaken in February 2001 at the FWA Marine Research Laboratories in Waterman but includes additional background material to justify some of the rankings of the workshop.

The broad intent of the workshop was to provide a register of the potential main ecological risks that arise from the various activities carried out by the western rock lobster (WRL) …

Fisheries Occasional Publication No.057 - Introduced Marine Species In Western Australia, Department Of Fisheries Western Australia

Fisheries Occasional Publications

As the largest State in Australia, Western Australia (WA) has a long and relatively pristine coastline that stretches over 12,500 km, or over 20,700 km if the State’s 3,747 islands are included. The coast ranges over 20 degrees of latitude from the temperate south coast to the northern tip of the tropical Kimberley. There are a wide variety of coastal marine habitats in this vast area. The south coast has extensive white sandy beaches interspersed with granite headlands. A diverse range of nearly 800 species of temperate marine algae, or seaweeds, occurs in the area. With 26 species, the seagrasses …

Granite Rock Outcrops: An Extreme Environment For Soil Nematodes?, Erin Austin, Katharine Semmens, Charles Parsons, Amy M. Treonis

Biology Faculty Publications

We studied soil nematode communities from the surface of granite flatrock outcrops in the eastern Piedmont region of the United States. The thin soils that develop here experience high light intensity and extreme fluctuations in temperature and moisture and host unique plant communities. We collected soils from outcrop microsites in Virginia (VA) and North Carolina (NC) in various stages of succession (Primitive, Minimal, and Mature) and compared soil properties and nematode communities to those of adjacent forest soils. Nematodes were present in most outcrop soils, with densities comparable to forest soils (P > 0.05). Nematode communities in Mature and Minimal soils …

Biology And Conservation Of Horseshoe Crabs, John T. Tanacredi, Mark L. Bottom, David R. Smith

School of Marine and Environmental Sciences Faculty and Staff Publications and Presentations

We dedicate this book to Drs. Carl N. Shuster, Jr. and Koichi Sekiguchi for their life-long contributions to the biology and conservation of the magnificent horseshoe crab.

Quantifying Soil And Groundwater Chemistry In Areas Invaded By Tamarix Spp. Along The Middle Rio Grande, New Mexico, Michelle Kelly Ohrtman

Electronic Theses and Dissertations

Tamarix spp. (a.k.a. saltcedar, tamarisk) invasion is considered a major ecological threat at both national and global levels, with supposed impacts on soil and water chemistry. One of the most often cited mechanisms of ecosystem change by Tamarix is through its ability to deposit salty exudates and salt-rich leaf litter. The degree to which Tamarix relates to elevated soil and groundwater salinity, however, has not been adequately quantified, especially in the context of environmental factors that may also influence salinity. If Tamarix does elevate localized salinity by means of uptake, concentration and exudation by plant tissues, then we might expect …

Assessment Of River Herring And Striped Bass In The Connecticut River: Abundance, Population Structure, And Predator/Prey Interactions, Justin P. Davis, Eric T. Schultz, Jason Vokoun

EEB Articles

Populations of anadromous alewife Alosa pseudoharengus and blueback herring A. aestivalis, collectively referred to as river herring, have declined in the Connecticut River. An explanatory hypothesis for these declines is that predation pressures have increased as a result of recent increases in abundance of sympatric striped bass Morone saxatilis. We sampled river herring and striped bass from the stretch of the Connecticut River between Wethersfield, CT and Holyoke, MA during the vernal migration seasons of 2005-2008. The objectives of the sampling program were to assess abundance, temporal/spatial distribution, and population structure of both river herring and striped bass, …

Host And Seasonal Effects On The Infection Dynamics Of Skrjabinoptera Phrynosoma (Ortlepp) Schulz, 1927, A Parasitic Nematode Of Horned Lizards, Kathryn Claire Hilsinger

College of Graduate Studies: Theses & Dissertations

Author's Abstract: Skrjabinoptera phrynosoma (Ortlepp) Schulz, 1927 is a common parasitic nematode of horned lizards. The life cycle of S. phrynosoma was described by Lee in 1957, but has received little attention since. The present study addressed effect of season as well as host characteristics on the infection dynamics in lizard hosts. In the Alvord Basin in southeastern Oregon, S. phrynosoma were collected from Phrynosoma platyrhinos Gerard 1852 horned lizards via stomach flushes, cloaca flushes and fecal pellet collections. Parasite load variables (number of nematodes per host, length of those nematodes, and total worm burden (ΣL)) were analyzed within three …

Estrogenic Compounds Downstream From Three Small Cities In Eastern Nebraska: Occurrence And Biological Effect, Marlo K. Sellin, Daniel D. Snow, Debbie L. Akerly, Alan S. Kolok

Biology Faculty Publications

Recent studies have detected estrogenic compounds in surface waters in North America and Europe. Furthermore, the presence of estrogenic compounds in surface waters has been attributed, in some cases, to the discharge of wastewater treatment plant (WWTP) effluent. The primary objective of the current study was to determine if WWTP effluent contributes estrogens to the surface waters of Nebraska. A second objective of this study was to determine if estrogens were found in concentrations sufficient enough to manifest feminizing effects on fish. These objectives were satisfied by deploying polar organic chemical integrative samplers (POCIS) and caged fathead minnows at eight …

Horseshoe Crab Spawning Survey Protocol, Jennifer Mattei

Biology Faculty Publications

The protocol lists supplies and clothing needed for the survey, as well as which data is to be collected and when and how it should be entered for the census of horseshoe crabs on the Recapture Data Sheet for 2009. Adopted from Cape Cod and Delaware Bay survey protocols.

Effects Of Habitat Quality On Reproduction In Two Georgia Populations Of Gopherus Polyphemus, Jaqueline W. Entz

College of Graduate Studies: Theses & Dissertations

Author's Abstract: The purpose of this study was to examine differences in maternal investment by examining variation in the habitat structure and reproductive parameters for two populations of Gopherus polyphemus in Southeast GA. Both habitat structure and reproductive parameters for these populations are known from a previous study, thus this study expands upon the previous one and addresses four main questions. (1) Has habitat quality changed in the past ten years within and between population sites? (2) Could a change of habitat have affected female morphology or female reproductive parameters within or between populations? (3) Is female body size shaping …

Effects Of Olfactory And Visual Predators On Nest Success And Nest-Site Selection Of Waterfowl In North Dakota, Jennifer Borgo

Green Canyon Environmental Research Area, Logan Utah

No abstract provided.