Life Sciences Commons^™

Ecological Repentance, Emmanuel Salem

Williams Honors College, Honors Research Projects

In an age ripe with discovery and analysis regarding anthropogenic pollution and the resultant climate change, a causal ideological explanation is naturally sought. This paper seeks to delve deep into the Christian religion and its relationship to the current climate crisis, as well as discuss whether or not predictions and speculative assertions professed in the famous essay by Lynn White, Historical Roots of our Ecological Crisis, hold up when surveyed with a more critical and thorough evaluative lens. This conversation is undertaken under three core considerations: biblical cosmology, what has happened in the world of Christian bioethics since White’s time, …

Accessibility: Disabilities Treasure Hunt, Devorah Kletenik

Open Educational Resources

This is a treasure hunt game that simulates various disabilities and gives a sense of how frustrating non-accessible content can be for people with disabilities. Suitable for a general audience, no programming experience necessary.

An editable copy is also given, along with ideas about how to make it more accessible.

Supporting Data - Recycling Of Nitrate And Organic Matter By Plants In The Vadose Zone Of A Saturated Riparian Buffer, Patience Bosompemaa, Eric Wade Peterson, William Perry, Wondwosen M. Seyoum

Faculty Publications - Geography, Geology, and the Environment

Data from the analysis of nitrate as nitrogen in the soil and soil pore water within the vadose zone of a saturated riparian buffer (SRB). Additional properties measured include: Organic matter (as %), bulk density, moisture content, and porosity. Soil samples were collected pre-growing season (n=57) and post-growing season from two plots (n=29): vegetated plots and barren plots. Statistical comparison of among the treatments, Pre-growing season, plot with plants, and barren plot, and among the different depths, 30 cm, 60 cm, and 90 cm identified significantly different soil NO₃^--N concentrations. Plots with plants experienced a reduction in …

The Importance Of Store Hygiene For Reducing Post-Harvest Losses In Smallholder Farmers’ Stores: Evidence From A Maize-Based Farming System In Kenya, Kobia J. Makinya, John M. Wagacha, Judith A. Odhiambo, Paddy Likhayo, Kukom Edoh-Ognakossan, Tadele Tefera, Adebayo Abass, Christopher M. Mutungi

All Peer-Reviewed Publications

Knowledge of the role of hygiene in reducing food loss in farm stores is limited among extensionists, researchers, and farmers. Store hygiene practices during post-harvest handling and storage of maize were assessed using a cross-sectional survey of 342 farmers, with regular follow-up of 40 farmers’ stores over seven months to measure losses caused by insects, and to score the hygiene levels using a standard checklist. Fractional Response Model was used to evaluate the associations between hygiene practices and the losses. Farmers stored their produce in sacks (98.2%) kept in outside granaries (60.1%), or rooms in dwelling houses (39.9%). Co-storage with …

Assessing And Understanding Non-Responsiveness Of Maize And Soybean To Fertilizer Applications In African Smallholder Farms, Dries Roobroeck, Cheryl A. Palm, Generose Nziguheba, Ray Weil, Bernard Vanlauwe

All Peer-Reviewed Publications

Use of mineral fertilizers is essential to enhance crop productivity in smallholder farming systems of Sub-Saharan Africa, but various studies have reported ‘non-responsiveness’ where application of inorganic fertilizers does not lead to satisfactory yield gains. This phenomenon is not well defined nor are its extent and causes well understood. In order to close these knowledge gaps, we assessed the effects of commonly recommended nitrogen (N), phosphorus (P) and/or potassium (K) fertilizer inputs on maize grain and soybean production on farmer fields across prevalent land slope and/or soil texture gradients (2 × 2 matrix) in four agroecosystems over two growing seasons. …

Tsetse Blood-Meal Sources, Endosymbionts And Trypanosome-Associations In The Maasai Mara National Reserve, A Wildlife-Human-Livestock Interface, Edward Edmond Makhulu, Jandouwe Villinger, Vincent Owino Adunga, Maamun M. Jeneby, Edwin Murungi Kimathi, Enock Mararo, Joseph Wang’Ang’A Oundo, Ali Abdulahi Musa, Lillian Wambua

All Peer-Reviewed Publications

African trypanosomiasis (AT) is a neglected disease of both humans and animals caused by Trypanosoma parasites, which are transmitted by obligate hematophagous tsetse flies (Glossina spp.). Knowledge on tsetse fly vertebrate hosts and the influence of tsetse endo-symbionts on trypanosome presence, especially in wildlife-human-livestock interfaces, is limited. We identified tsetse species, their blood-meal sources, and correlations between endosymbionts and trypanosome presence in tsetse flies from the trypanosome-endemic Maasai Mara National Reserve (MMNR) in Kenya. Among 1167 tsetse flies (1136 Glossina pallidipes, 31 Glossina swynnertoni) collected from 10 sampling sites, 28 (2.4%) were positive by PCR for trypanosome DNA, most (17/28) …

Cannibalism, Oviposition And Egg Development In The Edible Long-Horned Grasshopper, Ruspolia Differens (Orthoptera: Tettigoniidae) Under Laboratory Conditions, J. P. Egonyu, M. M. Miti, C. M. Tanga, A. Leonard, S. Subramanian

All Peer-Reviewed Publications

Reliance on seasonal wild harvests of the edible long-horned grasshopper Ruspolia differens (Serville) (Orthoptera: Tettigoniidae) needs to be broken through developing efficient mass rearing protocols. This study aimed at boosting productivity of laboratory colonies of R. differens through understanding ways of minimising cannibalism, selecting suitable oviposition substrates and enhancing egg development and hatchability. Firstly, we investigated the extent of cannibalism in a colony of R. differens relative to total mortality, sex, diurnality, growth stage, body parts eaten and visual barriers (presence/absence of cardboard egg trays). R. differens cadavers recovered from cages with/without the egg trays were scored for cause of …

Effects Of Rhizobia And Arbuscular Mycorrhizal Fungi On Yield, Size Distribution And Fatty Acid Of Soybean Seeds Grown Under Drought Stress, Nicholas O. Igiehon, Olubukola O. Babalola, Xavier Cheseto, Baldwyn Torto

All Peer-Reviewed Publications

Soybean (Glycine max L.) is among the most economically important legumes that provide more than 1/4 of food (for man) and animal feed. However, its yield is comparatively low, most especially under drought stress. The aim of this study therefore was to assess the ability of Rhizobium spp. and mycorrhizal fungi to enhance the yield, seed size and fatty acid content of soybean grown under semi-arid environment. Rhizobium sp. strain R1 was found to possess nitrogen-fixing gene coniferyl aldehyde dehydrogenase function while Rhizobium cellulosilyticum strain R3 was found to have nitrogen-fixing genes cysteine desulfurase SufS and cysteine desulfurase IscS activity. …

Effect Of Zebra Skin-Derived Compounds On Field Catches Of The Human African Trypanosomiasis Vector Glossina Fuscipes Fuscipes, Olabimpe Y. Olaide, David P. Tchouassi, Abdullahi A. Yusuf, Christian W.W. Pirk, Daniel K. Masiga, Rajinder K. Saini, Baldwyn Torto

All Peer-Reviewed Publications

The riverine tsetse fly Glossina fuscipes fuscipes is a major vector of trypanosome pathogens causing African trypanosomiasis. This fly species uses a combination of olfactory and visual cues to locate its hosts. Previously, traps and targets baited with visual cues have been used in vector control, but the development of olfactory-based tools has been challenging. Recently, repellents have shown promise as olfactory-based tools in tsetse vector control. Here, we evaluated a three-component blend comprising 6-methyl-5-hepten-2-one, acetophenone and geranyl acetone (blend K), previously identified as a repellent for savannah tsetse flies in zebra skin odor, on G. f. fuscipes populations. Using …

The Tijeras Pueblo (La 581) Archaeofaunal Project, Emily Lena Jones, Scott Kirk, Caitlin S. Ainsworth, Asia Alsgaard, Jana Valesca Meyer, Cyler Conrad

Anthropology Datasets

These files contain data generated by the Tijeras Pueblo (LA 581) Archaeofaunal Project, a project of the University of New Mexico Department of Anthropology Zooarchaeology Laboratory between 2011 and the present. This project has been supported in part by the National Science Foundation under Grant No. 1732622 and by a grant from the Research Allocations Committee of the University of New Mexico.

These data are the basis of the analyses presented in the following publication:

Jones, Emily Lena, Scott Kirk, Caitlin S. Ainsworth, Asia Alsgaard, Jana Valesca Meyer, and Cyler Conrad. 2021. The Community at the Crossroads: Artiodactyl Exploitation and …

Sars-Cov-2 Exposure In Wild White-Tailed Deer (Odocoileus Virginianus), Jeffrey C. Chandler, Sarah N. Bevins, Jeremy W. Ellis, Timothy J. Linder, Rachel M. Tell, Melinda Jenkins-Moore, J. Jeffrey Root, Julianna B. Lenoch, Suelee Robbe-Austerman, Thomas J. Deliberto, Tom Gidlewski, Mia Kim Torchetti, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Widespread human SARS-CoV-2 infections combined with human–wildlife interactions create the potential for reverse zoonosis from humans to wildlife. We targeted white-tailed deer (Odocoileus virginianus) for serosurveillance based on evidence these deer have angiotensin-converting enzyme 2 receptors with high affinity for SARS-CoV-2, are permissive to infection, exhibit sustained viral shedding, can transmit to conspecifics, exhibit social behavior, and can be abundant near urban centers. We evaluated 624 prepandemic and postpandemic serum samples from wild deer from four US states for SARS-CoV-2 exposure. Antibodies were detected in 152 samples (40%) from 2021 using a surrogate virus neutralization test. A subset of samples …

Smokejumper Obituary: Cummings#1, Harry Lee (Missoula 1946), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.

Genomic Adaptations And Evolutionary History Of The Extinct Scimitar-Toothed Cat, Homotherium Latidens, Ross Barnett, Michael V. Westbury, Marcela Sandoval-Velasco, Filipe Garrett Vieira, Sungwon Jeon, Grant Zazula, Michael D. Martin, Simon Y.W. Ho, Niklas Mather, Shyam Gopalakrishnan, Jazmín Ramos-Madrigal, Marc De Manuel, M. Lisandra Zepeda-Mendoza, Agostinho Antunes, Aldo Carmona Baez, Binia De Cahsan, Greger Larson, Stephen J. O'Brien, Eduardo Eizirik, Warren E. Johnson, Klaus Peter Koepfli, Andreas Wilting, Jörns Fickel, Love Dalén, Eline D. Lorenzen, Tomas Marques-Bonet, Anders J. Hansen, Guojie Zhang, Jong Bhak

Biology Faculty Articles

Homotherium was a genus of large-bodied scimitar-toothed cats, morphologically distinct from any extant felid species, that went extinct at the end of the Pleistocene [1–4]. They possessed large, saber-form serrated canine teeth, powerful forelimbs, a sloping back, and an enlarged optic bulb, all of which were key characteristics for predation on Pleistocene megafauna [5]. Previous mitochondrial DNA phylogenies suggested that it was a highly divergent sister lineage to all extant cat species [6–8]. However, mitochondrial phylogenies can be misled by hybridization [9], incomplete lineage sorting (ILS), or sex-biased dispersal patterns [10], which might be especially relevant for Homotherium since widespread …

Effects Of Agricultural Intensification Practices On Smallholder Farmers’ Livelihood Outcomes In Kenyan Hotspots Of Climate Change, F. O. Ouya, O. I. Ayuya, M. I. Kariuki

All Peer-Reviewed Publications

Developing countries, Kenya included are mostly affected by food shortage and poverty as a result of high dependence on agriculture constrained by climate variability, declining land sizes and low agricultural technologies. Agricultural intensification is key in solving these problems to ensure increased farm output per unit land area. This study analyzed the role of agricultural intensification on smallholders’ poverty and food security status. The study is based on data collected from a sample of 320 smallholder households from two Sub-counties of Kenya, Makueni and Nyando. Principle Component Analysis (PCA) was first used to group agricultural intensification practices into clusters. The …

The Fear Of Reptiles And How To Change It, Maxwell Lyman

Honors Projects

Reptile fear is prominent across many cultures. Anti-reptilian attitudes can lead to anti-conservation attitudes towards reptiles. Person-animal interaction has been shown to decrease fear desensitization and increase positive attitudes towards "unpopular" animals. My project demonstrates the effectiveness of live animal presentation in dispelling negative attitudes of reptiles. However, due to the sample size of the project, further research is highly suggested.

Using Structural Equation Modeling To Model Compliance With Covid-19 Related Non-Pharmaceutical Interventions Amongst University Students In The United States, Spencer G. Shumway, Jonas D. Hopper, Ethan R. Tolman, Daniel G. Ferguson, Gabriella Hubble, David Patterson, Jamie Jensen

ScholarsArchive Data

There are two data files. The "General Data" comes from a nationwide poll using Qualtrics polling software. The "Utah Data" comes from undergraduate biology students at UVU and BYU. The survey gathered demographic data and attitudes toward the COVID pandemic.

Genome Wide Association Analysis Of A Stemborer Egg Induced “Call-For-Help” Defence Trait In Maize, Amanuel Tamiru, Rajneesh Paliwal, Samuel J. Manthi, Damaris A. Odeny, Charles A.O. Midega, Zeyaur R. Khan, John A. Pickett, Toby J.A. Bruce

All Peer-Reviewed Publications

Tritrophic interactions allow plants to recruit natural enemies for protection against herbivory. Here we investigated genetic variability in induced responses to stemborer egg-laying in maize Zea mays (L.) (Poaceae). We conducted a genome wide association study (GWAS) of 146 maize genotypes comprising of landraces, inbred lines and commercial hybrids. Plants were phenotyped in bioassays measuring parasitic wasp Cotesia sesamiae (Cameron) (Hymenoptera: Braconidae) attraction to volatiles collected from plants exposed to stemborer Chilo partellus (Swinhoe) (Lepidoptera: Crambidae) eggs. Genotyping-by-sequencing was used to generate maize germplasm SNP data for GWAS. The egg-induced parasitoid attraction trait was more common in landraces than in …

Insect Chemical Ecology: Chemically Mediated Interactions And Novel Applications In Agriculture, Crispus M. Mbaluto, Pascal M. Ayelo, Alexandra G. Duffy, Anna L. Erdei, Anaїs K. Tallon, Siyang Xia, Gabriela Caballero-Vidal, Urban Spitaler, Magdolna O. Szelényi, Gonçalo A. Duarte, William B. Walker, Paul G. Becher

All Peer-Reviewed Publications

Insect chemical ecology (ICE) evolved as a discipline concerned with plant–insect interactions, and also with a strong focus on intraspecific pheromone-mediated communication. Progress in this field has rendered a more complete picture of how insects exploit chemical information in their surroundings in order to survive and navigate their world successfully. Simultaneously, this progress has prompted new research questions about the evolution of insect chemosensation and related ecological adaptations, molecular mechanisms that mediate commonly observed behaviors, and the consequences of chemically mediated interactions in different ecosystems. Themed meetings, workshops, and summer schools are ideal platforms for discussing scientific advancements as well …

Citronellal Perception And Transmission By Anopheles Gambiae S.S. (Diptera: Culicidae) Females, Weijian Wu, Shanshan Li, Min Yang, Yongwen Lin, Kaibin Zheng, Komivi Senyo Akutse

All Peer-Reviewed Publications

Anopheles gambiae s.s. is a key vector of Plasmodium parasites. Repellents, which may be a promising alternative to pesticides used to control malaria mosquitoes. Although citronellal is a known mosquito repellent, its repellency characteristics are largely unknown. Determining the specific odorant-binding proteins (OBPs) and odorant receptors (ORs) that detect and transfer the citronellal molecule in A. gambiae s.s. will help to define the mode of action of this compound. In this research, we assessed the repellent activity of citronellal in A. gambiae s.s. using a Y-tube olfactory meter, screened candidate citronellal-binding OBPs and ORs using reverse molecular docking, clarified the …

False Codling Moth, Thaumatotibia Leucotreta (Meyrick) A New Threat To Horticulture Industry: Stakeholders’ Perspectives On The Status, Impact And Management In Kenya, Daniel M. Mutyambai, Nyang’Au I. Mbeche, Emmanuel Onamu, Muo J. Kasina, John H. Nderitu, Allan N. Mweke

All Peer-Reviewed Publications

False codling moth (FCM) has emerged as a major constraint to the production of horticultural crops in Kenya and is currently the leading cause of interceptions of Capsicum and cut flowers exported to European Union. Use of pesticides to control this pest is not only unsustainable, uneconomical but also contributes to interceptions of export produce due to higher levels of pesticide residues in the produce. Further, due to cryptic nature of feeding by the pest, pesticides often do not result to efficient control. Growing crops under protected areas though effective is not affordable to smallholder resource poor farmers necessitating search …

A Microsporidian Impairs Plasmodium Falciparum Transmission In Anopheles Arabiensis Mosquitoes, Jeremy K. Herren, Lilian Mbaisi, Enock Mararo, Edward E. Makhulu, Victor A. Mobegi, Hellen Butungi, Maria Vittoria Mancini, Joseph W. Oundo, Evan T. Teal, Silvain Pinaud, Mara K.N. Lawniczak, Jordan Jabara, Godfrey Nattoh, Steven P. Sinkins

All Peer-Reviewed Publications

A possible malaria control approach involves the dissemination in mosquitoes of inherited symbiotic microbes to block Plasmodium transmission. However, in the Anopheles gambiae complex, the primary African vectors of malaria, there are limited reports of inherited symbionts that impair transmission. We show that a vertically transmitted microsporidian symbiont (Microsporidia MB) in the An. gambiae complex can impair Plasmodium transmission. Microsporidia MB is present at moderate prevalence in geographically dispersed populations of An. arabiensis in Kenya, localized to the mosquito midgut and ovaries, and is not associated with significant reductions in adult host fecundity or survival. Field-collected Microsporidia MB infected An. …

Characterization Of Mycotoxins From Entomopathogenic Fungi (Cordyceps Fumosorosea) And Their Toxic Effects To The Development Of Asian Citrus Psyllid Reared On Healthy And Diseased Citrus Plants, Muhammad Qasim, Saif Ul Islam, Waqar Islam, Ali Noman, Khalid Ali Khan, Muhammad Hafeez, Dilbar Hussain, Chandra Kanta Dash, Bamisope Steve Bamisile, Komivi Senyo Akutse, Muhammad Rizwan, Muhammad Shahid Nisar, Saad Jan, Liande Wang

All Peer-Reviewed Publications

Entomopathogenic fungi (EPF) produce multiple mycotoxins, which play an essential role in improving fungal pathogenesis and virulence. To characterize various mycotoxins from the crude methanol extract of Cordyceps fumosorosea, a major EPF against various insect pests, we performed ultra-performance liquid chromatography coupled to quadrupole time of flight mass spectrometer (UPLC-QTOF MS) technique, and all compounds were identified through molecular mass and formulae. Bassianolide was assessed against the nymphs and adults of Diaphorina citri reared on healthy and Huánglóngbìng (HLB)-diseased Citrus spp. Plants under laboratory conditions. Overall, 17 compounds were identified from the fungal extract and categorized into three groups, i.e. …

Reconciling Yield Gains In Agronomic Trials With Returns Under African Smallholder Conditions, Rachid Laajaj, Karen Macours, Cargele Masso, Moses Thuita, Bernard Vanlauwe

All Peer-Reviewed Publications

Increased adoption of improved agricultural technologies is considered an essential step to address global poverty and hunger, and agronomic trials suggest intensification in developing countries could result in large yield gains. Yet the promise of new technologies does not always carry over from trials to real-life conditions, and diffusion of many technologies remains limited. We show how parcel and farmer selection, together with behavioural responses in agronomic trials, can explain why yield gain estimates from trials may differ from the yield gains of smallholders using the same inputs under real-life conditions. We provide quantitative evidence by exploiting variation in farmer …

Mitochondrial Genetic Variation Reveals Phylogeographic Structure And Cryptic Diversity In Trioza Erytreae, Inusa Ajene, Gerhard Pietersen, Barbara Van Asch

All Peer-Reviewed Publications

Trioza erytreae is the main vector for ‘Candidatus Liberibacter africanus’, the causative agent of African Citrus Greening disease. The insect is widespread in Africa, and has recently disseminated to Southwestern Europe. This study aimed at generating reference mitogenome sequences for T. erytreae, as a background for future genetic diversity surveys. Complete mitochondrial sequences of three specimens collected in Ethiopia, Uganda and South Africa were recovered using Ion Torrent technology. The mitogenomes of T. erytreae from Uganda and Ethiopia were highly similar, and distinct from that found in South Africa. The phylogeographic structure of T. erytreae was assessed using genetic clustering …

Bullseye Snakehead Fish (Channa Marulius) Neurocranium, James A. Moss, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium had an estimated length of 11 cm, Bullseye Snakehead (Channa marulius), invasive species collected from South Florida

Gamified Text Messaging Contingent On Device-Measured Steps: Randomized Feasibility Study Of A Physical Activity Intervention For Cancer Survivors, Michael C. Robertson, Elizabeth J. Lyons, Yue Liao, Miranda L. Baum, Karen M. Basen-Engquist

Kinesiology Faculty Publications & Presentations - Archive

Background: Physical activity can confer diverse benefits on cancer survivors. Unfortunately, many cancer survivors are not sufficiently active. The efficacy of physical activity interventions for this population may be increased by grounding them in Self-Determination Theory (SDT). Combining game design elements with wearable technologies may be a useful and scalable approach to targeting SDT constructs to promote cancer survivors’ physical activity. Objective: The primary aim of this study is to evaluate the feasibility and acceptability of Steps2Health, a physical activity intervention for cancer survivors. It also aims to investigate the effects of the intervention on motivation, physical activity, and step …

[Silk Snapper, Lutjanus Vivanus] Neurocranium, Rachel Taylor, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Silk snapper, Lutjanus vivanus, apart of the Lutjanidae family. A species of red snapper commonly found in the Atlantic and Gulf of Mexico.

Neurocranium prep submission for Dr. Kertstetter, MBIO 3700 Biology of Fishes

Atlantic Mackerel (Scomber Scombrus) Neurocranium, Victor A. Reyes, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Atlantic Mackerel (Scomber scombrus), collected on 12/9/20 by Victor Reyes

Wahoo (Acanthocybium Solandri) Neurocranium, Emily M. Salonia, Mariah Medina, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 18.8 cm total length (TL) Wahoo (Acanthocybium solandri) collected from Dr. Kerstetter's Fisheries and Avian Ecology Laboratory at Nova Southeastern University Oceanographic Center on 31/8/20 by Emily Salonia.

Queen Snapper(Etelis Oculatus), Katelyn Digirolomo, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 10.5cm total length(TL) of a Queen Snapper, Etelis oculatus. Collected from Lee Be Fish in Naples Florida on September 12th 2020 by Katelyn DiGirolomo.