Aquaculture and Fisheries Commons^™

A Method To Detect Discontinuities In Census Data, Chris Barichievy, David G. Angeler, Tarsha Eason, Ahjond S. Garmestani, Kirsty L. Nash, Craig A. Stow, Shana Sundstrom, Craig R. Allen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The distribution of pattern across scales has predictive power in the analysis of complex systems. Discontinuity approaches remain a fruitful avenue of research in the quest for quantitative measures of resilience because discontinuity analysis provides an objective means of identifying scales in complex systems and facilitates delineation of hierarchical patterns in processes, structure, and resources. However, current discontinuity methods have been considered too subjective, too complicated and opaque, or have become computationally obsolete; given the ubiquity of discontinuities in ecological and other complex systems, a simple and transparent method for detection is needed. In this study, we present a method …

Effects Of Large-Scale Wetland Loss On Network Connectivity Of The Rainwater Basin, Nebraska, Bram H. F. Verheijen, Dana M. Varner, David A. Haukos

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Context The Rainwater Basin region in south-central Nebraska supports a complex network of spatiallyisolated wetlands that harbor diverse floral and faunal communities. Since European settlement, many wetlands have been lost from the network, which has increased distances among remaining wetlands. As a result, populations of wildlife species with limited dispersal capabilities may have become isolated and face greater local extinction risks.

Objectives We compared the pre-European settlement and current extent of the Rainwater Basin network to assess the effects of wetland losses on network connectivity for a range of maximum dispersal distances.

Methods We constructed network models for a range …

Synchrony - An Emergent Property Of Recreational Fisheries, Mark A. Kaemingk, Christopher J. Chizinski, Keith L. Hurley, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

No abstract provided.

Bipartite Networks Improve Understanding Of Effects Of Waterbody Size And Angling Method On Angler–Fish Interactions, Christopher J . Chizinski, Dustin R. Martin, Daizaburo Shizuka, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Networks used to study interactions could provide insights to fisheries. We compiled data from 27 297 interviews of anglers across waterbodies that ranged in size from 1 to 12 113 ha. Catch rates of fish species among anglers grouped by species targeted generally differed between angling methods (bank or boat). We constructed angler–catch bipartite networks (angling method specific) between anglers and fish and measured several network metrics. There was considerable variation in networks among waterbodies, with multiple metrics influenced by waterbody size. Number of species-targeting angler groups and number of fish species caught increased with increasing waterbody size. Mean number …

Variation In Angler Distribution And Catch Rates Of Stocked Rainbow Trout In A Small Reservoir, Brian S. Harmon, Dustin R. Martin, Christopher J . Chizinski, K. L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

We investigated the spatial and temporal relationship of catch rates and angler party location for two days following a publicly announced put-and-take stocking of rainbow trout (Oncorhynchus mykiss). Catch rates declined with time since stocking and distance from stocking. We hypothesized that opportunity for high catch rates would cause anglers to fish near the stocking location and disperse with time, however distance between angler parties and stocking was highly variable at any given time. Spatially explicit differences in catch rates can affect fishing quality. Further research could investigate the variation between angler distribution and fish distribution within a …

Population Characteristics Of Shovelnose Sturgeon During Low- And High-Water Conditions In The Lower Platte River, Nebraska, Jeremy J. Hammen, Martin J. Hamel, Matthew L. Rugg, Edward J. Peters, Mark A. Pegg

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Cycles of low- and high-water periods (i.e., years) in river systems are natural occurrences, but understanding how cyclical climatological patterns affect fishes, especially long-lived species, is unclear. We assessed Shovelnose Sturgeon population dynamics between a period of low- (2001-2004) and high- (2009-2012) water years in the lower Platte River, Nebraska. Low-flow periods in the lower Platte River can cause disconnection(s) between upstream and downstream reaches resulting in isolated pools and elevated water temperatures leading to stressful situations for aquatic life and possible mortality. Our data show no measurable differences between key population indices between flow condition periods which is consistent …

Resilience Concepts In Psychiatry Demonstrated With Bipolar Disorder, David G. Angeler, Craig R. Allen, Maj-Liz Persson

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Background: The term resilience describes stress–response patterns of subjects across scientific disciplines. In ecology, advances have been made to clearly distinguish resilience definitions based on underlying mechanistic assumptions. Engineering resilience (rebound) is used for describing the ability of subjects to recover from adverse conditions (disturbances), and is the rate of recovery. In contrast, the ecological resilience definition considers a systemic change: when complex systems (including humans) respond to disturbances by reorganizing into a new regime (stable state) where structural and functional aspects have fundamentally changed relative to the prior regime. In this context, resilience is an emergent property of complex …

Our Changing Climate, David R. Easterling, David W. Fahey, Katherine Hayhoe, Sarah Doherty, James P. Kossin, William V. Sweet, Russell S. Vose, Michael F. Wehner, Donald J. Wuebbels

National Oceanographic and Atmospheric Administration: Technical Reports and Related Materials

This chapter is based on the Climate Science Special Report (CSSR), which is Volume I of the Fourth National Climate Assessment (available at science2017.globalchange.gov). The Key Messages and the majority of the content represent the highlights of CSSR, updated with recent references relevant to these topics. The interested reader is referred to the relevant chapter(s) in CSSR for more detail on each of the Key Messages that follow.

Impacts On Salmonid Rearing Performance With Use Of Dietary Bioprocessed Plant-Based Protein And Water Velocity, Jill Voorhees

Electronic Theses and Dissertations

The inclusion of bioprocessed soybean (Glycine max) meal was evaluated in five experiments using either Rainbow Trout (Oncorhynchus mykiss) or Brown Trout (Salmo trutta). In the first experiment, adult Erwin x Arlee strain Rainbow Trout were fed diets formulated so that bioprocessed soybean meal (BSM) replaced 0, 60, or 80% of the dietary fishmeal. There were no significant differences in gain, percent gain, feed conversion ratio, specific growth rate, intestinal morphology, relative fin lengths, or organosomatic indices. In the second experiment, juvenile Plymouth strain Brown Trout were fed diets formulated so that BSM replaced 0, 60, 80, or 100% of …

Predictors Of Fish Assemblage Structure And Dynamics In Atlantic Coastal Plain Streams, Rebecca Scott

College of Graduate Studies: Theses & Dissertations

Effective management of freshwater fishes requires a mechanistic understanding of the drivers of assemblage composition; in other words, what determines who is where and when. Stream fish assemblages are potentially influenced by environmental factors that act on multiple spatiotemporal scales, but the relative influence of these drivers may vary between geophysically distinct regions. This study sought to determine the patterns and drivers of fish taxonomic and functional assemblage composition in the coastal plain, a region possessing unique hydrologies, faunas, and physiochemical conditions. I addressed this goal using two complementary chapters, both of which utilized environmental and biotic data collected from …

Description Of A New Sound Produced By Nassau Grouper At Spawning Aggregation Sites, Timothy J. Rowell, Michelle T. Schärer, Richard S. Appeldoorn

Gulf and Caribbean Research

This study identified a new sound produced by Nassau Grouper in association with, although potentially not exclusive to, an agonistic interaction at a spawning aggregation. We have also provided a behavioral and acoustic description for identification of this sound in future studies. The discovery of a third type of sound produced by Nassau Grouper further highlights the importance of acoustic communication coupled with visual displays in fishes. Furthermore, identification of a new sound increases the ability to document the presence of this endangered species at spawning sites. Future efforts may reveal that the sound is produced within additional behavioral contexts …

A Dynamic Ocean Management Tool To Reduce Bycatch And Support Sustainable Fisheries, Elliot L. Hazen, Kylie L. Scales, Sara M. Maxwell, Dana K. Briscoe, Heather Welch, Steven J. Bograd, Helen Bailey, Scott R. Benson, Tomo Eguchi, Heidi Dewar

Biological Sciences Faculty Publications

Seafood is anessential sourceofprotein formore than3billionpeopleworldwide, yet bycatchof threatened species in capture fisheries remains a major impediment to fisheries sustainability. Management measures designed to reduce bycatch often result in significant economic losses and even fisheries closures. Static spatial management approaches can also be rendered ineffective by environmental variability and climate change, as productive habitats shift and introduce new interactions between human activities and protected species. We introduce a new multispecies and dynamic approach that uses daily satellite data to track ocean features and aligns scales of management, species movement, and fisheries. To accomplish this, we create species distribution models for …

Forensic Markers Of Lampricide Toxicity In Oncorhynchsus Mykiss, Chris White

Theses and Dissertations (Comprehensive)

The lampricide 3-trifluoromethyl-4-nitrophenol (TFM) has been used for decades to control invasive sea lamprey (Petromyzon marinus) populations in the Great Lakes, normally with little harm to other fish populations. However, due to the nature of lampricide treatments and the chemical properties of TFM, adverse effects to non-target fishes and non-target mortality occasionally occur. However, investigations of non-target mortality can be complex, particularly if fish deaths are not noticed immediately, due to decomposition of the carcasses. The objectives of this thesis were to expose rainbow trout (Oncorhynchsus mykiss) to TFM in order to: (i) identify forensic markers …

Parasites Of The Spotted Sucker, Minytrema Melanops (Cypriniformes: Catostomidae) From Arkansas And Oklahoma, Chris T. Mcallister, Donald G. Cloutman, Anindo Choudhury, Tomas Scholz, Stanley E. Trauth, Thomas J. Fayton, Henry W. Robison

Journal of the Arkansas Academy of Science

During October 2015, March and April 2016 and again between March and April 2017, 15 Spotted Sucker (Minytrema melanops) were collected from sites in the Ouachita (n = 5), Red (n = 1), and St. Francis (n = 5) river drainages, Arkansas, and the Arkansas River drainage, Oklahoma (n = 4), and examined for protozoan and metazoan parasites. Found were Calyptospora sp., Myxobolus sp., Pseudomurraytrema alabarrum, Biacetabulum banghami, Penarchigetes oklensis, and Acanthocephalus sp. New host and distributional records are documented for these parasites.

Additional Records Of Acanthocephalan Parasites From Arkansas Fishes, With New Records From Missouri Fishes, Chris T. Mcallister, Michael A. Barger, Henry W. Robison

Journal of the Arkansas Academy of Science

Over the last decade, our research consortium has provided information on acanthocephalan parasites of Arkansas vertebrates, including records from some of the state’s fishes. Here, we continue to provide data on new geographic and new host records of acanthocephalans from Arkansas fishes. In addition, for the first time, we report records of acanthocephalans for some Missouri fishes. We document 2 new state records as well as 10 new host records for some fish acanthocephalans.

The Spatial Context Of “Winning” In Mpa Network Design: Location Matters, Andrew S. Kough, Claire B. Paris, Mark J. Butler Iv

Biological Sciences Faculty Publications

(First paragraph) Chollett et al. (2017) make the case that a local network of marine protected areas (MPAs) enhances fisheries for Caribbean spiny lobster (Panulirus argus) off the coast of Honduras. However, their simulation focused on one ecoregion where self-recruitment is predicted to be among the highest in the Caribbean (Cowen, Paris, & Srinivasan, 2006). The shallow banks and scattered cays of the Honduran-Nicaraguan Rise, separating the Cayman and Colombian basins, create an obstacle to the powerful southern Caribbean jet (Richardson, 2005), fostering an ideal location for topographically steered eddies and larval retention. Local management,whether based on traditional …

The Microbiome Of The Gastrointestinal Tract Of A Range-Shifting Marine Herbivorous Fish, Jacquelyn Jones, Joseph D Dibattista, Michael Stat, Michael Bunce, Mary C Boyce, David V Fairclough, Michael J Travers, Megan J. Huggett

Research outputs 2014 to 2021

Globally, marine species' distributions are being modified due to rising ocean temperatures. Increasing evidence suggests a circum-global pattern of poleward extensions in the distributions of many tropical herbivorous species, including the ecologically important rabbitfish

Intertidal Habitat Utilization By Endangered Green Sturgeon (Acipenser Medirostris), Willapa Bay, Washington, Luke Stilwater

All Master's Theses

This study looks at a portion of the designated critical habitat for the threatened southern distinct population segment of green sturgeon (Acipenser medirostris) in Willapa Bay, Washington. Willapa Bay is an intermediate size (258.7mi2) estuary on the southwest coast of Washington State, approximately 30 miles north from the mouth of the Columbia River. Recent studies completed by the National Marine Fisheries Service have shown that significant aggregations of green sturgeon in Willapa Bay occur during the late summer months, and foraging activity for burrowing ghost shrimp (Neotrypaea californiensis) is evidenced by small round feeding pits (30-60 cm diameter) in the …

Evaluating Elasmobranch Bycatch And Shark Depredation In The Georgia Shrimp Fishery, Matthew M. Scanlon

College of Graduate Studies: Theses & Dissertations

The Georgia shrimp fishery has seen a dramatic decrease in profit and productivity since the 1980’s due to a number of economic factors. Additional, yet undocumented, pressures on this fishery include interactions between foraging sharks with trawl gear. Fishermen report that sharks frequently bite nets in an attempt to prey on netted fish, resulting in large holes in the gear. Further elasmobranch interactions with trawl gear occur as bycatch; shrimp trawls represent nearly 100% of elasmobranch commercial bycatch in Georgia state waters, the species composition of which is largely unstudied. Shark interactions with nets were detailed through fishery-dependent observations on …

River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2018, Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Gerry Pinto, Gretchen Bielmyer-Fraser, Nisse Goldberg, Anthony Ouellette, An-Phong Le, Radha Pyati, Charles Closmann, Brian P. Zoellner

State of the River Report

No abstract provided.

A Chronology Of Diet And Habitat Use In The Florida Manatee (Trichechus Manatus Latirostris): Insights From Stable Isotope Analysis, Malia Smith

Williams Honors College, Honors Research Projects

The Florida Manatee (Trichechus manatus latirostris) is a threatened species that primarily feeds on marine and estuarine seagrasses. Over the past several years, the seagrass coverage in the Indian River Lagoon has varied due to human influence and algal blooms. This led to an unusual number of manatees dying and potentially, to remaining manatees shifting their diets. It can be difficult to decipher why or how diets shift, however, creating a timeline using stable isotopes can help address this challenge. Red blood cells from live Florida Manatees were analyzed for stable carbon, nitrogen, and sulfur isotope ratios. All …

Restoration Of Mauri (Life-Force) To Okahu Bay: Investigation Of The Cultural, Social, And Environmental Restoration, Emily Freilich

Pomona Senior Theses

This thesis investigated the restoration of mauri (life-force) to Ōkahu Bay, Auckland New Zealand. Ōkahu Bay is part of the land and waters of Ngāti Whātua Ōrākei, a Māori hapū (sub-tribe). Ngāti Whātua Ōrākei has been driving the restoration, restoring Ōkahu Bay based on their worldview, visions, and concerns. This vision and control of the restoration process allows them to bring in the hapū in sustainable engagement and have the long-term vision and commitment necessary for self-determination. However, while there has been progress with projects and improved decision-making authority, hapū members are still not seeing their whānau (family) swimming in …

Diversity And Phylogenetic Relationships Of European Species Of Crepidostomum Braun, 1900 (Trematoda: Allocreadiidae) Based On Rdna, With Special Reference To Crepidostomum Oschmarini Zhokhov & Pugacheva, 1998, Romualda Petkevičiūtė, Virmantas Stunžėnas, Alexander E. Zhokhov, Larisa G. Poddubnaya, Gražina Stanevičiūtė

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Background

Within the genus Crepidostomum Braun, 1900, identification of species and taxonomic decisions made only on the basis of adult morphology have resulted in great problems associated with evaluating actual diversity and validity of species. Life cycle data, while equal in importance to adult characters, are scarce, controversial or incomplete for most Crepidostomum spp. In this study, rDNA sequences generated from adult and larval Crepidostomum spp. and some other allocreadiid species were analyzed to reveal the diversity and phylogenetic relationships of the species and their host range. Detailed morphological description based on light microscopy, SEM tegumental surface topography and genetic …

Spatial Variation In Fishery Exploitation Of Mature Female Blue Crabs (C. Sapidus) In Chesapeake Bay, Corey Travis Corrick

UNF Graduate Theses and Dissertations

From 2008 to 2012, the total U.S. commercial landings of blue crabs (Callinectes sapidus Rathbun, 1896) averaged over 173 million lbs. Chesapeake Bay and its tributaries are important contributors to this fishery, providing greater than 30% of national commercial landings annually. In Chesapeake Bay, C. sapidus exhibits a complex life cycle in which mated females migrate to the saline waters of the Bay mouth to spawn. During migration, females can traverse multiple management jurisdictions, complicating effective management of this important fishery. Sustained declines in harvest have led to management strategies focused on protecting the female spawning stock in an …

Evaluation And Demographic Response Of The Shovelnose Sturgeon Commercial Caviar Fishery In The Wabash River, Jessica L. Thornton

Masters Theses

Shovelnose sturgeon (Scaphirhynchus platorynchus Rafinesque) are considered one of the last commercially viable options for sturgeon roe harvest. Due to the collapse of several marine sturgeon fisheries and the Similarity of Appearances provision which protect shovelnose sturgeon in only a part of their range, the caviar fishery in the Wabash River remains an important point of supply for this lucrative natural resource. In this thesis, I presented an evaluation of the shovelnose sturgeon commercial caviar fishery in the Wabash River. More specifically, I described the demographic response of this population to continued exploitation over a 10-year period. Additionally, I …

Bigheaded Carp Reproduction In Large River Tributaries With Evaluation Of Sampling Gear Performance, Daniel R. Roth

Masters Theses

No abstract provided.

Status Reports Of The Fisheries And Aquatic Resources Of Western Australia 2016/17. State Of The Fisheries, Daniel J. Gaughan, K. Santoro

Status Reports of the Fisheries and Aquatic Resources

The Status Reports of the Fisheries and Aquatic Resources of Western Australia (SRFAR) provide an annual update on the state of the fish stocks and other aquatic resources of Western Australia (WA). These reports outline the most recent assessments of the cumulative risk status for each of the aquatic resources (assets) within WA’s six Bioregions using an Ecosystem Based Fisheries Management (EBFM) approach.

Rangewide Tidewater Goby Occupancy Survey Using Environmental Dna, Michael Sutter

Cal Poly Humboldt theses and projects

Rangewide monitoring of fish species is critical for determining status and trends in abundance and distribution; however, implementations of large-scale distribution surveys have generally been constrained by time and cost. This study uses environmental DNA (eDNA) to monitor the presence or absence of two endangered tidewater goby species, the northern tidewater goby (Eucyclogobius newberryi) and the southern tidewater goby (Eucyclogobius kristinae), across their combined geographic range that encompasses the entire California coast (1,350 km).A multi-scale occupancy model designed specifically for eDNA methods was used to account for imperfect detection and to estimate true site occupancy. A …

Characterizing Habitat Preference In Three Nearshore Reef-Associated Fishes Through Collaborative Research, Public Data, And Open Source Software, Ian D. Kelmartin

Cal Poly Humboldt theses and projects

Black rockfish (Sebastes melanops), canary rockfish (S. pinniger), and lingcod (Ophidion elongatus) are important species in Northern California’s nearshore recreational and commercial fisheries. These species are associated with nearshore rocky reefs and are among a suite of species intended to benefit from the establishment of the marine protected area (MPA) network along the Northern California Coast in 2012.

Many aspects of the North Coast’s nearshore ecosystem remain poorly studied, including the spatial distribution and habitat associations of nearshore fish species. This study used data collected from Cape Mendocino State Marine Reserve (SMR), Ten Mile …

Diversity Of Water Bugs In Gujranwala District, Punjab, Pakistan, Muhammad Shahbaz Chattha, Abu Ul Hassan Faiz, Arshad Javid, Irfan Baboo, Inayat Ullah Malik

Journal of Bioresource Management

Water bugs fall under the order Hemiptera, suborder Heteroptera, which is further divided into two types, i.e., semi-aquatic (Gerromorpha) and true water bugs (Nepomorpha). They play a vital role as biological control agents and also a source of food for fishes, birds and other aquatic organisms. The present work was carried out to ascertain aquatic Hemiptera in different lentic and lotic water bodies of various sizes in Gujranwala district, Pakistan. A total of 10 species belonging to five families were identified. Species include Nepa ruber Linnaeus, Laccotrephes elongatus Montandon, Ranatra filiformis Fabricius (Nepidae), Corixa substriata Uhler, Micronecta proba …