Life Sciences Commons^™

Fundulus As The Premier Teleost Model In Environmental Biology: Opportunities For New Insights Using Genomics, Bernard Rees

Biological Sciences Faculty Publications

A strong foundation of basic and applied research documents that the estuarine fish Fundulus heteroclitus and related species are unique laboratory and field models for understanding how individuals and populations interact with their environment. In this paper we summarize an extensive body of work examining the adaptive responses of Fundulus species to environmental conditions, and describe how this research has contributed importantly to our understanding of physiology, gene regulation, toxicology, and ecological and evolutionary genetics of teleosts and other vertebrates. These explorations have reached a critical juncture at which advancement is hindered by the lack of genomic resources for these …

Arkansas Corn And Grain Sorghum Performance Tests 2007, D. G. Dombek, R. D. Bond, I. L. Eldridge, R. M. Pryor

Arkansas Agricultural Experiment Station Research Series

Corn and grain sorghum performance tests are conducted each year in Arkansas by the University of Arkansas Division of Agriculture. The tests provide information to companies marketing seed within the state, and aid the Arkansas Cooperative Extension Service in formulating recommendations for producers.

The Population Genetics Of The Wood Frog, Rana Sylvatica, Across Its Geographic Range, Tina M. Squire

Theses and Dissertations

This study aimed to determine the level of genetic variation across the continental-wide range of the wood frog, Rana sylvatica. Levels of genetic differentiation between sampled populations were investigated as was the possible locations of glacial refugia for this species. DNA microsatellites were used as the genetic marker. This study found significant genetic differentiation across the geographic range of Rana sylvatica that increased with geographic distance. In addition three likely glacial refugia, Alaska, New York and the southern Appalachians, were identified.

A subset of the populations used in the geographic range study was used to investigate the patterns at a …

Corn, Unknown Unknown

All Current Publications

This fact sheet lists details of corn crop insurance.

Glucose-6-Phosphate Dehydrogenase (G6pd) Screening In Pakistani Neonates: To Be Or Not To Be, Bushra Moiz

Department of Pathology and Laboratory Medicine

No abstract provided.

Enhanced Uv Inactivation Of Adenoviruses Under Polychromatic Uv Lamps, Karl G. Linden, Jeanette Thurston, Raymond Schaefer, James P. Malley Jr.

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Adenovirus is recognized as the most UV-resistant waterborne pathogen of concern to public health microbiologists. The U.S. EPA has stipulated that a UV fluence (dose) of 186 mJ cm^-2 is required for 4-log inactivation credit in water treatment. However, all adenovirus inactivation data to date published in the peer-reviewed literature have been based on UV disinfection experiments using UV irradiation at 253.7 nm produced from a conventional low-pressure UV source. The work reported here presents inactivation data for adenovirus based on polychromatic UV sources and details the significant enhancement in inactivation achieved using these polychromatic sources. When full-spectrum, medium-pressure …

Designation Of A Neotype For Leptodactylus Gracilis (Duméril And Bibron, 1840) (Amphibia: Leptodactylidae), Rafael O. De Sá, A. Dubois, A. Ohler

Biology Faculty Publications

The examination of the preserved specimens in the herpetological collection of the Museum National d'Histoire Naturelle, along with a review of the original literature, indicates that no extant specimen can be undoubtedly identified as the holotype of Leptodactylus gracilis (DumCri.l and Bibron, 1840). Furthermore, it revealed that the type locality recently assigned to this taxon is in error.

Arkansas Soybean Performance Tests 2007, D. G. Dombek, R. D. Bond, I. L. Eldridge, R. M. Pryor

Arkansas Agricultural Experiment Station Research Series

Soybean cultivar performance tests are conducted each year in Arkansas by the University of Arkansas Division of Agriculture. The tests provide information to companies developing cultivars and/or marketing seed within the State, and aid the Arkansas Cooperative Extension Service in formulating cultivar recommendations for soybean producers.

Can Collective Action And Capacity Building Reduce Vulnerability Among Settled Pastoralists?, D. Layne Coppock, Solomon Desta, Getachew Gebru, Seyoum Tezera

Environment and Society Faculty Publications

In 2001 PARIMA and her partners began to create collective-action groups among illiterate, settled pastoralists in southern Ethiopia. These groups—dominated by women—focused on savings-led microfinance, small business, and livestock marketing to increase incomes and diversify livelihoods. Fifty-nine groups with over 2,100 members were formed using intensive capacity- building methods. After six years we wanted to compare group members with their neighbors who never participated in the PARIMA program. We surveyed 180 individuals from groups and paired control (traditional) communities. Respondents were asked to assess the extent that they perceived positive, negative, or no change in their lives over the past …

Diffusion Of Collective-Action Innovations Among Pastoralists In Liben District, Ethiopia, D. Layne Coppock, Solomon Desta, Getachew Gebru, Getachew Kassa, Seyoum Tezera

Environment and Society Faculty Publications

In 2001 PARIMA and her partners began to create collective-action groups among illiterate, settled pastoralists in Ethiopia. These groups—soon dominated by women—focused on savings-led microfinance, small business activity, and livestock marketing to increase incomes and diversify livelihoods. Fifty-nine groups with over 2,100 members were formed using intensive training methods, and they have subsequently merged into legally recognized cooperatives. We regard this approach as successful and sustainable. We were curious, however, if “the word has spread” and collective-action has spontaneously arisen beyond our immediate project area. Preliminary findings from recent surveys of settlements in Liben District indicate that diffusion of collective-action …

Stakeholder Alliance Facilitates Re-Introduction Of Prescribed Fire On The Borana Plateau Of Southern Ethiopia, D. Layne Coppock, Getachew Gebru, Solomon Desta, Lemma Gizachew, Dadhi Amosha, Feyissa Taffa

Environment and Society Faculty Publications

The implementation of a new prescribed fire program to restore bush-encroached rangelands in southern Ethiopia—and hence increase herbaceous forage supplies for livestock—is given as an example of an integrated action involving multiple institutions to address resource-management problems. The resumption of planned fire—traditionally conducted over hundreds of years by pastoralists until the 1970s—was preceded by key activities including mobilization of the pastoral community, review of government proclamations regarding use of fire, interaction with policy makers, capacity building among pastoralists and agency personnel on how to implement and manage planned fires, development of an overall prescribed burn plan, selection of geo-referenced sites, …

Spatial Distribution Of Cocoon Nests And Egg Clusters Of The Silkmoth Anaphe Panda (Lepidoptera: Thaumetopoeidae) And Its Host Plant Bridelia Micrantha (Euphorbiaceae) In The Kakamega Forest Of Western Kenya, N. Mbahin, S. K. Raina, E. N. Kioko, J. M. Mueke

All Peer-Reviewed Publications

A study on the spatial distribution of the silkmoth Anaphe panda (Boisduval) cocoon nests, egg clusters and the host plant Bridelia micrantha (Hochst) Baill. was conducted in two different habitats of the Kakamega Forest of western Kenya: Ikuywa (indigenous forest) and Isecheno (mixed indigenous forest). The mean densities of cocoon nests, egg clusters and B. micrantha were significantly different in the two blocks and were not semi-randomly distributed in the two habitats. The host plants were underdispersed in the indigenous forest, whereas they were overdispersed in the mixed indigenous forest. The cocoon nests were overdispersed and the silkmoth egg clusters …

Collective Action Among Agro-Pastoralists In Baringo District, Kenya: Identifying And Nurturing The Entrepreneurs, D. Layne Coppock, Mark N. Mutinda, Stellamaris K. Muthoka, Abdillahi A. Aboud

Environment and Society Faculty Publications

The rural population of Baringo District in the Rift Valley of north-central Kenya faces numerous challenges including widespread environmental degradation and poverty. The region has endured decades of failed development projects, proliferation of food aid, and has been studied extensively. We have recently undertaken a different approach focused on bottom-up participatory action research and outreach among the Il Chamus and Tugen ethnic communities. The objective is to explore new ways to empower local people via provision of information, novel experiences, and initial access to resources to allow them to envision an alternative future and implement their own activities to better-manage …

Building Effective Community Participation And Stakeholder Partnerships To Promote Positive Change In The Southern Ethiopian Rangelands, D. Layne Coppock, Solomon Desta, Getachew Gebru, Seyoum Tezera, Dadi Amosha

Environment and Society Faculty Publications

Recently there has been increased recognition that authentic community participation and creating strong inter-institutional partnerships are both important in the process of capacity building, generating innovation, and sustaining development achievements in rural Africa. Here we summarize a process of community participation and formation of institutional partnerships in support of pastoral risk-management interventions over the past seven years on the Borana Plateau. Community involvement has been stimulated using Participatory Rural Appraisal (PRA) methods. This has resulted in the proliferation of pastoral collective-action groups that have diversified livelihoods, engaged markets, and improved incomes. Implementing and sustaining positive change, however, has also been …

Semi-Captive Rearing Of The African Wild Silkmoth Gonometa Postica (Lepidoptera: Lasiocampidae) On An Indigenous And A Non-Indigenous Host Plant In Kenya, Boniface M. Ngoka, Esther N. Kioko, Suresh K. Raina, Jones M. Mueke, David M. Kimbu

All Peer-Reviewed Publications

The life cycle of the African wild silkmoth Gonometa postica Walker was studied between September 2000 and September 2001 in the Uasin Gishu District of western Kenya with Acacia mearnsii de Wild and Acacia hockii de Wild as host plants. The initial population of G. postica was set up from healthy live pupae in cocoons collected from host plants in the study area. Oviposition was carried out in net sleeves and small plastic cages. Moth emergence and oviposition were bimodal, occurring between September and October 2000 and between March and April 2001, respectively. Larvae were reared in semi-captivity by using …

Index To Volume 75

Nebraska Bird Review

Accipiter species 22-23

Ahlering, M. A. 60

Alexander, Irene 19

Allen, Sue 19

Allwine Prairie Preserve 15

American Ornithologists' Union 93

Ames CBC 17-30

Amiotte, Sue 61

Anderson, Chris 19

Anderson, T. R. 120

Ani, Groove-billed 88

Aubushon, Kathy 18

Avocet, American 41, 76, 106, 122

Halsey Fall Field Days

Nebraska Bird Review

The 2007 NOU Fall Field Days were held at the 4-H Camp in the Nebraska National Forest near Halsey on September 28-30, 2007. Among the approximately 45 in attendance were two first time attendees: Juanita Rice of Fairmont and Tim Hajda of Broken Bow.

Wayne Mollhoff spoke on Friday night about the progress on the new breeding bird atlas: "A Funny Thing Happened on the Way to the Atlas," and on Saturday night, Bob Rooney did a multimedia presentation entitled "A Sandhills Odyssey."

Field trips to Cherry, Logan, and Brown Counties were led by Clem Klaphake, Mark Brogie, and Dave …

Fall Field Report, August-November 2007, W. Ross Silcock

Nebraska Bird Review

This was essentially a normal fall season in Nebraska, with no major weather events or significant shifts in breeding or migration ranges, although a possible exception is a first record of Lesser Goldfinch breeding in the state. One observer made the point, though, that the hard freeze in the spring affected seed and fruit crops for fall, most conspicuously resulting in fewer large American Robin flocks. Excellent water conditions in the Rainwater Basin were welcome, but few herons and egrets were present, and no unusual breeding events were reported there.

As winter approached, however, increased numbers of a few finch …

A Physiological Basis For Controlling Leafy Spurge On Nebraska Rangeland, Rob B. Mitchell, Corey Moffet, Ron Sosebee

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Applying herbicides at the appropriate physiological stage is an important consideration to effectively control leafy spurge.

Phylogenetic Affinities Of Plagiocirrus Van Cleave And Mueller, 1932 With The Description Of A New Species From The Pascagoula River, Mississippi, Stephen S. Curran, Robin M. Overstreet, Vasyl V. Tkach

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Plagiocirrus loboides n. sp. (Digenea: Opecoelidae) is described from Fundulus nottii, F. dispar blairae, F. chrysotus, and Notemigonus crysoleucas from the Pascagoula River in Mississippi. Plagiocirrus loboides differs from P. primus Van Cleave and Mueller, 1932, by having a longer postcecal space (14-25% of body length vs. about 7%); a more anterior vitellarium (extending at least to the middle of the ventral sucker vs. to its posterior margin); and larger eggs (51-71 μm long by 23-34 μm wide vs. 40-55 μm long by 30-35 μm wide). Plagiocirrus loboides differs from P. testeus Fritts, 1959, by having a …

Gene Therapy And Cellular Transplantation : Towards A Combination Strategy For Spinal Cord Injury Repair., Ahmed Abdelzaher Abdellatif

Electronic Theses and Dissertations

The combination of viral mediated gene delivery, tissue engineering, and Schwann cell (SC) transplantation offer a promising strategy to enhance axonal regeneration and functional recovery following spinal cord injury (SCI). The rationale and feasibility of using such combination has been extensively reviewed in Chapter 1. The study presented in Chapter 2 showed that lentiviral vectors are most suitable in situations where stable long term transgene expression is needed, while adenovirus and retrovirus are more suited for transient gene delivery. Tissue engineering combined with Schwann cell (SC) transplantation is a promising method to enhance regeneration and remyelination of axons following a …

Most Caenorhabditis Elegans Micrornas Are Individually Not Essential For Development Or Viability, Eric A. Miska, Ezequiel Alvarez-Saavedra, Allison L. Abbott, Nelson C. Lau, Andrew B. Hellman, Shannon M. Mcgonagle, David P. Bartel, Victor R. Ambros, H. Robert Horvitz

Biological Sciences Faculty Research and Publications

MicroRNAs (miRNAs), a large class of short noncoding RNAs found in many plants and animals, often act to post-transcriptionally inhibit gene expression. We report the generation of deletion mutations in 87 miRNA genes in Caenorhabditis elegans, expanding the number of mutated miRNA genes to 95, or 83% of known C. elegans miRNAs. We find that the majority of miRNAs are not essential for the viability or development of C. elegans, and mutations in most miRNA genes do not result in grossly abnormal phenotypes. These observations are consistent with the hypothesis that there is significant functional redundancy among miRNAs …

Compromised Weaponry Enhances Crayfish Tailflipping, Sandra Y. Espinoza, Zen Faulkes

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

As a defense strategy, many crustaceans perform one of two well described stereotyped single fast tailflips (~6 ms in adult crayfish), which are triggered by a neural circuit that includes medial giant interneurons (MG) and lateral giant interneurons (LG). Tailflips can also occur without these giant interneurons firing, however; these non-giant tailflips are variable, repetitive, and significantly longer (~150 ms). Previous work showed that crayfish exposed to natural stimulus respond with a non-giant tailflip significantly faster than when presented with an artificial stimulus and that complete removal of claws lowered tailflipping threshold. We tested whether compromising weapons would influence tailflipping. …

Changes In Shell Morphology Of Elimia Comalensis (Gastropoda: Pleuroceridae) From The Edwards Plateau, Texas, Russell L. Minton, Scott A. Reese, Kim Swanger, Kathryn E. Perez, David M. Hayes

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Species in the pleurocerid genus Elimia are important components of freshwater systems in the eastern United States, but little is known about their natural history. Using dual-simultaneous linear regression and principal components analyses, we show patterns of morphological change in two populations of E. comalensis from the Edwards Plateau, Texas. Both populations had similar rates of change for all shell measurements analyzed, and both showed similar decreases in growth as total length of shell increased. However, the size at which growth slowed was different between populations, and small shells tended to have a consistent shape, while larger shells were more …

Longitudinal Tracking Of Cytokines After Acute Exposure To Tuberculosis: Association Of Distinct Cytokine Patterns With Protection And Disease Development, Rabia Hussain, Najeeha Talat, Firdaus Shahid, Ghaffar Dawood

Department of Pathology and Laboratory Medicine

Household contacts (HCs) of patients with tuberculosis (TB) are at higher risk of infection as well as the development of active disease. Longitudinal tracking of antigen-specific cytokines after acute exposure may significantly advance our understanding of the dynamic changes in cytokine patterns associated with disease establishment. To achieve this objective, we carried out a prospective cohort study with healthy HCs after exposure to TB. The patterns of cytokines (gamma interferon [IFN-gamma] and interleukin 10 [IL-10]) in response to mycobacterial antigens (culture filtrate [CF] proteins) and nonspecific mitogens (phytohemagglutinin [PHA] and lipopolysaccharide [LPS]) were assessed at 0, 6, 12, and 24 …

Implications Of Introduced Mule Deer On Santa Catalina Island, California : Their Impacts, Population Ecology, And Management, Thad A. Manuwal

Theses and Dissertations

A small group of mule deer were introduced to Santa Catalina Island in the early
1930s. The mule deer population increased through the 1940s and 1950s and remains widespread and abundant today. Large browsing ungulates are not native to Santa Catalina Island and there is concern that nonnative mule deer are damaging endemic trees and shrubs on the island when foraging. This study was designed to develop quantitative information on diets, foraging behavior, movements, and population biology of mule deer on Catalina Island.

Diet analysis indicated mule deer are consuming a wide variety of native and
endemic plants found on …

Trapping, Survival, And Probable Causes Of Mortality Of Chukar Partridge, Aaron Clark Robinson

Theses and Dissertations

We present an efficient and effective method for trapping chukars (Alectoris chukar) on artificial water sources. We compared a B-trap, a prairie chicken (Tympanuchus cupido) walk-in trap, a modified quail recall trap, and a newly designed Utah walk-in-funnel trap. Our Utah funnel trap outperformed standard techniques by more than 65%, and exceeded previous published results by 35%. Use of this method allows researchers and managers the ability to capture large numbers of Chukars relatively efficiently. With appropriate modifications this design is applicable for capturing a variety of bird species using small water developments. Chukars (Alectoris chukar) have been introduced throughout …

Mechanisms Of Covalent Self-Assembly Of The Azoarcus Ribozyme From Four Fragment Oligonucleotides, Will E. Draper, Eric John Hayden, Niles Lehman

Chemistry Faculty Publications and Presentations

RNA oligomers of length 40–60 nt can self-assemble into covalent versions of the Azoarcus group I intron ribozyme. This process requires a series of recombination reactions in which the internal guide sequence of a nascent catalytic complex makes specific interactions with a complement triplet, CAU, in the oligomers. However, if the CAU were mutated, promiscuous self-assembly may be possible, lessening the dependence on a particular set of oligomer sequences. Here, we assayed whether oligomers containing mutations in the CAU triplet could still self-construct Azoarcus ribozymes. The mutations CAC, CAG, CUU and GAU all inhibited self-assembly to some degree, but did …

The Tropical Forest And Fire Emissions Experiment: Method Evaluation Of Volatile Organic Compound Emissions Measured By Ptr-Ms, Ftir, And Gc From Tropical Biomass Burning, T. G. Karl, Ted J. Christian, Robert J. Yokelson, Paulo Artaxo, Wei Min Hao, Alex Guenther

Chemistry and Biochemistry Faculty Publications

Volatile Organic Compound (VOC) emissions from fires in tropical forest fuels were quantified using Proton-Transfer-Reaction Mass Spectrometry (PTRMS), Fourier Transform Infrared Spectroscopy (FTIR) and gas chromatography (GC) coupled to PTRMS (GC-PTR-MS). We investigated VOC emissions from 19 controlled laboratory fires at the USFS (United States Forest Service) Fire Sciences Laboratory and 16 fires during an intensive airborne field campaign during the peak of the burning season in Brazil in 2004. The VOC emissions were dominated by oxygenated VOCs (OVOC) (OVOC/NMHC similar to 4:1, NMHC: non-methane hydrocarbons) The specificity of the PTR-MS instrument, which measures the mass to charge ratio of …

2007 Oregon Harvest Report, Oregon Wine Board

Oregon Wine Board Documents

This harvest report for the Oregon wine industry from 2007 explains how, despite weather challenges, farmers and winemakers were able to produce good quality wines with lower alcohol levels. Rains came at an unusual time in the year for the Willamette Valley; in the Applegate, Rogue, and Umpqua Valleys, cooler conditions resulted in less heat stress, producing more balanced fruit and higher yields for growers. The report also includes four-region comparative data prepared by climatologist Dr. Greg Jones.