Life Sciences Commons^™

Similarity Of Climate Change Data For Antarctica And Nevada, Corbin Benally, Shahram Latifi, Karletta Chief

Undergraduate Research Opportunities Program (UROP)

The correlation between temperature and carbon dioxide concentration in the past one hundred years is studied. Separate graphs containing data from Vostok, Antarctica and the Mojave desert/mountain west (Nevada region) are presented. Using data obtained from these graphs, an attempt is made to explain the results and investigate the similarity of these results for Antarctica and Nevada. The importance of this study lies in the fact that if data show the same trend in the two regions, many findings for climate change in Antarctica may readily be validated and employed for Nevada.

The Effects Of The Ground Reaction Force On The Muscle-Tendon Systems About Guinea Pig Joints, Theresa Schill, Kevin Mailland, David V. Lee

Undergraduate Research Opportunities Program (UROP)

Each limb of the limb joints of a quadruped is used differently during locomotion, and it is necessary to recognize the mechanical role each plays. The effects of the ground reaction force on the ankle, knee, and hip joints of Hartley albino guinea pigs were studied in uphill, downhill, and level situations to determine the spring-like capacity of the muscle-tendon systems that act about the limb joints.

Phylogenetic Studies Of Newly Isolated Freshwater Magnetospirilla Using Cbb And Mam Genes, Nathan Viloria, Christopher T. Lefevre, Dennis A. Bazylinski

Undergraduate Research Opportunities Program (UROP)

The phylogeny and general relatedness of prokaryotes is determined by comparisons of the sequences of rRNA genes, most commonly the 16S rRNA gene. Comparisons between other gene sequences have been used for this purpose and some have supported conclusions from 16S rRNA genes while others have not. In this study, 13 new magnetospirilla were phylogenetically characterized using the sequences of the 16S rRNA gene as well as the genes for forms I and II ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) (cbbL and cbbM, respectively) and for two magnetosome membrane proteins unique to magnetotactic bacteria, mamJ and mamK. Polymerase chain reaction (PCR) with degenerate …

Genetically Modifying Arabidopsis Thaliana With A Gene From Drought-Tolerant Xerophyte Larrea Tridentata (Creosote Bush), Norris Lam, Liyuan A. Zhang, Lingkun Gu, Qingxi J. Shen

Undergraduate Research Opportunities Program (UROP)

L. tridentata, or desert creosote bush, is a xerophytic C3 plant native to the American Southwest, and is known to have evolutionarily developed sophisticated cellular mechanisms to deal with periods of intense abiotic stress. Particularly, complex signaling pathways in L. tridentata allow it to survive in periods of severe water deficiency. Through the findings of Zou et al. [5,6], LtWRKY21 synergistically works with abscisic acid (ABA) to transactivate both ABA-inducible HVA1 and HVA22 promoters. In addition, as ABA and gibberellic acid (GA) pathways are known to act antagonistically. Expectantly, the findings of Zou et al. suggest that LtWRKY21 activates ABA …

Antibiotic Resistance In Bacillus Subtilis As Affected By Transcriptional Derepression And The Stringent Response, Brandon Eisinger, Ronald E. Yasbin, Eduardo A. Robleto

Undergraduate Research Opportunities Program (UROP)

Bacterial cells under conditions of starvation or prolonged non-lethal selective pressures accumulate mutations in highly transcribed genes. This process is part of cellular programs to increase genetic diversity in conditions of stress, also known as stationary phase or stress-induced mutagenesis. This experiment investigated mutation frequencies for antibiotic resistance as affected by the stringent response. The stringent response is a global cellular process that initiates at the cessation of growth and mediates changes in gene expression that repress synthesis of ribosome components. We used Bacillus subtilis strains that differ in RelA proficiency. The relA gene controls the synthesis of (p)ppGpp, the …

Examination Of Germination Receptors Of B. Subtilis And B. Megaterium, Shruti Patel, Alessio Luinetti, Ernesto Abel-Santos, Eduardo Robleto

Undergraduate Research Opportunities Program (UROP)

Many bacterial species including those in the Bacilli group form spores as a mechanism to survive harsh conditions such as extreme temperature, radiation, chemicals, and nutrient starvation. By forming spores, they can remain metabolically dormant for an extended period and revert to their vegetative form when environment becomes favorable. This resumption of metabolism and growth is marked by a process called germination that is triggered by exogenous nutrients such as amino acids, sugars, and nucleotides. The (Ger) germination receptors that are postulated to respond to these germinants, in the case of B. subtilis and B. megaterium, are a complex of …

Impact Of Historical Climate Change On The Genetic Structure Of The Great Basin Pocket Mouse, Perognathus Parvus, Ashwitha Francis, Mallory E. Eckstut, Brett R. Riddle

Undergraduate Research Opportunities Program (UROP)

The dynamics of genetic patterns, such as genetic differentiation within and between populations and the geographic distribution of genetic lineages, are often influenced by historical events (such as climatic changes) that have substantially impacted regional biodiversity (the study of phylogeography; Avise, 20001). The magnitude of genetic differentiation among populations is often increased if suitable habitat is reduced, because there is restricted migration among populations. When migration is restricted, the populations may become genetically differentiated from conspecific populations and, over time, may become independent lineages that follow distinctive evolutionary trajectories (Stebbins, 19523; Nevo & Beiles, 19892; Thomas et al., 19984). In …

3d Micro-Mr And Micro-Ct Models For Determining In-Vivo Function In The Guinea Pig Knee Model Of Osteoarthritis (Oa), Kristoffer W. Dean

Undergraduate Research Opportunities Program (UROP)

Osteoarthritis (OA) is a debilitating disease that affects an estimated 27 million adults in the United States. OA causes damage to cartilage in the joints resulting in bones that rub together. This creates pain, swelling, loss of motion of the joint, and bone spurs. As the number of adults above 65 grows (an estimated 72 million people by 2030) even more people will be at high risk for OA. It is the most common type of arthritis by far yet very little is known about it including relationships between joint structure and function. In 2004, the NIH created the Osteoarthritis …

Evaluating Snow Microbial Assemblages, Jenny Lam, Jessica K. Guy, Ryan Brock, Matt Oates, Alison E. Murray

Undergraduate Research Opportunities Program (UROP)

Psychrophiles are organisms that grow optimally below 20C (1). The US Great Basin is home to many mountain peaks with an abundance of alpine snow environments perfect for psychrophilic habitation. We analyzed samples from three different locations, Wheeler Peak, Pacific Crest Trail, and Mount Conness, characterizing and comparing the psychrophilic communities at varying depth intervals in the snow. Polymerase chain reaction (PCR) and denaturing gradient gel electrophoresis (DGGE) showed no notable difference in community structure with depth, but there was a distinct difference when comparing different snow environments (i.e. shaded vs. full sun exposure). The chlorophyll concentration decreased as the …

Evaluation Of Virb Binding Site Contribution To The Regulation Of The Icsp Promoter In Shigella Flexneri, Juan C. Duhart, Maria I. Castellanos, Helen J. Wing

Undergraduate Research Opportunities Program (UROP)

Shigella species are gram-negative, rod-shaped bacteria that are closely related to Escherichia coli. Virulent Shigella spp. are intracellular pathogens that invade, replicate and spread through epithelial cells of the lower intestine and cause bacillary dysentery in humans. This disease is characterized by a robust inflammatory response that results in fever, abdominal pain, and bloody diarrhea (3). According to the CDC, approximately 14,000 cases are reported each year in the United States alone. This number however, does not reflect the actual incidence of this disease as many cases go unreported. The molecular pathogenesis of these bacteria lies in the large virulence …

Effects Of Starvation Selection On Nutrient Allocation And Fecundity In Drosophila Melanogaster, Bryan Penalosa, Allen Gibbs

Undergraduate Research Opportunities Program (UROP)

The life cycle of holometabolous insects is distinctly divided into three life stages: the larval, pupal, and adult stages. During the larval stage, animals accumulate energy stores in the larval fat body to be later used in the pupal and adult stages. I determined how this accumulated energy is stored in adult Drosophila melanogaster that have been selected for resistance to starvation for >40 generations. I assayed carbohydrates, proteins, and lipids and found that 0 day old starvation selected flies have almost four times as much lipid content, twice as much carbohydrate, and a fairly equal amount of protein versus …

Modifying The Amino Acid Sequence In The Surface-Exposed Loops Of The Omptin Family Of Proteins To Determine Their Effect On Function, Natiera Magnuson, Eun-Hae Kim, Christian Ross, Helen J. Wing

Undergraduate Research Opportunities Program (UROP)

The omptin family of proteins consists of proteases which lie in the outer membrane of some gram-negative, pathogenic bacteria such as Escherichia coli (OmpT), Shigella flexneri (IcsP), Salmonella typhimurium (PgtE), and Yersinia pestis (Pla). These proteases are highly conserved, sharing approximately 50% sequence identity and a β-barrel shape (fig. 1D). The differences in the structure of these four proteins are in the surface-exposed loop region surrounding the active site, but not in the active site itself [4]. These proteases are important for the virulence of many bacteria. For example, OmpT of E. coli cleaves an antimicrobial peptide secreted by epithelial …

Ubiquitin Dependent Proteolysis In The Frozen Wood Frog, Michael Ulrich, Ken Storey, Frank Van Breukelen

Undergraduate Research Opportunities Program (UROP)

Wood frogs (Rana sylvatica) freeze during the winter. One might presume that homeostatic processes like protein synthesis and degradation cease during freezing. However, few data are available. In collaboration with Dr. Ken Storey (Carelton University, Canada), we are investigating the primary mode of proteolysis in wood frogs representing different points of the freeze-thaw cycle.

The Small Regulatory Rna Ryhb Regulates Icsa Expression In Shigella Flexneri, Nick Egan, Helen J. Wing

Undergraduate Research Opportunities Program (UROP)

Shigella flexneri is a gram negative non-motile, non-spore forming, rod-shaped bacterium responsible for bacillary dysentery in humans. The master regulator, VirF, initiates a cascade of virulence gene activation by acting as a transcription factor for the gene encoding the global regulator, VirB (1). Production of VirB is also negatively regulated by the regulatory small RNA (sRNA), RyhB 2). Regulatory sRNAs are untranslated RNA molecules involved in the regulation of both transcription and translation. RyhB, a 90 nt sRNA, was first identified in E. coli and subsequently found in all Shigella species. In Shigella this sRNA is maximally expressed in response …

The Endosymbiotic Relationship Of Leguminosae (Fabaceae) And Rhizobium, Sabrina Mcgee, Dolores Maceda, Maria Bustos, Maryknoll Palisoc, Rachel Dahl

Undergraduate Research Opportunities Program (UROP)

This project will look at The Endosymbiotic Relationship of Leguminosae (Fabaceae) and Rizobioum. Endoysmbiosis Theory is the concept that mitochondria and chloroplasts are the result of years of evolution initiated by the endocytosis, (the process by which cells absorb material through their cell membrane) of bacteria and algae which, instead of becoming digested, became symbiotic.The mitochondria of eukaryotes evolved from aerobic bacteria, probably rickettsias, living within their host cell and the chloroplasts from cyanobacteria, also known as blue-green algae. Endoysmbiosis is a type of symbiosis in which one organism lives inside the body of another and both function as a …

Undergraduate Research Opportunities Program 2010, University Of Nevada, Las Vegas

Undergraduate Research Opportunities Program (UROP)

The Undergraduate Research Opportunities Program (UROP) cultivates and supports research partnerships and invites undergraduates to work as the junior colleagues of faculty. The program offers the opportunity to work on cutting edge research—whether you join established research projects or pursue your own ideas. As participants, undergraduates engage in each phase of standard research activity: developing research plans, writing proposals, conducting research, analyzing data. and presenting research results in oral and written form. The projects take place over the summer, and research can be done in any academic department or interdisciplinary laboratory. Projects can last for an entire semester, and many …

Temporal And Spatial Assessment Of Evaporation, Transpiration, And Soil Moisture Redistribution, Brian M. Bird

UNLV Theses, Dissertations, Professional Papers, and Capstones

At a native stand of creosote bush (Larrea tridentata) in North Las Vegas, a rainfall simulation study was conducted over a 12 month period from October 2005 to October 2006. Simulated rainfall occurred during the winter, spring, summer, and fall periods. Rainfall simulation systems were positioned on each of 12 plots, each containing a single creosote bush. Simulated rainfall events occurred at night with multiple short pulses designed to maximize infiltration while minimizing ponding. Yearly simulated rainfall amounts were set at 0, 15, 30 and 60 cm (replicated three times) and were approximately 0, 1.5, 3.0 and 6.0 times the …

Neuropsychological And Emotion Processing Abnormalities In Bipolar Disorder I And Ii, Carol Randall

UNLV Theses, Dissertations, Professional Papers, and Capstones

Bipolar disorder illness is marked by emotional lability and mood disturbance, as well as various neuropsychological deficits, and the neuroanatomical correlates of many of these deficits are beginning to be identified. Numerous studies have implicated specific cortical and sub-cortical abnormalities in areas associated with executive function, memory, motor function, and the processing of emotion. Although a large body of research has been devoted to the investigation of cognitive and emotion-processing deficits in bipolar disorder, relatively few studies have been devoted to the investigation of how these deficits differ among bipolar disorder subtypes. This is surprising in light of known symptomatological …

Transcriptional Regulation Of The Shigella Flexneri Icsp Promoter: Silencing And Anti-Silencing By H-Ns And Virb, Dustin Harrison

UNLV Theses, Dissertations, Professional Papers, and Capstones

Shigella species are gram-negative intracellular pathogens that cause bacillary dysentery in humans. Many genes required for virulence of Shigella are carried on a large 230 kb plasmid and many of these are under the transcriptional control of the histone-like nucleoid structuring protein (H-NS) and by the major virulence regulator VirB. At the non-permissive temperature of 30⁰C, H-NS represses transcription, while at 37⁰C VirB alleviates this repression. This mechanism of gene regulation has been coined "silencing/anti-silencing" and is commonly found in many important bacterial pathogens including Salmonella spp. and Yersinia spp. The icsP gene, encoded by the Shigella virulence plasmid, is …

The Effect Of Self-Efficacy Manipulation On The Efficiency, Rate Of Perceived Exertion, And Affective State Of Runners, Isabelle Stoate

UNLV Theses, Dissertations, Professional Papers, and Capstones

Objectives: To determine the effect of self-efficacy manipulation on the movement efficiency, rate of perceived exertion (RPE), and affective state of runners while running on the treadmill at a constant submaximal pace.

Methods: 20 trained male and female runners were randomly assigned to experimental (self-efficacy manipulation) and control groups. Participants first filled out a pre self-efficacy questionnaire and the positive affect negative affect schedule (PANAS), and then completed a 20 minute run on the treadmill running at 75% of their peak treadmill running speed. After 10 minutes, their oxygen consumption (VO2), heart rate (HR), and RPE was recorded. Participants (n=10) …

Presenilin Is Necessary For The Function Of Cbp In The Adult Drosophila Cns, Randy S. Boyles

UNLV Theses, Dissertations, Professional Papers, and Capstones

Dominant mutations in Presenilin (Psn) have been correlated with the formation of Aß- containing plaques in patients with inherited forms of Alzheimer's disease (AD). However, a clear mechanism directly linking amyloid plaques to the pathology of familial or sporadic forms of AD has remained elusive. Thus, recent discoveries of several new substrates for Psn protease activity have sparked alternative hypotheses to explain the preclinical symptoms of AD. CBP (CREB-binding protein) is a haplo- insufficient transcriptional co-activator with histone acetyltransferase (HAT) activity that has been proposed to be a downstream target for Psn signaling. Individuals with reduced CBP levels have cognitive …

The Larval Salivary Gland Of Drosophila Melangogaster: A Model System For Temporal And Spatial Steroid Hormone Regulation, Benjamin Constantino

UNLV Theses, Dissertations, Professional Papers, and Capstones

Drosophila melanogaster provides an ideal model organism to test genetic and molecular biological mechanisms within the context of a living animal. For over one hundred years Drosophila continues to produce a boundless extent of informative and important scientific data providing crucial insight into development, disease progression and genetic interactions. A century as a model organism allowed for the development of an abundance of unique genetic and molecular tools allowing researchers to tease apart cellular mechanisms with very little limitation. From the whole adult body to tissue function to molecular networks, if a biological question arises it most likely can be …

Evaluating Efficacy Of Restoration Techniques, Keys View Road Reconstruction, Joshua Tree National Park, California, U.S.A, Scott R. Abella, E. Cayenne Engel

Public Policy and Leadership Faculty Research

Keys View Road in Joshua Tree National Park (JOTR) was recently repaved, resulting in a buffer of vegetation and soil disturbance along the road corridor. In order to mitigate the effects of the repaving, JOTR designed an experimental framework to test various revegetation strategies. They outplanted salvaged and nursery grown native plant species in conjunction with vertical mulch in a fully crossed design (outplanting only, vertical mulch only, outplanting + vertical mulch, bare ground) to examine if any of the treatments most efficiently establish native plant communities.

Survey Of Resource Managers Completed On Monitoring And Management Actions For Rare Plants In Arizona And Nevada, Scott R. Abella

Public Policy and Leadership Faculty Research

In a collaborative project with Northern Arizona University and more than 35 resource managers in Arizona and Nevada, we completed a survey of monitoring and management activities that are ongoing in these states for conserving populations of rare plants. We sent questionnaires consisting of 16 questions to as many resource managers as possible in these states and had follow-up conversations with several managers willing to share their perspective on ongoing conservation actions. The findings may be interesting for managers to see what issues and management strategies other managers in the same or different regions are grappling with. Results will be …

Mojave Applied Ecology Notes Summer 2010, Scott R. Abella, E. Cayenne Engel

Mojave Applied Ecology Notes

Survey of monitoring and management for conservation of rare plants, Roadside restoration techniques in Joshua Tree NP, and an update on renewable energy developments in the Southwestern deserts

Renewable Energy Projects In Southwestern Deserts – Update On Our Involvement, Scott R. Abella

Public Policy and Leadership Faculty Research

Like many in the conservation field, we have a good understanding of the urgent need for alternative energy sources, but also of the negative environmental tradeoffs of placing renewable energy developments on vast tracts of public lands in southwestern deserts as currently envisioned. We also understand political and economic reasons, good or bad, for not doing some obvious things that make sense for renewable energy like placing solar arrays on building tops in cities, within multi-use contexts such as crops, and on already impacted land when alternative energy projects (right or wrong) are to be placed on public land.

Comparison Of Body Composition Between Physically Active And Inactive Wheelchair Users, Masaru Teramoto

UNLV Theses, Dissertations, Professional Papers, and Capstones

The purpose of this study was to examine the association between regular physical activity and body composition in individuals with physical disabilities. The study was designed to compare body composition parameters between wheelchair users participating in adapted sports programs and those being physically inactive. Male wheelchair users were recruited and classified based on physical activity level (active or inactive) and disability type (paraplegic or quadriplegic). Regional and whole-body percent body fat (%BF), lean body mass (LBM), and bone mineral density (BMD) were assessed by dual-energy X-ray absorptiometry. These variables were then compared among the groups using a two-way between-groups multivariate …

Joint Fire Science Program – Lake Mead National Recreation Area Revegetating Burned Arid Lands: Identifying Successful Native Species Using Trait And Competition Analysis: Quarterly Progress Report, Time Period: May 1 — June 30, 2010, Margaret N. Rees

Fire Science

• Article entitled “Competitive Hierarchy of Native Desert Plants with Red Brome (Bromus rubens): Towards Identifying Invasion-Reducing Species" was submitted to the Invasive Plant Science and Management journal.
• Maintained nursery plots and added installment of nitrogen treatment.
• Took measurements in nursery (competition) plots and harvested biomass.

Lake Mead National Recreation Area Monitoring And Evaluation Of Sensitive Wildlife: Quartlerly Progress Report, Period Ending June 30, 2010, Margaret N. Rees

Wildlife Monitoring

Project 1. Relict Leopard Frog Monitoring, Management, and Research

• All milestones and deliverables are on schedule
• Translocation program completed for this year
• Completed spring-season nocturnal monitoring surveys
• Completed spring-season mark-recapture efforts at Blue Point Spring
• Hosted RLFCT meeting

Project 2. Bald Eagle Winter Monitoring and Evaluation

• This project has been completed and all associated deliverables have been met

Project 3. Peregrine Falcon Monitoring and Evaluation

• This project has been completed and all final report deliverables have been met
• Although not specified in the scope of work for this project, call-broadcast surveys were conducted this quarter to provide a limited assessment …

Limnological Assistance For Lake Mead National Recreation Area: Quarterly Report, Period Ending June 30, 2010, Margaret N. Rees

Limnological Studies

Project 1

• Technical assistance with the implementation of the Interagency Monitoring Action Plan (I-MAP) for Quagga Mussels is ongoing. During this quarter, analysis was completed for 14 adult/juvenile samples from the fall 2009 – spring 2010 sampling.
• Sampling for the first of two small-scale research projects funded by this task agreement (Abundance and settlement at different depths of Lake Mead) was initiated on June 16, 2010.

Project 2

• Topics and proposed analyses have been drafted for annual report development as prescribed by the Plan.
• A plan for developing and organizing NPS limnology-related web pages has been documented and content has …