Biochemical and Biomolecular Engineering Commons^™

Optofluidic Glucose Sensor Utilizing An Epoxy-Based, Transparent Dry Film Resist, Zhan Gao, Sijia Gong, Chang Soo Kim, David B. Henthorn

Electrical and Computer Engineering Faculty Research & Creative Works

An enzymatic, fluorescent glucose sensor was constructed with a novel epoxy-Based, optically transparent dry film resist (PerMX 3000 series, DuPont). This material was utilized as the main active material for fluidic structure and optical interrogation. This sensor was based on the enzymatic reaction of glucose oxidase (GOD) and utilized a ruthenium complex fluorophore as the reporting agent. Both the oxygen-sensitive ruthenium complex and GOD were incorporated into poly (ethylene glycol) (PEG)-Based hydrogel materials, which were lithographically patterned and embedded inside the PerMX fluidic channel after wafer-bonding process. the optofluidic sensing platform with this embedded sensing elements exhibited a wide dynamic …

Comparison Of Microwave And Conventionally Sintered Yttria-Doped Zirconia Ceramics, Colin J. Reidy, Thomas J. Fleming, Stuart Hampshire, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

This paper reports on improvement of the physical and mechanical properties of Y₂O₃-ZrO₂ ceramics through compositional optimization, the use of nanograined powders and utilization of microwave sintering. ZrO₂ with 2-5 mol% Y₂O₃, prepared from nanopowders, was sintered in both conventional and microwave furnaces under exactly the same heating schedule. It was found that microwave sintering improves physical and mechanical properties of Y₂O₃-ZrO₂ ceramics compared with conventional sintering. Compositions containing 2 mol% Y₂O₃ exhibit the greatest improvement due to retention of tetragonal ZrO …

Polymorphic Structures Of Alzheimer's Beta-Amyloid Globulomers, Jie Zheng

Chemical, Biomolecular, and Corrosion Engineering Faculty Research

Misfolding and self-assembly of Amyloid-β (Aβ) peptides into amyloid fibrils is pathologically linked to the development of Alzheimer's disease. Polymorphic Aβ structures derived from monomers to intermediate oligomers, protofilaments, and mature fibrils have been often observed in solution. Some aggregates are on-pathway species to amyloid fibrils, while the others are off-pathway species that do not evolve into amyloid fibrils. Both on-pathway and off-pathway species could be biologically relevant species. But, the lack of atomic-level structural information for these Aβ species leads to the difficulty in the understanding of their biological roles in amyloid toxicity and amyloid formation.

Γ-Ct Measurement And Cfd Simulation Of Cross Section Gas Holdup Distribution In A Gas-Liquid Stirred Standard Rushton Tank, Yue Jin Liu, Wei Li, Lu Chang Han, Yang Cao, He An Luo, Muthanna H. Al-Dahhan, M. P. Dudukovic

Chemical and Biochemical Engineering Faculty Research & Creative Works

Cross Section Gas Holdup Distributions at 3/4 Dimensionless Static Liquid Height in a Gas-Liquid Stirred Standard Rushton Tank Were Measured using 137Cs Γ-CT Scan Measuring Technology at Larger Gas Flow Rates and Higher Impeller Rotating Speeds. the Obtained CT Scan Images and Digital Distribution Curves of Gas Holdup with Dimensionless Radius based on the CT Images Could Explain the Fluctuation Changes of Gas Holdup Distribution. the Dense Area of Gas Holdup Distribution Appeared in the Upper Space of Impeller Blades. Gas Holdup Increased Both with Gas Flow Rate and Impeller Rotating Speed, But Gas Flow Rate Had More Influence on …

Optimizing The Use Of Ultrasound To Deliver Chemotherapeutic Agents To Cancer Cells From Polymeric Micelles, Ghaleb A. Husseini, Nabil M. Abdel-Jabbar, Farouq S. Mjalli, William G. Pitt, Ala'a Al-Mousa

Faculty Publications

In this study, we present an artificial neural network (ANN) model that attempts to predict the dynamic release of doxorubicin (Dox) from P105 micelles under different ultrasonic power densities at 20 kHz. The goal is to utilize the developed ANN model in optimizing the ultrasound application to achieve a target drug release at the tumor site by controlling power density and ultrasound duration via an ANN-based model predictive control. The parameters of the controller are then tuned to achieve good reference signal tracking.

Glucose Biosensor Using Electrospun Mn2o3-Ag Nanofibers, Shan Huang

Master's Theses

The highly porous Mn₂O₃-Ag nanofibers were fabricated by a facile two-step procedure (electrospinning and calcination) and then employed as the immobilization matrix for glucose oxidase (GOD) to construct an amperometric glucose biosensor. A notable enhancement of direct electron transfer between GOD and the electrode is observed at the Mn₂O₃-Ag-GOD modified electrode with a fast electron transfer rate constant. The biosensor also shows fast response to glucose, high sensitivity (40.60 μA×mM^-1×cm^-2), low detection limit (1.73 µM at S/N=3), low K_m,app value and excellent selectivity. These results indicate that …

Sol-Gel Derived Silver-Incorporated Titania Thin Films On Glass: Bactericidal And Photocatalytic Activity, Betul Akkopru Akgun, Anthony W. Wren, Caner Durucan, Mark R. Towler, Nathan P. Mellott

Chemical and Biochemical Engineering Faculty Research & Creative Works

Titanium dioxide (TiO₂) and silver-containing TiO₂ (Ag-TiO₂) thin films were prepared on silica pre-coated float glass substrates by a sol-gel spin coating method. The bactericidal activity of the films was determined against Staphylococcus epidermidis under natural and ultraviolet (UV) illumination by four complementary methods; (1) the disk diffusion assay, (2) UV-induced bactericidal test, (3) qualitative Ag ion release in bacteria inoculated agar media and (4) surface topographical examination by laserscan profilometry. Photocatalytic activity of the films was measured through the degradation of stearic acid under UV, solar and visible light conditions. The chemical state and …

Clinical Risk Factors For Osteoporosis In Ireland And The Uk: A Comparison Of Frax And Qfracturescores, N. M. Cummins, E. K. Poku, Mark R. Towler, O. M. O'Driscoll, S. H. Ralston

Chemical and Biochemical Engineering Faculty Research & Creative Works

Recently two algorithms have become available to estimate the 10-year probability of fracture in patients suspected to have osteoporosis on the basis of clinical risk factors: the FRAX algorithm and QFractureScores algorithm (QFracture). The aim of this study was to compare the performance of these algorithms in a study of fracture patients and controls recruited from six centers in the United Kingdom and Ireland. A total of 246 postmenopausal women aged 50-85 years who had recently suffered a low-trauma fracture were enrolled and their characteristics were compared with 338 female controls who had never suffered a fracture. Femoral bone mineral …

Detection Of Specific Biological Antigens Using Ac Electrochemical Impedance Spectroscopy, Darrel Angelo Mazzari

Dissertations (1934 -)

When certain antigens are present in our environment, a rapid, on-site, accurate, selective, and repeatable detection method can be invaluable in preventing illness or saving lives. Rapid detection of these antigens is important to avert spreading infections.

Currently, capturing a sample and sending it to a laboratory can take weeks to get results, which can be much too long. Conventional sensing methodologies include various electrical measurements as capacitive, potentiometric, piezoelectric, surface plasmon resonance (SPR), and quartz crystal microbalance (QCM). Of particular power and interest is Alternating Current (AC) Electrochemical Impedance Spectroscopy (EIS) which provides for the characterization of the electrical …

The Effect Of Adding Organic Polymers To Ca-Sr-Zn-Si Glass Polyalkenoate Cement, A. Coughlan, N. M. Cummins, A. W. Wren, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

To conclude, the addition of polymers to GPCs resulted in little change to the Tw and Ts, however the compressive strength was found to decrease slightly. ASAP tests revealed that the cements may undergo some structural changes as a result of these additions. In the future perhaps the addition of organic polymers suspended in the liquid phase as part of the cement may yield improved results in this type of study. © 2011 IEEE.

Aluminium-Free Glass Polyalkenoate Spinal Cements, A. W. Wren, N. M. Cummins, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Addition of Yitanium increased the Wt & St and the sf strength of these cements compared to the control (BT 101). © 2011 IEEE.

Temperature Control Device With A Flexible Temperature Control Surface, Phil D. Belgrader, Christopher G. Cooney, Robert D. Doebler, Anna D. Hickerson, Bruce D. Irvine, Ali D. Nadim, James D. Sterling, Reza Miraghale

Business and Information Technology Faculty Research & Creative Works

A device for controlling temperature in a reaction chamber is disclosed. The device comprises: a bladder assembly comprising a housing dimensioned to hold a reaction chamber disposed within an interior Volume of the housing; and a first temperature-control bladder disposed within the housing, the first temperature-control bladder is configured to receive a temperature-control fluid and comprises a flexible, heat conductive Surface that comes in contact with at least a portion of an exterior surface of the reaction chamber after receiving the temperature-control fluid. Also disclosed are a bladder thermal cycler, a temperature-control bladder assembly and methods for producing a thermal …

The Yin And Yang Actions Of North American Ginseng Root In Modulating The Immune Function Of Macrophages, Chike Godwin Azike, Paul Abrahams Charpentier, Jirui Hou, Hua Pei, Edmund Man King Lui

Physiology and Pharmacology Publications

BACKGROUND: Immuno-modulatory effects of ginseng, including both immuno-stimulatory and immuno-suppressive effects, have been widely reported. This study aims to determine whether the paradoxical immuno-modulatory effect is related to unique phytochemical profiles of different North American (NA) ginseng, namely aqueous (AQ) and alcoholic (ALC) extracts.

METHODS: AQ and ALC extracts were prepared and their immuno-bioactivity were studied in vitro in murine macrophages (Raw 264.7) through measuring the direct stimulatory production of pro-inflammatory mediator and cytokines as well as the suppression of lipopolysaccharide (LPS)-stimulatory response by the two extracts. Gel permeation chromatography was used to fractionate and isolate phytochemicals for characterization of …

Epoxy/Pcl/Cnf Nanocomposite Towards Electrically Triggered Self-Healing And Reversible Adhesion, Lawrence Matthew Levy

Renée Crown University Honors Thesis Projects - All

In this report, we summarize the results of research related to development of an electrically-triggered reversible-adhesive material. The material is made of an epoxy comprised of diglcidyl ether of bisphenol-A (DGEBA) and 4,4’-diaminodiphenylsulfone (DDS). By combining the epoxy with PCL a “bricks and mortar” morphology is created with reversible adhesion properties. A phenomenon known as differential expansive bleeding (DEB) is the driving force of the self-healing and reversible-adhesion. The epoxy/PCL was embedded within electrically conductive carbon nanofibers (CNF) created from electrospun poly(acrylonitrile) (PAN). The material’s high conductivity allowed convenient heating with a power source. Initial tests revealed a lack of …

De Novo Gene Synthesis By Rapid Polymerase Chain Assembly Coupled With Immunoaffinity Purification: A Novel Process And Workstation, Joel R. Termaat

Department of Chemical and Biomolecular Engineering: Dissertations, Theses, and Student Research

The de novo synthesis of genes is emerging as a powerful tool in biotechnology. The ability to synthesize genes of any desired sequence opens the door to seemingly unlimited research possibilities. Major advances have been made recently in de novo gene synthesis, with Polymerase Chain Assembly (PCA) routinely used to construct functional sequences from short single-stranded oligonucleotides. However, current PCA techniques are lacking in speed and fidelity. Additionally, substantial undesired reactants/products are present in the final reaction. A novel process and accompanying workstation has been developed that incorporates rapid PCA synthesis coupled with subsequent affinity purification of the synthesis mixture. …

Leaching Of Potential Hazardous Elements Of Coal Cleaning Rejects, Luis F.O. Silva, Maria Izquierdo, Xavier Querol, Robert B. Finkelman, Marcos L.S. Oliveira, Marcus Wollenschlager, Mark R. Towler, Rafael Pérez-López, Felipe Macias

Chemical and Biochemical Engineering Faculty Research & Creative Works

The geochemical characteristics of coal cleaning rejects (CCR) in Santa Catarina State, Brazil, were investigated. Around 3.5 million ton/ year of coal waste are dumped in Santa Catarina State. Coal beneficiation by froth flotation results in large amounts of CCR composed of coaly and mineral matter, the latter characterized by the occurrence of sulphide minerals and a broad array of leachable elements. The total and leachable contents of more than 60 elements were analyzed. Atmospheric exposure promotes sulphide oxidation that releases substantial sulphate loads as well as Ca²⁺, K⁺, Mg²⁺, Cl- and Al^{3+ …}

Hemocompatibility Of Silicon-Based Substrates For Biomedical Implant Applications, Lingyan Liu

Chemical, Biomolecular, and Corrosion Engineering Faculty Research

Silicon membranes with highly uniform nanopore sizes fabricated using microelectromechanical systems (MEMS) technology allow for the development of miniaturized implants such as those needed for renal replacement therapies. However, the blood compatibility of silicon has thus far been an unresolved issue in the use of these substrates in implantable biomedical devices. We report the results of hemocompatibility studies using bare silicon, polysilicon, and modified silicon substrates. The surface modifications tested have been shown to reduce protein and/or platelet adhesion, thus potentially improving biocompatibility of silicon. Hemocompatibility was evaluated under four categories—coagulation (thrombin–antithrombin complex, TAT generation), complement activation (complement protein, C3a …

Verification And Validation Of Cfd Simulations For Local Flow Dynamics In A Draft Tube Airlift Bioreactor, Hu Ping Luo, Muthanna H. Al-Dahhan

Chemical and Biochemical Engineering Faculty Research & Creative Works

Airlift Reactors Have Been Recognized as One of the Promising Photobioreactors for Biomass/bio-Energy Production, Where Mixing Has Significant Impact on the Reactor Performance. in Recent Years, using CFD Simulations to Track Microorganism Cells and to Generate their Trajectories in the Reactor for Reactor Performance Evaluations Becomes More Common. However, there is a Lack of Systematic and Rigorous Verifications and Validations of the Reliability of CFD Models in Particle Tracking Against Experimental Measurements in the Open Literature, Which is Vital for the Faithful Application of CFD in Reactor Design and Scale-Ups. in This Work, We Attempt to Evaluate the Reliability of …

The Structural Role Of Titanium In Ca-Sr-Zn-Si/Ti Glasses For Medical Applications, A. W. Wren, F. R. Laffir, A. Kidari, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Glasses for medical applications are used in particulate form or as a cement component. This work was undertaken to determine structural changes in 0.48SiO₂-0.36ZnO-0.12CaO-0.04SrO glass when the SiO₂ is substituted with 5 mol% increments of TiO2. X-ray Diffraction (XRD) was used to determine the presence of crystallinity. This occurred after additions of 20 mol% TiO₂. Differential Thermal Analysis (DTA) and Network connectivity (NC) calculations determined that by increasing the TiO₂ content, the T_g and NC reduced (T_g 670 °C to 632 °C, NC 1.83 to -1.14) suggesting that TiO₂ acts as …

Flow Regime Identification In A Bubble Column Via Nuclear Gauge Densitometry And Chaos Analysis, S. Nedeltchev, A. Shaikh, Muthanna H. Al-Dahhan

Chemical and Biochemical Engineering Faculty Research & Creative Works

The Bubble Column Performance Can Change Significantly as a Result of Flow Regime Change. Since Reactor Volume Productivity, Mass and Heat Transfer as Well as Mixing Are Affected by the Prevailing Flow Regime, It is Very Important to Know How to Identify It. in This Work, Flow Regime Identification Was Performed on the Basis of the Kolmogorov Entropy (KE) Algorithm Applied to Nuclear Gauge Densitometry Data. in Addition, the Average Cycle Time Was Used for Validation of the Results. Three Transition Velocities Were Identified that Delineated the Boundaries of the Three Main Hydrodynamic Regimes. the First Two Transition Points Were …

A Critical Review On Recent Methods Used For Economically Viable And Eco-Friendly Development Of Microalgae As A Potential Feedstock For Synthesis Of Biodiesel, Yogesh C. Sharma, Bhaskar Singh, John Korstad

College of Science and Engineering Faculty Research and Scholarship

Microalgae are being considered as a viable feedstock for large-scale production of biodiesel. However, though it may look simpler to obtain lipids from microalgae, the overall process of choosing an algal strain, cultivation, harvesting, dewatering, and extraction of oil is quite complicated and not economically prudent at this time. A thorough understanding of algae and the overall biodiesel production process discussed in this paper is vital so that focused research might lower the costs involved. Various diverse species of microalgae are currently being used as feedstocks for biofuel. Heterotrophic culture may be preferred over photoautotrophic cultivation. For cultivation, specially fabricated …

The Bioactivity And Ion Release Of Titanium-Containing Glass Polyalkenoate Cements For Medical Applications, A. W. Wren, N. M. Cummins, F. R. Laffir, S. P. Hudson, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

The ion release profiles and bioactivity of a series of Ti containing glass polyalkenoate cements. Characterization revealed each material to be amorphous with a T_g in the region of 650-660°C. The network connectivity decreased (1.83-1.35) with the addition of TiO₂ which was also evident with analysis by X-ray photoelectron spectroscopy. Ion release from cements were determined using atomic absorption spectroscopy for zinc (Zn^₂₊), calcium (Ca^₂₊), strontium (Sr^₂₊), Silica (Si^₄₊) and titanium (Ti4+). Ions such as Zn^₂₊ (0.1-2.0 mg/l), Ca²⁺ (2.0-8.3 mg/l,) Sr²⁺ (0.1-3.9 mg/l), and S^{i4+ …}

The Response Of Pseudomonas Aeruginosa Biofilm To The Presence Of A Glass Polyalkenoate Cement Formulated From A Silver Containing Glass, A. Coughlan, M. P. Ryan, N. M. Cummins, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

No abstract provided.

A Novel Biodiesel And Glycerol Carbonate Production Plant, Nghi T. Nguyen, Yaşar Demirel

Yaşar Demirel Publications

Crude glycerol is the byproduct of biodiesel production plant and the economic value of glycerol may affect the profitability of the biodiesel production plant. As the production rate of bioglycerol increases, its market values drop considerably. Therefore, conversion of bioglycerol into value-added products can reduce the overall cost, hence, leading to a more economical biodiesel production plant. In a direct carboxylation reaction, CO₂ reacts with glycerol to produce glycerol carbonate and water. This study presents a direct comparison of the economic analysis of the conventional biodiesel production plant and the possible next generation biodiesel-glycerol carbonate production plant. At the …

Stability Of Affinity Based Layer-By-Layer Polymeric Self-Assemblies For Oral Wound Applications, Sundar Prasanth Authimoolam

Theses and Dissertations--Chemical and Materials Engineering

Oral mucositis is a painful and debilitating chronic inflammatory condition that can result from chemo and/or radiotherapy. While current treatment strategies which provide temporary relief exist, there is still an unmet clinical need for a robust long active barrier strategy which can simultaneously provide protection and release drug to enhance the wound healing response. It is proposed that an affinity based layer-by-layer self-assembled barrier administered as a series of mouth rinses can allow for wound specific drug delivery, providing an effective regenerative therapy.

In this work, biotinylated poly(acrylic acid) is used to develop LBL assemblies based upon biotin-streptavidin affinity interactions. …