Biomedical Engineering and Bioengineering Commons^™

A Novel Hybrid Re-Entrant Double Arrowhead With Active Link Auxetic Metamaterial: Finite Element Approach, April Nguyen

College of Engineering Summer Undergraduate Research Program

Auxetic metamaterials are a category of material that exhibit a negative Poisson's ratio (NPR). NPR materials contract when compressed and expand when stretched. NPR properties are typically produced through a complex unit cell consisting of folds, internal angles, or other specially designed shapes with internal voids capable of collapsing in on themselves. Individual unit cells that display these properties are developed and stacked or layered in a repeating pattern such that a larger body can be manufactured, maintaining the same properties. NPR auxetic structures show either a stretch-dominated mechanism (SDM) or a bending-dominated mechanism (BDM). SDM-based NPR structures are favored …

Computational Investigation Of The Role Of 3d Genome Architecture In The Lifecycle Of The Malaria Parasite, Srish Maulik

College of Engineering Summer Undergraduate Research Program

Malaria, a mosquito-borne infectious disease caused by the Plasmodium parasite, is responsible for more than a half a million deaths per year, the vast majority of which occur in central Africa. The parasite undergoes an incredibly complex cell molecular transformation as it transitions from living in mosquitoes to living in humans with different sets of genes being activated or silenced in order to evade the immune system of the host. Understanding how its genome guides this transition is critical for developing adequate treatments. In this project, we aim to develop a computational framework for investigating the role of the three …

Impulse, Fall 2025, Jill Fier, Sierra Brown, Jerome J. Lohr College Of Engineering

Impulse (Jerome J. Lohr College of Engineering Publication)

2 | Faculty News
3 | SDSU Vet Hua to Head Civil Engineering
6 | Ad Lunam — To the Moon
10 | Building A Safety Culture
11 | Department News
12 | Surface Mount Technology Kickoff
14 | Construction Management Student, Volleyball Player Building Success Piece by Piece
16 | Student Awards, Honors
18 | Student Competition Results
20 | NASA Win Opens Doors for New Product Development Order
22 | SDSU Engineering Student Tabbed as Noblereach Fellow
26 | Knabach Award Recipient from Apprentice Lineman to Company President
28 | Metzger Create Faculty Endowment for SDSU Engineering
30 …

Characterization Of The Fatigue Threshold Behavior Of Uhmwpe, Bethany B. Smith, Anurag Roy, Robert O. Ritchie, Lisa A. Pruitt

Faculty Journal Articles

Ultra-high-molecular-weight-polyethylene (UHMWPE) has been the material of choice for bearings in total joint replacements (TJRs) for decades as a result of its excellent wear resistance, chemical inertness, energetic toughness, low friction, and biocompatibility. Utilization of this polymer in orthopedic devices requires oxidation, wear, and fatigue resistance. Balancing these important properties by tailoring processing techniques and modulating microstructural features has been an ongoing endeavor in the field. Research into the clinical applications of UHMWPE has primarily focused on the challenges of wear and oxidation while studies into the realm of fatigue have been more limited. Literature gaps exist in fully understanding …

Stretchable Mechanoluminescent Devices For Energy Harvesting And Real-Time Force Sensing, Lucas Taliaferro, Phoebe Ong

College of Engineering Summer Undergraduate Research Program

Our group has been developing a novel manufacturing technique to fabricate flexible sensing devices using electrostatic force. Previously, we focused on utilizing nanomaterials as the sensing materials to measure strains. Building on our experience with the manufacturing technique, we will move forward to incorporate other smart materials in the flexible device to achieve self-powered sensors. Besides, to better understand the fabricated material properties, we are interested in characterizing the microstructural behavior of the material networks via microscopic imaging and finite element simulations. The students will have the opportunity to closely work with Dr. Wang’s interdisciplinary research group.

A Biomimetic Fe Model Of The Human Foot For Kinematic And Footwear Analysis, Brady K. Nakamura

College of Engineering Summer Undergraduate Research Program

The idea of the present proposal is to develop a biomimetic foot model and validate the model accuracy in predicting plantar stresses on the foot, using insole pressure sensors. The incidences of foot pain can often be coupled with uncomfortable footwear and prolonged usage of a shoe may be associated with long-term musculoskeletal disorders in the lower limb. While multiple studies have tracked the progression of knee osteoarthritis (OA) or midfoot OA and have studied the effect of orthotic treatment on the foot pain across individuals [1], there are few biomimetic models of the foot that can study and associate …

Performance Dashboard Design For Radiologists: Highlighting What Matters & Fostering Improvement, Trevor Knotts, Jemma Simpson, Coleman Hawkins

College of Engineering Summer Undergraduate Research Program

TurboRad has developed a system with proven results that streamlines radiology report creation and improves radiologist productivity. A study performed in 2023 found that “the advanced macro-button toolbar system has great correlation for both lower report completion times and increased wRVU productivity. The benefits of the toolbar system are most evident in the simpler XR reports. Though they are simpler to read and complete reports, the greater quantity of XR reports contributes to a greater overall wRVU completion rate throughout the day as radiologists can spend more time on more complex examinations and reports” (Chow, Speece, & Holtzman, 2024). Since …

Gut Microbiome Dynamics In Heart Failure And The Therapeutic Potential Of Nmeg-Cgrp, Kamryn Michael Gleason

Theses and Dissertations

Heart failure (HF) is increasingly recognized as a multisystem disease often linked to gut dysbiosis; however, its specific effects on gut microbial composition remain poorly understood. This study examined long-term changes in the gut microbiome in a murine HF model induced by transverse aortic constriction (TAC) and evaluated the effects of NMEG-CGRP. TAC mimics pressure overload-induced cardiac dysfunction, replicating key features of HF. CGRP, a neuropeptide with vasodilatory and cardioprotective effects, shows potential as a therapy for HF but is limited by rapid degradation. A stabilized analog, NMEG-CGRP, was used to assess its impact on cardiac and gastrointestinal health. Mice …

Multiscale Geometric Analysis In Endovascular Therapies: Ex Vivo, In Silico Approaches, Dima Hussein Ali Bani Hani

Theses and Dissertations

In this work, we address a persistent global challenge of vascular disease, specifically peripheral artery disease (PAD), and arteriovenous fistula (AVF) complications in patients with end-stage kidney disease (ESKD). The important role of vascular geometry in disease intervention plans and the development of endovascular therapeutic strategies (e.g., Drug-coated balloon (DCBs)) is critical in addressing these challenges.

This study evaluates the feasibility of co-delivery of paclitaxel (PTX) and valsartan (VAL) using urea-based coatings in DCB, analyzes the coating morphology and microstructural changes to improve therapeutic results. A computational finite element model was developed to complement experimental work, simulate tissue-coating interactions, compute …

An Active Electrode Electrical Impedance Tomography Probe For Intraoperative Surgical Margin Assessment In Robotic-Assisted Radical Prostatectomies, Allaire Doussan

Dartmouth College Ph.D Dissertations

Prostate cancer is the most common cancer among men and the second most common cancer overall in the United States, with 288,300 new cases in 2023 and 1.4 million globally. Approximately 40.5% of patients undergo radical prostatectomy (RP), where the primary goal is complete tumor removal while preserving neurovascular structures and urethral length to maintain erectile function and continence. Achieving this balance contributes to variable positive surgical margin (PSM) rates, reported between 4–48% (average 21%). PSMs increase recurrence risk and often necessitate costly, noxious adjuvant therapies. Despite this there is no widely adopted method for intraoperative margin assessment in real …

Exploring Object Status Recognition For Recipe Progress Tracking In Non-Visual Cooking, Franklin Mingzhe Li, Kaitlyn Ng, Bin Zhu, Patrick Carrington

Research Collection School Of Computing and Information Systems

Cooking plays a vital role in everyday independence and well-being, yet remains challenging for people with vision impairments due to limited support for tracking progress and receiving contextual feedback. Object status — the condition or transformation of ingredients and tools — offers a promising but underexplored foundation for context-aware cooking support. In this paper, we present OSCAR (Object Status Context Awareness for Recipes), a technical pipeline that explores the use of object status recognition to enable recipe progress tracking in non-visual cooking. OSCAR integrates recipe parsing, object status extraction, visual alignment with cooking steps, and time-causal modeling to support real-time …

A Novel Scaffold-Based Model For Stage Ii Pressure Injury Simulation: Protocol Development And Future Directions In Tissue Engineering, Skyler B. Wrubleski

Undergraduate Research and Scholarship Symposium

This study developed a 3D tissue-engineered scaffold to mimic human sacral skin for modeling pressure injuries. The scaffold consisted of a composite hydrogel of sodium alginate, gelatin, and tannic acid, crosslinked with calcium chloride. Swelling tests showed moderate hydration capacity, while wound mimic formation using a custom 3D-printed apparatus produced consistent morphology and dimensions comparable to human dermal tissue. The scaffold maintained structural integrity under prolonged compressive forces, demonstrating viability for pressure injury studies. Future work will incorporate a bilayer model with keratinocytes and fibroblasts and introduce elastin to enhance elasticity and mechanical properties. This approach aims to improve in …

Comparison Of Peening Effect Between Additive Manufacutred And Drawing Titanium Alloy, Hitoshi Soyama

15th International Conference on Shot Peening

Although additively manufactured (AM) metals are attractive materials, their remarkable weak fatigue properties are an obstacle to their practical application. Thus, post-processing to improve their fatigue properties is required. In the present study, powder bed fusion using laser sintering titanium alloy, i.e., PBF-LS/Ti6Al4V was treated by shot peening (SP), submerged laser peening (SLP), cavitation peening (CP), and fine particle bombarding (FPB), then the fatigue properties were investigated by a torsional fatigue test, comparing with drawing Ti6Al4V. It was revealed that the fatigue strength at 10⁷ was 446 ± 5 MPa for PBF-LS/Ti6Al4V treated by FPB+CP, 359 ± 9 MPa …

Design Of Non-Invasive Device To Measure Differential Flow In The Carotid Arteries, Rachel Elisabeth Jacquay

Masters Theses

A stroke is categorized as quickly developing symptoms of cerebral function loss with no apparent cause other than that of vascular origin. Stroke detection in prehospital settings, such as an ambulance, is subjective and often requires additional imaging methods to obtain a definitive conclusion. Common non-invasive methods for stroke detection include Magnetic Resonance Imaging (MRI) and Computed Tomography (CT) scans. Still, these techniques can be expensive, time-consuming, and dangerous due to exposure to strong magnetic fields and radiation. Two additional methods have been proposed for quick, inexpensive, and non-invasive stroke detection, namely Ultrasound Doppler and Pressure Transducer. A simplified physical …

Nonlinear Analytical Models Of The Seismically Isolated ``Frame-Boiler'' System With Cantilever-Type Hysteresis Dampers, Aleksandr Mikhailovich Anushchenko, Dmitrii Evgenievich Bondarev, Aleksandr Yurievich Schukin

Journal of Sustainable Construction Materials and Technologies

This study shows results of development of the ``frame-boiler'' system with hysteresis dampers analytical model. Hysteresis dampers are used as boiler antiseismic bracing. It is noted that simplified analytical models are necessary at the stage of preliminary iterative calculations, when a CAE-modeling is impractical due to significant time costs. The authors have proposed 2 options of analytical models: 2-mass model and 3-mass model. The differential equations of motion for each model are written below. The results of the calculation for seismic impacts are compared with the finite element model. It is shown that 3-mass model gives good match of results …

Advancing Sustainable Structural Solutions: Hemp Fiber-Reinforced Polymer (Hfrp) Reinforcement Bars For Concrete Applications Through Material Selection, Simulation, And Pathways For Future Development, Thomas Cadenazzi, Busra Keles

Journal of Sustainable Construction Materials and Technologies

This paper investigates innovative Hemp Fiber-Reinforced Polymer (HFRP) rebars as a sustainable alternative to conventional Carbon Steel (CS) and Glass Fiber-Reinforced Polymer (GFRP) rebars used as reinforcement in concrete structures. The feasibility of HFRP rebars is assessed, focusing on mechanical properties and sustainability advantages. A virtual tensile test on a modeled M19 HFRP rebar, conducted using Autodesk's Fusion 360, demonstrates tensile strength comparable to CS 235 and greater environmental sustainability than GFRP, despite a slight reduction in stiffness. The study also considers the potential of graphene fiber integration to enhance mechanical properties, underscoring HFRP's adaptability. Findings suggest that HFRP rebars, …

Analysis Of Modifications To An Outdoor Field-Scale Rotating Algal Biofilm Reactor With A Focus On Biomass Productivity And Power Usage, Davis R. Haag, Phillip E. Heck, Ronald C. Sims

Biological Engineering Student Research

Filtrate from dewatering anaerobically digested biosolids is a side-stream of wastewater treatment that contains high concentrations of nitrogen and phosphorus compounds that can serve as nutrients for cultivating microalgae biomass as biofilms for bioproduct production at Water Resource Recovery Facilities (WRRFs). One system used to cultivate attached microalgae biofilms is the rotating algal biofilm reactor (RABR). A pilot RABR with 72 m² growth surface area, 11.5 m² footprint area, and a liquid volume of 11,500 L was operated in an outdoor environment at the largest WRRF in Utah, U.S.A, the Central Valley Water Reclamation Facility (CVWRF). The configuration …

Bioresources And Bioproducts: A New Open Access Journal, Ronald C. Sims

Biological Engineering Faculty Publications

Greetings to the bioresource and bioproducts community! I will serve as the Editor-in-Chief to collaborate with you as we promote the aims and scope of this new MDPI journal [1], with the help of its distinguished Editorial Board, by publishing Special Issues, Topics, Topical Collections, and Editorials, and by providing high-impact scholarship through the outstanding published work of each of our contributors.

Comparative Analysis Of Life Cycle Assessment Of Traditional And Contemporary Timber Buildings, Sadık Akşar, Gökçe Tuna

Journal of Sustainable Construction Materials and Technologies

Wood has long been used as a primary building material, but with the Industrial Revolution and the spread of multi-story structures, its structural limitations became evident. In the 21st century, engineered timber products have reintroduced wood as a sustainable alternative, offering advantages such as lightness, rapid assembly, and recyclability. At the same time, buildings are responsible for significant environmental impacts, making assessment methods essential. Life Cycle Assessment (LCA) is one of the most widely used tools for evaluating these impacts across all stages of a building’s life cycle. This study applies LCA to timber construction systems, focusing on both traditional …

Sustainable Paving Block Development: Utilizing Rejected Coal As Filler And Assessing Its Impact On Paving Block’S Properties, Siti Nikmatin, Allen Kurniawan, Heriansyah Putra, Rima Fitria Adiati, Riawan Ma’Ruf, Dwi Arso Yedi Irwanto

Journal of Sustainable Construction Materials and Technologies

This study investigated the potential use of rejected coal as a fine aggregate filler in paving block production. Comprehensive characterization of the rejected coal was conducted, including toxicity, physical, chemical, and mineralogical analyses of the coal. The results showed that the rejected coal met environmental safety standards (TCLP) and had suitable properties as an aggregate. Paving blocks were produced by incorporating different proportions of rejected coal fillers and were tested for compressive strength, water absorption, and density. The optimal mix with 35% rejected coal filler as a replacement of stone ash achieved a compressive strength of 14.61 MPa, water absorption …

Numerical Comparative Study Of The Thermal Performance And Load-Bearing Capacity Of Hollow Clay Bricks Used In Construction In Libya, Osama Lawej, Mahmoud Ahmed, Ismael Ehtiwesh

Journal of Sustainable Construction Materials and Technologies

The optimization of structural and thermal performance in building components is a key challenge in sustainable construction, particularly in hot climate regions like Libya. Hollow clay bricks are widely used due to their local availability and affordability; however, their internal geometry is often not optimized for thermal resistance or mechanical integrity. This study addresses this gap by numerically investigating the effect of cavity geometry on the load-bearing capacity and thermal insulation performance of hollow clay bricks. Three configurations were analyzed, including two commercial designs from the Libyan market and a newly proposed arched cavity design. Finite Element Method (FEM) simulations …

Developing A Modular Circular Wall Over-Clad System For Facade Thermal Upgrade In Deep Energy Retrofit, Patrick Daly

Journal of Sustainable Construction Materials and Technologies

The EU has implemented several policy and legislative initiatives aimed at decarbonisation and circularity transition of the Built Environment including a strategy for large scale renovation of the building / housing stock. Modularised construction solutions are argued to be a potential acceleration pathway toward this objective. Yet there remains issues and challenges in implementing such strategies in a complex and heterogeneous stock and sector. This research investigates this decarbonisation pathway, examining the feasibility and potential of applying a modularised construction over-clad system, based on advanced circularity, in the deep energy retrofit of social housing. The research is based on a …

Smart Dressings Accelerating Wound Healing With Tranexamic Acid-Infused Aligned Electrospun Nanofibers: In Vitro And In Vivo Assessments, Samar A. Salim, Abdullah Elbadry, Eman Gomaa, Mennatullah Faisal, Elbadawy A. Kamoun

Nanotechnology Research Centre

The development of advanced wound dressings capable of accelerating healing and achieving effective hemostasis remains a critical challenge in managing traumatic and surgical wounds. This study reports the fabrication and comprehensive evaluation of a novel multilayered, sandwich-structured nanofiber scaffold composed of Tranexamic acid (TXA), chitosan (CS), polyvinyl alcohol (PVA), L-arginine, and polylactic acid (PLA) for biodegradable wound dressing applications. Using sequential electrospinning, a four-layered scaffold was developed as a smart wound dressing, comprising an immediate-release TXA-CS-PVA layer for rapid clotting, a hydrophobic PLA barrier layer for protection, a sustained-release L-arginine-PVA layer to promote tissue regeneration, and a final PLA protective …

Coumarin/Nitrogen-Bearing Heterocyclic Hybridloaded Electrospun Pmma/Pvp Nanofibrous Scaffolds For Accelerating Topical Wound Healing Rates: Synthesis And In Vitro Bio-Evaluation, Samar A. Salim, Mohamed Ali, Tasneem Abed, El Badawy Kamoun

Nanotechnology Research Centre

Coumarin-nitrogen heterocyclic compounds (e.g. quinoline, acridine, and phthalazine) were synthesized by facile reactions and elucidated by FTIR, 1H, and 13C-NMR analyses, which showed consistency with the expected structures. Coumarin-quinoline (drug A)- and coumarin-acridine (drug B)-loaded electrospun PMMA/PVP nanofibrous scaffolds were fabricated using electrospinning techniques. Results showed a successful PMMA/PVP blend, which formed the matrix that was used as the main scaffold for drug loading/release. The drugs (A and B) were encapsulated within the matrix as verified by IR and SEM results. Bio-evaluation through cytotoxicity and anticancer screening was conducted using the MTT assay against lung fibroblast (Wi-38), colon carcinoma (Caco-2), …

Development Of Gelma-Based Hydrogel Scaffolds With Tunable Mechanical Properties For Applications In Peripheral Nerve Regeneration, Kylie M. Schmitz, Tanner L. Larson, Michael W. Borovich, Xianfang Wu, Geyou Ao, Megan Jack, Liqun Ning

Chemical & Biomedical Engineering Faculty Publications

Peripheral nerve injuries (PNIs) have a significant impact on the quality of life for patients suffering from trauma or disease. In injuries with critical nerve gaps, PN regeneration requires tissue scaffolds with appropriate physiological properties that promote cell growth and functions. Hydrogel scaffolds represent a promising platform for engineering soft tissue constructs that meet key physiological requirements. Nonetheless, ongoing innovation remains essential, as current designs continue to fall short of replicating the functional performance of autografts in bridging critical-sized nerve defects. In this study, gelatin methacrylate (gelMA)-based hydrogels are evaluated to fully characterize their pore structure, compressive stiffness, viscoelasticity, and …

Optimizing Beer Fermentation Through Intelligent Control, Azizbek Nodirbekovich Yusupbekov, Mirjalol Yusupov

Chemical Technology, Control and Management

This paper presents an intelligent control approach for optimizing the beer fermentation process using fuzzy logic and adaptive neuro-fuzzy inference systems. By incorporating multivariable inputs—temperature error and pH deviation—the proposed system effectively handles the nonlinear dynamics and biological variability inherent in fermentation. Simulation results demonstrate improved control accuracy, responsiveness, and robustness compared to conventional methods, making the approach suitable for integration in modern brewery automation systems.

Novel Percutaneous Repair Of Femoral Pseudoaneurysms Using Perclose Proglide™: A Case Series, Ryan Mancoll, Emily Burnett, Nicholas Bandy, Benjamin Samberg, Thomas Cook, Jacob Hoffman, Christopher Murter, Matthew Rossi, David Dexter, Hosam El Sayed, Animesh Rathore Md

Cardiovascular Research Symposium

BACKGROUND - This case series details the novel use of the Perclose ProGlide closure device to successfully repair three separate cases of iatrogenic femoral pseudoaneurysms (PSAs) without attempting other modalities first. Conventional treatment methods of ultrasound-guided compression, duplex-directed thrombin injection (DDTI), or open surgical repair were contraindicated in these patients due to unique anatomy or advanced comorbidities.

METHODS – Details were gathered via a retrospective chart review.

RESULTS - In the first case, a 73-year-old female had an access site PSA off the superficial femoral artery (SFA) with concomitant arteriovenous fistula (AVF) and advanced cardiac disease. The ProGlide device was …

A Pilot Study On Tissue Deformation Using An Integrated Sensor–Actuator Blood Collection Setup In Aquaculture (Salmo Salar), Ishrak Siddiquee, Md Ebne Al Ashad, Ahmed Hasnain Jalal

Electrical and Computer Engineering Faculty Publications

This pilot study presents a sensor–actuator setup designed to evaluate tissue deformation in Atlantic Salmon (Salmo salar) during needle insertion. The system integrates three types of low-cost, commercially available force sensors to capture force profiles and identify biomechanical events associated with tissue layer transitions. Controlled insertions were performed on a deceased specimen, and the resulting force data were analyzed to quantify insertion dynamics and estimate tissue deformation. A simulation model based on the recorded force values was developed to calculate stress distribution and deformation, which ranged from 0.001 µm to 8.4 µm and from 0.3 N/m2 to 4.9 N/m2, respectively. …

Progressive Insights Into 3d Bioprinting For Corneal Tissue Restoration, Ilayda Namli, Deepak Gupta, Yogendra Pratap Singh, Pallab Datta, Muhammad Rizwan, Mehmet Baykara, Ibrahim T. Ozbolat

Michigan Tech Publications

The complex architecture of the cornea, characterized by specifically organized collagen fibrils and distinct cellular layers, poses significant challenges for traditional tissue engineering strategies to replicate its native function. 3D Bioprinting offers a promising solution by enabling the precise, layer-by-layer fabrication of corneal tissues, closely mimicking the essential characteristics needed for vision restoration and long-term graft success. This Review critically examines the key biomechanical, optical, and structural attributes of the cornea necessary for its effective engineering and accurate 3D bioprinting. It provides a comprehensive overview of different 3D bioprinting modalities utilized for corneal tissue engineering and offers insights into potential …

Diffusion Mri Biomarkers For Predicting Treatment Outcomes In Infantile Epileptic Spasms Syndrome With Non-Lesional Mri, Daniel Ackom, Scott A. Beardsley, Jennifer Meylor, Kayleigh Butler, Ricardo Vega, Andrew J.D. Crow, Hema Patel, Brian D. Schmit, Pradeep Javarayee

Biomedical Engineering Faculty Research and Publications

Background

Infantile epileptic spasms syndrome (IESS) is a devastating developmental epileptic encephalopathy (DEE) and patients exhibit diffuse white matter alterations and structural remodeling. However, the correlation between these structural changes and brain network properties, or their effect on the efficacy of treatment outcomes in MRI non-lesional IESS patients is not clear.

Method

This retrospective study was conducted on IESS patients using fixel-based analysis (FBA) of diffusion MRI and graph theory analysis of structural connectivity, involving 26 non-lesional IESS patients aged 2 to 12 months and 120 age-matched controls. We further examined the differences between antiseizure medication (ASM) responders and non-responders …