Bioresource and Agricultural Engineering Commons^™

Identifying Changes In Climatic Trends And The Fingerprints Of Landuse And Landcover Changes In The High Plains Of The Usa, Denis Mutiibwa

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Human activities such as conversion of natural ecosystem to croplands and urban-centers, deforestation and afforestation impact biophysical properties of land surface such as albedo, energy balance, and surface roughness. Alterations in these properties affect the heat and moisture exchanges between the land surface and atmospheric boundary layer. The objectives of this research were; (i) to quantitatively identify the High plains’ regional climate change in temperatures over the period 1895 to 2006, (ii) detect the signatures of anthropogenic forcing of LULC changes on the regional climate change of the High Plains, and (iii) examine the trends in evolving regional latent heat …

Analysis Of Site-Specific Adjustment Applied To On-The-Go Soil Sensing Data For Agronomic Use, Allison K. Jonjak

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Successful variable-rate applications of agricultural inputs such as lime rely on the quality of input data. Systematic grid soil sampling is the most common method used for creating variable rate prescription maps. The insufficient number of point measurements usually obtained using this method has been primarily responsible for the typical inaccuracies seen in lime prescription maps. To increase sampling density, on-the-go sensing technology was developed for the mapping of soil pH and other relevant attributes. In this study, five fields in eastern Nebraska were mapped using both on-thego sensing technology and systematic grid sampling. Ten calibration points per field were …

Nutrient Runoff Following Manure Application, Chance Thayer

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

A field study was completed to measure the effects of varying flow rate on nutrient transport following the application of varying amounts of beef cattle manure to plots containing either no-residue or a wheat residue cover.  Beef cattle manure was applied and incorporated into the soil in May 2010 to meet zero, one, two, four or eight year corn phosphorus requirements. Simulated rainfall events were applied in June and July 2010. The presence of a crop residue cover significantly increased the transport of dissolved phosphorus, total phosphorus, NO₃-N, NH₄-N, and total nitrogen in runoff but decreased …

Development Of An Integrated Soil Properties Mapping System, Rajveer S. Dhillon

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

One of the main goals of precision agriculture (PA) is to define spatial variability in soil properties within an agricultural field to make decisions that can maximize profitability and reduce negative environmental impact. Various soil sensor systems have been developed over the years to map soil properties on-the-go. In this study, an Integrated Soil Mapping System (ISMS) was developed to predict soil water content, soil organic matter, and soil mechanical resistance on-the-go using a capacitance moisture sensor, an optical sensor, and a load cell sensor respectively. These sensors were mounted on the ISMS for acquiring three different data layers at …

Enhanced Anthocyanin Extraction From Red Cabbage Using Pulsed Electric Field Processing, Tanya K. Gachovska, David A. Cassada, Jeyamkondan Subbiah, Milford Hanna, Harshavardhan Thippareddi, Daniel D. Snow

Department of Agricultural and Biological Systems Engineering: Faculty Publications

This study was conducted to evaluate the effect of pulsed electric field (PEF) treatment on anthocyanin extraction from red cabbage using water as a solvent. Mashed cabbage was placed in a batch treatment chamber and subjected to PEF (2.5 kV/cm electric field strength; 15 μs pulse width and 50 pulses, specific energy 15.63 J/g). Extracted anthocyanin concentrations (16 to 889 μg/mL) were determined using HPLC. Heat and light stabilities of the control and PEF-treated samples, having approximately the same initial concentrations, were studied. PEF treatments enhanced total anthocyanin extraction in water from red cabbage by 2.15 times with a higher …

Testing Fuel Efficiency Of Tractors With Both Continuously Variable And Standard Geared Transmissions, Christopher N. Howard

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

A John Deere 8295R IVT tractor with a continuously variable transmission (CVT) and a John Deere 8295R PowerShift (PST) tractor (Waterloo, Iowa) with a standard geared transmission (GT) were tested for fuel consumption at three different travel speeds with six different load levels applied per speed. The JD 8295R PST tractor was tested both at full throttle (FT) and shifted up two gears and throttled back (SUTB) to achieve the same travel speed as at full throttle conditions. The three speeds tested corresponded to the maximum speeds achieved in 6th, 8th and 10th gear for the JD 8295R PST tractor …

Effect Of Magnetron Frequency On Heating Pattern In Domestic Oven, Sohan Birla, Krishnamoorthy Pitchai, Jeyamkondan Subbiah, David D. Jones

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

In this study a computer model was developed to simulate microwave heating of a model food with a range of magnetron frequencies. The range was decided upon performing the frequency spectrum analysis of microwave leakage from the microwave oven. Simulation results showed that the magnetron input as sinusoidal frequency from 2.44 GHz to 2.48 GHz generates different heating profiles. The simulated heating profiles were compared with experimental heating profiles obtained by using an IR camera. None of simulations with individual frequency exactly matches with experimental temperature profile. The closet match between simulated and observed temperature profiles was found with 2.46 …

Heating Performance Assessment Of Domestic Microwave Ovens, Krishnamoorthy Pitchai, Sohan Birla, Jeyamkondan Subbiah, David D. Jones

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

Due to inherent nature of standing wave patterns of microwaves inside a cavity and dielectric properties of different components in a food, microwave heating leaves non-uniform distribution of energy inside the food volumetrically. Achieving heating uniformity plays critical role in improving the safety of microwave heated products. In this paper, we present a method for assessing heating uniformity within domestic microwave ovens. A custom designed container
was used to assess heating uniformity of a range of microwave ovens using IR camera. The study suggested that the best place to place food in a microwave oven is not at center but …

The In Vitro Characterization Of Chitosan-Plga Nanoparticle/Plasmid Dna Complexes, Hali Bordelon

Honors Capstones

No abstract provided.

Development Of Novel Microwave Cooking Model For Not-Ready-To Eat Foods, Sohan Birla, Krishnamoorthy Pitchai, Jeyamkondan Subbiah, David D. Jones

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

Recently safety of microwave cooked food has come under scrutiny because of recent outbreak and recalls associated with some of these not-ready-to-eat (NRTE) frozen foods. Heating uniformity of these foods is paramount in rendering the foods safe for consumption. Degree of uneven microwave heating is influenced by both microwave oven and characteristics of food load which decides the electric field distribution within the food load. Given the complexity of parameters, a computer model is always desirable to optimize heating uniformity by proper selection of food shape, proportions, plating, packaging selection and more. Earlier many researchers have made one or more …

Aquatic Bacteria Removal Using Carbon Nanotubes, Suvish Melanta

Biological and Agricultural Engineering Undergraduate Honors Theses

The purpose of this project is to explore the functionality of carbon nanotubes as a bacterial removal method, specifically towards water-borne bacterial pathogens in wastewater by utilizing its unique magnetic and bacteria-binding properties. The general protocol set for this research follows five steps: 1) Preparation of wastewater media, 2) preparation of CNT culture, 3) preparation of reaction mixture with CNTs for bacterial binding, 4) magnetic separation of bacteria-bound-CNT clusters and, 5) assessment of supernatant. The CNTs effectively removed bacterial contaminants in the wastewater (10%, v/v) after the sand filtration process from the Paul R. Noland Wastewater Facility at Fayetteville, Arkansas. …

Pyrene Fate Affected By Humic Acid Amendment In Soil Slurry Systems, Y. Liang, D. Sorensen, Ronald C. Sims, Joan Mclean

Biological Engineering Faculty Publications

Background

Humic acid (HA) has been found to affect the solubility, mineralization, and bound residue formation of polycyclic aromatic hydrocarbons (PAHs). However, most of the studies on the interaction between HA and PAH concentrated on one or two of the three phases. Few studies have provided a simple protocol to demonstrate the overall effects of HA on PAH distribution in soil systems for all three phases.

Methods

In this study, three doses of standard Elliott soil HA (ESHA), 15, 187.5, and 1,875 μg ESHA/g soil slurry, were amended to soil slurry systems. ¹⁴C-pyrene was added to the systems along …

Pyrene Mineralization By Mycobacterium Sp. Strain Kms In A Barley Rhizosphere, R. Child, C. Miller, Y. Liang, Ronald C. Sims, A. J. Anderson

Biological Engineering Faculty Publications

To determine whether the soil Mycobacterium isolate KMS would mineralize pyrene under rhizosphere conditions, a microcosm system was established to collect radioactive carbon dioxide released from the labeled polycyclic aromatic hydrocarbon. Microcosms were designed as sealed, flow-through systems that allowed the growth of plants. Experiments were conducted to evaluate mineralization of ¹⁴C-labeled pyrene in a sand amended with the polycyclic aromatic hydrocarbons degrading Mycobacterium isolate KMS, barley plants, or barley plants with roots colonized by isolate KMS. Mineralization was quantified by collecting the ¹⁴CO₂ produced from ¹⁴C-labeled pyrene at intervals during the 10-d incubation period. Roots …

Temperature Effect On Tert-Butyl Alcohol (Tba) Biodegradation Kinetics In Hyporheic Zone Soils, M. H. Greenwood, Ronald C. Sims, J. E. Mclean, W. J. Doucette

Biological Engineering Faculty Publications

Background

Remediation of tert-butyl alcohol (TBA) in subsurface waters should be taken into consideration at reformulated gasoline contaminated sites since it is a biodegradation intermediate of methyl tert-butyl ether (MTBE), ethyl tert-butyl ether (ETBE), and tert-butyl formate (TBF). The effect of temperature on TBA biodegradation has not been not been published in the literature.

Methods

Biodegradation of [U ¹⁴C] TBA was determined using hyporheic zone soil microcosms.

Results

First order mineralization rate constants of TBA at 5°C, 15°C and 25°C were 7.84 ± 0.14 × 10^-3, 9.07 ± 0.09 × 10^-3, and 15.3 ± 0.3 …

Theory And Application Of Landfarming To Remediate Pahs And Mineral Oil Contaminated Sediments: Beneficial Reuse, J. Harmsen, W. Rulkens, Ronald C. Sims, P. Ritjema, A. Zweers

Biological Engineering Faculty Publications

When applying landfarming for the remediation of contaminated soil and sediment, a fraction of the soil-bound contaminant is rapidly degraded; however, a residual concentration may remain, which slowly degrades. Degradation of polycyclic aromatic hydrocarbons (PAHs) and mineral oil can be described using a multi-compartment model and first-order kinetics, in which three degradable fractions are distinguished; (1) rapid, (2) slowly, and (3) very slowly degradable. Using this model populated with data from long-term experiments (initiated in 1990), it is shown that time frames from years to decades can be necessary to clean the soil or sediment to obtain a target below …

Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome Structure At 1.5 A˚ And Cytochrome Interaction With Metal Complexes, Mrunalini Pattarkine, J J. Tanner, C A. Bottoms, Y H. Lee, Judy D. Wall

Faculty Works

The structure of the type I tetraheme cytochrome c3 from Desulfovibrio desulfuricans G20 was determined to 1.5 A˚ by X-ray crystallography. In addition to the oxidized form, the structure of the molybdate-bound form of the protein was determined from oxidized crystals soaked in sodium molybdate. Only small structural shifts were obtained with metal binding, consistent with the remarkable structural stability of this protein. In vitro experiments with pure cytochrome showed that molybdate could oxidize the reduced cytochrome, although not as rapidly as U(VI) present as uranyl acetate. Alterations in the overall conformation and thermostability of the metal-oxidized protein were investigated …

Beneficial Reuse And Sustainability: The Fate Of Organic Compounds In The Land-Applied Waste, M. R. Overcash, Ronald C. Sims, J. L. Sims, K. C. Nieman

Biological Engineering Faculty Publications

Land application systems, also referred to as beneficial reuse systems, are engineered systems that have defined and permitted application areas based on site and waste characteristics to determine the land area size requirement. These terrestrial systems have orders of magnitude greater microbial capability and residence time to achieve decomposition and assimilation compared with aquatic systems. In this paper we focus on current information and information needs related to terrestrial fate pathways in land treatment systems. Attention is given to conventional organic chemicals as well as new estrogenic and pharmaceutical chemicals of commerce. Specific terrestrial fate pathways addressed include: decomposition, bound …

Studies On The Formation Of Dna-Cationic Lipid Composite Films And Dna Hybridization In The Composites, Murali Sastry, Vidya Ramakrishnan, Mrunalini Pattarkine, Krishna N. Ganesh

Faculty Works

The formation of composite films of double-stranded DNA and cationic lipid molecules (octadecylamine, ODA) and the hybridization of complementary single-stranded DNA molecules in such composite films are demonstrated. The immobilization of DNA is accomplished by simple immersion of a thermally evaporated ODA film in the DNA solution at close to physiological pH. The entrapment of the DNA molecules in the cationic lipid film is dominated by attractive electrostatic interaction between the negatively charged phosphate backbone of the DNA molecules and the protonated amine molecules in the thermally evaporated film and has been quantified using quartz crystal microgravimetry (QCM). Fluorescence studies …

Cationic Surfactant Mediated Hybridization And Hydrophobization Of Dna Molecules At The Liquid/Liquid Interface And Their Phase Transfer, Murali Sastry, Ashavani Kumar, Mrunalini Pattarkine, Vidya Ramakrishnan, Krishna N. Ganesh

Faculty Works

Hybridization of complementary oligonucleotides mediated by a cationic surfactant at the water/hexane interface leads to hydrophobic, double-helical DNA which may be readily phase transferred to the organic phase and cast into thin films on solid substrates.

Hybridization Of Dna By Sequential Immobilization Of Oligonucleotides At The Air-Water Interface, Murali Sastry, Vidya Ramakrishnan, Mrunalini Pattarkine, Anand Gole, K. N. Ganesh

Faculty Works

The hybridization of DNA by sequential electrostatic and hydrogen-bonding immobilization of single-stranded complementary oligonucleotides at the air-water interface with cationic Langmuir monolayers is demonstrated. The complexation of the single-stranded DNA molecules with octadecylamine (ODA) Langmuir monolayers was followed in time by monitoring the pressure-area isotherms. A large (and slow) expansion of the ODA monolayer was observed during each stage of complexation in the following sequence: primary single-stranded DNA followed by complementary single-stranded DNA followed by the intercalator, ethidium bromide. Langmuir-Blodgett (LB) films of the ODA-DNA complex were formed on different substrates and characterized using quartz-crystal microgravimetry (QCM), Fourier transform infrared …

Fate And Behavior Of Lead In Soils Planted With Metal-Resistant Species (River Birch And Smallwing Sedge), S. P. Klassen, J. E. Mclean, P. R. Grossl, Ronald C. Sims

Biological Engineering Faculty Publications

Phytoremediation of metal-contaminated soils requires an understanding of the interactions between metal-tolerant plant species and soil chemical properties controlling the bioavailability of metals. We conducted controlled laboratory studies to investigate the effects that river birch (Betula occidentalis Hook.) and smallwing sedge (Carex microptera Mack.) had on the fate and behavior of Pb in a contaminated soil (3000 mg Pb/kg) and tailings (13 000 mg Pb/kg) collected from an abandoned mining site in Utah. Significant Pb accumulation in aboveground tissue was observed in smallwing sedge (≥1000 mg/kg dry wt.) in both the soil and tailings, but Pb was primarily excluded by …

Controlled Environment Potentiostat To Study Solid-Aqueous Systems, R A. Petrie, P. R. Grossl, Ronald C. Sims

Biological Engineering Faculty Publications

We designed a redox apparatus that controls electropotenial (Eh), pH, and temperature. The apparatus is fully automated and can be assembled from equipment found in most soil analytical laboratories. The reactor can maintain environmental conditions used to evaluate the chemical fate of contaminants under natural conditions (natural attenuation) or adjust them to a new steady state to evaluate the effect of engineered remediation on a subsurface system. It can operate within a wide range of redox potential values (−400 to 400 mV) and at any pH value. The stability and accuracy of the instrument was tested by performing Eh-pH titrations …

Anion Induced Blue To Purple Transition In Bacteriorhodopsin, Mrunalini Pattarkine, Anil K. Singh

Faculty Works

Purple membrane (PM, λ" role="presentation">λmax" role="presentation">max 570 nm) of H. halobium on treatment with sulphuric acid changes its colour to blue (λ" role="presentation">λmax" role="presentation">max 608 nm). The purple chromophore can be regenerated from the blue chromophore by exogeneous addition of anions such as CI−" role="presentation">− and HPO42−" role="presentation">2−4. Chloride ion is found to be more effective than the dibasic phosphate ion in regenerating the purple chromophore. Nevertheless, one thing common to the anion regeneration is that both CI−" role="presentation">− and HPO42−" role="presentation">2−4 show marked pH effect. At pH 1.0 the efficiency of …

Development Of A Biologically Based Aerobic Composting Simulation Model, Dennis P. Stombaugh, Sue E. Nokes

Biosystems and Agricultural Engineering Faculty Publications

A relatively simple dynamic model based on microbial process kinetics has been developed for aerobic composting. Differential equations describing microbial, substrate, and oxygen concentrations, as well as moisture and temperature profiles have been derived as a function of vessel size and aeration rate. Microbial biomass growth was described using Monod growth kinetics as a function of degradable substrate concentration, oxygen concentration, moisture content, and compost temperature. Facility and fan operating costs have been included to permit economic optimization of the process. Predicted results demonstrated the ability of the model to quantify and describe the influence of multiple interacting factors (temperature, …

Mn-Catalyzed Oxidation Of Multiple-Ringed Aromatics, G. Whelan, Ronald C. Sims

Biological Engineering Faculty Publications

The role of manganese (Mn) oxides in catalyzing the abiotic oxidation of polynuclear aromatic compounds (PNAs) has been investigated by monitoring the oxidation of dihydrodiol and dione PNAs and corresponding reduction of Mn in an aqueous environment. 1,4-, 1,3-, and 2,3-naphthalenediol, 1,4-naphthoquinone, and l,4-dihydroxy-9,10-anthracenedione (Quinizarin) were oxidized in an oxic, aqueous environment, where each of these organic compounds is soluble in water, except Quinizarin. A mathematical model is presented, which describes the redox reactions, and suggests that electron transfer/organic release from the oxide surface is rate limiting with the reaction apparently proceeding through a free-radical formation. Results indicate significant oxidation …

Treatment Of Pentachlorophenol With Manganese Oxide Addition To Biotic And Abiotic Sediments, R. Petrie, J. E. Mclean, Ronald C. Sims

Biological Engineering Faculty Publications

Laboratory microcosms containing subsamples of a complex environmental sediment were used to evaluate the addition of oxidized manganese as the primary electron acceptor in the presence of pentachlorophenol (PCP) as the primary electron donor. Manganese oxide (MnO₂) particles were added to poisoned abiotic and non-poisoned biotic microcosms and incubated at 11°C in the presence of sediment samples that were shown capable of mineralizing PCP with indigenous microorganisms. Reduction in PCP concentration and production of reduced manganese was measured for both abiotic and biotic systems.

PCP was observed to be transformed most rapidly and to the greatest extent in …

Evaluation Of Biological Treatability Of Soil Contaminated With Manufactured Gas Plant Waste, J. S. Ginn, Ronald C. Sims, I. P. Murarka

Biological Engineering Faculty Publications

The biological treatability of subsurface soil contaminated with manufactured gas plant (MGP) waste was evaluated. Mineralization assays incorporating ¹⁴C-phenanthrene were used to evaluate the biotransformation potential of indigenous microorganisms at the site. Multi-phase laboratory microcosms were used to evaluate the interphase transfer potential and chemical mass distribution of phenanthrene. The Microtox™ bioassay was used to evaluate detoxification trends at the site. Mineralization results indicated that indigenous microorganisms at the site were capable of transforming phenanthrene, a component of coal-tar creosote. Results also indicated that spiked ¹⁴C-phenanthrene mineralization was influenced by nutrient addition and by the amount of contamination. …

Mn-Catalyzed Oxidation Of Naphthalenediol, G. Whelan, Ronald C. Sims

Biological Engineering Faculty Publications

This study investigates the effects that manganese(IV) dioxide particles have on 2,3-naphthalenediol at varying pH levels (i.e., initial pH of 4.58, 5.85, and 8.75) and under different organic concentration conditions (4×¹⁰⁻³, 4×¹⁰⁻⁴, and 4×¹⁰⁻⁵ M), and assesses the importance of Mn oxides on abiotic catalysis of the multiple-ringed aromatic compound. Proton concentration affected the rates of reductive dissolution; as the pH values increased, the rate of reductive dissolution decreased, as predicted by theory. Also, as the concentration of naphthalenediol increased, the rate of reductive dissolution increased, although not proportionally; thus indicating that a majority of …

High Shear Mixing Reactor For Glycerolysis, Hossein Noureddini

Papers in Biomaterials

lnrcreased ervironmental awareness and depletion of resources are driving industry to develop aiternative fuels from renewable resources that are environmentally more acceptable. Esters of fatty acids (biodiesel), derived from the transesterification of vegetable oils, have properties similar to cornponents of petroleum based diesel fuel. Cost has been a major factor in slowing down the commercialization of biodiesel. In order to improve the economy of this process two factors were investigated in this study: 1) use of beef tallow as raw material and 2) by-product utilization.

Glycerol is the by-product of the esterification process. In this work the feasibility of the …

Hycrest Crested Wheatgrass Accelerates The Degradation Of Pentachlorophenol In Soil, A. Ferro, Ronald C. Sims, B. Bugbee

Biological Engineering Faculty Publications

We investigated the effects of vegetation on the fate of pentachlorophenol (PCP) in soil using a novel high-flow sealed test system. Pentachlorophenol has been widely used as a wood preservative, and this highly toxic biocide contaminates soil and ground water at many sites. Although plants are known to accelerate the rates of degradation of certain soil contaminants, this approach has not been thoroughly investigated for PCP. The fate of [14C]PCP, added to soil at a concentration of 100 mg/kg, was compared in three unplanted and three planted systems. The plant used was Hycrest, a perennial, drought-tolerant cultivar of crested wheatgrass …