Aquaculture and Fisheries Commons^™

Assessment Of Largemouth Bass (Micropterus Salmoides) Condition Using Liver Histopathology, Health Parameters And Water Quality Of The Central Chattahoochee River Watershed, Kari Carmack Goodwin

Theses and Dissertations

The health of Largemouth bass from west-central Georgia was assessed using liver histopathology and the degree of tissue change index (DTC), hepatosomatic indices (HSI), relative weight, condition factors, and intersex. These health parameters as well as water chemistry data were compared across four bodies of water, three within the Chattahoochee watershed, and one pseudo-control located in the Flint watershed. Fish from Lake Oliver, Lake Harding, and West Point Lake had severely impacted liver health compared to Warm Springs National Fish Hatchery, with DTC rankings over 100 for the three lakes within the Chattahoochee watershed, demonstrating severely damaged livers. There was …

Initial Impacts Of The Covid-19 Pandemic On Australian Fisheries Production, Research Organisations And Assessment: Shocks, Responses And Implications For Decision Support And Resilience, Emily M. Ogier, David C. Smith, Sian Breen, Caleb Gardner, Daniel J. Gaughan, Harry K. Gorfine, Alistair J. Hobday, Natalie Moltschaniwskyj, Ryan Murphy, Thor Saunders, Michael Steer, James Woodhams

Fisheries Research Articles

Australia’s fisheries have experience in responding individually to specific shocks to stock levels (for example, marine heatwaves, floods) and markets (for example, global financial crisis, food safety access barriers). The COVID-19 pandemic was, however, novel in triggering a series of systemic shocks and disruptions to the activities and operating conditions for all Australia’s commercial fisheries sectors including those of the research agencies that provide the information needed for their sustainable management. While these disruptions have a single root cause—the public health impacts and containment responses to the COVID-19 pandemic—their transmission and effects have been varied. We examine both the impacts …

Grow-Out Culture Of Oyster Magallana Bilineata (Röding, 1798) Using Pouches: A Comparison Of Growth And Survival In The River And Earthen Pond, Ma. Junemie Hazel L. Lebata-Ramos, Ellen Flor D. Solis, Mark Jude C. Almeida

The Philippine Agricultural Scientist

Oysters are among the most in-demand aquaculture commodities in the Philippines and worldwide. With the decreasing culture area and the deteriorating water quality of oyster beds, there is a need to explore new culture sites and techniques to address the problems of dwindling stocks and the increasing demand for better quality oysters. This study compared the growth and survival of the oysters Magallana bilineata, the new accepted name of Crassostrea iredalei, cultured in an earthen pond and the river using pouches suspended from rafts. Mean growth rates of oysters in length and weight were significantly higher in those …

Building Artificial Reefs From Recycled Construction Materials: A Feasibility Study, Nicholas H. Lew

Construction Management

Naturally occurring reefs are some of the world’s most biologically diverse ecosystems formed by jagged rocks tucked slightly below sea level. In recent years global warming began to pose a major threat to many reef habitats. Most relevant is the increase in surface seawater temperatures that cause coral to bleach, taking away major food sources for larger marine species. Researchers have combated this by deploying artificial reefs in substitution for naturally formed limestone rock formations in order to promote the expansion of coastal habitats. This project specifically aims to utilize construction waste towards the production of artificial reefs, effectively upcycling …

Fine-Scale Variability In Catch And Growth Rates Of Western Rock Lobsters (Panulirus Cygnus) Show Heterogeneous Life-History Parameters, A Miller, Jason How, Simon De Lestang, Brooke A. Gibbons, E Lester, M Navarro, J Fitzhardinge, Tim J. Langlois

Fisheries Research Articles

Context: The western rock lobster fishery is recognised to be conservatively managed, with breeding stock levels estimated to be at record levels over the past decade. Despite this, anecdotal reports from commercial fishers identified an area of unexpectedly low catches in the centre of the fishery and lobsters’ biogeographic distribution.

Aim: To confirm the presence of this suspected ‘low-catch’ zone and examine the variability in catch and growth rates of lobsters if identified.

Methods: This study conducted an intensive mark–recapture survey over 8 months to explore catch rate, density, movement and growth rates across this ‘low-catch’ zone and three comparable …

Bats Increased Foraging Activity At Experimental Prey Patches Near Hibernacula, Winifred F. Frick, Yvonne A. Dzal, Kristin A. Jonasson, Michael D. Whitby, Amanda M. Adams, Christen Long, John E. Depue, Christian M. Newman, Craig K. R. Willis, Tina L. Cheng

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

1. Emerging infectious diseases in wildlife can threaten vulnerable host populations. Actions targeting habitat improvements to aid population resilience and recovery may be beneficial long-term strategies, yet testing the efficacy of such strategies before major conservation investments are made can be challenging.

2. The disease white-nose syndrome (WNS) has caused severe declines in several species of North American hibernating bats. We tested a novel conservation approach targeted at improving foraging conditions near bat hibernacula by experimentally manipulating insect density in the pre-hibernation fattening period and spring emergence recovery period. We measured foraging (feeding buzzes) and echolocation activity of little brown bats Myotis …

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Potential Repercussions Of Offshore Wind Energy Development In The Northeast United States For The Atlantic Surfclam Survey And Population Assessment, Sarah Borsetti, Daphne M. Munroe, Andrew M. Scheld, Eric N. Powell, John M. Klinck, Eileen E. Hofmann

Faculty Publications

The Atlantic surfclam Spisula solidissima fishery, which spans the U.S. Northeast continental shelf, is among the most exposed to offshore wind energy development impacts because of the overlap of fishing grounds with wind energy lease areas, the hydraulic dredges used by the fishing vessels, and the location of vessel home ports relative to the fishing grounds. The Atlantic surfclam federal assessment survey is conducted using a commercial fishing vessel in locations that overlap with the offshore wind energy development. Once wind energy turbines, cables, and scour protection are installed, survey operations within wind energy lease areas may be curtailed or …

Blanding’S Turtle (Emydoidea Blandingii): Species Conservation Assessment, Melissa J. Panella, Colleen Rothe-Groleau

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the Blanding’s turtle (Emydoidea blandingii) as a Tier 1 at-risk species. Some general management recommendations are made here regarding Blanding’s turtles; however, conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of this at-risk turtle that will aid in the decision-making …

American Eel (Anguilla Rostrata) And Other Fishes As Surveyed By Environmental Dna In The Bronx River And Hudson River Watershed, Sam C. Chin

Dissertations, Theses, and Capstone Projects

Mounting an effective response to the threats faced by freshwater fish may require expansions to aquatic biomonitoring in excess of what is feasible using the capture-based survey techniques currently relied upon by natural resource managers. Methods for analyzing environmental DNA (eDNA) are emerging as a minimally invasive and cost-effective approach for surveying fish and other organisms. By detecting taxon-specific DNA sequences recovered from environmental samples (e.g. water, sediment), eDNA methods are able to infer species presence from samples that can be collected rapidly with simple equipment. In many cases, eDNA detection rates of fish species have been shown to meet …

What Drives Larval Condition For Northern Anchovy (Engraulis Mordax)? Implications For Coastal Pelagic Species Recruitment Fluctuations And Fishery Management Practices, Michelle Robidas

Theses

Discerning the causes of population boom and bust cycles for coastal pelagic species (CPS) has been a major focus of fisheries management research for over a century. Year-class strength is contingent on larval survival and condition, which can be influenced by larval size at age and growth rate. These two factors, in turn, can be affected by maternal investment and environmental variables such as water temperature, salinity, oxygen, and chlorophyll a. We evaluated each of these factors from 127 two to eight week-old Northern Anchovy (Engraulis mordax) larvae off the coast of San Diego to San Francisco, …

Summer Movement Of Burbot (Lota Lota) In An Isolated Michigan River And Pre-Restoration Assessment Of The Grand River Fish Assemblage In Downtown Grand Rapids, Michigan, Usa, Alexis Neff

Masters Theses

This thesis research consisted of two complimentary projects. The first focused on understanding the ecology and life-history of an isolated population of a freshwater fish, the Burbot; the second on a pre-restoration assessment of the fish community in the Grand River.

Understanding life-history strategies of species is important to recognize changes in behavior caused by anthropogenic effects. Burbot (Lota lota), are important apex predators in their native range, is understudied, and exhibits complex life-history strategies. Specifically, little research has been done on isolated river populations. My research objective was to assess Burbot movement and habitat use over a …

Do Channel Catfish Consume Zebra Mussels?, Casey M. Myers

Journal of Earth and Life Science

Channel catfish Ictalurus punctatus are a generalized opportunistic feeder with a wide range of diet compositions. In the Midwest, zebra mussels Dreissena polymorpha have quickly spread, causing large effects on aquatic ecosystems structures and functions. Channel catfish are known to consume native mollusks, however, little research has been done on the potential predation of zebra mussels by channel catfish. Therefore, the objective of this study was to analyze channel catfish diets to determine if zebra mussels are consumed. The channel catfish were obtained from the Sauk River chain of lakes between the dates of 14 June and 28 July 2023. …

Ecological Risk Assessment For The Western Australian Silverlip Pearl Oyster (Pinctada Maxima) Resource, K. A. Smith, S. Brown, A. M. Hart, A. Bissell

Fisheries Research Reports

In August 2022, the Department of Primary Industries and Regional Development (DPIRD) convened an ecological risk assessment (ERA) of the fishery and aquaculture operations that access the Western Australian (WA) Silverlip Pearl Oyster (Pinctada maxima) resource (Resource).

The ERA considered the potential ecological impacts of the WA commercial Silverlip Pearl Oyster Fishery and related aquaculture activities including hatchery and seeding operations. The assessment evaluated the impact of each activity on all relevant retained and discarded species; threatened, endangered and protected species; habitats and the broader environment. Risks associated with aquaculture activities were also considered, including genetic impacts on …

Capacity-Building Project To Progress The Implementation Of International Instruments To Combat Iuu Fishing (Capfish) : Workshop 3, 18-21 October 2022, World Maritime University

Reports

Illegal, Unreported and Unregulated (IUU) fishing is a complex and multifaceted problem, with dire consequences for aquatic ecosystems, coastal communities, fishers and fish workers, and economic and national security. It particularly affects developing countries, and is estimated to cost the global economy USD 20 billion each year. This represents foregone taxes, license fees, and revenue from resources that could have been legally exploited. Future opportunities are also lost as fish stocks dwindle and collapse, with knock-on socioeconomic effects. As those involved in IUU fishing seek to cut costs wherever possible, and are often involved in other illegal activities, IUU fishing …

Effect Of Initial Infestation Of Zebra Mussels On Freshwater Drum Diets In Red Lake, Mn, Marissa M. Pribyl

Journal of Earth and Life Science

Zebra mussel Dreissena polymorpha veligers were first found in the Red Lake system in Beltrami County in 2017, however no adult zebra mussels have been documented. When zebra mussels first invade a system, fish often switch their prey use to this new abundant resource. Freshwater drum Aplodinotus grunniens is one of these fish species known to consume physidae and bivalves, including zebra mussels, using pharyngeal teeth, the molar-like grinders in the back of their throats. This research aims to identify any presence of adult zebra mussels in the system and determine freshwater drum diet composition and feeding patterns by analyzing …

Evaluating Benthic Macroinvertebrate Populations In Response To Scouring Events In The Trinity River, Ca, Liam Hay, Michael W. O'Neil, Chloe Pieper-Wasem

Environmental Science & Management Senior Capstones

River systems across California have been impacted by appurtenant structures such as dams and diversions. These structures have had an adverse impact on Benthic invertebrate (BMI) communities by regulating river systems and changing the natural hydraulic pulses that follow seasonal precipitation. Benthic invertebrates are a critical food resource for salmonids and serve as an indicator of ecosystem health. Our study was interested in seeing the effects of scouring events on BMI in the Trinity River of Trinity County, C.A. Following a large precipitation event that occurred in the region in December 2022, an influx of water entered the river through …

Have Rusty Crayfish Affected The Diets Of Yellow Perch?, Matthew D. Kvam

Journal of Earth and Life Science

Freshwater ecosystems are some of the most susceptible to invasive species. It is one of the reasons they face the highest levels of species endangerment. Rusty crayfish Faxonius rusticus are one such invasive species, they fragment food webs and negatively affect native species. However, it seems as though native species are beginning to rely on them as a source of food. Yellow perch Perca flavescens, an important forage and game species, is one such species that is highly affected by these invasions. At smaller sizes yellow perch primarily feed on invertebrates whose populations are degraded by rusty crayfish. Therefore, the …

Sustainability Practices In Aquaculture: Using Algae Turf Scrubber Biomass To Raise Black Soldier Flies As An Alternative Feed In Blue Tilapia, Oreochromis Aureus, Culture, Michelle C. Lowery

College of Graduate Studies: Theses & Dissertations

Since the 1980s, non-algal aquaculture has grown to encompass 49% of all seafood production in response to a growing human population and increased seafood demand (FAO, 2022). Hurdles exist to aquaculture sustainability, including dependence on wild sourced fishmeal (FM) and the impacts wastewater discharge. It takes 4-5 tons of wild forage fish to produce one ton of dry FM (Miles and Chapman, 2006) and as aquaculture is primarily conducted in earthen ponds and public open water bodies (FAO, 2022), finfish culture can have a high impact on the surrounding environment by discharging excess nutrients. This study used algae turf scrubber …

Seasonal Growth, Movement, And Survival Of Juvenile Coho Salmon (Oncorhynchus Kisutch) Utilizing Restored Rearing Habitat, Monica S. Tonty

Cal Poly Humboldt theses and projects

The Scott River supports the most robust population of threatened Coho Salmon Oncorhynchus kisutch remaining in the Klamath River basin. Even in the Scott River, low quality and restricted extent of juvenile rearing habitat limits the Coho Salmon population to a small fraction of historic abundance. To support persistence and recovery of Scott River Coho Salmon, the Scott River Watershed Council (SRWC) has constructed a portfolio of restoration projects to improve juvenile rearing habitat, including beaver dam analogs (BDAs). The Scott River BDAs were the first implemented anywhere in California. This study compares juvenile Coho Salmon responses associated with production …

Fitting Time Series Models To Fisheries Data To Ascertain Age, Kathleen S. Kirch, Norou Diawara, Cynthia M. Jones

OES Faculty Publications

The ability of government agencies to assign accurate ages of fish is important to fisheries management. Accurate ageing allows for most reliable age-based models to be used to support sustainability and maximize economic benefit. Assigning age relies on validating putative annual marks by evaluating accretional material laid down in patterns in fish ear bones, typically by marginal increment analysis. These patterns often take the shape of a sawtooth wave with an abrupt drop in accretion yearly to form an annual band and are typically validated qualitatively. Researchers have shown key interest in modeling marginal increments to verify the marks do, …

Effects Of Dietary Genistein And Fugacity Modelling In An Aquaculture System, Travis Schaeffer

Electronic Theses and Dissertations

Fish production from aquaculture has continued to grow over the past several decades, with finfishes being fed formulated, fish meal-based diets supporting most of that industry’s growth. However, increased demand and costs, coupled with static volume and erratic supplies of fish meal, has resulted in the use of alternative plant-derived protein sources. A common oilseed protein source is soybean meal (SBM), because of its protein content and amino acid profile; however, it also contains multiple anti-nutritional factors, including phytoestrogens. Phytoestrogens are naturally produced, estrogenmimicking compounds, with isoflavones receiving the most investigation as higher levels of these compounds occur within SBM. …

Ancient Bears Provide Insights Into Pleistocene Ice Age Refugia In Southeast Alaska, Flavio Augusto Da Silva Coelho, Stephanie Gill, Crystal M. Tomlin, Marilena Papavassiliou, Sean D. Farley, Joseph A. Cook, Sarah A. Sonsthagen, George K. Sage, Timothy H. Heaton, Sandra L. Talbot, Charlotte Lindqvist

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

During the Late Pleistocene, major parts of North America were periodically covered by ice sheets. However, there are still questions about whether ice-free refugia were present in the Alexander Archipelago along the Southeast (SE) Alaska coast during the last glacial maximum (LGM). Numerous subfossils have been recovered from caves in SE Alaska, including American black (Ursus americanus) and brown (U. arctos) bears, which today are found in the Alexander Archipelago but are genetically distinct from mainland bear populations. Hence, these bear species offer an ideal system to investigate long-term occupation, potential refugial survival and lineage turnover. Here, we present genetic …

Movement And Genomic Methods Reveal Mechanisms Promoting Connectivity In A Declining Shorebird: The Lesser Yellowlegs, K. Christie, R. E. Wilson, J. A. Johnson, C. Friis, C. M. Harwood, L. A. Mcduffie, E. Nol, Sarah A. Sonsthagen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Fecal Dna Metabarcoding Shows Credible Short-Term Prey Detections And Explains Variation In The Gut Microbiome Of Two Polar Bear Subpopulations, M. Franz, L. Whyte, T. C. Atwood, D. Menning, Sarah A. Sonsthagen, S. L. Talbot, K. L. Laidre, E. Gonzalez, M. A. Mckinney

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Comparing Fish Species Assemblage Between Impacted And Restored Estuarine Salt Marshes Within The Eel River Estuary, Humboldt Co. Ca, Adam Aguilar, Isaac Basham-Clair, Tristan F. Parkinson, Larkin C. Wells

Undergraduate Scholarship

This report details a study assessing the fish assemblages of a recently restored estuarine salt marsh site, and a similar unrestored and impacted site along the Eel River estuary. These two sites are located within the Eel River (Wiya’t) estuary, roughly 10 miles west of the city of Fortuna, CA. This study was conducted during the months of September through October 2023. Data collection was done through seine net dragging at randomly selected sample points across both sites. Seine net hauls were recorded by species and species count, which were later computed using a diversity index to provide values representative …

A Preliminary Assessment Of The Spawning Potential Ratio Of Five Target Species Of The Coastal Gillnet Fishery In Guyana And Suriname, Tomas Willems, Elford Liverpool, Michael Hiwat

Gulf and Caribbean Research

Data—limited stock assessment methods have the potential to positively impact livelihoods of fishermen around the world by providing management recommendations that aim to optimize sustainable yields from fisheries. Some years ago, a novel length— based (LB) method was developed for the assessment of spawning potential ratio (SPR), a measure of the reproductive capacity of fish stocks. We applied the LB—SPR method to 5 important target species of the coastal gillnet fishery in Guyana and Suriname. Nebris microps (Smalleye Croaker; 32% SPR) and Macrodon ancylodon (King Weakfish; 34% SPR) had the highest spawning potential, but remained below the 40% target level …

The Effects Of Warming Rate On The Thermal Tolerance Of A Southern Population Of Striped Bass (Morone Saxatilis), James Barrett

Honors College Theses

Climate change and global warming is an ever-growing concern for our environment and the survivability of the animals which inhabit it. With water temperatures expected to rise 2-3℃ in the next century, many aquatic organisms may be limited in their habitats based on their thermal tolerance (Lleras 2019). Southern populations of striped bass (Morone saxatilis) in the Southeastern United States could be some of the hardest hit by the effects of climate change due to their unusual life history as compared to the more northern populations of striped bass. These southern striped bass do not engage in coastal …

Porifera: Biology And Medicinal Properties, Emma L. Rayfield

Undergraduate Honors Theses

The focus of this thesis is the possibility of oceanic medicine through understanding the general biology of poriferans, their symbionts, medicinal properties, and how we could harvest sponges conservatively. It was necessary to understand the basic biology of poriferans regarding their structures, differences in their classes, and how they obtain nutrition, develop, and reproduce. The ecology of the poriferans was also researched including their larval and sessile stages and how their environment determines where they settle. Additionally, ecology was examined including how poriferans interact with symbionts and other organisms. This then was utilized to seek whether poriferans had useful medical …

Surveillance And Monitoring Of Amphibian Pathogens And Evaluating The Impacts Of An Associated Course-Based Undergraduate Research Experience (Cure), Jennifer Perez

EWU Masters Thesis Collection

Amphibians are a highly diverse class of vertebrates and crucial for natural ecosystems, inhabiting both aquatic and terrestrial environments at different life stages. However, amphibians are facing devastating declines largely due to the disease chytridiomycosis, caused by the fungal pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal). This disease can lead to population declines, biodiversity loss, and species extinction. However, resources to study and mitigate this disease are limited and an opportunity to assist in these efforts has been created in the form of a course-based undergraduate research experience (CURE). Chapter 1 of my thesis used Roger's Diffusion of Innovations …

Potential Repercussions Of Offshore Wind Energy Development In The Northeast United States For The Atlantic Surfclam Survey And Population Assessment, Sarah Borsetti, Daphne M. Munroe, Andrew M. Scheld, Eric N. Powell, John M. Klinck, Eileen E. Hofmann

CCPO Publications

The Atlantic surfclam Spisula solidissima fishery, which spans the U.S. Northeast continental shelf, is among the most exposed to offshore wind energy development impacts because of the overlap of fishing grounds with wind energy lease areas, the hydraulic dredges used by the fishing vessels, and the location of vessel home ports relative to the fishing grounds. The Atlantic surfclam federal assessment survey is conducted using a commercial fishing vessel in locations that overlap with the offshore wind energy development. Once wind energy turbines, cables, and scour protection are installed, survey operations within wind energy lease areas may be curtailed or …