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Fluctuations In Chinook Salmon (Oncorhynchus Tshawytscha) Counts At Three Lower Columbia River Spawning Sites, Eric Michael Loomis

UNLV Theses, Dissertations, Professional Papers, and Capstones

Several hypotheses were developed to explore the pronounced increase in Chinook salmon (Oncorhynchus tshawytscha) returning to spawning grounds at the Cowlitz, Kalama, and Lewis Rivers, three tributaries of the lower Columbia River. The study was conducted using data compiled over a ten-year span from 1991-2001. Preliminary indications are that trends in climate are linked to these increases, with the absence of El Niño events and fluctuations in winter precipitation as likely explanations of these phenomena. The unique nature of Chinook life cycles causes them to utilize a variety of habitats that require ideal conditions for maximum survival rates. Correlations between …

Fisheries Research Report No. 140 - The Western Rock Lobster Fishery 1997/98 To 1998/99, C F. Chubb, E H. Barker

Fisheries Research Reports

This report is the latest in a series covering the West Coast Rock Lobster Managed Fishery (formerly the West Coast Rock Lobster Limited Entry Fishery), Western Australia’s largest and most valuable fishery. These reports form an historical record of fishery data and information documented season by season for use by industry and research personnel now and in the future. The reports provide information on catch, fishing effort and biology; value of the product and licences; input costs (fuel, bait, etc.); changes in fishing practices, gear, technology and boats and management/legislative changes. By necessity, the information contained herein is summarised from …

Male Reproductive Dynamics In The Caribbean Spiny Lobster Panulirus Argus, Jamie S. Heisig

Biological Sciences Theses & Dissertations

The population size structure of the Caribbean Spiny Lobster, Panulirus argus, in the Florida Keys, Florida (USA) has undergone a dramatic shift as a result of fishing pressure on the large individuals of the population. Male lobsters are affected most by fishing because of sexual dimorphism in size and other studies have shown that male size has direct impacts on reproductive output (i.e., number of fertilized eggs/clutch) that are independent of female size. To assess more precisely the impact of male size on fertilization success, I conducted laboratory experiments and field observations to examine various male reproductive attributes over …

The Ecological Ramifications Of Disease And Density In The Caribbean Spiny Lobster, Panulirus Argus, Donald C. Behringer Jr.

Biological Sciences Theses & Dissertations

In 1999, I discovered the first virus known to be pathogenic to any species of lobster. HLV-PA is a pathogenic herpes-like virus that infects juvenile Caribbean spiny lobster, Panulirus argus, in the waters off south Florida (USA), and it alters the behavior and ecology of this species in fundamental ways. Gross signs of HLV-PA infection are lethargy, morbidity, cessation of molting, and discolored, “milky” hemolymph that does not clot. HLV-PA infects the hemocytes of host lobsters, specifically the hyalinocytes and semi-granulocytes, but not the granulocytes. When hemolymph from infected donors was injected into healthy juvenile lobsters, 90% of the …

Empirical Orthogonal Function Analysis Of Avhrr Sea Surface Temperature Patterns In Taiwan Strait, Ming-An Lee, Ching-Dong Yeah, Chao-Hsiung Cheng, Jui-Wen Chan, Kuo-Tien Lee

Journal of Marine Science and Technology–Taiwan

Empirical orthogonal function (EOF) analysis was used to study a time-series of the Advanced Very High Resolution Radiometer (AVHRR) imageries from the waters of Taiwan Strait to examine the temporal and spatial characteristics and to determine the dominant pattern of sea surface temperature (SST) variability for 72 months from January 1996 to December 2001. The spatial variance was consistent with a quasi-permanent front at the Chang-Yuen Ridge in winter and associated with strong temperature contrast to the Kuroshio branch or the South China Sea Warm Current. It also displayed a cool water plume extending from the Peng-Hu Islands to Formosa …

Fisheries Research Report No. 144 - Frdc Project 1998/302 - Rock Lobster Enhancement And Aquaculture Subprogram: Towards Establishing Techniques For Large Scale Harvesting Of Pueruli And Obtaining A Better Understanding Of Mortality Rates, Bruce F. Phillips, Roy Melville-Smith, Mark Rossbach, Yuk W. Cheng, Nick Caputi, Adrian Thomson

Fisheries Research Reports

No abstract provided.

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 30 March Through 11 October 2002. Supplement I, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 30 March through 11 October 2002. This is the third of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 42,000 hours fishing the Missouri River from Bellevue (rkm 967.7) to Camp Creek (rkm 883.5) during the survey period. Effort was steady from late spring (4/27 …

Identifying Nursery Areas Used By Inner Bay And Oceanic Pink Snapper ( Pagrus Auratus) To The Effect Of Prawn Trawling On Inner Bay Snapper Stocks - Final Report For Frdc Project 2001/061, D. J. Gaughan, Michael J. Moran, Melinda M. Ranaldi, John R. Watling

Fisheries Research Contract Reports

Final Report for FRDC Project 2001/061

Pink snapper (Pagrus auratus) is the main commercial and recreational finfish (Kailola et al., 1993) in the Shark Bay region. Pink snapper are distributed along much of the temperate and tropical coasts of Western Australia from east of Esperance on the south coast to north of Shark Bay on the west (Paulin 1990). Previous research using genetics (Johnson et al. 1986), tagging (Moran et al. 2004), and otolith microchemistry (Edmonds et al., 1989, 1999) have shown that pink snapper from the innermost parts of Shark Bay do not mix with the ocean fish

Juvenile …

Fisheries Statutory Management Authority Inquiry Background Paper, H. G. Brayford

Fisheries Management Papers

The objective of this paper is to provide factual background to the issues that are likely to be relevant to the Advisory Committee’s considerations and to the interests of stakeholders. It also pulls together relevant reference material and experiences from within WA and from other fisheries jurisdictions in Australia.

Abiotic Factors Influencing The Breeding, Movement, And Foraging Of The Eastern Spadefoot (Scaphiopus Holbrookii) In West Virginia, Keith A. Johnson

Theses, Dissertations and Capstones

Haphazard searches and telemetry methods were used to track movements and habitat use of two recently discovered and only known populations of Scaphiopus holbrookii in West Virginia. It was the purpose of this study to determine the home range and habitat use of S. holbrookii. Toads were found to forage a mean distance of 13.5 in. (34.5 cm) from their burrows. Habitat consisted of open areas with soil textures of sandy loam, loamy sand, or sand. Radio- transmitters were surgically implanted in two specimens from one breeding site to provide data about habitat use and emergence. Data loggers were installed …

An Ecosystem-Based Approach To Management: Using Individual Behaviour To Predict The Indirect Effects Of Antarctic Krill Fisheries On Penguin Foraging, Suzanne H. Alonzo, Paul Switzer, Marc Mangel

Faculty Research & Creative Activity

Summary 1. Changes in species' abundance and distributions caused by human disturbances can have indirect effects on other species in a community. Although ecosystem approaches to management are becoming increasingly prevalent, they require a fuller understand- ing of how individual behaviour determines interactions within and between species. 2. Ecological interactions involving krill are of major importance to many species within the Antarctic. Despite extensive knowledge of the ecosystem that they occupy, there is still incomplete understanding of the links between species and the effect of environmental conditions on these interactions. In this study, we extended a behavioural model used previously …

Ecological Games In Space And Time: The Distribution And Abundance Of Antarctic Krill And Penguins, Suzanne Alonzo, Paul Switzer, Marc Mangel

Faculty Research & Creative Activity

The distribution and abundance of organisms are affected by behaviors, such as habitat selection, foraging, and reproduction. These behaviors are driven by interactions within and between species, environmental conditions, and the biology of the species in-volved. Although extensive theoretical work has explored predator–prey dynamics, these models have not considered the impact of behavioral plasticity and life-history trade-offs on predicted patterns. We apply a modeling method that allows the consideration of a spatial, dynamic ecological game between predators and prey using a life-history perspec-tive. As an illustrative example, we model the habitat selection of Antarctic krill and penguins during the time …

Breeding Season Avifauna Of Prairie Dog Colonies And Non-Colonized Areas In Shortgrass Prairie, Stephen L. Winter, Jack Cully Jr., Jeffrey Pontius

United States Fish and Wildlife Service: Publications

Avian assemblages of black-tailed prairie dog (Cynomys ludovicianus) colonies were compared to those present at two types of non-colonized grassland, during the breeding season, in southwestern Kansas and southeastern Colorado. Relative abundances were quantified in 1996 during a period of drought and in 1997 during a period of above average precipitation. We detected fewer bird species at all sites in 1996 than in 1997, and the total number of bird species detected on prairie dog colonies was lower than that detected on both types of non-colonized areas during both years. Homed larks (Eremophila alpestris) had higher …

Development Of A Gis Geodatabase As A Tool For Analyzing Spatial Relationships In The Species Distributions Of West Virginia Fishes, Nathan D. Bowe

Theses, Dissertations and Capstones

One of the most complete references to date of fish species distribution in West Virginia is a 1995 book entitled “The Fishes of West Virginia” (Stauffer, et al.). In this project, geographic information systems (GIS) and relational database technology have been utilized to adapt that reference into a system where spatially arranged collection site features are related to distribution data through a series of common fields among tables in a geodatabase. The geodatabase is stored in an MDB-formatted database management system (DBMS) which is readable by Microsoft Access and useful in its own right as a means to query distribution …

Ecological Games In Space And Time: The Distribution And Abundance Of Antarctic Krill And Penguins, Suzanne H. Alonzo, Paul V. Switzer, Marc Mangel

Faculty Research & Creative Activity

The distribution and abundance of organisms are affected by behaviors, such as habitat selection, foraging, and reproduction. These behaviors are driven by interactions within and between species, environmental conditions, and the biology of the species in-volved. Although extensive theoretical work has explored predator–prey dynamics, these models have not considered the impact of behavioral plasticity and life-history trade-offs on predicted patterns. We apply a modeling method that allows the consideration of a spatial, dynamic ecological game between predators and prey using a life-history perspec-tive. As an illustrative example, we model the habitat selection of Antarctic krill and penguins during the time …

An Ecosystem-Based Approach To Management: Using Individual Behaviour To Predict The Indirect Effects Of Antarctic Krill Fisheries On Penguin Foraging, Suzanne Alonzo, Paul Switzer, Marc Mangel

Faculty Research & Creative Activity

Summary 1. Changes in species' abundance and distributions caused by human disturbances can have indirect effects on other species in a community. Although ecosystem approaches to management are becoming increasingly prevalent, they require a fuller understand- ing of how individual behaviour determines interactions within and between species. 2. Ecological interactions involving krill are of major importance to many species within the Antarctic. Despite extensive knowledge of the ecosystem that they occupy, there is still incomplete understanding of the links between species and the effect of environmental conditions on these interactions. In this study, we extended a behavioural model used previously …

Morphology Of The Spores Of Myxosoma Cerebralis (Hofer, 1903) And M. Cartilaginis (Hoffman, Putz, And Dunbar, 1965)*, Glenn L. Hoffman, Jiří Lom

United States Fish and Wildlife Service: Publications

The spore of Myxosoma cerebralis is redescribed and compared with that of a close relative, M. cartilaginis. M. cerebralis is smaller, with greater variability in size and shape. It possesses a mucous envelope whereas M. cartilaginis does not. The surface architecture of M. cerebralis, as seen with the scanning electron microscope, differs in possessing a conspicuous circumsutural groove, prominent polar filament pores, and a mucous envelope.

Feasibility Study On Nonnative Fish Removal In The Lower Little Colorado River, Pam Sponholtz

United States Fish and Wildlife Service: Publications

This section provides insight into the relationship between the proposed action and the Adaptive Management Program goals and objectives, Recovery Goals for the humpback chub, and the Biological Opinion RPAs on Glen Canyon Dam operations.

Bull Trout Salvelinus Confluentus

United States Fish and Wildlife Service: Publications

Bull trout are members of the char subgroup of the salmon family (salmonids), which also includes the Dolly Varden, lake trout and Arctic char. Bull trout living in streams grow to about 4 pounds while those in lake or large river environments can weigh more than 20 pounds.

Biologists distinguish char from other salmonids such as trout and salmon by
the absence of teeth in the roof of the mouth, the presence of light-colored spots on a dark background (trout and salmon have dark spots on a lighter background), the absence of spots on the dorsal fin, their …

An Ecological Study Of The Spotted Salamander, Ambystoma Maculatum, And Jefferson Salamander, A. Jeffersonianum, In West Virginia, Seth J. Myers

Theses, Dissertations and Capstones

The movements of Spotted Salamanders, Ambystoma maculatum, and Jefferson Salamanders, A. jeffersonianum, in and out of an ephemeral wetland in West Virginia were monitored for one breeding season using a drift fence lined with funnel traps. Significant movements of A. jeffersonianum coincided with rainfall and maximum daily air temperatures reaching a minimum of 5° C. Significant movements of A. maculatum coincided with rainfall and maximum daily air temperatures of at least 10° C. A. jeffersonianum preceded A. maculatum to the breeding site. Males of both species preceded females. The mark-recapture estimate of A. maculatum is 67 males and 25 females. …

Winter Ecology Of Kokanee: Implications For Salmon Management, G. B. Steinhart, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

We sampled various limnological parameters and measured growth and diet of age-0 kokanee Oncorhynchus nerka (lacustrine sockeye salmon) during two winters in a high-mountain lake of the Sawtooth Valley, Idaho. Although winter has been recognized as an important period for many warmwater fishes and for stream-dwelling salmonids, winter limitations have only recently been studied for coolwater and coldwater species. Ice and snow cover in winter limited light penetration. As a result, chlorophyll-a and zooplankton density were lower in ice-covered periods than during ice-free periods. The weight of stomach contents was often below a maintenance ration, yet the incidence of empty …

Demographic Assessment Of The Blue Crab (Callinectes Sapidus) In Chesapeake Bay Using Extractable Lipofuscins As Age Markers, Se-Jong Ju, David H. Secor, H. Rodger Harvey

OES Faculty Publications

The blue crab (Callinectes sapidus) plays an important economic and ecological role in estuaries and coastal habitats from the Gulf of Mexico to the east coast of North America, but demographic assessments are limited by length-based methods. We applied an alternative aging method using biochemical measures of metabolic byproducts (lipofuscins) sequestered in the neural tissue of eyestalks to examine population age structure. From Chesapeake Bay, subsamples of animals collected from the 1998-99 (n-769) and 1999-2000 (n=367) winter dredge surveys were collected and lipofuscin was measured. Modal analysis of the lipofuscin index provided separation into three modes, whereas carapace-width …

Isolation And Characterisation Of A Pax Group Iii Gene From The Freshwater Crayfish Cherax Destructor: Implications For The Evolution Of Muscle Regeneration, Robert B. White

Theses : Honours

Pax genes encode transcription factors that are highly evolutionarily conserved and are vital for animal development. Vertebrate Pax group III genes Pax3 and Pax7 are required for proper development of muscular and central nervous systems. In their roles in muscular systems, Pax3 and Pax7 specify myoblasts (muscle progenitor cells). Pax3 is predominantly involved in embryonic myogenesis and specifies embryonic myoblasts. In contrast, Pax7 specifies adult myoblasts (muscle satellite cells), and has been demonstrated to be vital for adult muscle regeneration. Recent evidence also implicates a role for Pax7 in the conversion of certain stem cells to the myogenic lineage. The …

A Guide To Prairie And Wetland Restoration In Eastern Nebraska, Gerry Steinauer, Bill Whitney, Krista Adams, Mike Bullerman, Chris Helzer

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This publication documents the restoration methods originally developed by Bill Whitney and later refined by himself and other ecologists from TNC, PRCT, NGPC and USFWS working in eastern Nebraska. Restoration of the following plant community types is covered in this document: tallgrass prairie, mixed-grass prairie, sand prairie, freshwater wet meadow and marsh, Rainwater Basin wet meadow and marsh, and saline wet meadow and marsh.

The methods we use are generally affordable and not complicated. To quickly summarize, we handpick and machine harvest seed, do little seed cleaning and broadcast plant with a fertilizer spreader. We do not mow annual weeds …

2003 Survey Of Priority Natural Communities In Jefferson County, Nebraska, Robert F. Steinauer

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This survey was undertaken to update information on native plant communities and wildlife habitats in Nebraska to facilitate the development of the Nebraska Game and Parks Commission’s (NGPC) Comprehensive Wildlife Plan. The specific intent of the project was to identify and map all large blocks of privately owned native plant communities within the survey area. In 2003, the surveys focused on eastern Nebraska, specifically deciduous forest communities along the Missouri River, tallgrass prairies of southeastern Nebraska (Pawnee, Gage, Jefferson, and eastern Thayer counties), and loess mixed-grass prairies in central Nebraska. A brief survey of the Elkhorn River valley in Madison …

Experimental Mycobacteriosis In Striped Bass Morone Saxatilis, D. T. Gauthier, M. W. Rhodes, W. K. Vogelbein, H. Kator, C. A. Ottinger

Biological Sciences Faculty Publications

Striped bass Morone saxatilis were infected intraperitoneally with approximately 10⁵ Mycobacterium marinum, M. shottsii sp. nov., or M. gordonae. Infected fish were maintained in a flow-through freshwater system at 18 to 21°C, and were examined histologically and bacteriologically at 2, 4, 6, 8, 17, 26, 36 and 45 wk post-infection (p.i.). M. marinum caused acute peritonitis, followed by extensive granuloma development in the mesenteries, spleen and anterior kidney. Granulomas in these tissues underwent a temporal progression of distinct morphological stages, culminating in well-circumscribed lesions surrounded by normal or healing tissue. Mycobacteria were cultured in high numbers from …

Hydrodynamic Stability Of Swimming In Ostraciid Fishes: Role Of The Carapace In The Smooth Trunkfish Lactophrys Triqueter (Teleostei : Ostraciidae), Ian K. Bartol, Morteza Gharib, Daniel Weihs, Paul W. Webb, Jay R. Hove, Malcolm S. Gordon

Biological Sciences Faculty Publications

The hydrodynamic bases for the stability of locomotory motions in fishes are poorly understood, even for those fishes, such as the rigid-bodied smooth trunkfish Lactophrys triqueter, that exhibit unusually small amplitude recoil movements during rectilinear swimming. We have studied the role played by the bony carapace of the smooth trunkfish in generating trimming forces that self-correct for instabilities. The flow patterns, forces and moments on and around anatomically exact, smooth trunkfish models positioned at both pitching and yawing angles of attack were investigated using three methods: digital particle image velocimetry (DPIV), pressure distribution measurements, and force balance measurements. Models …

Do Size Differences Of Juvenile Snapper (Pagrus Auratus) In Two Regions Of Shark Bay, Western Australia, Reflect Different Environmental Conditions, Nadia Tapp

Theses: Doctorates and Masters

Aspects of the population biology of juvenile Pagrus auratus in the western gulf of Shark Bay, Western Australia, were investigated to explore the causes of an observed size difference between 0+ fish (first year of life) in the northern and southern regions of that gulf. Five trawl surveys were conducted in each region of the western gulf, from November 2000 to December 2001, to collect juvenile P. auratus. The 0+ fish from the northern region were found to be consistently greater in length by between 10 and 20mm LCF, than those in the southern region, thereby confirming those observed size …

Fisheries Research Report No. 142 - Identifying The Development Stages Of Preserved Eggs Of Snapper, Pagrus Auratus, From Shark Bay, Western Australia, J. Norriss, Gary Jackson

Fisheries Research Reports

The characteristics used to identify 19 developmental stages of preserved eggs of snapper, Pagrus auratus, collected from Shark Bay, Western Australia, during annual plankton surveys, are described and illustrated. A key is provided to enable the age of each egg stage to be estimated based on sea surface temperature and salinity observed during sampling. This report is intended as a reference for inexperienced staff, to ensure that between-year comparisons of snapper spawning biomass, estimated using the daily egg production method, are based on consistent egg staging and ageing methods.

Fisheries Research Report No. 143 - Methods Used In The Collection, Preparation And Interpretation Of Narrow-Barred Spanish Mackerel (Scomberomorus Commerson) Otoliths For A Study Of Age And Growth In Western Australia, Paul Lewis, M. C. Mackie

Fisheries Research Reports

The narrow-barred Spanish mackerel (Scomberomorus commerson) is wide ranging throughout the Indo-West Pacific region where it has been the subject of various age and growth studies. Methods used in these studies have varied considerably and in some cases may have led to misleading conclusions. The purpose of this report, therefore, is to document in detail the methods used in determining the age and growth during a FRDC funded stock assessment of the species in the waters off Western Australia. These methods are considered to optimise the collection, processing, accuracy of microincrement counts, and interpretation of the annuli in both whole …