Aquaculture and Fisheries Commons^™

An Examination Of The Eastern Nebraska And Western Iowa Flash Flood Event Of 6-7 August 1999, Catherine M. Zapotocny

National Oceanographic and Atmospheric Administration: Technical Reports and Related Materials

Flash flooding occurs each summer in eastern Nebraska and western Iowa. While 10-inch rains are extraordinary, it is not uncommon to have at least one excessive rain event during the annual convective season. A significant flash flood occurred in east central Nebraska and western Iowa the night of August 6, 1999 into the morning of August 7, 1999. Antecedent hydrologic conditions limited the loss of life, however considerable property damage resulted as the heavy rain fell over the urbanized areas in eastern Nebraska and western Iowa.

Several flash flood ingredients came together over the area. These meteorological factors are typical …

Trophic Ecology Of Black Swallowers (Scombriformes: Chiasmodontidae: Chiasmodon) In The Deep-Pelagic Gulf Of Mexico, Travis J. Kirk

All HCAS Student Capstones, Theses, and Dissertations

The ecology of deep-pelagic predatory fishes remains poorly understood despite their importance as ecosystem regulators and energy transfer vectors. This study investigated the trophic ecology of three species of the predatory fish genus Chiasmodon (“black swallowers”) in the Gulf of Mexico, a region that serves as an analog for the global low-latitude deep pelagial, the world’s largest cumulative ecosystem. Foraging habits (e.g., selectivity, chronology, daily ration) of an “advanced” evolutionary fish in a system that is otherwise dominated by basal fish taxa, were quantitatively estimated via high-resolution stomach content analysis. A quantitative dataset of both predator and prey abundance, the …

Spatial Assessment Of Slender Madtom (Noturus Exilis) Diets Within The Illinois Bayou, Brendon K. Mitchell

ATU Scholars Symposium

The Slender Madtom (Noturus exilis) is a common species with a widespread distribution across the Mississippi River basin. In Arkansas, they can be found in upland rivers/streams in the Arkansas River and White River watershed. Very little data has been collected on the diet of this species and how it varies. We wanted to spatially assess the diet of Slender Madtoms. Slender Madtoms were sampled from 8 sites in the Illinois Bayou watershed using seines and kick nets. Small-scale gastric lavage was used to extract diet data from all individuals. All prey items were preserved and identified to the genus …

Microhabitat Use Of The Highland Darter (Etheostoma Teddyroosevelt) In The Illinois Bayou Watershed Of Arkansas, Colton W. Morris

ATU Scholars Symposium

Highland Darters (Etheostoma teddyroosevelt) are an Ozark regional endemic species, occurring in the Arkansas River and upper White River systems of Arkansas, Kansas, Oklahoma, and Missouri. There have been very few studies on this species, specifically those that have quantified the habitat use of this species across its range. A new study was needed to fill in the knowledge gap of microhabitat use by the Highland Darter in Arkansas. We wanted to address this knowledge gap by assessing the microhabitat use of this species in the Illinois Bayou watershed in Arkansas. Highland Darters were observed during snorkel surveys at known …

Mussel Communities Of Two Impacted Tributaries In The Arkansas South Central Plains Ecoregion, Jimmy Hall, Seth Drake, Parker Brannon, Savannah Wise

ATU Scholars Symposium

Anthropogenic influences such as mining and water quality degradation from wastewater effluents and agricultural runoff heavily impact freshwater mussel communities. The South-Central Plains (SCP) Ecoregion in Arkansas contains the Smackover Formation, an area that has been exploited for its oil with high frequency of drilling. In 1922 the Smackover pool in Union County was found and quickly became one of the world's most productive oil sites. Hurricane Creek and Smackover Creek, two tributaries within the Ouachita River basin, have experienced negative impacts from oil exploration and mining. However, to our knowledge, mussel communities in these creeks have not been assessed …

Habitat Suitability For Age-0 Lake Sturgeon In The Grand River, Benjamin D. Gunnett

Masters Theses

Lake sturgeon (Acipenser fulvescens) are a state-threatened species in Michigan and have become a focus for conservation. The lower Grand River is home to a remnant population of lake sturgeon between the 6th Street dam in downtown Grand Rapids and Lake Michigan. There has been limited research on age-0 lake sturgeon habitat use in low-gradient and more turbid rivers. To address this deficit, we developed a Habitat Suitability Index (HSI) for age-0 lake sturgeon based on prior literature in the Great Lakes. A HSI combines parameters representing in-stream habitat characteristics to score habitat suitability on a scale of 0-1, 0 …

Genomic Population Structure Of Great Hammerhead Sharks (Sphyrna Mokarran) Across The Indo-Pacific, Naomi L. Brunjes, Samuel M. Williams, Alexis L. Levengood, Matt K. Broadhurst, Vincent Raoult, Alastair V. Harry, Matias Braccini, Madeline E. Green, Julia L. Y. Spaet, Michael J. Travers, Bonnie J. Holmes

Fisheries Research Articles

Context

Currently, little information exists describing the population structure of great hammerhead sharks (Sphyrna mokarran) in Australian waters. Aims

This study used single nucleotide polymorphisms to investigate fine-scale population structure in S. mokarran across the Indo-Pacific. Methods

DNA was extracted from 235 individuals across six Australian locations and a Red Sea outgroup. Population parameters were calculated and visualised to test structuring across locations. Key results

No fine-scale population structuring was observed for S. mokarran across the Indo-Pacific. However, population structuring occurred for all Australian locations when compared to the Red Sea outgroup. Conclusions

Findings suggest a single stock …

The Social And Economic Dimensions Of One Of The World’S Longest-Operating Shark Fisheries, Matias Braccini, Maddison Watt, Clinton Syers, Nick Blay, Matthew Navarro, Michael Burton

Fisheries Research Articles

Context

Social and economic information is limited for coastal commercial and recreational fisheries, particularly shark fisheries, which are perceived as unsustainable and as targeting sharks for fins.

Aims

To characterise the social and economic dimensions of one of the world’s few long-standing sustainable shark fisheries.

Methods

We reviewed historic data and surveyed stakeholders to understand the economic and social dimensions of the shark fishery currently operating in Western Australia.

Key results

Since the fishery’s historic peak, there has been a substantial reduction in the number of operating vessels and ports due to management intervention. For the vessels that have remained, …

“It’S A No Brainer”: Ensuring Just Transitions In Iceland’S Fishing Industry, Olivia Bowers

Independent Study Project (ISP) Collection

Iceland’s government intends to achieve carbon neutrality by 2040, aiming to target various economic sectors and industries for increased renewable-energy usage. One of its most important plans revolves renewable-energy usage in the fishing industry, which accounts for almost 12% of the country’s GHG emissions. This study aims to understand the perspectives of different stakeholders concerning renewable energy in the fishing industry, using these opinions and existing literature to provide recommendations for a just, equitable, and achievable energy transition. Additionally, this study particularly focuses on the opinions of actors in Vestmannaeyjar, an island community of 4,300 with an especially vibrant, significant, …

A Deeper Dive Into Literature Published About Pinnipeds And Cetaceans Using The Five Domain Model, Aqsa Khan, Pedro Beltran

Posters - 2024

Research was conducted on cetaceans (whales and dolphins) (Figure 1) and pinnipeds (seals and sea lions) (Figure 2), focusing on five domains: nutrition, environment, health, behavior, and mental state. The goal was to identify the most discussed domain in existing literature. Specifically examining researchers' opinions on assessing the well-being of these marine mammals. After analyzing articles, hypotheses were formed suggesting that environmental factors are prominent for cetaceans, while behavior is the prominent domain for pinnipeds. To test these hypotheses, peer-reviewed articles were coded, providing both qualitative insights and quantitative representations of each domain's prevalence. The research uncovered the focal domains …

Time Series Modeling To Ascertain Age In Fisheries Management, Kathleen Sue Kirch

OES Theses and Dissertations

The ability to assign accurate ages of fish is important to fisheries management. Accurate ageing allows for the most reliable age-based models to be used to support sustainability and maximize economic benefit. Structures used to age include bones, scales, and most commonly ear bones (otoliths). Assigning age relies on validating putative annual marks by evaluating accretional material laid down in patterns in fish otoliths, typically by marginal increment analysis. These patterns often take the shape of a sawtooth wave with an abrupt drop in accretion yearly to form an annual band and are typically validated qualitatively. Researchers have shown keen …

Low Similarity Between Parasite Communities Of Ten Sympatric Carangid Species, Juan M. Osuna-Cabanillas, Emigdio Marín-Enríquez, Ana P. Martínez-Falcón, Juan T. Timi, Francisco N. Morales-Serna

Harold W. Manter Laboratory of Parasitology: Library Materials

Host phylogeny and ecological convergence are two factors thought to influence the structure of parasite communities. The aims of this study were to determine the diversity of metazoan parasites of 10 sympatric fish species of the family Carangidae from the southeastern Gulf of California, and to analyze their similarity at infracommunity and component community levels, in order to determine if the host species, particularly those congeneric with similar ecological characteristics, exhibit similar assemblages of parasites. In total, 874 fish specimens were examined and 40 parasite species were identified. The component community was composed by 21 parasite species in Caranx caninus …

Ecological Risk Assessment For The Western Australian Large Pelagic Fish Resource, Kimberley A. Smith, Paul Lewis, Kendra Travaille, Brett M. Crisafulli, Liv Rynvis, Gabby E. Mitsopoulos

Fisheries Research Reports

In December 2023, the Department of Primary Industries and Regional Development (DPIRD, the Department) convened an ecological risk assessment (ERA) of the fisheries that access the Statewide Large Pelagic Fish Resource (Resource). This Resource comprises a range of tropical and temperate species including mackerels, billfish, kingfish, cobia, mahi mahi and tunas. This document contains the background information used to support the ERA risk scoring process, scoring from the workshop and a summary of the workshop discussions that were relevant to the risk scoring. This includes an overview of Western Australian commercial fisheries that access the Resource, with a focus on …

Ecological Risk Assessment For The Western Australian Cephalopod Resource, Cameron J. Desfosses, Kimberley A. Smith, Lachlan W.S. Strain, Dave Murphy, Keyley Hogan-West, Daniel Yeoh, Shannon Burchert, Linda Wiberg, Bec Oliver, Brett M. Crisafulli, Gabby E. Mitsopoulos

Fisheries Research Reports

On 27 October 2023, the Department of Primary Industries and Regional Development (DPIRD, Department) convened an ecological risk assessment (ERA) of the fisheries that access the statewide Cephalopod Resource (Resource), which comprises a range of octopus, squid and cuttlefish species. This document contains the background information used to support the ERA risk scoring process, and a summary of the workshop discussions that were relevant to the risk scoring. The background information includes an overview of Western Australian commercial fisheries that access the Resource, focusing primarily on the Octopus Interim Managed Fishery (OIMF), Cockburn Sound Line and Pot Managed Fishery (CSLPMF), …

Fisheries Occasional Publication No.146 - Yabbie Aquaculture In Western Australia, March 2024, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

Policy relating to the assessment of yabbie aquaculture proposals and principles for assessment

Metropolitan Monitoring Program 2023, Alissa C. Tate, Lucy J. Rudd, Claire B. Smallwood, Karina L. Ryan

Fisheries Research Reports

Annual surveys of shore- and boat-based recreational fishers within the Metropolitan zone of the West Coast bioregion provide information on human dimensions and catch-per-fisher as well as mean length and weight of key recreationally caught species. For shore-based fishers, estimates of effort, catch and harvest are also presented for key nearshore species. This information is used to support ongoing assessments for key demersal and nearshore species and review the effectiveness of fisheries managements, such as Australian Herring and Southern Garfish.

A roving creel survey of shore-based fishers was used to collect data between Ocean Reef and Point Peron (30% of …

Variations In Life-History Traits In Exploited And Unexploited Populations Of Perth Herring (Nematalosa Vlaminghi): Evidence For Density-Dependent Growth?, Kimberley A. Smith, Sybrand Alexander Hesp, Peter Graham Coulson

Fisheries Research Articles

Results supported the hypothesis of faster growth in exploited populations because of density-dependent processes. Environmental factors may also have contributed to trait differences between populations.

Assessment Of The Status Of The Pilbara Demersal Scalefish Resource, Corey Wakefield, Ainslie Denham, Fabian Trinnie, Sybrand A. Hesp, Rachel Marks, Dion Boddington, Stephen J. Newman

Fisheries Research Reports

Executive Summary

For this assessment of the Pilbara Demersal Scalefish Resource (PDSR) of Western Australia, red emperor and bluespotted emperor are the indicator species used to represent the status of the resource. In addition, goldband snapper, though not an indicator species, is relatively abundant in the annual catches, particularly in deeper waters (around 100 m) and in the western Pilbara region and its status has also been assessed.

Long Term Sustainable Use Of Demersal Gillnet And Demersal Longline In Western Australia’S Temperate Shark Fisheries - Fisheries Research Report 340, Matias Braccini, Jack Parker, Daniela Waltrick, Maddison Watt, Nick Blay, Clinton Syers

Fisheries Research Reports

The Temperate Demersal Gillnet and Demersal Longline Fisheries (TDGDLF) are one of the main commercial shark fisheries in Australia. Most fishers in the TDGDLF use demersal gillnets to target sharks with scalefish taken in smaller amounts. Demersal longlines are also permitted but are not widely used. Demersal gillnets are size selective, but they do not necessarily discriminate among species, catching target and non-target species.

The Western Australian Fishing Industry Council (WAFIC) received funding as part of the Australian Government’s Our Marine Parks Grants Program to undertake research on the TDGDLF. This project was administered under the direction of a steering …

Fisheries Research Report No. 339: Assessment Of The Status Of The South Coast Demersal Scalefish Resource, Jeffrey V. Norriss, Sybrand A. Hesp, David V. Fairclough, Rubie Evans-Powell, B. Hancock, Emily A. Fisher, Tim Leary, Nick Jarvis

Fisheries Research Reports

This document provides the 2023 risk-based weight of evidence stock assessments for snapper, Bight redfish, hapuku, blue morwong, and Western blue groper for 2023 in the South Coast Bioregion (SCB).

Data Supporting The Journal Article: Aquatic Invasive Species Prevention In The Live Baitfish Trade: The Role Of Regulations, Education, And Inspections, Hannah Mulligan, Mark Kaemingk, Alison A. Coulter

NRM Departmental Data Sets

Data summery: Calculated values for regulations, education, and inspections that were compared among regions to determine focus on each preventative action.

File type: .xlxs
File size: 57kb

Animal Conservation In St. Louis, Kate O'Sullivan

Undergraduate Research Symposium

St. Louis has a multitude of organizations involved in the natural sciences. But how many of them actually contribute towards animal conservation? The St. Louis Zoo is an organization that focuses a lot of its effort on presentation, so how does that impact the funds that go towards actually saving the animals? I plan to dive into the different animal-based organizations in St. Louis and its surrounding areas, as well as discuss the positives and negatives of each organization. Furthermore, I will provide examples from several sources that I have been reviewing all year to support my claims. I plan …

Parental Environnement Influences Offspring Gene Expression In The Olympia Oyster, Ostrea Lurida., Mark S. Yeats

LSU Master's Theses

The Olympia Oyster is the only native oyster species on the Pacific coast of North America. Seasonality in water temperatures across this threatened species’ broad and fragmented range has been linked to its development, reproductive timing, reproductive activity, growth, and survival rates. Recent evidence suggests parental environments can have carry-over effects on larval growth and respiration rates in response to temperature. In this study, we utilized transcriptomic methods to identify the underlying mechanisms of this cross-generation plasticity. Sequence libraries of adult ctenidia tissue and pooled larval replicates were extracted and spawned from hatchery raised oysters of the same parentage immediately …

Puerulus Settlement Forecasting In A Harvest Strategy Evaluation Of The Rock Lobster Fishery In South Australia, Richard Mcgarvey, Adrian Linnane, John E. Feenstra, Janet M. Matthews, Lachlan J. Mcleay, Annabel Jones, Kyriakos Toumazos, Simon De Lestang

Fisheries Research Articles

Harvest strategies are utilised in the management of fishery resources globally. Critical to their success is harvest strategy evaluation, whereby future performance is assessed through projection modelling. Using the observed relationship between a puerulus settlement index and model-estimated recruitment, we evaluated a southern rock lobster (Jasus edwardsii) harvest strategy in South Australia. Short-to-medium puerulus settlement recruitment forecasting was incorporated into future projections of catch, catch per unit effort, and percent unexploited egg production (%UEP) during 2019–2022. Observed values of indicators that closely aligned with projected outputs indicated that puerulus forecasting underpinned reliable evaluation of future fishery performance. A …

Effect Of Dietary Phytase On Water And Fecal Prokaryotic And Eukaryotic Microbiomes In A Hybrid Tilapia (Oreochromis Aureus X O. Niloticus) Mixotrophic Biofloc Production System, Candis L. Ray, Jason Abernathy, Bartholomew Green, Adam Rivers, Kevin Schrader, Steven Rawles, Matthew Mcentire, Miles Lange, Carl Webster

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

In this study we evaluated feed and temporal effects on prokaryotic (16S) and eukaryotic (18S) microbiome dynamics in an outdoor mixotrophic biofloc system used to grow hybrid tilapia (Oreochromis aureus x O. niloticus) to market size. The dicalcium phosphate -free practical feed treated with 6-phytase (3000 FTU/kg; P-Free+ Phytase) and positive (Control) and negative (P-Free) control practical feeds used were formulated to contain 27.7% digestible protein and 4% lipid. Sex reversed, all-male hybrid tilapia (28.9 g/fish) were stocked (29 fish/m³) in 9 outdoor rectangular tanks (16.6 m³) and grown for 154 days. The …

Fisheries Research Report No. 346: West Coast Demersal Scalefish Resource Synopsis 2024, Emily A. Fisher, David Fairclough

Fisheries Research Reports

The West Coast Demersal Scalefish Resource (WCDSR) comprises over 100 species that inhabit inshore (20-250 m deep) and offshore ( > 250 m deep) waters of the West Coast Bioregion (WCB; north of Kalbarri to east of Augusta).

The WCB is predominantly a temperate oceanic zone with these waters influenced by the Leeuwin Current that transports warm, low-nutrient water southward along the western edge of the continental shelf.

To monitor and assess the WCDSR, indicator species have been selected using a risk-based approach that considers their inherent vulnerability to fishing, level of targeting and catch taken by fishers, and the amount …

An Overview Of Operational Welfare Indicators For Farmed Nile Tilapia (Oreochromis Niloticus), Bevin Meyer, Wasseem Emam

Aquaculture

Nile tilapia (Oreochromis niloticus) is the second-most widely farmed fish species globally, playing a critical role in food security and livelihoods, particularly in low- and middle-income countries. With the increasing global focus on the ethical and sustainable production of animal-source foods, the assessment and improvement of fish welfare in aquaculture systems has become a priority. This report provides a structured review of operational welfare indicators (OWIs) that can be used to assess the on-farm welfare of Nile tilapia across various production systems. Drawing on a broad range of scientific literature and industry practices, the report categorises OWIs into …

Determining The Applicability Of Milkfish (Chanos Chanos) For Skin Grafting Through Microbiological And Histological Evaluations, Janice A. Ragaza, Bianca Patrice Go

Ateneo Aquatic and Fisheries Resources Laboratory

Tilapia fish skin, rich in Type I collagen, has been shown to accelerate wound healing, reduce infection rates, and create an optimal environment for wound care. However, the potential application of other fish species, like milkfish, for skin grafting remains underexplored. Milkfish (C. chanos), an economically significant species in the Philippines, could expand the donor pool for fish skin grafting, addressing the accessibility issues in resource-limited regions where traditional graft materials may be costly or scarce. The current study investigates the feasibility of applying tilapia fish skin sterilization techniques to milkfish skin. Collected and prepared milkfish skin was …

Retention Of P-Chip Microtransponders And Post-Tagging Survival Of Small-Bodied Stream Fishes, J. Spooner, Jonathan J. Spurgeon

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Reduced Representation Sequencing Reveals Weak Genetic Differentiation Between Canadian And European Larus Hyperboreus (Glaucous Gull), E. Lachance Linklater, Sarah A. Sonsthagen, G. J. Robertson, L. Colston-Nepali, F. Vigfusdottir, V. L. Friesen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.