Biomechanical Engineering Commons^™

Dna/Carbon Nanotube Hybrid Structure And Their Translocation Through A Nanochannel, Daniel Christoffel Viljoen

Graduate Theses and Dissertations

DNA sequencing is of major importance as it is used in fields such as species differentiation, personalized medicine and food safety. Currently sequencing by synthesis is the most popular commercial method of sequencing DNA while Oxford nanopore’s protein based nanopores are the only portable commercial method. Current nanopore based devices have three main issues: Spacial resolution, translocation rate versus sensor strength and dealing with the persistence length of ssDNA. This thesis contributes to ongoing research that aims to create a nanochannel with integrated sensor based sequencing device. The project has two main objectives. The first objective is to improve the …

Respiratory Compensated Robot For Liver Cancer Treatment: Design, Fabrication, And Benchtop Characterization, Mishek Jair Musa

Graduate Theses and Dissertations

Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related death in the world. Radiofrequency ablation (RFA) is an effective method for treating tumors less than 5 cm. However, manually placing the RFA needle at the site of the tumor is challenging due to the complicated respiratory induced motion of the liver. This paper presents the design, fabrication, and benchtop characterization of a patient mounted, respiratory compensated robotic needle insertion platform to perform percutaneous needle interventions. The robotic platform consists of a 4-DoF dual-stage cartesian platform used to control the pose of a 1-DoF needle insertion module. The active …

Influence Of Extracellular Matrix Stiffness And Topography On Neuronal Cell Behavior And Neurite Outgrowth, Mohan Yasodharababu

Graduate Theses and Dissertations

The focus of regeneration therapy for traumatic brain injuries and Alzheimer's disease is on the promotion and growth of neuronal cells. In vitro research attempts to improve this by modifying the stiffness and topography of the extracellular matrix (ECM). However, the limitations of in vitro experiments make it difficult to control the individual factors influencing neuronal cell growth. A computational model can be used to decouple individual factors and study them individually to gain a better understanding of the mechanics between the neuronal cell and ECM, which will aid in the design of in vitro experimental studies.

This study develops …

A Numerical Investigation Of Bio-Inspired Scaffolds And Surface Textures, Yucong Gu

Graduate Theses and Dissertations

Synthetic scaffolds are widely used as implants to repair bone fracture. Without a proper design, scaffolds could pose significant health risks to the patient and fail to heal the bone properly. A good synthetic scaffold needs to have high porosity and large pore size to allow new bone cells to form on it. However, a scaffold with higher porosity and larger pore size tends to have reduced mechanical strength. Thus, it is important to find a structural design which allows the implant to have a high porosity and large pore size while retaining high strength. In this research, a 3D-printable …

Effects Of Hydration And Mineralization On The Mechanical Behavior Of Collagen Fibrils, Marco Fielder

Graduate Theses and Dissertations

Bone is a composite biomaterial with a structural load-bearing function. Understanding the biomechanics of bone is important for characterizing factors such as age, trauma, or disease, and in the development of scaffolds for tissue engineering and bioinspired materials. At the nanoscale, bone is primarily composed of collagen protein, apatite crystals, and water. Though several studies have characterized nanoscale bone mechanics as the mineral content changes, the effect of water, mineral, and carbon nanotube (CNT) content and distribution in fibril gap and overlap regions is unexplored. This study used molecular dynamics to investigate the change in collagen fibril deformation mechanisms as …

Development Of A Design Tool For Biologically Inspired Fault Adaptive Design By Strategy Mapping, Nicholas Steven Huisman

Graduate Theses and Dissertations

A design tool for Biologically Inspired Fault Adaption that utilizes the concept of strategy mapping was developed and the development process and testing is presented in this paper. The concept of strategy mapping is derived primarily from the field of military theory and supposes that for any given specific problem, that there exists a specific solution for, a single strategy can be identified for that solution/problem combination. This strategy, when applied to the specific problem yields the specific solution. This specific solution is referred to as the “tactics” of the strategy. The strategy can also be directly applied to a …

Development Of A Pdms Based Micro Total Analysis System For Rapid Biomolecule Detection, Balaji Srinivasan Venkatesh

Graduate Theses and Dissertations

The emerging field of micro total analysis system powered by microfluidics is expected to revolutionize miniaturization and automation for point-of-care-testing systems which require quick, efficient and reproducible results. In the present study, a PDMS based micro total analysis system has been developed for rapid, multi-purpose, impedance based detection of biomolecules. The major components of the micro total analysis system include a micropump, micromixer, magnetic separator and interdigitated electrodes for impedance detection. Three designs of pneumatically actuated PDMS based micropumps were fabricated and tested. Based on the performance test results, one of the micropumps was selected for integration. The experimental results …