Life Sciences Commons^™

Genetic Integrity Assessment Of Cryopreserved Tomato (Lycopersicon Esculentum Mill.) Genotypes, Ana Coste, Dana Suteu, Ioan Bacila, Constantin Deliu, Sergiu Valimareanu, Adela Halmagyi

Turkish Journal of Biology

Shoot tips of five tomato (Lycopersicon esculentum Mill.) genotypes were successfully cryopreserved by droplet vitrification. Recovered plants were studied for genetic stability by two different assays: amplified fragment length polymorphism (AFLP) using 4 primer combinations and sequencing of lycopene $\beta$-cyclase gene (LCY-B) from leaves. The highest shoot regeneration after cryopreservation was 70% (Pontica) following 24 h osmoprotection in 0.5 M sucrose and 30 min dehydration in plant vitrification solution 2 (PVS2). The data inferred from AFLP showed no genetic dissimilarities between in vitro regenerants derived from cryopreserved tissues compared with the noncryopreserved controls. Although a single nucleotide polymorphism, a G→T …

An Integrative Approach To Unravel The Ceratitis Far (Diptera, Tephritidae) Cryptic Species Complex: A Review, Marc De Meyer, Hélène Delatte, Sunday Ekesi, Kurt Jordaens, Blanka Kalinová, Aruna Manrakhan, Maulid Mwatawala, Gary Steck, Joannes Van Cann, Lucie Vaníčková, Radka Břízová, Massimiliano Virgilio

All Peer-Reviewed Publications

This paper reviews all information gathered from different disciplines and studies to resolve the species status within the Ceratitis FAR (C. fasciventris, C. anonae, C. rosa) complex, a group of polyphagous fruit fly pest species (Diptera, Tephritidae) from Africa. It includes information on larval and adult morphology, wing morphometrics, cuticular hydrocarbons, pheromones, microsatellites, developmental physiology and geographic distribution. The general consensus is that the FAR complex comprises C. anonae, two species within C. rosa (so-called R1 and R2) and two putatitve species under C. fasciventris. The information regarding the latter is, however, too limited to draw final conclusions on specific …

Occurrence Of Arbuscular Mycorrhizal Fungi And Fusarium In Tc Banana Rhizosphere Inoculated With Microbiological Products In Different Soils In Kenya, R. W. Mukhongo, M. A. Kavoo-Mwangi, M. E. Kahangi, E. M. Ateka, A. B. Were, J. R. Okalebo, M. E. Mutegi, K. E. Mwangi, T. T. Tepeni, K. S. Njuguini, J. M. Onguso, S. A. Okoth, J. M. Jefwa

All Peer-Reviewed Publications

The impact of microbiological commercial products (PHC Biopak, Rhizatech and ECO-T) on the occurrence of mycorrhizae and Fusarium in the rhizosphere of tissue culture banana (Gros Mitchel cv.) was assessed. Tissue cultured banana plantlets were inoculated with PHC Biopak (Bacillus), Rhizatech (mycorrhiza) and ECO-T (T. harzianum) under greenhouse conditions using a completely randomized design in a Vertisol, Rhodic Ferralsol and Humic Nitisol sampled from the major banana growing regions in Kenya. Potted plants were later established under field conditions in the three agro ecological zones. Roots and soils sampled at end of potting and at flowering were assessed for AM …

Control Of Vegetable Pests In Benin - Farmers' Preferences For Eco-Friendly Nets As An Alternative To Insecticides, Faustin Vidogbéna, Anselme Adégbidi, Rigobert Tossou, Françoise Assogba-Komlan, Mathieu Ngouajio, Thibaut Martin, Serge Simon, Laurent Parrot, Kerstin K. Zander

All Peer-Reviewed Publications

We investigated if eco-friendly nets (EFNs) are a viable and acceptable alternative to extremely high levels of insecticide use in vegetable production. Using a choice experiment, we found that vegetable producing farmers in Benin preferred all of the characteristics of EFNs except the higher labor requirements. The nets had been distributed in a trial phase for free but in the long run farmers would need to purchase the EFNs. The break-even point for investing in nets was found to vary with the lifespan of EFNs, their purchase price and potential health benefits from avoiding large quantities of insecticides. To break …

Dementia And Primary-Care Health Measures:Hearing, Gait, And Markers Of Inflammation, Elsa Lindgren

Honors Theses and Capstones

Dementia is a syndrome associated with declining cognitive function that has a variety of types and causes, and is encountered frequently in general medical practice. Researchers are actively exploring possible risk factors for dementia. The St. Louis University Mental Status (SLUMS) exam is a dementia-screening exam used in primary care visits to detect cognitive impairment that may be a sign of dementia. This study compared scores on the SLUMS exam to other measures recorded in a typical primary care visit in 86 patients of age 65 and older to look for correlations between indicators of health, such as physical examination …

Effects Of Age, Density, And Seasonality On Molt Pattern In The Mammal Genus (Peromyscus), Rebecca Catherine Graves

Honors Theses and Capstones

Molting, or replacement of pelage (hair) in mammals, occurs during ontogeny as individuals transition from juveniles to adults. Environmental factors can cause variation in molt in many species for thermoregulatory and camouflage purposes. Within and among years molt can vary by time and age or by reproductive status. Past studies have found differences in molt pattern and timing depending upon age, and between captive reared and wild caught individuals. There has been little investigation into the molting characteristics of Peromyscus leucopus and P. maniculatus, specifically in comparison to adults and juveniles. I used molt observed from museum specimens …

Carnivore Diet Identification Through Scat And Genetic Analysis In Namibia, Africa, Alicia J. Walsh

Honors Theses and Capstones

Worldwide the cheetah population is declining making them Africa’s most endangered large cat. Namibia, Africa currently has the largest population of cheetahs in the world. During the summer of 2014, I did scat analysis of carnivores on the property of the Cheetah Conservation Fund (CCF) in Namibia in order to better understand the predators that compete with the cheetah and how the ecosystem works as a whole. I worked at CCF for nine weeks to analyze the diets of carnivores in the area through genetic and scat analysis. Analyzing carnivore feces would ultimately identify the diet of various carnivores in …

The Expression Pattern Of Death Associated Protein Kinase1 In Normal Dorsal Root Ganglion Neurons And Following Peripheral Nerve Injury, Maryam Sulaiman Mohammed Al Saadi

Dissertations

Death-associated protein kinase1 (DAPK1) is a calcium/calmodulin (Ca2+/CaM) regulated serine/threonine kinase. An increasing body of evidence supports the significance of DAPK1 protein in cancer and CNS diseases. The role of DAPK in peripheral nerve regeneration and neuropathic pain remains completely unexplored. The aim of this study is to investigate the expression pattern of DAPK1 along with key proand anti-apoptotic cell signaling molecules (p53, Bax, Akt, ERK5, p38) and to verify the possibilities of DAPK1-NMDA NR2B relationship in dorsal root ganglion neurons (DRG) after 2 hours, 7 days and 14 days following a sciatic nerve injury. Gene expression analysis and immunohistochemistry …

The Expression Pattern Of Death Associated Protein Kinase1 In Normal Dorsal Root Ganglion Neurons And Following Peripheral Nerve Injury, Maryam Sulaiman Mohammed Al Saadi

Theses

Death-associated protein kinase 1 (DAPK1) is a calcium/calmodulin (Ca^2+/CaM) regulated serine/threonine kinase. An increasing body of evidence supports the significance of DAPK 1 protein in cancer and CNS diseases. The role of DAPK in peripheral nerve regeneration and neuropathic pain remains completely unexplored. The aim of this study is to investigate the expression pattern of DAPK1 along with key pro-and anti-apoptotic cell signaling molecules (p53, Bax, Akt, ERK5, p38) and to verify the possibilities of DAPKI1-NMDA NR2B relationship in dorsal root ganglion neurons (DRG) after 2 hours, 7 days and 14 days following a sciatic nerve injury. Gene …

Developing A Gene Editing System To Study Haplodiploidy In The Jewel Wasp, Nasonia Vitripennis, Emily A. Muller

Scripps Senior Theses

Hymenopteran insects, which include all ants, bees and wasps, reproduce through a poorly understood form of reproduction known as haplodiploidy. A promising experimental system for understanding this developmental process is the jewel wasp, Nasonia vitripennis. A critical aspect of using Nasonia as a model is establishing an effective means for editing specific genes of interest so that their functions can be studied through genetic means. For my thesis research, I performed a pilot study of the gene editing method known as CRISPR in Nasonia. I targeted the single heterochromatin protein 1 (HP1) gene present in the Nasonia genome …

Self-Cleaning Applications Of Tio2 By Photo-Induced Hydrophilicity And Photocatalysis, Swagata Banerjee, Dionysios Dionysiou, Suresh Pillai

Articles

Self-cleaning materials have gained considerable attention for both their unique properties and practical applications in energy and environmental areas. Recent examples of many TiO2-derived materials have been illustrated to understand the fundamental principles of self-cleaning hydrophilic and hydrophobic surfaces. Various models including those proposed by Wenzel, Cassie-Baxter and Miwa-Hashimoto are discussed to explain the mechanism of self-cleaning. Examples of semiconductor surfaces exhibiting the simultaneous occurrence of superhydrophilic and superhydrophobic domains on the same surface are illustrated, which can have various advanced applications in microfluidics, printing, photovoltaic, biomedical devices, anti-bacterial surfaces and water purification.

Several strategies to improve the efficiency of …

Identification Of Key Proteins In Human Epithelial Cells Responding To Bystander Signals From Irradiated Trout Skin, Hayley Furlong, Richard Smith, Jiaxi Wang, Colin Seymour, Carmel Mothersill, Orla L. Howe

Articles

Radiation-induced bystander signaling has been found to occur in live rainbow trout fish (Oncorhynchus mykiss). This article reports identification of key proteomic changes in a bystander reporter cell line (HaCaT) grown in low-dose irradiated tissue-conditioned media (ITCM) from rainbow trout fish. In vitro explant cultures were generated from the skin of fish previously exposed to low doses (0.1 and 0.5 Gy) of X-ray radiation in vivo. The ITCM was harvested from all donor explant cultures and placed on recipient HaCaT cells to observe any change in protein expression caused by the bystander signals. Proteomic methods using 2-dimensional (2D) gel electrophoresis …

An Investigation Of The Relationship Between Axonal Injury, Biomarker Expression And Mechanical Response In A Rodent Head Impact Acceleration Model, Yan Li

Wayne State University Dissertations

In the United States 1.4 million people sustain traumatic brain injury (TBI) each year, resulting in 235,000 hospitalizations and 50,000 fatalities annually. Traumatic axonal injury (TAI) is a serious outcome of TBI that accounts for 40-50% of hospitalizations due to head injury and one third of the mortality due to TBI, and it is difficult to diagnose and evaluate. The purpose of this dissertation is to determine mechanical injury predictors for TAI and identify potential biomarkers to evaluate TAI.

In this dissertation, a modified Marmarou impact acceleration injury model was developed to allow the monitoring of velocity of the impactor …

Effects Of A Training Program To Enhance Autonomy Supportive Behaviors Among Youth Soccer Coaches, Jody L. Langdon, Robert J. Schlote, Brandonn S. Harris, Glenn P. Burdette Iii, Sara Rothberger

Health Sciences & Kinesiology: Faculty Publications

This study aimed to evaluate the prevalence and implementation of a training emphasizing the use of autonomy supportive coaching behaviors among youth soccer coaches in game-play situations as well as evaluating its effects on motivational processes among athletes. Participants included youth sport soccer coaches and their intact teams. Coaches received a series of autonomy-supportive coaching training interventions based on successful programs in general and physical education (Reeve, Jang, Carrell, Jeon & Barch, 2004; Cheon, Reeve & Moon, 2012). Athletes completed questionnaires to assess perceived autonomy support, basic need satisfaction, and motivation (Harris & Watson, 2011). Observations indicated coaches were not …

Inter-Rater Reliability And Validity Of The Australian Football League's Kicking And Handball Tests, Ashley Cripps, Luke S. Hopper, Christopher Joyce

Health Sciences Papers and Journal Articles

Talent identification tests used at the Australian Football League’s National Draft Combine assess the capacities of athletes to compete at a professional level. Tests created for the National Draft Combine are also commonly used for talent identification and athlete development in development pathways. The skills tests created by the Australian Football League required players to either handball (striking the ball with the hand) or kick to a series of 6 randomly generated targets. Assessors subjectively rate each skill execution giving a 0-5 score for each disposal. This study aimed to investigate the inter-rater reliability and validity of the skills tests …

Assessment Of Fundamental Movement Skills In Australian Children: The Validation Of A Fundamental Motor Skills Quotient (Fmsq), Beth Hands, Fleur Mcintyre

Health Sciences Papers and Journal Articles

Objectives: The development of proficient fundamental movement skills (FMS) in children is important for physical, cognitive and social development, and to establish a foundation for an active lifestyle. Many teachers, coaches and physical activity program deliverers use real time observation of individual skill performances during physical activities to assess proficiency in young children. However, a valid method to quantify these observations to provide an overall motor competence is not available.

Design: A small pilot validation study using the Bland Altman method to compare scores on the McCarron Assessment of Neuromuscular Development (MAND) and a Fundamental Movement Skill Quotient (FMSQ) (M …

Pathway Efficiency And Relative Age In The Australian Football League Talent Pathway, Ashley Cripps, Luke S. Hopper, Christopher Joyce, James Veale

Health Sciences Papers and Journal Articles

Sporting bodies invest substantial resources into the identification and development of talented junior athletes. However, low retention of junior athletes into senior competition has been reported. One mechanism affecting retention may be selections biased by relative age. This study examined the pathway involvement and birth distribution of athletes (n=2519) selected into the Australian Football League Talent Pathway, over six seasons. Only half of athletes selected into professional teams had any involvement in the talent pathway. Birth distributions at every pathway stage were biased towards relatively older athletes, with relatively older athletes more likely to be de-selected as the pathway progressed. …

Does Motor Competence Affect Self-Perceptions Differently For Adolescent Males And Females?, Elizabeth Rose, Dawne Larkin, Helen Parker, Beth Hands

Health Sciences Papers and Journal Articles

Little is understood about the impact of level of motor competence on self-perceptions in adolescence, in particular how this may differentially affect girls and boys. A sample of 1,568 14-year-old participants (766 girls and 802 boys) were grouped into four motor competence levels (very low to high) based on the McCarron Assessment of Neuromuscular Development (MAND). Self-perceptions were assessed using the Self-Perception Profile for Adolescents. Boys had higher self-perceptions of global self-worth, athletic competence, and physical appearance, whereas girls had higher scores for close friendships and behavioral conduct. Main effects in the predicted direction were found for motor competence for …

The Role Of Alternative Splicing In The Control Of Immune Homeostasis And Cellular Differentiation, Mehmet Yabas, Hannah Elliott, Gerard F. Hoyne

Health Sciences Papers and Journal Articles

Alternative splicing of pre-mRNA helps to enhance the genetic diversity within mammalian cells by increasing the number of protein isoforms that can be generated from one gene product. This provides a great deal of flexibility to the host cell to alter protein function, but when dysregulation in splicing occurs this can have important impact on health and disease. Alternative splicing is widely used in the mammalian immune system to control the development and function of antigen specific lymphocytes. In this review we will examine the splicing of pre-mRNAs yielding key proteins in the immune system that regulate apoptosis, lymphocyte differentiation, …

Integrated Multiple-Tactic Management Of The Redbanded Stink Bug On Soybeans In Louisiana, Miyanda Nzala Moonga

LSU Doctoral Dissertations

Stink bugs (Hemiptera: Pentatomidae) are major pests of soybeans in Louisiana and heavy infestations often lead to economic losses. The stink bug species complex has changed in the past decade with the prevalence of the invasive redbanded stink bug, Piezodorus guildinii (Westwood), which causes greater damage than other stink bug species. Moreover, control of the redbanded stink bug has been faced with challenges because it is less sensitive to recommended insecticides. Therefore, studies were conducted to evaluate different control options for P. guildinii. Among the studies conducted was the current status of egg parasitoids of stink bugs in Louisiana. Telenomus …

Health Effects Of Dietary Fermentable Fiber (Resistant Starch), Diana Gabriela Carvajal-Aldaz

LSU Doctoral Dissertations

Resistant starch (RS) reaches the large intestine for fermentation and is considered a prebiotic. We wanted to determine if we could reduce fermentation for future mechanistic studies and how there is improved insulin sensitivity in human studies with or without increased incretin hormone glucagon-like peptide 1 (GLP-1). Two main studies were performed. In the first main study, low potency antibiotics (Ampicillin 1g/L and Neomycin 0.5g/L) were added to the drinking water of rats to reduce fermentation of RS. Antibiotics were used either prior (first) to or during (second) feeding of RS. Results demonstrated that low potency antibiotics given prior to …

Effects Of The Deepwater Horizon Oil Spill On Deep Sea Fishes, Arianne Ella Leary

UNF Graduate Theses and Dissertations

The Deepwater Horizon Oil Spill (DWH) released about 4.4 million barrels of crude oil into the Gulf of Mexico (GOM), making it one of the largest oil spills in U.S. history. Additionally, the depth of the spill (i.e., 1500 meters) created a unique research opportunity because most oil spills occur at the surface and affect coastal rather than deepwater habitats. Polycyclic aromatic hydrocarbons (PAHs) are the most toxic components of oil, and are often the focus of oil exposure studies. PAHs are quickly metabolized by vertebrates; therefore, indicators of biological responses to PAH exposure (PAH “biomarkers”) such as the levels …

The Tyrosine Kinase Bcef And The Phosphotyrosine Phosphatase Bced Of Burkholderia Contaminans Are Required For Efficient Invasion And Epithelial Disruption Of A Cystic Fibrosis Lung Epithelial Cell Line, Ana S. Ferreira, Ines N. Silva, Fabio Fernandes, Ruth Pilkington, Máire Callaghan, Siobhán Mcclean, Leonilde M. Moreira

Articles

Bacterial tyrosine kinases and their cognate protein tyrosine phosphatases are best known for regulating the biosynthesis of polysaccharides. Moreover, their roles in the stress response, DNA metabolism, cell division, and virulence have also been documented. The aim of this study was to investigate the pathogenicity and potential mechanisms of virulence dependent on the tyrosine kinase BceF and phosphotyrosine phosphatase BceD of the cystic fibrosis opportunistic pathogen Burkholderia contaminans IST408. The insertion mutants bceD::Tp and bceF::Tp showed similar attenuation of adhesion and invasion of the cystic fibrosis lung epithelial cell line CFBE41o- compared to the parental strain B. contaminans …

2015 Weed Science Research Report – White Section, Ndsu Weed Science, Dept. Of Plant Sciences

Plant Sciences Weed Science Reports

The Weed Science team at North Dakota State University conduct field research in the State of North Dakota. This specific document provides environmental, indexes, abbreviations and collaborators in 2015.

2015 Weed Science Research Report – Pink Section, Ndsu Weed Science, Dept. Of Plant Sciences

Plant Sciences Weed Science Reports

The Weed Science team at North Dakota State University conduct field research in the State of North Dakota. This specific document reports on field research conducted in 2015. It includes work on leafy spurge and yellow toadflax in North Dakota.

Integrated Roadside Vegetation Management Technical Manual [2015], Josh Brandt, Kirk Henderson, Jim Uthe, Maria Urice

Faculty Book Gallery

The objective of this publication is to provide basic technical support for new and existing Iowa county roadside programs. The manual is also intended to provide guidance to policymakers and engineers interested in adopting or expanding integrated vegetation management in county right-of-way.

Above- And Belowground Biomass And Soil Respiration In A Low-Input Perennial Biofuel Production System, Jordan Young, Jessica Abernathy, Kenneth Elgersma

Undergraduate Student Work

Backgroud

• Global climate change largely depends on the atmospheric carbon balance, of which soil respiration is a significant component.
• Native perennial prairie vegetation is being tested as an alternative to corn for renewable biofuel production.
• Mixtures of this vegetation are considered ‘carbon negative’ because net CO2 sequestration exceeds atmospheric release¹.
• Studies have shown that aboveground biomass and the rate of carbon sequestration are both increased by planting a diverse mixture of species versus a monoculture¹.

Research Question:

How does the diversity of biofuel vegetation mixtures affect soil respiration, aboveground biomass and belowground biomass?

Density And Diversity Of Bees In The Midwestern Agricultural Landscape: Influence Of Surrounding Agricultural Land Use And Biofuel Candidate Crops, Andrew J. Ridgway, Ai Wen, Kenneth Elgersma

Undergraduate Student Work

Recent trends in land management practices have led to dramatic population decline in bees and other insect pollinators (Cameron et al. 2011). Concerns about “Colony Collapse Disorder” in domestic honeybees, for example, have received widespread high-profile attention in the scientific community. While concerns have centered mainly on the domestic honeybee, native bees also provide indispensable, cost-free pollination services to crops production. Despite the value of native bee species, little is known about them in the Midwest region, and recent studies suggest their populations may be in decline specifically due to a lack of native vegetation in this highly agricultural landscape. …

Self-Reported Race/Ethnicity In The Age Of Genomic Research: Its Potential Impact On Understanding Health Disparities, Tesfaye B. Mersha, Tilahun Abebe

Faculty Work

This review explores the limitations of self-reported race, ethnicity, and genetic ancestry in biomedical research. Various terminologies are used to classify human differences in genomic research including race, ethnicity, and ancestry. Although race and ethnicity are related, race refers to a person’s physical appearance, such as skin color and eye color. Ethnicity, on the other hand, refers to communality in cultural heritage, language, social practice, traditions, and geopolitical factors. Genetic ancestry inferred using ancestry informative markers (AIMs) is based on genetic/genomic data. Phenotype-based race/ethnicity information and data computed using AIMs often disagree. For example, self-reporting African Americans can have drastically …

Prairie Power Project: Determining Maximum Sustainable Production Of Biomass With A Mixture Of Prairie Species, Cynthia Cambardella, Kenneth Elgersma, Eric Giddens, Mark Myers, Mark Sherrard, Daryl Smith

Tallgrass Prairie Publications and Reports

Native prairie species mixtures appear to have great promise as bioenergy feedstocks. These perennial plants store carbon and produce greater net energy than row crops because: (1) after initial establishment they require little or no energy input such as cultivation, fertilizer, pesticides and irrigation; (2) they sequester excess CO2; and (3) all above ground biomass is used rather than just the seed. Furthermore, prairie grows well on non-prime, nutrient-poor, agricultural soils and will not displace food crops from higher quality agricultural land.