Aquaculture and Fisheries Commons^™

Leatherback Hatchling Fitness, Violet Campbell, Shane Morales, Kelly Stewart

STAR Program Research Presentations

Leatherback hatchling fitness on land is essential for their success in entering the ocean without being predated. Two ways fitness on land may be measured are by how fast hatchlings crawl as well as how fast their righting responses are when they are flipped onto their carapaces. Hatchlings from certain nests have slower righting response times along with slower crawl times, both of which would increase the odds of predation and hinder the success of hatchlings reaching the ocean.

Hatchling crawling speed was determined by timing 12 randomly selected hatchlings from each nest to crawl a distance of two meters. …

The Effects Of Calcium Concentration And Food Levels On Daphnia, Fawn Goodberry

Biology Theses

Many physiological processes of Daphnia are negatively affected at low calcium concentrations. The concentration of calcium within lake water influences how Daphnia populations will survive and reproduce in natural environments. An experiment was designed to test the effects of calcium concentration and food level on the growth and reproduction of a Daphnia hybrid. Daphnia pulex x Daphnia pulicaria were reared in a soft water medium at three calcium concentrations (2.5mg/L, 1.0mg/L, 0.50mg/L) and high and low food levels (5.6 x 10⁵ and 5.6 x 10⁴ cells of the algae Ankistrodesmus sp.) in a 2 x 3 factorial …

Shovelnose Sturgeon Reproductive Ecology In The Lower Platte River, Nebraska, Mathew L. Rugg

School of Natural Resources: Dissertations, Theses, and Student Research

Biodiversity and abundance of freshwater organisms are experiencing drastic declines. Anthropogenic disturbances have altered the natural flow regimes of large rivers, and have led to declines in species that rely on elements of natural flow. Similarly, shovelnose sturgeon distribution has diminished in the last 100 years due to habitat alteration, overharvest, and water contamination. To fully understand the status and viability of a fish population, basic knowledge of a fish’s reproductive strategy is needed. Aspects of reproduction that should be understood to manage for sustainability include maturation, fecundity, and spawning dynamics. There is currently little published information on age/size of …

Exploitation Of Channel Catfish In Nebraska Flood-Control Reservoirs, Christopher Lee Wiley

School of Natural Resources: Dissertations, Theses, and Student Research

Channel catfish Ictalurus punctatus, is a popular sportfish in North America, and is the third most-sought fish species in Nebraska. Exploitation rates of channel catfish populations have been estimated to be substantial in states neighboring Nebraska. Despite the popularity of channel catfish, little is known about the exploitation of channel catfish populations in Nebraska. The objectives of this study were to estimate the exploitation rates of channel catfish populations, identify the length bias of angling for channel catfish, and identify the self-imposed length limits for channel catfish at flood-control reservoirs of Nebraska. The software package Program Mark was used to …

James’S Rule And Causes And Consequences Of A Latitudinal Cline In The Demography Of John’S Snapper (Lutjanus Johnii) In Coastal Waters Of Australia, Mike Cappo, Ross J. Marriott, Stephen J. Newman

Fisheries Research Articles

Demographic parameters were derived from sectioned otoliths of John’s Snapper (Lutjanus johnii) from 4 regions across 9° of latitude and 23° of longitude in northern Australia. Latitudinal variation in size and growth rates of this species greatly exceeded longitudinal variation. Populations of John’s Snapper farthest from the equator had the largest body sizes, in line with James’s rule, and the fastest growth rates, contrary to the temperature size rule for ectotherms. A maximum age of 28.6 years, nearly 3 times previous estimates, was recorded and the largest individual was 990 mm in fork length. Females grew to a larger mean …

West Coast Demersal Scalefish Allocation Report., Integrated Fisheries Allocation Advisory Committee.

Fisheries Management Papers

Integrated Fisheries Management (IFM) is an initiative aimed at addressing the issue of how fish resources in WesternAustralia can be best shared between competing users within the broad context of “Ecologically Sustainable Development”, or ESD, so that they can be managed on a sustainable basis.

The Minister for Fisheries established the Integrated Fisheries Management Allocation Advisory Committee (the Allocation Committee), under Section 42 of the Fish Resources Management Act 1994 (FRMA), in 2004 to investigate IFM resource allocation issues and make recommendations to him on optimal resource use.

Policy On Restocking And Stock Enhancement In Western Australia, Department Of Fisheries Western Australia.

Fisheries Management Papers

The practice of releasing hatchery-reared fish into existing populations to augment fishing (stock enhancement) or restore depleted spawning biomass (restocking) has occurred around the world for decades with varying degrees of success. The underpinning concept is to produce and release fish into wild populations to increase their abundance, catch rates and/or fishery yields

If restocking and stock enhancement activities are to be successful, they should have clear objectives and be well planned and targeted at situations where there is a reasonable expectation of having a beneficial effect.

In-Water Hull Cleaning And Filtration System: In-Water Cleaning Trials, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Fish Species Distribution In Seagrass Habitats Of Chesapeake Bay Are Structured By Abiotic And Biotic Factors, Jason J. Schaffler, Jacques Van Montfrans, Cynthia M. Jones, Robert J. Orth

OES Faculty Publications

Seagrass habitats have long been known to serve as nursery habitats for juvenile fish by providing refuges from predation and areas of high forage abundance. However, comparatively less is known about other factors structuring fish communities that make extensive use of seagrass as nursery habitat. We examined both physical and biological factors that may structure the juvenile seagrass-associated fish communities across a synoptic-scale multiyear study in lower Chesapeake Bay. Across 3years of sampling, we collected 21,153 fish from 31 species. Silver Perch Bairdiella chrysoura made up over 86% of all individuals collected. Nine additional species made up at least 1% …

In-Water Hull Cleaning System Cost & Cost Benefit Analysis, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Guidance Statement For Oil And Gas Industry Consultation With The Department Of Fisheries, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Brief 8: International Fisheries Governance That Works: The Case For A Global Fisheries Organization, J. Samuel Barkin, Elizabeth R. Desombre

Governance and Sustainability Issue Brief Series

International fisheries are being overexploited, and the current institutional structure in place to manage them is not working effectively. Presently, two sets of intergovernmental institutions oversee global fishing. The first comprises roughly three dozen regional fisheries management organizations (RFMOs), approximately 19 of which are charged with regulating fishing in the areas they oversee. The second set consists of global organizations that touch on but do not directly regulate fisheries issues, such as the United Nations Food and Agriculture Organization (FAO), the World Trade Organization (WTO), the World Bank, and the International Maritime Organization (IMO). This management patchwork is inadequate to …

A Survey Of Aquatic Invertebrate Communities In Nebraska Sandhill Lakes Reveals Potential Alternative Ecosystem States, J.C. Jolley, E.S. Albin, M.A. Kaemingk, D.W. Willis

Natural Resource Management Faculty Publications

Aquatic invertebrate communities are important to shallow lake ecosystem form and function, providing vital components to the food web and thereby important to achieving lake management goals. We characterized lake invertebrate communities and physicochemical variables in six Nebraska Sandhill lakes and examined these characteristics within an alternative stable state framework. Surveys were conducted during 2005 within each of these lakes by sampling aquatic macroinvertebrate abundance, zooplankton abundance and biomass, phytoplankton biomass, and physicochemical variables. When placed within an alternative stable state framework, the response variables exhibited a gradient of different ecosystem states. Two lakes appeared congruent with the clear water …

Validation Of Antibodies Used To Study Hypoxia Inducible Factors In Two Species Of Fundulus, Jenna D. Hill

LSU New Orleans Theses and Dissertations

Hypoxia inducible factors (HIFs) are transcription factors and the master regulators of oxygen-dependent gene expression in animals. The focus of this thesis is the distribution of HIF protein in tissues of the fish Fundulus heteroclitus and F. grandis, two widespread species that occur in naturally hypoxic waters. Polyclonal antibodies against HIF-1α, HIF-2α, and HIF-3α were tested on proteins made in vitro and on extracts made from several tissues of normoxic and hypoxic fish. Antibodies against HIF-1α and 3α bound specifically to full length protein made in vitro, and produced bands on western blots of nuclear extracts of near …

Comparison Of Topographic Surveying Techniques In Streams, Sara G. Bangen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Bonneville Power Administration (BPA) Fish and Wildlife Program (FWP) mitigates impacts, including mortality, from hydroelectric dams in the Columbia River Basin for ESA-listed salmon and steelhead populations and other species of special concern. Given the extensive economic resources invested in mitigation and the incredible diversity of in-stream habitat across the Columbia River basin, questions have arisen about which sampling strategies are most tractable across the entire Columbia River Watershed, but also produce datasets that allow researchers to answer meaningful questions about salmonid populations and trends in habitat. In response to these issues, the NOAA Integrated Status and Effectiveness Monitoring …

Colorado River Cutthroat Trout Habitat Resistance And Resilience To Climate Change, Kate H. Olsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Government agencies and private organizations spend large amounts of public money attempting to return ecosystems to a more natural state, which have often been harmed or even destroyed as a result of modern development. Colorado River cutthroat trout, Oncorhyncus clarki pleuriticus, are a subspecies of cutthroat trout. Cutthroat trout live in the Rocky Mountains of the western United States. The population of this particular subspecies has been severely reduced by human actions, and currently only 12% of its historic populations still exist. To improve the condition of cutthroat trout, fisheries professionals and biologists are working to restore natural populations. …

Effects Of Environmental Variables On The Reproduction Of Quagga Mussels (Dreissena Rostriformis Bugensis) In Lake Mead, Nv/Az, Richard Steven Ianniello

UNLV Theses, Dissertations, Professional Papers, and Capstones

In 2007, quagga mussels (Dreissena rostriformis bugensis) were found in Lake Mead and have spread downstream on the Colorado River and to other lakes and reservoirs in the Southwestern United States. The quagga mussel's extremely quick colonization of Lake Mead and annual veliger abundance trends provide evidence that the quagga mussels in the Southwest have different reproductive behavior than in previous habitats. This study is one of the first to specifically examine quagga mussel reproduction in the Southwest and examines how quagga mussel reproduction varies at sites known to have different temperatures and other environmental variables resulting from the input …

Comparing Aggression Levels In Jack Dempsey Cichlids Based On Variation Of Haitat Structure, Johnne' Beaty, Bethany Sobray, Rachael Greer

Undergraduate Research Conference

Jack Dempsey cichlids, Rocio octofasciata, are native to South America and known for their aggressive behaviors. These fish are popular in freshwater aquariums, but can act aggressively towards other fish. In many species of fish individuals may behave aggressively to defend resources and the decision to defend these resources depends on factors such a habitat complexity (Oldfield 2011). Cichlids thus need ample room to maintain individual territories. Behavioral patterns in other species of cichlids have observed that the establishment of territories is constantly changing (Dijkstra et al. 2009). Individuals use information such as habitat complexity to adapt to environments, even …

Mechanisms Of Freeze Avoidance In Eggs Of The Antarctic Naked Dragonfish (Gymnodraco Acuticeps) And Atlantic Tomcod (Microgadus Tomcod), Jeremy M. Carlson

Student Honors Theses

A remarkable number of marine teleosts belonging to the perciform suborder Notothenioidei and the paracanthopterygian suborder Gadoidei (cods and their allies) have evolved biophysical and physiological adaptations that promote freeze avoidance to temperatures as low as 1oC below the equilibrium freezing point of their body fluids (Cheng et al. 2003; Costanzo et al. 1995; Howes 1991; Raymond and DeVries 1977). Among the Notothenioids endemic to the Antarctic Ocean, the naked dragonfish (Gymnodraco acuticeps, Figure 1) inhabits the ice-laden waters near McMurdo Sound where the annual water temperature remains stable at -1.87 ± 0.1oC (Komatsu et al. 1970; Bargelloni et al. …

Bioremediation Mariculture In Zanzibar, Tanzania: A Viability Assessment Of Using Bath Sponge And Pearl Oyster Farms To Filter Highly Olluted Waters In The Zanzibar Channel, Hayley Oakland

Independent Study Project (ISP) Collection

Bioremediation of polluted water off the coastline of the urban center of Zanzibar—Stone Town, Unguja—was assessed for implementation feasibility through bath sponge and pearl oyster mariculture. A vast research base of the city’s coastal area exists, including the pollution concentrations at various locations, the ramifications of this pollution on the fringing ecosystems, and the relevant water circulation system of eddies and passageways produced by the north flowing East African Counter Current. In following the experimental examples of bioremediation projects around the world, this study tested facets of the filtration abilities of marine sponges and oysters. Both organisms suggested strong pollution …

Review Of The Negative Influences Of Non-Native Salmonids On Native Fish Species, Kelly C. Turek, Mark A. Pegg, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Non-native salmonids are often introduced into areas containing species of concern, yet a comprehensive overview of the short- and long-term consequences of these introductions is lacking in the Great Plains. Several authors have suggested that non-native salmonids negatively influence species of concern. The objective of this paper is to review known interactions between non-native salmonids and native fishes, with a focus on native species of concern. After an extensive search of the literature, it appears that in many cases non-native salmonids do negatively influence species of concern (e.g., reduce abundance and alter behavior) via different mechanisms (e.g., predation and competition). …

Comparative Phylogeography Of The Emperor Snappers Lethrinus Lentjan And Lethrinus Harak (Lethrinidae: Percoidei) In The Coral Triangle, Andrew B. Hines

Biological Sciences Theses & Dissertations

Many questions remain regarding the origins of the well-known peak in marine biodiversity found in the Coral Triangle. Barriers to gene flow may promote lineage diversification and provide the potential for speciation contributing to the high biodiversity in this area. Population structure was examined in two species of Emperor Snappers (Lethrinidae), Lethrinus harak and Lethrinus lentjan. These species were selected because they share similar life-history traits and geographic distributions, but differ in their habitat preferences. Specimens were collected from within the Coral Triangle as well as other localities across the Indo-Pacific. To investigate phylogeographic patterns and structure a hypervariable …

Fish Assemblages Associated With Natural And Anthropogenically-Modified Habitats In A Marine Embayment: Comparison Of Baited Videos And Opera-House Traps, Corey B. Wakefield, Paul Lewis, Teresa B. Coutts, David V. Fairclough, Timothy J. Langlois

Fisheries Research Articles

Marine embayments and estuaries play an important role in the ecology and life history of many fish species. Cockburn Sound is one of a relative paucity of marine embayments on the west coast of Australia. Its sheltered waters and close proximity to a capital city have resulted in anthropogenic intrusion and extensive seascape modification. This study aimed to compare the sampling efficiencies of baited videos and fish traps in determining the relative abundance and diversity of temperate demersal fish species associated with naturally occurring (seagrass, limestone outcrops and soft sediment) and modified (rockwall and dredge channel) habitats in Cockburn Sound. …

Effect Of Anthraquinone Dyes On The Carbohydrate, Protein And Lipid Content In The Muscle Of Channa Punctatus And Cyprinus Carpio, Rajee Olaganathan, Jamila Patterson

Publications

Channa punctatus and Cyprinus carpio was exposed to sub lethal concentrations viz., 6.15 and 6.60 mg/l of vat blue 4 and vat green 1 respectively for a period of thirty days. The cumulative effect of these two dyes on the total carbohydrate, protein and lipid levels in the muscle of both the fishes were assayed on 7th, 18th and 30th day of exposure. The mean carbohydrate content of C. punctatus (both control and treated fish) collected on 18th and 30th day showed a significant difference (P < 0.01 to 0.04). In the case of control and treated C. carpio the data collected on 30th day showed significant variation (P < 0.04) in the carbohydrate content of the muscle. Student’s ‘t’ test analysis conducted on the protein content of C. punctatus during different occasions registered a significant decrease; in case of lipid content, except between the 1st and 30th day in all other cases the ‘t’ value is not significant. In case of C. carp protein and lipid content were observed to increase during the 7th day and thereafter a marked decrease was recorded on the 18th and 30th day of exposure. When the data was subjected to student’s ‘t’ test, both in protein and lipid, significant difference could not be recorded.

Evaluating The Effects Of Road Crossing Structures On Stream-Associated Amphibians In The Wilson River Watershed, Tillamook State Forest, Oregon, Sara Erin Twitchell

Dissertations and Theses

As replacement and removal of undersized culverts gains momentum as an effective technique for restoring natural stream flows and removing fish passage barriers, it is important to evaluate the benefits of these efforts on the in-stream and adjacent riparian habitat for other species of potential concern. This study compares stream-associated amphibian (SAA) occurrence in streams adjacent to different road crossing structures on unpaved forest roads in the Wilson River watershed located within the Tillamook State Forest, Oregon. Surveys were conducted at road crossing structures for three taxa of SAA; Pacific giant salamander (Dicamptodon tenebrosus), coastal tailed frog (Ascaphus truei), and …

Assessment Of A Rotenone Application Event At Mormon Island West Lake In Central Nebraska, Keith D. Koupal, Brian C. Peterson, Casey W. Schoenebeck

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Fisheries managers applied rotenone to Mormon Island West in August of 2010 to renovate a fish community that was hypothesized to be unbalanced (i.e., dominated with gizzard shad and common carp) based on standardized survey results. We estimated species-specific biomass following the lake renovation to provide a baseline biomass estimate for a sand pit lake and to evaluate the effectiveness of standardized sampling gears. Gizzard shad (Dorosoma cepedianum) were abundant in all sampling gears, but mostly stock-size (>175 mm total length) and larger individuals were caught in gill and trap nets and sub-stock (≤175 mm total length) …

Fisheries Research Report No. 242 - Biology, Stock Status And Management Summaries For Selected Fish Species In South-Western Australia, Claire B. Smallwood

Fisheries Research Reports

ObjectiveMany people are interested in fishes, but often it can be difficult to access reliable information on the biology, status and management of a particular fish species. Although there is a long history of world class fisheries research and management in Australia, the full details are generally only available in a fragmented manner in various scientific journals, books and reports. In some cases, these sources of information can be difficult to find and, even for fisheries researchers and managers, who usually have access to scientific journals, certain types of information such as unpublished reports or student theses, can be hard …

Decadal Variation In Egg Abundance Of A Mesopelagic Fish, Maurolicus Japonicus, In The Japan Sea During 1981-2005, Tadanori Fujino, Tsuneo Goto, Tsuyoshi Shimura, Hiroki Yasuma, Yongjun Tian, Hideaki Kidokoro, Shinya Masuda, Kazushi Miyashita

Journal of Marine Science and Technology–Taiwan

Egg abundance of Maurolicus japonicus, a dominant mesopelagic fish in the Japan Sea, was analyzed during 1981-2005 as an index of the spawning-adult abundance. There was a major change in egg abundance around 1988/1989, with negative anomalies occurring during 1981-1988 and positive anomalies occurring from l989. At about the same time (1986/1987), the Tsushima Current shifted from cold to warm conditions. Environmental indices were found to be positively correlated with egg abundance two years later. Our results suggest that the abundance of M. japonicus is affected by climatic regime shifts, and that it could be used as an indicator species.

Purification And Characterization Of Acidic Protease From Aspergillus Oryzae Bcrc 30118, Li-Jung Yin, Ya-Hui Chou, Shann-Tzong Jiang

Journal of Marine Science and Technology–Taiwan

The acidic protease was purified from 4-day cultivation of Aspergillus oryzae BCRC 30118 by DEAE Sephacel and Sephacryl S-200 HR chromatographs. The specific activity, yield and purification fold were 117.62 kU/mg, 15.1% and 6.6, respectively. The molecular weight (M) was 41.0 kDa, while the optimal pH and temperature were 3.0 and 60°C, respectively. It was stable at pH 3.0-6.0 and 4-35°C. However, it was inhibited by Fe2+, Hg2+, Fe3+ and pepstatin A, and slightly by leupeptin and TPCK. According to substrate specificity and inhibitor study, it was a cysteine protease with activation energy of 37.5 kcal/mol. Its Km, Vmax, Kcat …

Behavioural Salinity Preferences Of Juvenile Green Sturgeon Acipenser Medirostris Acclimated To Fresh Water And Full-Strength Salt Water, J. B. Poletto, D. E. Cocherell, A. P. Klimley, J. J. Cech Jr., N. A. Fangue

School of Natural Resources: Faculty Publications

To quantify the salinity preference of juvenile green sturgeon Acipenser medirostris, two groups of A. medirostris [140 days post hatch (dph); total length (L_T) 38.0–52.5 cm] were acclimated to either near fresh water (mean ± S.E. salinity = 3.2 ± 0.6) or full-strength salt water (34.1 ± 1.2) over 8 weeks. Following acclimation, the two groups were divided into experimental and control groups, where experimental A. medirostris from both freshwater and saltwater acclimations were individually introduced (200–220 dph) into a rectangular salinity-preference flume (maximum salinity gradient: 5–33). Control A. medirostris were presented with only their acclimation …