Animal Sciences Commons^™

Growth Performance And Nutrient Metabolism Of Pasture-Finished Beef Steers And In Vitro Fermentation Characteristics Of Pasture Forages In Continuous Cultures, Cuk Tri Noviandi

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A 2-year grazing study was conducted to evaluate the growth performance, ruminal fermentation, carcass characteristics, and fatty acid compositions in subcutaneous adipose tissue of beef steers grazing tall fescue (Festuca arundinacea Shreb.; TF) pastures without or with N fertilization. Nitrogen fertilization increased crude protein concentration of TF pasture and average daily gain of beef steers. Increase in total volatile fatty acids (VFA) and ammonia-N (NH₃-N) concentrations were detected in steers grazing fertilized TF. In comparison with steers on feedlot, pasture-finished steers had greater proportions of cis-9, trans-11 CLA and C18:3 n-3, …

The Micronutrient Profile Of The Typical American Diet Enhances Colorectal Carcinogenesis, Stephany Del Carmen Perez Monsanto

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The typical Western dietary pattern is characterized by the consumption of energy-dense, nutrient-poor foods and has been linked to increased risk of colorectal cancer (CRC). Our research group previously developed the total Western diet (TWD) that emulates typical human dietary intakes of macro- (carbohydrates, proteins, and fats) and micronutrients (vitamins and minerals) on an energy density basis for rodents. In the present study, we sought to determine the impact of TWD on biomarkers of metabolic syndrome and obesity in comparison to a commercial 45% fat diet used for models of diet-induced obesity (DIO diet) and the standard basal AIN93G diet, …

Colorado River Cutthroat Trout Habitat Resistance And Resilience To Climate Change, Kate H. Olsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Government agencies and private organizations spend large amounts of public money attempting to return ecosystems to a more natural state, which have often been harmed or even destroyed as a result of modern development. Colorado River cutthroat trout, Oncorhyncus clarki pleuriticus, are a subspecies of cutthroat trout. Cutthroat trout live in the Rocky Mountains of the western United States. The population of this particular subspecies has been severely reduced by human actions, and currently only 12% of its historic populations still exist. To improve the condition of cutthroat trout, fisheries professionals and biologists are working to restore natural populations. …

Strategic Approaches To Develop Optimal Feeding Program Of Brown Midrib Corn Silage To Lactating Dairy Cows In The Intermountain West, Michael Shane Holt

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In two lactation studies reported in this dissertation, it was hypothesized that feeding 35% brown midrib corn silage (BMRCS) and 25% alfalfa hay (dry matter basis) would result in increased dry matter intake (DMI) around peak lactation compared with feeding conventional corn silage (CCS), causing longer peak milk production, and that feeding dairy cows in early lactation a 16% crude protein diet with fair quality alfalfa hay (FAH) in BMR-based diets would maintain milk production, reduce urinary N excretion, and improve N efficiency compared to those fed high quality alfalfa hay ( …

Assessing Vehicle-Related Mortality Of Mule Deer In Utah, Daniel D. Olson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Roads are essential in modern societies, but as populations grow and traffic volumes rise, roads will continue to be built and expanded. As a result, the effects that roads have on wildlife will likely intensify, making it imperative that managers understand those effects so mitigation can be directed accordingly. In Utah, considerable areas of mule deer (Odocoileus hemionus) habitat have been bisected by roads. Mule deer are commonly involved in vehicle collisions and there is concern that roads and vehicle traffic are impacting populations. This project was conducted to determine the number and demographic effects of deer-vehicle collisions, …

Evaluation Of Survey Methods And Development Of Species Distribution Models For Kit Foxes In The Great Basin Desert, Stephen J. Dempsey

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Historically, kit foxes (Vulpes macrotis) once occupied the desert and semi-arid regions of southwestern North America, ranging from Idaho to central Mexico. Their range-wide decline has warranted the kit fox to be designated as a state sensitive species in Utah. Once considered the most abundant carnivore in western Utah, the kit fox has been in steep decline over the past decade, creating a demand to determine kit fox presence in the Great Basin desert. Currently there is little consensus on which survey methodology is best for detecting kit fox presence. We tested 4 survey methods (scat deposition, scent …

Vital Rates, Population Trends, And Habitat-Use Patterns Of A Translocated Greater Sage-Grouse Population: Implications For Future Translocations, Orrin V. Duvuvuei

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Greater sage-grouse (Centrocercus urophasianus; sage-grouse) populations have declined range-wide with some local populations exhibiting dramatic decreases. In 2009–2010, radio-marked hens (30 hens in 2009 and 30 hens in 2010) were translocated from Parker Mountain in south-central Utah to augment a rapidly declining population on Anthro Mountain in northeastern Utah. Thirty-two resident female sage-grouse on Anthro Mountain were also radio-collared from 2009–2012.

I compared population vital rates (i.e., nest and brood success, and survival) of resident and translocated hens in Anthro Mountain’s population to those of a translocated population in Strawberry Valley, Utah and the source population. Of these …

Ecology Of Coyotes On The Valles Caldera National Preserve, New Mexico: Implications For Elk Calf Recruitment, Suzanne J. Gifford

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Valles Caldera National Preserve (VCNP) managers were concerned about low elk recruitment observed at the same time as an apparent increase in sightings of coyotes and observations of coyote predation on elk calves. The goal of this study was to describe coyotes’ ecological interactions with elk, particularly coyote diet and movements on the Valle Grande, a large grassland meadow in the southeastern portion of the VCNP.

We examined coyote diet by quantifying undigested remains of food items in coyote scats (feces). The most frequent taxa were rodents (montane voles and pocket gophers), elk (adult and calf), insects (grasshoppers and beetles), …

Winter Ecology Of Waterfowl On The Great Salt Lake, Utah, Josh L. Vest

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I designed a suite of studies in coordination with Utah Division of Wildlife Resources (UDWR) to evaluate waterfowl use of the GSL in winter and ecological aspects associated with GSL use. These studies provided insight into key information gaps previously identified by UDWR regarding management of GSL resources. Population surveys indicated total duck abundance was low when GSL surface elevations were low and wetland resources diminished because of persistent drought in the system. Also, ducks appear to use hypersaline parts of GSL more when freshwater habitats are limited from either drought or ice conditions. Common goldeneye, northern shoveler, and green-winged …

Analysis Of Single Nucleotide Polymorphism Panels For Bovine Dna Identification, Kimberly A. Blanchard

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Single nucleotide polymorphisms (SNPs) have great power in resolving questions of unknown parentage on ranches or dairies where errors could have been made in pedigree record keeping or when such records were simply not kept. Currently a panel of 88 SNPs based on a panel originally created by USDA-MARC is commercially available from the company Fluidigm^®. Our objective was to determine whether or not the number of SNPs could be reduced to form a smaller, more cost-efficient parentage-testing panel. A smaller panel would be beneficial to farmers and researchers alike in the reduction of time spent running and …

Regulation And Expression Of Nanog, Oct4, And Sox2 In The Bovine Blastocyst Following Somatic Cell Nuclear Transfer, Justin Scott Hall

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Animal, Dairy, and Veterinary Sciences Department (ADVS) and the Center for Integrated Biosystems (CIB) at Utah State University are studying various molecular mechanisms involved in the animal cloning process. This study involves the extensive network of people, facilities, equipment, and funding already associated with the CIB and ADVS joint project.

Cloning involves many molecular challenges that for the most part have become roadblocks for the normal development of the fetus. The mechanisms necessary to transform an adult cell into a competent stem cell that can then transform and develop into a healthy organism are poorly understood. Some of these …

Roads And The Reproductive Ecology Of Hesperidanthus Suffrutescens, An Endangered Shrub, Matthew B. Lewis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

We studied the pollination ecology of the endangered Utah desert shrub, shrubby reed-mustard (Hesperidanthus suffrutescens). We also studied the impacts that dust from unpaved roads has on successful reproduction. In addition, we looked at the relationship between the total number of plants, the spacing of plants, and reproduction. We found that shrubby reed-mustard requires pollinators for successful pollination. Pollinators include many small native bees from the genera Andrena, Dialictus, and Halictus. Additionally, we found that reproduction of shrubby reed-mustard is limited, possibly due to scarcity of these bees. We found that dust from the road …

Comparison Of Topographic Surveying Techniques In Streams, Sara G. Bangen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Bonneville Power Administration (BPA) Fish and Wildlife Program (FWP) mitigates impacts, including mortality, from hydroelectric dams in the Columbia River Basin for ESA-listed salmon and steelhead populations and other species of special concern. Given the extensive economic resources invested in mitigation and the incredible diversity of in-stream habitat across the Columbia River basin, questions have arisen about which sampling strategies are most tractable across the entire Columbia River Watershed, but also produce datasets that allow researchers to answer meaningful questions about salmonid populations and trends in habitat. In response to these issues, the NOAA Integrated Status and Effectiveness Monitoring …

Cougar Predation Behavior In North-Central Utah, Dustin L. Mitchell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Today’s ability to apply global positioning systems (GPS) collars to wild animals and track their movements, without inadvertently disrupting their daily routine, is a major benefit to wildlife research. Cougars are carnivorous predators that have been identified as being one of several possible causes for recent mule deer population declines throughout the Western United States. Past cougar predation studies have relied on snow tracking, radio-collar tracking, and modeling techniques to estimate cougar prey use and predation rates. These methods rely heavily on weather conditions, logistical availabilities, and broad assumptions, which have led to a wide range of predation rate estimates. …

Characterization And Potential Utility Of Porcine Trophoblast-Derived Stem-Like Cells, Edison A. Suasnavas

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In mammalian pregnancy, the placenta is a very important organ which helps to establish a healthy pregnancy. Its functions could be described in four points: 1) It allows the fetus to receive gases and nutrients from the mother in a safe way; 2) it lets the fetus get rid of waste through the mother's kidneys; 3) it releases essential pregnancy-related hormones and growth factors that let the uterus hold the fetus; 4) it secretes immune response regulators to give the fetus immune protection against the mother. Abnormalities in the placenta can be the cause of death to the fetus. Mammalian …

Apoptotic And Epigenetic Induction Of Embryo Failure Following Somatic Cell Nuclear Transfer, Aaron Patrick Davis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The cloning of domestic species has tremendous potential, as the technology can be used in selective breeding, conservation, and the production of transgenic animals. The technique of cloning involves the transplant of DNA from a cell to a recipient gamete. Following transfer to a surrogate, the cloned embryo may successfully complete development to a live offspring. Despite intensive research, the success rate of cloning remains prohibitively low, and the potential benefits of cloning have not yet been realized. Embryos produced from cloning suffer from high rates of embryo degradation, implantation failure, and abortion. The goal of this dissertation research project …

Acid Ceramidase Maintains The Chondrogenic Phenotype Of Expanded Primary Chondrocytes And Improves The Chondrogenic Differentiation Of Bone Marrow-Derived Mesenchymal Stem Cells, Calogera M. Simonaro, Sylvain Sachot, Yi Ge, Xingxuan He, Victor A. Deangelis, Efrat Eliyahu, Daniel J. Leong, Hui B. Sun, Jeffrey B. Mason, Mark E. Haskins, Dean W. Richardson, Edward H. Schuchman

Animal, Dairy, and Veterinary Science Faculty Publications

Acid ceramidase is required to maintain the metabolic balance of several important bioactive lipids, including ceramide, sphingosine and sphingosine-1-phosphate. Here we show that addition of recombinant acid ceramidase (rAC) to primary chondrocyte culture media maintained low levels of ceramide and led to elevated sphingosine by 48 hours. Surprisingly, after three weeks of expansion the chondrogenic phenotype of these cells also was markedly improved, as assessed by a combination of histochemical staining (Alcian Blue and Safranin-O), western blotting (e.g., Sox9, aggrecan, collagen 2A1), and/or qPCR. The same effects were evident in rat, equine and human cells, and were observed in monolayer …

The Need To Address Black-Backed Jackal And Caracal Predation In South Africa, David L. Bergman, Ho De Waal, Nico L. Avenant, Michael J. Bodenchuk, Michael C. Marlow, Dale L. Nolte

Wildlife Damage Management Conference

Prior to 1990, the four provincial governments of South Africa had a variety of programs in place to manage predation by black-backed jackals and caracals through lethal and nonlethal management in close cooperation with livestock farmers. During the 1990s the official programmes were phased out due to a multitude of factors including lower predation rates. Today, thousands of livestock (primarily sheep and goats, but also cattle and wildlife) are lost each day in South Africa due to black-backed jackal and caracal predation. The actual numbers are not known because not all losses are accounted or reported. It also does not …

Beyond Surveillance: Towards The Management Of Feral Swine Diseases, Michael J. Bodenchuk, Brian Mesenbrink, Bruce Leland

Wildlife Damage Management Conference

Feral swine distribution and densities are greatest in Texas and related swine disease issues have emerged in a number of fronts. Beyond the standard surveillance protocols, the Texas Cooperative Wildlife Service program has initiated several feral swine projects to identify, contain or eliminate feral swine diseases and pathogens. This paper discusses these projects, the supportive data to quantify dis-ease management and the near-term trend in disease management.

Influence Of Double-Crested Cormorants On Food Web Productivity In Freshwater Ponds, Austin Butts, Kayla Frady, Kate L. Sheehan, Ron J. Johnson, Greg K. Yarrow

Wildlife Damage Management Conference

Conflicts with wildlife are often based on the perceptions and concerns of citizens, industries, and managers. The gregarious nature of Double-crested Cormorants (Phalacrocorax auritus; DCCO) makes their colonies highly conspicuous. Their feeding habits on forage and commercially important fishes have incited a human/wildlife conflict with this species. Colonies re-use roosting and nesting sites. In these areas guano deposits accumulate and are released into the environment where they have the potential to alter the food web through changes in productivity. This alteration can ultimately change the composition, abundance, and condition of fishery resources.

We investigate the influence of bird-derived …

Identification Of Putative Origins Of Introduced Pigs In Indiana Using Nuclear Microsatellite Markers And Oral History, Joe N. Caudell, Blake E. Mccann, Robert A. Newman, Rebecca B. Simmons, Steven E. Backs, Brandon S. Schmit, Richard A. Sweitzer

Wildlife Damage Management Conference

Feral swine (Sus scrofa) have been introduced throughout North America from various global locations (Mayer and Brisbin 1991). In some cases, sources for feral swine are provided through historical records, but for many newly established populations, the origins of feral swine are not known. Understanding the origins and dispersal patterns of feral swine is an important management consideration, because of the introduction of diseases to new locations, for prosecution of individuals who have trans-ported feral swine across state lines, and for allocating swine removal efforts appropriately to address swine translocations within a state or a management area.

Managing Raptors To Reduce Wildlife Strikes At Chicago’S O’Hare International Airport, Travis L. Guerrant, Craig K. Pullins, Scott F. Beckerman, Brian E. Washburn

Wildlife Damage Management Conference

Wildlife-aircraft collisions (wildlife strikes) have increased nationally over the past 22 years; denoted in the National Wildlife Strike Database that has been maintained by the Federal Aviation Administration (FAA) since 1990. Increasing wildlife populations and air traffic coupled with quieter, faster aircraft create a significant risk to aviation safety; the cost to the civil aviation industry is an estimated $718 million dollars annually. USDA/APHIS/Wildlife Services provides technical and direct assistance to over 785 airports and airbases around the United States, including Chicago’s O’Hare International Airport (ORD). At ORD, raptors are the most commonly struck bird guild accounting for 25% of …

Limiting Bird Damage To Fruit Crops In New York: Damage Assessments And Potential Management Strategies For The Future, Heidi M. Henrichs, Jason R. Boulanger, Paul D. Curtis

Wildlife Damage Management Conference

Fruit-crop losses due to birds are a longstanding and costly problem throughout the US. Although many deterrent techniques (e.g., acoustic scare tactics, netting, Mylar streamers, and chemical repellents) have been tested in the past, there is a lack of a systems approach to bird management. This study integrates economic and consumer impacts, as well region-specific information and landscape-level effects on bird foraging behaviors. This project integrates professional and landowner opinion to ensure long-term productivity, profitability, and environmental sustainability of fruit crop production. Our primary long-term goal is to provide fruit producers with cost-effective and environmentally-sustainable strategies for bird damage management, …

Effectiveness Of Fences And Undercrossings To Mitigate Deer-Vehicle Collisions On Interstate 80 In Eastern Nebraska, Aaron M. Hildreth, William L. Lawyer Iii, Scott E. Hygnstrom, Brian L. Johnson, Kurt C. Vercauteren

Wildlife Damage Management Conference

The Nebraska Department of Roads (NDOR) recently reconstructed a portion of Interstate 80 in eastern Nebraska between Lincoln and Omaha. Within a 12-mile stretch of the Interstate near the Platte River, DVCs ranged from 2.6-4.2 per mile per year and are among the highest in the state. As part of the reconstruction effort, 4 underpasses were modified to improve wildlife access and use in an effort to minimize DVCs. Fences were constructed along a 4-mile stretch encompassing all 4 underpasses to help funnel deer away from the roadway and toward the underpasses. The goal of this project was to evaluate …

Woody Vegetation Response To Over A Decade Of Deer Reduction In Indiana State Parks, Lindsay H. Jenkins, Michael A. Jenkins, Christopher R. Webster

Wildlife Damage Management Conference

White-tailed deer (Odocoileus virginianus) population sizes increased rapidly throughout Indiana in the latter half of the 20^th century due to favorable landscape conditions and regulated hunting. Hunting was historically prohibited in state parks and deer became abundant to the point that vegetation communities were severely degraded from decades of chronic deer herbivory. The Indiana Department of Natural Resources implemented controlled hunts in the 1990s to reduce deer population abundance and allow vegetation communities to recover. In 1996 and 1997, long-term vegetation monitoring plots were established in sixteen state parks and six historically-hunted reference areas for comparison. We …

An Overview Of The Chesapeake Bay Nutria Eradication Project, Stephen Kendrot

Wildlife Damage Management Conference

Nutria, (Myocaster coypus) a semi-aquatic rodent native to South America, were introduced to Maryland’s Eastern Shore near Blackwater National Wildlife Refuge (NWR) in 1943. By the 1970s, coastal wetlands on the Chesapeake Bay were deteriorating rapidly while nutria populations were expanding dramatically. In the mid-1990s, experiments conclusively linked marsh loss nutria herbivory, leading to the decision to eradicate nutria from the Delmarva Peninsula. A partnership of Federal, state and private organizations was convened and funding to investigate the feasibility of eradication was provided by the Nutria Control and Eradication Act of 2003. Following a brief investigation into the …

Methods For Detecting Nutria In An Eradication Campaign In The Chesapeake Bay Ecosystem, Stephen Kendrot

Wildlife Damage Management Conference

Detecting rare individuals is a critical component of an effective invasive species eradication program, particularly for prolific species such as nutria (Myocaster coypus). Early detection and rapid response protocols rely on the ability to detect newly invading animals, and effective monitoring of previously trapped areas requires discovering residual animals before they establish new populations. We present several observer-based and device-based methods that we have developed for detecting nutria including: shoreline surveys, detection rafts/platforms, detector dogs, remote triggered cameras, and ground searches. We discuss the need for evaluating method specific probabilities of detection and offer suggestions for reducing the …

Wastewater Treatment Wetlands: Potential Hazardous Wildlife Attractants For Airports, Robert A. Kennamer, I. Lehr Brisbin Jr., Carol S. Eldridge, D. Allen Saxon Jr.

Wildlife Damage Management Conference

Wetlands constructed for the treatment of urban wastewater effluent have gained worldwide popularity in recent decades. Placement of such wetlands near airports however, is strongly discouraged by the U.S. Federal Aviation Administration, other national airport authorities, and the International Bird Strike Committee because they attract birds that may increase strike risks for aircraft. Despite recognition of this and other wildlife hazards to aircraft and efforts implemented to limit such land-use activities near airports, validated methods are still urgently needed to mitigate wildlife hazards on or near airports because bird populations and bird-aircraft strikes in the U.S. and elsewhere around the …

Wild Pig Attacks On Humans, John J. Mayer

Wildlife Damage Management Conference

Attacks on humans by wild pigs (Sus scrofa) have been documented since ancient times. However, studies characterizing these incidents are lacking. In an effort to better understand this phenomenon, information was collected from 412 wild pig attacks on humans. Similar to studies of large predator attacks on humans, data came from a variety of sources. The various attacks compiled occurred in seven zoogeographic realms. Most attacks occurred within the species native range, and specifically in rural areas. The occurrence was highest during the winter months and daylight hours. Most happened under non-hunting circumstances and appeared to be unprovoked. …

Serologic Surveillance Of Selected Viral And Bacterial Pathogens In South Carolina’S Feral Swine Population, Sheldon F. Owen, Adam B. Leaphart, James O. Edens, Noel E. Myers

Wildlife Damage Management Conference

Feral swine (Sus scrofa) are considered an invasive species that is comprised of the wild descendants of domestic swine, European wild boar, and hybrids of these two species. Feral swine were historically associated with the major river drainages in Coastal South Carolina. However, natural range expansion and human release and relocation of feral swine appear to be sources of their expansion into areas not previously occupied. Although an exact estimate of feral swine population numbers is not available, in 2006 feral swine were reported in 42 of 46 South Carolina counties, compared to 46 of 46 counties reporting …