Life Sciences Commons^™

A Cytotoxic Peptide-Drug Conjugate For Tumor-Specific Delivery Of Co-Injected Molecules, Norio Miyamura, Chisato M Yamazaki, Yasuaki Anami, Kyoji Tsuchikama, Kazuki N Sugahara

Faculty, Staff and Student Publications

An ideal cancer therapy enhances anti-tumor effects while minimizing side effects. iRGD, a non-cytotoxic peptide that activates a tumor-specific molecular transport machinery, promotes the penetration of co-injected drugs into tumor tissues. Clinical trials have demonstrated its potential as a tumor-specific delivery scaffold and potentiator of anti-cancer agents. In this study, we synthesized an iRGD conjugate containing monomethyl auristatin F (MMAF), a highly toxic antimitotic agent, and characterized its dual function as a tumor-specific cytotoxic agent and co-injected drug delivery scaffold. The iRGD-MMAF conjugate internalized and killed cultured tumor cells in an αv integrin-dependent manner. When injected systemically, iRGD-MMAF homed selectively …

Electrochemical Detection Of Prostate Cancer—Associated Mirna-141 Using A Low-Cost Disposable Biosensor, Alexander Hunt, Gymama Slaughter

Center for Bioelectronics Publications

Prostate cancer is the second leading cause of cancer-related deaths among men in the United States. The early detection of aggressive forms is critical. Current diagnostic methods, including PSA testing and biopsies, are invasive and often yield false results. MicroRNA-141 (miRNA-141) has emerged as a promising non-invasive biomarker due to its elevated levels in the urine of patients with metastatic prostate cancer. Here, a low-cost, paper-based electrochemical biosensor for the sensitive detection of miRNA-141 in synthetic urine is reported. The device employs inkjet-printed gold electrodes on photopaper, functionalized with thiolated single-stranded DNA-141 capture probes for specific target recognition. The biosensor …

The Bioremediation Of Nutrients And Heavy Metals In Watersheds: The Role Of Floating Treatment Wetlands, Nirmal Kumar, Bhupinder Singh, Yuanze Chen, Abishek Kafle, Ram L. Ray, Sandeep Kumar, Xiaonan Shan, Venkatesh Balan

Civil & Environmental Engineering Faculty Publications

Floating treatment wetlands (FTWs) are engineered systems that utilize floating platforms planted with aquatic vegetation to treat polluted water such as stormwater, agricultural runoff, and wastewater. FTWs have emerged as promising and environmentally sustainable solutions for water purification. This review synthesizes the current knowledge on FTW design, plant selection, and performance evaluation. It highlights key factors influencing nutrient and heavy metal removal, including the hydraulic retention time, mat thickness, and types of plant species. Recent findings on the roles of root architecture, microbial interactions, and seasonal variability in treatment efficiency are also discussed. Additionally, the review explores advanced analytical methods …

Genome-Wide Snp Analyses Reveal High Gene Flow Of Endemic Smallscale Croaker (Boesemania Microlepsis) In The Lower Mekong Basin, Quyen Dang Ha Vu, Christopher E. Bird, Oanh Thi Truong, Sang Quang Tran, Ellen E. Biesack, Amanda S. Ackiss, Kent E. Carpenter, Binh Truy Dang

Biological Sciences Faculty Publications

The Smallscale Croaker, Boesemania microlepis, is a valuable fishery resource in the Mekong River basin that lacks clear biological data to understand its basic ecology and conservation management priorities. This species is common in the southernmost floodplain of the Mekong which extends from Tonlé Sap in Cambodia to the Mekong Delta in Vietnam. This floodplain is of particular biodiversity conservation concern because of the many upstream dams that restrict water flow in an ecology that relies heavily on a flood-pulse cycle. The literature regarding the biology B. microlepis in this region contains conflicting ideas that populations are both highly …

Intraspecific Variation In Plant–Fungal Interactions Across Tidal Elevation In A Salt Marsh, Torrie Hanley, Catherine Gehring, Ron Deckert, Behzad Mortazavi, Christina Richards, A. Randall Hughes

Biology Faculty Publications

Interspecific interactions vary depending on environmental and genetic factors, with intraspecific variation potentially altering these relationships. Specifically, intraspecific variation within host plants and their endosymbionts may affect above- and belowground interactions depending on environmental conditions. We examined how intraspecific variation within the salt marsh foundation species Spartina alterniflora and a common fungal root endosymbiont (Lulworthia sp.) affected their interactions. We conducted a glasshouse experiment comparing interactions between Spartina growth forms (tall-form from low marsh and short-form from high marsh) and Lulworthia isolates from different marsh locations, and a laboratory experiment exposing Lulworthia isolates from both endpoints of a tidal elevation …

Comparing The Development And Viability Of Horseshoe Crab Eggs Laid In Beach And Salt Marsh Habitats, Daniel A. Sasson, Christopher C. Chabot, Jo-Marie Kasinak, Jennifer Mattei Ph.D., Elizabeth U. Scott, Fletcher K. Hall, Michael R. Kendrick

Biology Faculty Publications

The horseshoe crab, Limulus polyphemus, has recently been found to spawn regularly in salt marshes, despite the long-held assumption that salt marsh sediments are not conducive for embryonic development. Here, we tested the prediction that eggs laid in the salt marsh would develop more slowly and be less viable than eggs laid on beaches. We flagged the nests of spawning horseshoe crabs in the marshes and beaches of three states—South Carolina, Connecticut, and New Hampshire—and then excavated those nests one or three weeks later. We staged the excavated embryos to compare developmental progress between marshes and beaches. We found …

Contemporary Normative Values For Five Common Static Standing Tasks On Firm And Compliant Floor Surfaces In Children Two To Thirteen Years, Nancy Darr

Funded Scholarship

Background/Objectives: Static upright tasks, including standing unsupported (SU), eyes closed (SEC), feet together (SFT), tandem (TS), and single limb (SLS), are routinely examined in children and are included in many norm-referenced measures. Existing normative values for these standing tasks may not apply to contemporary children and have not been established across wide age ranges. The primary purpose of this study was to investigate developmental trajectories of and relationships between four static standing positions (SPs [SU, SFT, TS, SLS]) in children aged 2 through 13 years who are developing typically. The effects of altered sensory input, including floor surface (firm and …

Repositioning Antimalarial Drugs As Anticancer Agents: Focus On Tafenoquine, Chris Barton

Funded Scholarship

Due to the expensive and lengthy process of drug design and approval, drug repurposing (or repositioning) has become another option for identifying preexisting molecules that may be used for alternative purposes. Recently, some antimalarial compounds have been shown to display efficacy against cancer cell proliferation. In this study, we provide evidence to suggest that multiple preexisting antimalarial drugs can reduce the viability of human cancer cells in culture. Furthermore, we provide the first evidence that one antimalarial, Tafenoquine (LD50 = 9.6 μM in HCT116 cells), is capable of decreasing viability with an efficacy comparable to Etoposide (LD50 = 15.2 μM …

Forgoing Nuclear: Nuclear Power Plant Closures And Carbon Emissions In The United States, Luke Petach

Funded Scholarship

This paper examines the effect of nuclear power plant decommissioning on electricity generation and carbon emissions in the United States. Using data on nuclear reactor closures in the United States between 1993 and 2022 and data on state-level carbon emissions and electricity generation from the Energy Information Administration (EIA), this paper adopts a difference-in differences (DiD) approach to estimate the effect of nuclear decommissioning. Two-way fixed-effects (TWFE) DiD estimates suggest a nuclear plant closure increases annual state-level per capita carbon emissions between 6% and 8%. The increase in state-level carbon emissions is driven by a substitution toward fossil fuel electricity—particularly …

Spectral Divergence Prioritizes Key Classes, Genes, And Pathways Shared Between Substance Use Disorders And Cardiovascular Disease, Everest Castaneda, Elissa Chesler, Erich J. Baker

Funded Scholarship

Substance use disorders (SUDs) are heterogeneous diseases with 

overlapping biological mechanisms and often present with co-occurring disease, 

such as cardiovascular disease (CVD). Gene networks associated with SUDs 

also implicate additional biological pathways and may be used to stratify 

disease subtypes. Node and edge arrangements within gene networks impact 

comparisons between classes of disease, and connectivity metrics, such as 

those focused on degrees, betweenness, and centrality, do not yield sufficient 

discernment of disease network classification. Comparatively, the graph 

spectrum’s use of comprehensive information facilitates hypothesis testing 

and inter-disease clustering by using a larger range of graph characteristics. 

By adding a connectivity-based …

Mathematical And Computational Modeling For Organic And Insect Frass Fertilizer Production: A Systematic Review, Malontema Katchali, Edward Richard, Henri E.Z. Tonnang, Chrysantus M. Tanga, Dennis Beesigamukama, Kennedy Senagi

All Peer-Reviewed Publications

Organic fertilizers have been identified as a sustainable agricultural practice that can enhance productivity and reduce environmental impact. Recently, the European Union defined and accepted insect frass as an innovative and emerging organic fertilizer. In the wider domain of organic fertilizers, mathematical and computational models have been developed to optimize their production and application conditions. However, with the advancement in policies and regulations, modelling has shifted towards efficiencies in the deployment of these technologies. Therefore, this paper reviews and critically analyzes the recent developments in the mathematical and computation modeling that have promoted various organic fertilizer products including insect frass. …

Knowledge And Acceptance Of Insects As Feed Source For Poultry Production In Conflict Affected Regions Of Cameroon, Chaba F. Ambele, Ngantu Harrison, Shaphan Y. Chia, Zewdu Abro, Komivi S. Akutse, Akum E. Akumeyam, Chrysantus M. Tanga

All Peer-Reviewed Publications

Globally, insects are increasingly being considered as sustainable and complementary feeds for poultry production. However, there is a lack of information on the perception of people in vulnerable and conflict-affected communities in Cameroon. This paper presents a survey on awareness and willingness to integrate insect meals in poultry feeds in the Northwest and Southwest regions of Cameroon. During this survey, purposive and snowball sampling procedures were used to collect data from 253 households. Among those interviewed, 32% were internally displaced people and 68% residents. In general, 97% of the respondents were aware that insects are a natural food source for …

Unpacking The Benefits Of Black Soldier Fly Frass Fertilizer Towards Nematode Suppression And Potato Production, Emmanuel O. Anedo, Dennis Beesigamukama, Benson Mochoge, Nicholas K. Korir, Solveig Haukeland, Xavier Cheseto, Moses Nyongesa, Patrick Pwaipwai, Sevgan Subramanian, Abdou Tenkouano, Betty Kibaara, Chrysantus M. Tanga

All Peer-Reviewed Publications

Potato production is hindered by soil degradation and nematode infestation. Mineral fertilizers and synthetic nematicides are costly and cause negative impacts on humans and the environment, while organic fertilizers are less effective for soil health and nematode management. This study demonstrates the contribution of black soldier fly frass fertilizer (BSFFF) in nematode suppression and potato productivity when compared to commercial mineral fertilizer, organic fertilizer (SAFI), and nematicide. The on-farm experiments consisted of eight treatments: BSFFF, SAFI, BSFFF+5%chitin, NPK+nematicide, 50%BSFFF+50%NPK, 50%SAFI+50%NPK, 50%BSFFF+5% chitin+50%NPK, and control (unfertilized soil). Results revealed that all fertilizer treatments significantly increased potato growth, number of tubers (34 …

Mapping Global Research On Mycotoxins In Aquafeed From Scientometric And Critical Perspectives, Menaga Meenakshisundaram, Sudarshan Shanmugam, Jimmy B. Mboya, Felix Sugantham, Kevin Obiero, Jonathan Munguti, Sunday Ekesi, Sevgan Subramanian, Shaphan Y. Chia, Dennis Beesigamukama, Rodrigue Yossa, Chrysantus M. Tanga

All Peer-Reviewed Publications

The global significance of mycotoxins in aquaculture is evident. However, regional vulnerabilities, effects, and inconsistent regulations on mycotoxin contamination remain underexplored. This study integrates a scientometric analysis of research on mycotoxins in aquafeed, published from 1992 to 2023 in Web of Science, with a conventional review of their occurrence in aquafeed and feed ingredients. Bibliometric tools, VOSviewer, and biblioshiny, were used to analyze global research trends, collaborations, and themes. We found a total of 181 publications, authored by 938 researchers from 49 countries, with Brazil leading (25 publications). The Toxins journal accounted for the most publications (23). Aflatoxins, particularly aflatoxin …

Edible Insects As A Sustainable Solution To Food Insecurity In Conflict-Ridden Regions Of Cameroon, F. C. Ambele, S. Y. Chia, D. Nsobinenyui, K. S. Akutse, N. H. Ngantu, A. E. Akumeyam, M. Kababu, C. M. Tanga

All Peer-Reviewed Publications

Edible insects are integral part of traditional Cameroonian dishes and delicacies valued for their nutrition and health/medicinal benefits. This study documents indigenous knowledge, practices, cultural relevance and the willingness to explore the untapped potential of insect farming in two conflict-ridden regions of Cameroon. Semi-structured questionnaires were used to collect data from 793 randomly selected households in the Northwest (NW) and Southwest (SW) regions. Our results revealed widespread awareness on the use of insects as food in the NW (91%) and SW (84%) regions. The most consumed species were the long-horned grasshoppers (90%), termites (85%), palm weevil larvae (76%), and giant …

Do Rates Matter? Validation Of Insect Frass Fertilizer Rates In A Vegetable Intensified Push-Pull Technology For Optimal Sustainable Production, Priscilla Mwikali Kimuli, Dennis Beesigamukama, Judy Wambua, Bonoukpoe Mawuko Sokame, Chrysantus Mbi Tanga, Frank Chidawanyika, Sevgan Subramanian, Daniel Munyao Mutyambai

All Peer-Reviewed Publications

Push–pull system intensification with vegetables (VIPPT) has contributed significantly in maintaining good control of lepidopteran pests and parasitic weeds with additional food and nutritional security benefits. However, the impact of integration of different rates of black soldier fly frass fertilizer (BSFFF) in the VIPPT to enhance productivity, has not been explored. This study investigated the effects of different BSFFF application rates on growth performance, pest infestation severity, diversity of natural enemies and yield of kale (Brassica oleracea L. var. acephala) grown under VIPPT in two agroecological zones. Plants were grown in soils amended with five different levels of BSFFF (0, …

The Physicochemical Properties, Biochemical Makeup, And Health Benefits Of Honey Produced From Stingless Bees (Apidae: Meliponini), Belay Gezahegn Gebreyes, Tilahun A. Teka, Yetenayet Bekele Tola, Metekia Tamiru, Nkoba Kiatoko

All Peer-Reviewed Publications

This review provides a comprehensive overview of stingless bee honey (SBH), focusing on its physicochemical properties, biochemical composition, and health benefits. SBH exhibits unique characteristics, including color, flavor, texture, and lower thermal stability, influenced by various botanical sources, stingless bee species, and diverse geographic and climatic conditions. These environmental factors, particularly floral diversity and climate, significantly affect SBH’s composition and functional properties, resulting in regional variations that impact its market value and health potential. The review details the composition ranges of SBH, which include moisture content (13.26%–41%), total acidity (12.59–270 meq/kg), reducing sugar (22.44%–78.95%), electrical conductivity (0.11–101.88 mS/cm), hydroxymethylfurfural (HMF) …

Nature-Based Land Management Practices And Yield Dynamics In Oil Palm Production: Insights From Indonesian Smallholder Growers, Kibrom T. Sibhatu, Martin Paul Tabe-Ojong, Hermanto Siregar

All Peer-Reviewed Publications

Nature-based land management (NLM) practices are increasingly promoted for their potential to bridge yield gaps and increase overall crop production. Yet, the extent of NLM adoption, the factors driving it, and its impact on yields remain unknown, particularly among smallholder farmers. This study addresses this knowledge gap using a unique three-round panel dataset from independent smallholder oil palm growers in Indonesia, focusing on three main NLM practices: composting, manual weeding, and organic soil amendments (SA) using lime and gypsum. We employ panel data estimators and a multivariate probit model to examine the yield effects of these practices and assess any …

Assessing The Impacts, Risks, And Vulnerabilities Of Extreme Heat In Learning Environments Of Puerto Rico In 2023, Pablo Méndez-Lázaro, Laura T. Cabrera-Rivera, Digna T. Rueda-Roa, Frank E. Muller-Karger, Manuel Heredia Morales, Monica V. Sanchez-Sepúlveda, Ernesto Rodríguez, Odalys Martínez, Ernesto Morales, Patricia Chardon-Maldonado, Wanda I. Crespo-Acevedo, Sarah Molinari, Masoud Ghandehari, Jorge E. Gonzalez-Cruz

Marine Science Faculty Publications

Introduction

Puerto Rico is experiencing anomalous heat episodes. The year 2023 was marked by unprecedented extreme heat events with negative impacts in Puerto Rico’s learning environments. This study aimed to understand the context, barriers, knowledge, risks, vulnerabilities, perceptions, employees’ profiles, attitudes, and symptoms related to extreme heat in learning environments.

Materials and Methods

We employed a mixed-methods approach combining: (1) Earth Observation Data and geospatial analysis, (2) an online survey for teachers, administrative staff, and other school employees from diverse educational settings and levels and (3) a series of participatory activities with stakeholders, practitioners and decision makers that led to …

Dissolved Organic Carbon In Coastal Waters: Global Patterns, Stocks And Environmental Physical Controls, Christian Lønborg, Isabel Fuentes-Santos, Cátia Carreira, Valentina Amaral, Javier Arístegui, Punyasloke Bhadury, Mariana Bernardi Bif, Maria Ll. Calleja, Qi Chen, Luiz C. Cotovicz, Stefano Cozzi, Bradley D. Eyre, E. Elena García-Martín, Michele Giani, Rafael Gonçalves-Araujo, Renee Gruber, Dennis A. Hansell, Johnna M. Holding, William Hunter, J. Severino Ibánhez, Valeria Ibello, Piotr Kowalczuk, Federica Maggioni, Paolo Magni, Patrick Martin, S. Leigh Mccallister, Xosé Anxelu Morán, Joanne M. Oakes, Helena Osterholz, Hyekyung Park, Digna Rueda-Roa, Jiang Shan, Eva Teira, Nicholas Ward, Youhei Yamashita, Liyang Yang, Qiang Zheng, Xosé Antón Álvarez-Salgado

Marine Science Faculty Publications

Dissolved organic carbon (DOC) in coastal waters is integral to biogeochemical cycling, but global and regional drivers of DOC are still uncertain. In this study we explored spatial and temporal differences in DOC concentrations and stocks across the global coastal ocean, and how these relate to temperature and salinity. We estimated a global median coastal DOC stock of 3.15 Pg C (interquartile range (IQR) = 0.85 Pg C), with median DOC concentrations being 2.2 times higher than in open ocean surface waters. Globally and seasonally, salinity was the main driver of DOC with concentrations correlated negatively with salinity, without a …

Comparative Olfactory Anatomy Of Wild And Hatchery-Raised Rainbow Trout (Oncorhynchus Mykiss), Nicole Rahman-Garnier

Cal Poly Humboldt theses and projects

Rainbow trout (Oncorhynchus mykiss) are an ecologically and culturally important salmonid species that exhibits diverse life history strategies, including anadromous and resident freshwater life cycles. Though many studies have examined their olfactory morphology, none have directly compared possible olfactory microstructural differences between wild and hatchery-raised populations. Histology and scanning electron microscopy (SEM) were employed to compare the gross anatomy and ultrastructure of olfactory rosettes in three O. mykiss populations: wild residents from Jacoby Creek (JC), a resident lineage of hatchery fish from Mad River Hatchery (MRH), and an anadromous lineage from the Cal Poly Humboldt (CPH) Hatchery. The …

The Impact Of Plant-Based Diets On Erythrocyte Function, Oxidative Stress, And Vascular Inflammation In Type 2 Diabetes Mellitus, Walter G. Craig

Cal Poly Humboldt theses and projects

Type 2 Diabetes Mellitus (T2DM) is a chronic metabolic disorder with diverse etiological contributors, characterized by insulin resistance, chronic inflammation, oxidative stress, and an increased risk of vascular complications. While much research has focused on plasma and serum markers of metabolic dysfunction, the role of erythrocytes in diabetic pathophysiology remains underexplored. This review examines the impact of dietary macronutrient composition, particularly plant-based diets, on erythrocyte function, oxidative stress, and vascular inflammation in T2DM. Red blood cells (RBCs) are not only oxygen carriers but also dynamic regulators of immune and inflammatory responses, with structural and functional alterations playing a critical role …

A Review Of Contact Dependent Interactions Among Encrusting Bryozoans, Sheena Emily Stephens-Norton

Cal Poly Humboldt theses and projects

This review of published literature is focused on bryozoan interactions and discusses overgrowths, “stalemates,” erect bi-laminate growths and fusions. Overgrowths, where one colony grows zooids atop another, have received the most attention in the scientific literature. Stalemates, where two colonies cease growth at the region of contact, have received relatively little research investigating the possible reasons for its occurrence. Erect, bi-laminate growth, following inter- and/or intraspecific contact between colonies, has also received little research, but could reflect mutualistic behavior of encrusting species to increase feeding and reproduction. Fusion of self-self-contacts appears common, yet non-self-fusions to form natural chimeras may also …

Community Assembly Across Environmental Gradients: Contrasting Patterns Of Funtional Convergence And Divergence In California Coastal Grasslands, Ernesto Chavez- Velasco

Cal Poly Humboldt theses and projects

Elucidating how plant community assembly processes interact across spatial scales to shape ecosystem function remains a central challenge in ecology. These processes are often hierarchical, with broad scale environmental filters constraining the composition of local communities. I investigated these hierarchical processes across three California coastal grassland sites spanning a ~1000 km gradient. At these sites, I measured community composition, standing biomass, four functional traits (plant height, specific leaf area, leaf dry matter content, and leaf lobedness), and estimated species’ environmental niches. To identify assembly mechanisms, I used null models to assess functional convergence or divergence and scaled these patterns with …

Patterns Of Kinship And Sociality In North American River Otters, Whitney E. Vickers

Cal Poly Humboldt theses and projects

Previous studies of river otters (Lontra canadensis) in coastal Humboldt County, California have documented varying social group compositions over the last four decades. It has been assumed that otters travel between coastal wetland sites, but the extent of movement has been unknown. Socially, river otters have been observed alone, in small family groups that consisted of an otter mom and pup(s), in larger helper groups that consisted of an otter mom, pup(s), and at least one additional adult or juvenile (helpers), and in all-adult social groups. Until now it was unknown whether the composition of social groups was …

Diversity, Genomics And Antimicrobial Resistance Of Coagulase-Negative Staphylococcus: A Literature Review, Kathleen Okeefe

Electronic Theses & Dissertations (2024 - present)

Members of the gram-positive bacterial genus Staphylococcus have historically been classified into coagulase-positive Staphylococcus (CoPS) and coagulase-negative Staphylococcus (CoNS). This classification is based on the ability of clotting of plasma by the coagulase enzyme, which converts fibrinogen to fibrin. CoNS species are ubiquitous commensals that frequently colonize the skin and mucosal surfaces. They are also opportunistic pathogens implicated in many human and animal infections. The evolutionary history of CoNS has generally been overlooked because of the historical lack of recognition for their clinical importance and poor taxonomic sampling. They are often perceived as being less or non-pathogenic, especially compared to …

Antibody-Induced Multicellular Behaviors Of Salmonella Typhimurium, Samantha K. Lindberg

Electronic Theses & Dissertations (2024 - present)

Salmonella enterica is a globally distributed bacterial pathogen that is commonly acquired through consumption of contaminated food and water. The enterica subspecies includes over 1500 unique subvariants, or serovars, that are classified by antigen presentation. Due to its global environmental prevalence, broad host range, and increasing pathogenicity, serovar Typhimurium is of particular concern for human and animal health, as well as food safety. Once in the gastrointestinal tract, Salmonella Typhimurium (STm) exploits host immune mechanisms, implements an arsenal of virulence factors, and outcompetes the microbiota to invade the intestinal epithelium. While STm infections are generally self-limiting and relatively mild, emerging …

Technological Development Of In-Cell Nmr: Microfluidic, Metabolomic, And Fluxomic Approaches, Nicholas Sciolino

Electronic Theses & Dissertations (2024 - present)

In the fields of structural biology, metabolomics, and fluxomics, there is a driving, technique-based concern when it comes to high-resolution spectrometry and its marriage to biological and physiological relevance. Sample preparation often involves cellular perturbation, lysate separation schemes, combinations with non-biological reagents, and timeline slack. Conceptually, the farther we get from the cell, the greater the potential disparity between what exists in vivo and our in vitro manipulations. This is particularly true when seeking to collect data on transfected targets of interest, and on sensitive metabolic equilibria that occur on the order of minutes. The question remains: if we are …

Conserved A-Rich Regions In The 3’ Utr Of Zika Virus Differentially Affect Viral Gene Expression, Kristen Kaytes

Electronic Theses & Dissertations (2024 - present)

Following its discovery in 1947, Zika virus garnered little attention in the global stage until a rapidly spreading epidemic brough the virus to the global stage in 2015. Continuous advances in research have begun to further the understanding of the molecular biology of Zika virus, however much is still unknown. Much of our understanding of the virus comes from cross reference to other viruses within the same family, such as Dengue virus and West Nile virus. A commonality of these viruses is that they resemble cellular mRNAs and have a single-stranded positive-sense RNA genome that contains a 5’-cap but lacks …

Investigating Rna Dysfunction Of Inherited Neuromuscular And Neurodevelopmental Disease, Jacob H. Schroader

Electronic Theses & Dissertations (2024 - present)

ITPase deficiency is a rare but fatal, autosomal recessive enzyme deficiency involving encephalopathy, microcephaly, congenital cataracts, hypotonia, developmental delay, and dilated cardiomyopathy. Within a decade since the original description of the severe form in humans, there are huge gaps in the field regarding the underlying molecular mechanisms driving pathogenesis resulting from ITPase deficiency. Past studies have focused on characterization of the organism level ITPase-deficient phenotype, but the molecular and cellular characterization remains to be fully described. Due to the biochemical function and established biological role of the ITPase enzyme, investigation into the consequences of inosine accumulation and misincorporation into RNA …