Life Sciences Commons^™

Polyphenolic Profile And Antioxidant Activities Of Oolong Tea Infusion Under Various Steeping Conditions, Xinguo Su, Jun Duan, Yueming Jiang, Xuewu Duan, Feng Chen

Publications

The phenolic profile and antioxidant activities of oolong tea extract were investigated after tea was steeped in 90 or 100 oC water for 3 or 10 min. The extraction yield increased with increasing temperature and extended steeping time. However, higher temperature and longer time (100 oC water for 10 min) led to loss of phenolics. The aqueous extract of oolong tea (AEOT) at 100 oC for 3 min exhibited the strongest antioxidant activity. The major polyphenolic components of the AEOT were identified as (-)-epigallocatechin (EGC), (-)-epigallocatechin gallate (EGCG) and (-)-epicatechin-3-gallate (ECG). The two major catechins (EGC and EGCG) in the …

1,3,7-Trideacetylkhivorin, Huaping Zhang, Don Vanderveer, Xi Wang, Feng Chen, Michael J. Wargovich

Publications

The title D-seco limonoid, named 1,3,7-trideacetylkhivorin (systematic name: 14,15:21,23-diepoxy-1,3,7-trihydroxy-4,4,8-trimethyl-D-homo-24-nor-17-oxochola-20,22-diene-16-one), C₂₆H₃₆O₇, was isolated from the stem bark of African mahogany Khaya senegalensis (Meliaceae). The four fused six-membered rings adopt chair, chair, boat and half-chair conformations. The five-membered furan ring is disordered by a 180° rotation about the bond linking it to the pyran ring. The crystal structure is stabilized by strong classical O-HO hydrogen-bond interactions to form a network.

Cerebrospinal Fluid And Serum Biomarkers Of Cerebral Malaria Mortality In Ghanaian Children, Winston Anderson

Department of Biology Faculty Publications

Plasmodium falciparum can cause a diffuse encephalopathy known as cerebral malaria (CM), a major contributor to malaria associated mortality. Despite treatment, mortality due to CM can be as high as 30% while 10% of survivors of the disease may experience short- and long-term neurological complications. The pathogenesis of CM and other forms of severe malaria is multi-factorial and appear to involve cytokine and chemokine homeostasis, inflammation and vascular injury/repair. Identification of prognostic markers that can predict CM severity will enable development of better intervention.Postmortem serum and cerebrospinal fluid (CSF) samples were obtained within 2-4 hours of death in Ghanaian children …

Lpe Center News, November 2007

Livestock and Poultry Environmental Learning Center: Newsletters

In this issue:

• December Webcast Showcases Innovative Manure Treatment Technologies from SBIR Program

•.New and Improved LPELC Website Set for a March, 2008 Launch

• EPA AgSTAR Program Encourages Use of Anaerobic Digesters

• National Air Mitigation Conference Call for Papers Closes December 1

Hexapod Herald - Vol. 19, No. 5, November 2007

Hexapod Herald and Other Entomology Department Newsletters

Contents:
Congratulations
Welcome
Publications
Grants
Student News
Meet a Distance Student
Travel
Blasts from the Pasts
From the Office
An Entomological Halloween

Stenoxybacter Acetivorans Gen. Nov., Sp. Nov., An Acetate-Oxidizing Obligate Microaerophile Among Diverse O2-Consuming Bacteria From Termite Guts, John T. Wertz, John A. Breznak

University Faculty Publications and Creative Works

In termite hindguts, fermentative production of acetate - a major carbon and energy source for the insect - depends on efficient removal of inwardly diffusing oxygen by microbes residing on and near the hindgut wall. However, little is known about the identity of these organisms or about the substrate(s) used to support their respiratory activity. A cultivation-based approach was used to isolate O2-consuming organisms from hindguts of Reticulitermes flavipes. A consistently greater (albeit not statistically significant) number of colonies developed under hypoxia (2% [vol/vol] O 2) than under air, and the increase coincided with the appearance of morphologically distinct colonies …

Physiological Ecology Of Stenoxybacter Acetivorans, An Obligate Microaerophile In Termite Guts, John T. Wertz, John A. Breznak

University Faculty Publications and Creative Works

Stenoxybacter acetivorans is a newly described, obligately microaerophilic β-proteobacterium that is abundant in the acetate-rich hindgut of Reticulitermes. Here we tested the hypotheses that cells are located in the hypoxic, peripheral region of Reticulitermes flavipes hindguts and use acetate to fuel their O2-consuming respiratory activity in situ. Physical fractionation of R. flavipes guts, followed by limited-cycle PCR with S. acetivorans-specific 16S rRNA gene primers, indicated that cells of this organism were indeed located primarily among the microbiota colonizing the hindgut wall. Likewise, reverse transcriptase PCR of hindgut RNA revealed S. acetivorans-specific transcripts for acetate-activating enzymes that were also found in …

2007 Scholars And Artists Bibliography, Michael Schwartz Library, Cleveland State University, Friends Of The Michael Schwartz Library, Joanne E. Goodell Ph.D.

Scholars and Artists Bibliographies

This bibliography was created for the annual Friends of the Michael Schwartz Library Scholars and Artists Reception, recognizing scholarly and creative achievements of Cleveland State University faculty, staff and emeriti. Dr. Joanne Goodell was the guest speaker.

Forage News [2007-11], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• Kentucky Grazing Conference
• Forage Spokesman Featured at Grazing Conference
• KFGC Presents Forage Awards
• Sources for Hay
• If You Procrastinate, It May Be Too Late
• Buffalo Trace Hay Auction
• Volunteer Corn
• Winter Feeding Will Be a Challenge
• State Summary Of 2007
• Environmental Effects of Increased Atmospheric Carbon Dioxide
• Upcoming Events

Supporting Complex Thematic, Spatial And Temporal Queries Over Semantic Web Data, Matthew Perry, Amit P. Sheth, Farshad Hakimpour, Prateek Jain

Kno.e.sis Publications

Spatial and temporal data are critical components in many applications. This is especially true in analytical domains such as national security and criminal investigation. Often, the analytical process requires uncovering and analyzing complex thematic relationships between disparate people, places and events. Fundamentally new query operators based on the graph structure of Semantic Web data models, such as semantic associations, are proving useful for this purpose. However, these analysis mechanisms are primarily intended for thematic relationships. In this paper, we describe a framework built around the RDF metadata model for analysis of thematic, spatial and temporal relationships between named entities. We …

Inside Unlv, Cate Weeks, Diane Russell, David Ashley, Grace Russell

Inside UNLV

No abstract provided.

Cloning, Analysis And Functional Annotation Of Expressed Sequence Tags From The Earthworm Eisenia Fetida, Mehdi Pirooznia, Ping Gong, Xin Guan, Laura S. Inouye, Kuan Yang, Edward J. Perkins, Youping Deng

Faculty Publications

Background

Eisenia fetida, commonly known as red wiggler or compost worm, belongs to the Lumbricidae family of the Annelida phylum. Little is known about its genome sequence although it has been extensively used as a test organism in terrestrial ecotoxicology. In order to understand its gene expression response to environmental contaminants, we cloned 4032 cDNAs or expressed sequence tags (ESTs) from two E. fetida libraries enriched with genes responsive to ten ordnance related compounds using suppressive subtractive hybridization-PCR.

Results

A total of 3144 good quality ESTs (GenBank dbEST accession number EH669363–EH672369 and EL515444–EL515580) were obtained from the raw clone …

34/1 | Excavations At Kadesh Barnea (Tell El-Qudeirat) 1976–1982, Part 1: Text, Rudolph Cohen, Hannah Bernick-Greenberg

IAA Reports—Monograph Series of the Israel Antiquities Authority

This volume, comprised of two parts: text and plates, presents the results of the excavations at Tell el-Qudeirat, located in an oasis in the northern Sinai desert and identified as biblical Kadesh Barnea. The excavations, which took place over ten seasons (1976–1982), revealed a stratigraphic sequence of three superimposed Iron Age fortresses. The plans and architecture of the fortresses, as well as the pottery, including the family of ‘Negebite Ware’, are described.

Nebline, Nov./Dec. 2007

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Internet is Popular Way to Access Extension
When it Comes to Being Wired, Youth are Leading the Way
Storage Methods to Reduce Loss of Hay Quality
Grain Stubble Rental Rates
Organic Production
Winter Protection for Roses
Make a Holiday Wreath
Winter Gardening Activities for Kids of All Ages
Turkey Tips
Cheesy Turkey Lasagna Recipe
Mediterranean Diet Offers Healthy Benefits
FREE Seminar, “Making Many Meals Using a Few Ingredients”
Mediterranean Soup
President’s Notes — Alice’s Analysis
Household Hints: Caring for Fleece
The Holidays When There are No Close Family Ties
FCE News & Events
Holiday Safety Tips
Holiday Gifts Needed for …

The Leading Object: November 2007

Leading Object

Content:
Perspectives by John C. Owens
NCTA’s 100 Cow Program Aims to Help Beginning Farmers, Ranchers
Longtime Agronomist Furrer Dies
Public Service to Ag Awards Given
Maunder Receives First Henry Beachell Alumnus Award
Nebraska Master Conservationist Award Winners Announced
Wilson Receives Employee Award
Three with UNL Ties Served as Equine Residents at Texas A&M
Terry Assumes Post of CIT Director
Boeckner Named Interim Director of Panhandle Research and Extension

The Zebrafish Fleer Gene Encodes An Essential Regulator Of Cilia Tubulin Polyglutamylation, Narendra Pathak, Tomoko Obara, Steve Mangos, Yan Liu, Iain A. Drummond

Neuroscience: Faculty Publications

Cilia and basal bodies are essential organelles for a broad spectrum of functions, including the development of left-right asymmetry, kidney function, cerebrospinal fluid transport, generation of photoreceptor outer segments, and hedgehog signaling. Zebrafish fleer (flr) mutants exhibit kidney cysts, randomized left-right asymmetry, hydrocephalus, and rod outer segment defects, suggesting a pleiotropic defect in ciliogenesis. Positional cloning flr identified a tetratricopeptide repeat protein homologous to the Caenorhabditis elegans protein DYF1 that was highly expressed in ciliated cells, flr pronephric cilia were shortened and showed a reduced beat amplitude, and olfactory cilia were absent in mutants, flr cilia exhibited ultrastructural defects in …

A Mutant Dec-1 Transgene Induces Dominant Female Sterility In Drosophila Melanogaster, Daniel K. Spangenberg, Gail L. Waring

Biological Sciences Faculty Research and Publications

The Drosophila dec-1 gene produces three proproteins required for female fertility and eggshell assembly. The three proproteins are distinguished by their C termini. Fc106, the most abundant proprotein, is cleaved within the vitelline membrane to three mature derivatives in a developmentally regulated manner. To define sequences within fc106 that are critical for its function, we created wild-type and mutant versions of an fc106 cDNA transgene. The functional consequences of the mutations were assessed in dec-1⁴, a female-sterile splicing mutant that does not produce the fc106 isoform. The fertility of dec-1⁴ females was restored by the introduction of …

Beneficial Insects: Beetles, Erin W. Hodgson, Ron Patterson

All Current Publications

There are many beneficial beetles in Utah besides lady beetles or ladybugs. Beetles can significantly reduce common insect and weed problems and in some cases eliminate the need for chemical control. Examples of beneficial beetles include: ground beetles, rove beetles, tiger beetles and tortoise beetles. Many of these beetles are native to Utah, while others have been purposely introduced to help control damage from exotic insect and weed pests.

Beneficial Insects: Mantids, Erin W. Hodgson, Ron Patterson

All Current Publications

Mantids refer to an entire predatory group of insects in the order Mantodea. The term “mantis” or “praying mantis” actually refers to a particular genus of mantids. Therefore, only some mantids belong to the genus Mantis. There are about 2,000 species of mantids worldwide and at least 20 species in the U.S. Two mantid species dominate Utah gardens: European mantid and Chinese mantid.

Beneficial Insects: True Bugs, Erin W. Hodgson, Ron Patterson

All Current Publications

True bugs have piercing-sucking mouthparts and belong to the order Hemiptera and suborder Heteroptera. There are more than 38,000 species of true bugs, and are most closely related to aphids, cicadas, and leaf hoppers. Although some true bugs are considered pests, about one-third are predaceous. True bugs have forewings, or hemelytra, that cross over the back at rest, but sometimes the wings are reduced.

Beneficial Insects: Beetles, Erin W. Hodgson, Ron Patterson

All Current Publications

No abstract provided.

Beneficial Insects: Mantids, Erin W. Hodgson, Ron Patterson

All Current Publications

No abstract provided.

Are There Rearrangement Hotspots In The Human Genome?, Max A. Alekseyev, Pavel A. Pevzner

Faculty Publications

In a landmark paper, Nadeau and Taylor [18] formulated the random breakage model (RBM) of chromosome evolution that postulates that there are no rearrangement hotspots in the human genome. In the next two decades, numerous studies with progressively increasing levels of resolution made RBM the de facto theory of chromosome evolution. Despite the fact that RBM had prophetic prediction power, it was recently refuted by Pevzner and Tesler [4], who introduced the fragile breakage model (FBM), postulating that the human genome is a mosaic of solid regions (with low propensity for rearrangements) and fragile regions (rearrangement hotspots). However, the rebuttal …

Initial Sequence And Comparative Analysis Of The Cat Genome, J. U. Pontius, James C. Mullikin, Douglas R. Smith, Agencourt Bioscience Corporation, Kerstin Lindblad-Toh, Sante Gnerre, Michele Clamp, Jean Chang, R. Stephens, Beena A. Neelam, Natalia Volfovsky, Alejandro A. Schaffer, R. Agarwala, Kristina Narfstrom, William J. Murphy, Urs Giger, Alfred L. Roca, Agostinho Antunes, Marilyn Menotti-Raymond, Naoya Yuhki, Jill Pecon-Slattery, Warren E. Johnson, Guillaume Bourque, Glenn Tesler, Nisc Comparative Sequencing Program, Stephen J. O'Brien

Biology Faculty Articles

The genome sequence (1.9-fold coverage) of an inbred Abyssinian domestic cat was assembled, mapped, and annotated with a comparative approach that involved cross-reference to annotated genome assemblies of six mammals (human, chimpanzee, mouse, rat, dog, and cow). The results resolved chromosomal positions for 663,480 contigs, 20,285 putative feline gene orthologs, and 133,499 conserved sequence blocks (CSBs). Additional annotated features include repetitive elements, endogenous retroviral sequences, nuclear mitochondrial (numt) sequences, micro-RNAs, and evolutionary breakpoints that suggest historic balancing of translocation and inversion incidences in distinct mammalian lineages. Large numbers of single nucleotide polymorphisms (SNPs), deletion insertion polymorphisms (DIPs), and …

Gordie News, November 2007, West Chester University Of Pennsylvania

Gordon Natural Area History & Strategic Plan Documents

No abstract provided.

Detecting Shifts In Soil Microbial Community Structure And Function Post Landspread Of Manure Or Biosolids Containing Antimicrobial Chemicals, Kelly Lehnert, Sharon A. Clay, Susan Gibson, Volker Brozel

Agronomy, Horticulture and Plant Science Faculty Publications

Soil microbial diversity and community interaction play an indispensable role in 2,4-dichorophenoxyacetic acid (2,4-D) herbicide degradation. The addition of manure or municipal waste biosolids through landspreading may alter soil community structure and function if these materials contain antimicrobial chemicals like chlortetracycline (CTC), administered in livestock feed to promote animal growth and health or tetracycline (TET) utilized in human health. In this study, soil applied with manure collected from pigs fed standard CTC levels was compared to soil containing manure from control pigs fed no CTC, and a comparison of soil applied with biosolids containing TET or without TET to distinguish …

Biofuel Feedstocks: The Risk Of Future Invasions, Joseph M. Ditomaso, Jacob N. Barney, Alison M. Fox

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

In an effort to decrease greenhouse gas emissions, expand domestic energy production, and maintain economic growth, public and private investments are being used to pursue dedicated feedstock crops for biofuel production. Unlike food crops grown for grain-based ethanol (e.g., corn), which require high inputs of fertilizers and pesticides and typically are grown on prime agricultural land, proposed lignocellulose-based energy crops (e.g., switchgrass) typically have a neutral or negative carbon budget, require relatively few economic or environmental inputs, and can be cultivated on marginal, lower-productivity land. Thus, a rapidly growing industry related to crop selection, cultivar improvement, and conversion technologies is …

Identifying Mechanistic Models Of Spatial Behavior Using Pattern-Based Modeling: An Example From Lizard Home Ranges, Andrew J. Tyre, Gregory D. Kerr, Brigitte Tenhumberg, C. Michael Bull

School of Biological Sciences: Faculty Publications

Landscape and population level patterns form through the aggregation of responses of individual organisms to heterogeneity. Spatial organization within a population can range from random overlap of individual home ranges, to completely exclusive territories, with most populations falling somewhere between these two extremes. A fundamental question in behavioral ecology concerns the factors that influence the degree of spatial overlap of home ranges, and the processes that determine how likely it is that an individual will access resources over its home range. However, traditional experimental methods are not always practical or possible. Pattern-based modeling is an alternative, non-intrusive technique for explaining …

Convergence Of Agriculture And Energy: Ii. Producing Cellulosic Biomass For Biofuels, Steven L. Fales, J. Richard Hess, Wallace Wilhelm, Don Erbach, William D. Provine, Kenneth P. Vogel, Todd A. Peterson, Edward C. A. Runge

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Global energy demand is increasing as known global petroleum supplies are decreas¬ing. Calls to supplement or replace the current fossil-based energy system with new, envi¬ronmentally and economically sustainable strategies continue to increase, especially in light of more expensive traditional energy sources. Various governmental agencies and working groups have set aggressive targets and timelines for decreasing fossil fuel consumption by substituting bio-based energy (Bush 2007; Foust et al. 2007; Perlack et al. 2005; Smith et al. 2004). The alignment and continuity of these goals is illustrated in Figure 1.
Current biofuel production in the United States relies primarily on corn grain …

The Ecological Significance Of The Herbaceous Layer In Temperate Forest Ecosystems, Frank S. Gilliam

Biological Sciences Faculty Research

Despite a growing awareness that the herbaceous layer serves a special role in maintaining the structure and function of forests, this stratum remainsan underappreciated aspect of forest ecosystems. In this article I review and synthesize information concerning the herb layer’s structure,composition, and dynamics to emphasize its role as an integral component of forest ecosystems. Because species diversity is highest in the herb layeramong all forest strata, forest biodiversity is largely a function of the herb-layer community. Competitive interactions within the herb layer candetermine the initial success of plants occupying higher strata, including the regeneration of dominant overstory tree species. Furthermore, …