Animal Sciences Commons^™

Aged 539 - Graduate Internship, Braidyn R. Cossa

Agricultural Education: Graduate Internship Reports

This report reflects on the Cal Poly Rodeo Program's alignment with the National Standards for Sport Coaches, showcasing a comprehensive approach to athlete development across multiple critical domains. Emphasizing a well-defined coaching philosophy, the program promotes sportsmanship, ethical behavior, and academic success. Personalized coaching addresses the developmental stages of athletes, ensuring a balance between their academic and athletic roles. The program employs effective teaching methods, clear communication, and constructive feedback to foster a positive environment and build strong coach-athlete relationships based on mutual respect and trust.

The coaches possess deep knowledge of rodeo skills and strategies, utilizing psychological techniques to …

Baseline Characterization Of Semen From Philippine Native Chickens: Banaba, Joloano And Paraoakan, Darcy Pamulaklakin, Carla Alilie Junsay, Consuelo Amor Estrella, Percival Sangel

The Philippine Agricultural Scientist

The study aimed to characterize and establish baseline data on the quantity and quality of fresh avian semen utilizing a sample of Philippine native roosters. Twenty-two heads each were acquired from breeds Banaba, Joloano, and Paraoakan. The baseline data analysis revealed significant variations in semen volume among different genetic groups, with Banaba displaying the highest volume, followed by Joloano and Paraoakan. Banaba also exhibited the highest semen pH value of 7.27 when compared to the other two genetic groups (P < 0.05). Across various genetic groups of native chickens, the majority of semen samples demonstrated a thick and creamy consistency and color (42.6%), followed by thin and creamy (32.9%), with a statistical significance of P < 0.05. Furthermore, variations in sperm concentration were observed among genetic groups, with Paraoakan having the highest sperm concentration, followed by Banaba and Joloano (P < 0.05). When the semen from Banaba and Joloano native roosters were extended in Ringer’s solution, it exhibited good motility, with more than 50% of spermatozoa in motion, even after six hours of extension. In contrast, the pooled extended semen from Paraoakan native roosters displayed poor motility, particularly after eight hours of extension (P < 0.05). The study also showed that storage temperatures did not significantly affect all the sperm quality parameters of Banaba and Joloano. However, for Paraoakan, samples stored at low temperatures of 5 – 10ºC had significantly higher percent motile and progressive sperm, and lower percent static sperm than those stored at room temperature (22 – 25ºC) (P < 0.05).

Grazing Annual Pastures – Using Feed On Offer (Foo) As A Guide, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Grazing management in winter and spring in South West Western Australia (SW WA) can manipulate the quality, quantity and composition of pasture. These pasture changes can increase livestock feed efficiency and productivity, reduce insect populations and improve pasture persistence. Seasonal grazing based on feed on offer (FOO) is described here to maximise stocking rate and pasture production.

The Department of Primary Industries and Regional Development recommends using feed measurements and feed budgeting to increase productivity and reduce livestock health risks.

Boosting Winter Pasture Growth, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Applying gibberellic acid or nitrogen fertiliser to pasture in winter can increase dry matter production of grasses and broadleaf weeds and help reduce feed shortages in winter.

Neutrophil To Lymphocyte Ratio (Nlr) In Captive Olive Baboons (Papio Anubis): The Effects Of Age, Sex, Rearing, Stress, And Pregnancy, Sarah J. Neal, Angela M. Achorn, Steven J. Schapiro, William D. Hopkins, Joe H. Simmons

Anthropology Faculty Publications

In apes and humans, neutrophil to lymphocyte ratio (NLR) can be used as a predictive indicator of a variety of clinical conditions, longevity, and physiological stress. In chimpanzees specifically, NLR systematically varies with age, rearing, sex, and premature death, indicating that NLR may be a useful diagnostic tool in assessing primate health. To date, just one very recent study has investigated NLR in old world monkeys and found lower NLR in males and nursery-reared individuals, as well as a negative relationship between NLR and disease outcomes. Given that baboons are increasingly used as research models, we aimed to characterize NLR …

The Early Years Of The Nebraska Ornithologists’ Union: People And Publications, Daniel W. Leger

Nebraska Bird Review

Nebraska once boasted that it had the greatest avian biodiversity of any state. Today, such a claim seems preposterous, but when it was made, back in 1899, it was serious. The antecedents of that claim underlie the objective of this article, namely to describe the early history of the Nebraska Ornithologists’ Union (NOU), its founding members, and its publications, one of which, the Nebraska Bird Review, you are reading today.

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To say that many changes have occurred in ornithology and birding since the NOU started in 1899 would be a severe understatement. Most of these changes have …

Male Song Structure Predicts Offspring Recruitment To The Breeding Population In A Migratory Bird, Rachael A. Disciullo, Anna M. Forsman, Robert R. Fitak, John Hunt, Pirmin Nietlisbach, Charles F. Thompson, Scott K. Sakaluk

Faculty Publications – Biological Sciences

Bird song is a classic example of a sexually selected trait, but much of the work relating individual song components to fitness has not accounted for song typically being composed of multiple, often-correlated components, necessitating a multivariate approach. We explored the role of sexual selection in shaping the complex male song of house wrens (Troglodytes aedon) by simultaneously relating its multiple components to fitness using multivariate selection analysis, which is widely used in insect and anuran studies but not in birds. The analysis revealed significant variation in the form and strength of selection acting on song across different …

Listening For Lemurs: Translating Black-And-White Ruffed Lemur (Varecia Variegata) Vocalizations Into Conservation Insights Through Acoustic Monitoring, Carly H. Batist

Dissertations, Theses, and Capstone Projects

The field of bioacoustic monitoring has undergone a significant evolution in recent years, driven by technological innovations that have revolutionized how researchers study animal vocalizations. Traditionally, bioacoustics was rooted in active acoustic monitoring (AAM), involving human observers using recorders in the field to study animal sounds and understand species' vocal communication. However, the emergence of passive acoustic monitoring (PAM) has introduced a new complementary approach, utilizing specialized recorders placed in ecosystems to autonomously capture sounds at wide spatial and temporal scales. My dissertation adopts a translational approach to bioacoustic monitoring, integrating both AAM and PAM techniques to study and survey …

Dynamic Responses Of Blood Metabolites To Nutrient Depletion And Repletion In Broiler Chicken Nutrition, A.J. Cowieson, C. A. Phillips, Garrett J. Mullenix, E. S. Greene, E. Papadopoulou, Sami Dridi

Poultry Science Faculty Publications and Presentations

A total of 720 male Cobb 500 broiler chicks were used in a 5 treatment and 8 replicate experiment to explore dynamic changes in blood metabolites in response to short-term nutrient depletion and repletion. Day old chicks were offered a corn and soybean meal-based common starter diet from d1 to 14 that was formulated to meet all nutrient requirements of the birds. From d15 to 17, the experimental diets were offered, before returning all groups to a common diet from d18 to 20, at which point the experiment was terminated. A total of 5 experimental diets were designed. A …

Church2024_Development Of A Rhizobium Seed Coating...Data, Bridget M. Church, Brad Geary, Curtis L. Drake, Joel Griffitts, Kate Ruebelmann, Shannon V. Nelson, Matthew D. Madsen

ScholarsArchive Data

This file contains the data description for the “Church2024_Development of a Rhizobium Seed Coating…” Supplementary File.

The excel file contains six worksheets: 1) Exceed Study Data, 2) Exceed Study Tiss TotN%, 3) Inoc Study data, 4) Inoc Study Tiss TotN%, 5) Seed Coat study data, Seed Coat study Tiss TotN%.

Dietary Fiber-Derived Butyrate Alleviates Piglet Weaning Stress By Modulating The Tlr4/Myd88/Nf-Κb Pathway, Weikang Huangfu, Jixiang Ma, Yan Zhang, Mengki Liu, Boshuai Liu, Jiangchao Zhao, Zhichang Wang, Jinghua Shi

Animal Science Faculty Publications and Presentations

During weaning, piglets are susceptible to intestinal inflammation and impairment in barrier function. Dietary fiber (DF) plays an active role in alleviating weaning stress in piglets. However, the effects of different sources of dietary fiber on the performance of weaned piglets are inconsistent, and the mechanisms through which they affect intestinal health need to be explored. Therefore, in this study, sixty weaned piglets were randomly divided into three treatment groups: basal diet (control, CON), beet pulp (BP), and alfalfa meal (AM) according to the feed formulation for a 28-day trial. The results showed that both AM and BP groups significantly …

Effect Of Sex On The Accumulation Of Hepatic Mercury In Mallards Wintering In Louisiana, Latorya E. Mason

Master's Theses

The increase in mercury production through anthropogenic activities has led to a global crisis of mercury pollution that poses a significant threat to the health of both humans and wildlife. Aquatic ecosystems are especially at risk due to the creation of methylmercury, a toxic form of mercury, by sulfate-reducing bacteria in anoxic sediments and soils. Methylmercury enters the food chain where it bioaccumulates in individual organisms and then biomagnified with increasing trophic level. Aquatic birds are useful bioindicators of many pollutants, including mercury, due to their abundance and position in the food chain. Previous studies have primarily focused on mercury …

Beyond The Human: Crossovers For An Onto-Epistemological Bifurcation, Ester Toribio-Roura

Articles

Building upon recent studies in new materialisms and feminist critical posthumanism with a focus on human and more-than-human relationships, this paper examines how the posthuman paradigm, by postulating the queering of identit(ies) via entanglement with the more-than-human (including technology), and by offering a critical examination of diverse modes of existence within a broader ecological context, can foster more inclusive and ethically sound ways of being in the world. Although posthumanism encompasses a wide range of perspectives and theories, including transhumanism, at its core, it challenges traditional notions of humanism, blurring the boundaries between what is human and what is more-than-human, …

Operation Shark: Addressing The Negative Portrayal Of Sharks In Media, Michael R. O'Shea

Masters Theses

Sharks are some of the most well adapted and effective animals in the animal kingdom. Unfortunately, they are also some of the most feared. For many people the word shark evokes images of vicious attacks like those seen in movies such as Jaws. Sharks have also been negatively portrayed in the media. This negative portrayal of sharks has led to misconceptions about sharks that have damaged their populations. Efforts have been made to raise awareness and fight common misconceptions of sharks. However, many people still hold on to the incorrect ideas they have about sharks. This thesis will examine the …

Condition Scoring Of Sheep, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Condition scoring sheep is an easy and accurate method of estimating the condition or 'nutritional wellbeing' of your sheep flock. It requires an assessment of the amount of muscle and fat covering the backbone and the short ribs of each sheep. This gives a picture of the sheep’s store of energy. It is the best method for monitoring pregnant and lactating ewes but is also useful for monitoring the growth of weaners.

Revealing Microbial Community Composition And Disinfection Efficacy Evaluation In Wholesale Pork Markets Through 16s Rdna Sequencing, Miao He, Lingyan Ma, Wentao Lv, Yingping Xiao, Hua Yang, Xiofan Wang, Jiangchao Zhao, Hangzhen Lan, Wen Wang, Xingning Xiao

Animal Science Faculty Publications and Presentations

This study has employed 16S rDNA analysis to elucidate the characteristics of the microbial community in the surroundings, facilities, and meat samples collected from a pork wholesale market with the aim of revealing bacterial contamination. In addition, the efficacy of sodium hypochlorite disinfectant was assessed by comparing the bacterial communities in the viable samples before and after disinfection. The bacterial abundances in meat, chopping boards, and knives were positively correlated (r > 0.95, p <  .05), suggesting potential cross-contamination risks during market transactions. The species richness indices for the external transport vehicles, pork hooks, and floors were significantly different from those of the samples taken after decontamination (p <  .05). Linear discriminant analysis Effect Size (LEfSe) analyses showed that Firmicutes, Proteobacteria, and Chloroflexi were significantly more abundant in the transaction period, whereas Bacteroidetes levels decreased compared to the clean-up period. NaClO disinfection …

Reassignment Of Some Caryospora Species (Apicomplexa: Eimeriidae) To Eumonospora (Apicomplexa: Sarcocystidae) And A Summary, Donald W. Duszynski

MANTER: Journal of Parasite Biodiversity

This review was crafted to clear up some of the current confusion regarding the correct taxonomic placement of those apicomplexan coccidians that produce unique monosporocystic octosporozoic (1 sporocyst with 8 sporozoites) oocysts during the sexual phase of their life history in vertebrate hosts. Currently, such oocysts have been placed in 1 of 4 genera, Avispora, Caryospora, Karyospora, or Eumonospora, 2 of which are no longer accepted or useful (Avispora and Karyospora). My review suggests that to present (2023) there are 62 valid Caryospora and 26 valid Eumonospora species. Caryospora species are recorded from a bird …

A Potential Of Watercress Nasturtium Officinale Bioactive Compounds In Inhibiting Infectious Myonecrosis Virus (Imnv) By Targeting Rna-Dependent Rna Polymerase (Rdrp) Virus From Several Countries: In Silico Approach, Qurrota A’Yunin, Fatchiyah Fatchiyah, Maftuch Maftuch, Feri Eko Hermanto, Muhammad Hermawan Widyananda, Narendra Santika Hartana, Muhaimin Rifa’I, Yoga Dwi Jatmiko

Karbala International Journal of Modern Science

Infectious myonecrosis virus (IMNV) disease causes mass mortality and decreased shrimp production. The RdRp region projects to the interior, where it may function in transcription. The focus of this study was to determine the effect of amino acid polymorphisms from several countries on the structure of RdRp and identify the potential of watercress in inhibiting IMNV by targeting the RdRp protein of IMNV through an in silico approach. The results showed that the structure of the IMNV RdRp protein from Indonesia was similar to Mexico, and the protein structure from India_QDN was identical to India_QIL. Ligand binding affinity values showed …

A Model Of Oocyte Population Dynamics For Fish Oogenesis, Louis Fostier, Frédérique Clément, Romain Yvinec, Violette Thermes

Biology and Medicine Through Mathematics Conference

No abstract provided.

A New Case Of Pedipalp Regeneration In Scorpio Kruglovi Birula, 1910 (Scorpiones: Scorpionidae), Ersen A. Yağmur, Mehmet S. Kılıç, Eyüp Güneş

Euscorpius

A new case of pedipalp regeneration is described and illustrated in a subadult female of Scorpio kruglovi Birula, 1910. A small, regenerated part of chela is observed on the anterior aspect of a normally developed right patella. This is the second published case of pedipalp regeneration.

Unraveling The Role Of Lipid Droplets And Perilipin 2 In Bovine Luteal Cells, Michele R. Plewes, Heather A. Talbott, Micah B. Schott, Jennifer R. Wood, Andrea S. Cupp, John S. Davis

Department of Animal Science: Faculty Publications

Steroidogenic tissues contain cytosolic lipid droplets that are important for steroidogenesis. Perilipin 2 (PLIN2), a structural coat protein located on the surface of lipid droplets in mammalian cells, plays a crucial role in regulating lipid droplet formation and contributing to various cellular processes such as lipid storage and energy homeostasis. Herein, we examine the role that PLIN2 plays in regulating progesterone synthesis in the bovine corpus luteum. Utilizing gene array databases and Western blotting, we have delineated the expression pattern of PLIN2 throughout the follicular to luteal transition. Our findings reveal the presence of PLIN2 in both ovarian follicular and …

Impacts Of Hematodinium Infection In A Seasonal Population Model Of The Chesapeake Bay Blue Crab, Gwendolyn R. Sargent, Romuald Lipcius, Leah Shaw, Junping Shi, Jeffrey D. Shields

Biology and Medicine Through Mathematics Conference

No abstract provided.

Temporal And Spatial Influences On Fawn Summer Survival In Pronghorn Populations: Management Implications From Noninvasive Monitoring, Cole A. Bleke, Eric M. Gese, Juan J. Villalba, Shane B. Roberts, Susannah S. French

Wildland Resources Student Research

Monitoring vital rates allows managers to estimate trends in growth rates of ungulate populations. However, connecting the influence of nutrition on ungulate demography is challenging. Noninvasive sampling offers a low-cost, low-effort alternative for measuring nutritional indices, allowing for an increased understanding of the mechanistic relationships between environmental factors, nutrition, and specific population vital rates. We examined the temporal influence of intrinsic and extrinsic factors on pronghorn (Antilocapra americana) fawn recruitment. We collected fresh fecal samples from adult female pronghorn in five subpopulations spanning three sampling periods associated with critical maternal life-history stages (late gestation, early lactation, breeding season) …

Hay Inventory And Purchasing Calculator For Horse Owners, Robyn L. Stewart, Brooklyne M. Wassel

Journal of Extension

The Hay Inventory and Purchasing Calculator for Horse Owners is an Excel-based tool for estimating hay needs and expenses for horse owners. Challenges with hay quality and availability can result in higher than expected costs for horse owners as they attempt to purchase enough horse-quality hay to meet their needs. Estimating intake requirements and creating a budget for hay purchasing is key for the effective management and profitability of equine operations. This tool can be used regardless of geographic location and will benefit a diverse audience including Extension educators, equine business owners, and horse owners.

Perceived Benefits And Barriers To Livestock Mortality Composting, Rachel Wieme, Lynne Carpenter-Boggs

Journal of Extension

We conducted webinars in 2020 about livestock mortality composting (LMC). Forty-five attendees completed a survey to evaluate the webinar and help define future educational needs. Major barriers to LMC were lack of experience, public and neighbor perceptions, and environmental management. Most respondents indicated convenience, cost, biosafety, use of product, and environmental management as benefits. An unexpected emotional theme indicated that LMC also supports the “circle of life” and “respect for the animal.” We propose that this theme may be a uniting message to improve public and producer perception of LMC, increase use of LMC, and improve public-producer relationships overall.

Maturation Of An Off-Channel Habitat Concept To Conserve Native Fishes In The Lower Colorado River, Paul C. Marsh, Thomas E. Dowling, Thomas F. Turner, Megan J. Osborne, Brian R. Kesner

Monographs of the Western North American Naturalist

Two endemic, “large river” fishes of the Colorado River basin of western North America, bonytail Gila elegans and razorback sucker Xyrauchen texanus, are among several critically endangered species in the system. Wild populations of bonytail are gone, and there are no self-sustaining populations of razorback sucker anywhere; reproduction occurs but recruitment does not. Both species have been under intensive management in the Lower Colorado River since the 1980s. Today, with the single exception of Lake Mead, remaining populations are composed entirely of repatriated individuals that depend on stocking for their continued existence. In 2003, a conceptual off-channel habitat (OCH) …

On-Farm Hog Processing Demonstration For Teenage Exhibitors: Blending Academic, Laboratory, And Farm-Based Learning, Katherine A. Wells, Chris L. Bruynis, Lyda G. Garcia

Journal of Extension

COVID-19 challenges induced a U.S. meatpacking industry bottleneck. [University] Extension identified the need and responded by creating a three-step hands-on training for teenage junior fair exhibitors. [University] Extension Meat Scientist and graduate students assisted in demonstrating an on-farm hog harvest and processing event in collaboration with a local Extension office for 4-H and FFA teenagers. To add a practical perspective, a local hog-producing and harvesting family was asked to assist with the event. An online post-survey reflected 90-100% gains in five educational areas and 100% said they would a similar event in the future and recommend it to a friend.

Duck Gut Metagenome Reveals The Microbiome Signatures Linked To Intestinal Regional, Temporal Development, And Rearing Condition, Lingyan Ma, Wentao Liu, Tao Zeng, Wen Wang, Qu Chen, Jiangchao Zhao, Guolong Zhang, Lizhi Lu, Hua Yang, Yingping Xiao

Animal Science Faculty Publications and Presentations

The duck gastrointestinal tract (GIT) harbors an abundance of microorganisms that play an important role in duck health and production. Here, we constructed the first relatively comprehensive duck gut microbial gene catalog (24 million genes) and 4437 metagenome-assembled genomes using 375 GIT metagenomic samples from four different duck breeds across five intestinal segments under two distinct rearing conditions. We further characterized the intestinal region-specific microbial taxonomy and their assigned functions, as well as the temporal development and maturation of the duck gut microbiome. Our metagenomic analysis revealed the similarity within the microbiota of the foregut and hindgut compartments, but distinctive …

Closing The Gap: Methodological Consideration In Predicting Suitable Habitat For Ouachita Fanshell (Cyprogenia Sp Cf Aberti) With Documentation Of Mussel Communities In Small Tributaries In The Ouachita River Watershed, Seth Drake

ATU Theses and Dissertations 2021 - Present

Freshwater mussels are one of the most imperiled taxonomic groups in the world, consequently, much effort is being expended to document the distribution of many mussel species. One tool that can aid in characterizing mussel distributions are species distribution models (SDM). I conducted two studies pertaining to freshwater mussel distributions: (1) utilize Maximum Entropy (MAXENT) modeling to predict potential areas of suitable habitat for the threatened Ouachita Fanshell (Cyprogenia sp cf aberti), and (2) survey small tributaries of the Ouachita River watershed to fill a portion of the information gap surrounding mussel communities in under-surveyed streams. Through changing …

Reproductive Success And Post-Fledging Ecology Of The American Robin (Turdus Migratorius) In Suburban Areas Of The Arkansas River Valley, Brandon Maiersperger

ATU Theses and Dissertations 2021 - Present

Study of the nesting and post-fledging periods is necessary to properly evaluate avian reproductive success. Birds breeding in suburban areas are threatened by a high abundance of predators and limited habitat availability. American Robins (Turdus migratorius) are common birds in suburban areas across North America, but their breeding ecology is understudied. The goals of my study were to: assess robin nest survival and its relationships with nest characteristics, evaluate fledgling survival, movement, and behavior, and determine the fledging sex ratio and sex-based plumage characteristics of fledglings. I found that robin daily nest survival (0.920) was lower than previous …