Biomedical Engineering and Bioengineering Commons^™

Cooperative Relay Selection For Load Balancing With Mobility In Hierarchical Wsns: A Multi-Armed Bandit Approach, Jian Zhang, Jian Tang, Feng Wang

Faculty and Student Publications

© 2013 IEEE. Energy efficiency is the major concern in hierarchical wireless sensor networks(WSNs), where the major energy consumption originates from radios for communication. Due to notable energy expenditure of long-range transmission for cluster members and data aggregation for Cluster Head (CH), saving and balancing energy consumption is a tricky challenge in WSNs. In this paper, we design a CH selection mechanism with a mobile sink (MS) while proposing relay selection algorithms with multi-user multi-armed bandit (UM-MAB) to solve the problem of energy efficiency. According to the definition of node density and residual energy, we propose a conception referred to …

Tuning The Size And Composition Of Manganese Oxide Nanoparticles Through Varying Temperature Ramp And Aging Time, Celia Martinez De La Torre, Jasmine H. Grossman, Andrey A. Bobko, Margaret F. Bennewitz

Faculty & Staff Scholarship

Manganese oxide (MnO) nanoparticles (NPs) can serve as robust pH-sensitive contrast agents for magnetic resonance imaging (MRI) due to Mn2+ release at low pH, which generates a ~30 fold change in T1 relaxivity. Strategies to control NP size, composition, and Mn2+ dissolution rates are essential to improve diagnostic performance of pH-responsive MnO NPs. We are the first to demonstrate that MnO NP size and composition can be tuned by the temperature ramping rate and aging time used during thermal decomposition of manganese(II) acetylacetonate. Two different temperature ramping rates (10°C/min and 20°C/min) were applied to reach 300°C and NPs were aged …

A Mobile Learning Community In A Living Learning Community: Perceived Impact On Digital Fluency And Communication, Devshikha Bose, Krishna Pakala, Lana Grover

Mechanical and Biomedical Engineering Faculty Publications and Presentations

Though mobile devices like smartphones, tablets, and tablet computers have an immense potential for improving student learning, there is little empirical research which reports ways in which students actually use these technologies for learning, especially in fields like Engineering. Based on a social-constructivist approach to learning, the purpose of this mixed methods study was to investigate student perceptions regarding changes in mobile device based digital fluency and communication, after participation in a Living Learning Community (LLC) based Mobile Learning Community. This study contributes to existing literature in the field in that it reports student perceptions of how mobile devices can …

Fluid Dynamics Characterization Of Transcatheter Aortic Valves, Mohammed Barakat

Electronic Theses and Dissertations

Aortic stenosis due to degenerative calcific aortic valvular disease is the most reason for aortic valve replacement in developed countries. Aortic stenosis affects up to 7% of the world population, and current clinical data indicate that the number of the affected people could be triple by 2050, due to population ageing and health lifestyle. Transcatheter aortic valve replacement (TAVR) was introduced as a minimal invasive treatment of severe aortic stenosis. Even though surgical aortic valve replacement (SAVR) is considered the golden standard treatment for severe aortic stenosis patients, TAVR showed equivalent or even superior outcome compare to SAVR. Currently, transcatheter …

Diurnal Patterns Of Gene Expression In The Dorsal Vagal Complex And The Central Nucleus Of The Amygdala - Non-Rhythm-Generating Brain Regions., Mary M Staehle, Sean O'Sullivan, Rajanikanth Vadigepalli, Kate F Kernan, Gregory E Gonye, Babatunde A Ogunnaike, James S Schwaber

Henry M. Rowan College of Engineering Departmental Research

Genes that establish the circadian clock have differential expression with respect to solar time in central and peripheral tissues. Here, we find circadian-time-induced differential expression in a large number of genes not associated with circadian rhythms in two brain regions lacking overt circadian function: the dorsal vagal complex (DVC) and the central nucleus of the amygdala (CeA). These regions primarily engage in autonomic, homeostatic, and emotional regulation. However, we find striking diurnal shifts in gene expression in these regions of male Sprague Dawley rats with no obvious patterns that could be attributed to function or region. These findings have implications …

Investigation Of Physiochemical Properties And Biocompatibility Of Amourphos Calcium Polyphosphate Hydrogel Doped With Antibiotics And Injectable Polymeric Dicalcium Phosphate Dihydrate Bone Cement, Yasaman Chehreghanianzabi

Wayne State University Dissertations

Amorphous calcium polyphosphate (ACPP) is an inorganic polymer ceramic. Here we use a simple method of preparing ACPP hydrogel in the presence of excess volume of water. Essentially, water availability to polyphosphate chains accelerates water molecule ingress and microstructural transformation of ACPP hydrogels. Antibiotic delivery capacity of ACPP hydrogel increases by the specific mixing and molding method, where the VCM has higher antibiotic encapsulation efficiency with the small burst release for the compressed discs. In part of this study, we investigate impact of ACPP hydrogel replacement by monomeric calcium phosphate on the quality of final product (dicalcium phosphate dihydrates (DCPD) …

Is It Time To Give Athletes A Voice In The Dissemination Strategies Of Concussion-Related Information? Exploratory Examination Of 2444 Adolescent Athletes, Mark Beakey, Brian Keenan, Stephen Tiernan, Kieran Collins

Other Resources

Objective: The objective of the research was to screen male and female adolescent athletes on their concussion educational histories and preferred future methods of education in terms of educational messenger, modality, and concussion-related areas of interest.

Design: Cross-sectional survey.

Setting: Examination setting within the classroom.

Participants: Adolescent male (n = 1854) and female (n = 590) athletes aged 12 to 18 years.

Main outcome measures: To explore the concussion educational histories and preferred future methods of education in Irish male and female adolescent athletes.

Results: 19.7% (n = 482) of the sample received education in the past 12 months. Male …

Timcc: On Data Freshness In Privacy-Preserving Incentive Mechanism Design For Continuous Crowdsensing Using Reverse Auction, Xiaoqiang Ma, Weiwei Deng, Feng Wang, Menglan Hu, Fei Chen, Mohammad Mehedi Hassan

Faculty and Student Publications

© 2013 IEEE. As an emerging paradigm that leverages the wisdom and efforts of the crowd, mobile crowdsensing has shown its great potential to collect distributed data. The crowd may incur such costs and risks as energy consumption, memory consumption, and privacy leakage when performing various tasks, so they may not be willing to participate in crowdsensing tasks unless they are well-paid. Hence, a proper privacy-preserving incentive mechanism is of great significance to motivate users to join, which has attracted a lot of research efforts. Most of the existing works regard tasks as one-shot tasks, which may not work very …

Effects Of Fiber Density And Strain Rate On The Mechanical Properties Of Electrospun Polycaprolactone Nanofiber Mats., Adriano A Conte, Katie Sun, Xiao Hu, Vincent Beachley

Henry M. Rowan College of Engineering Departmental Research

This study examines the effects of electrospun polycaprolactone (PCL) fiber density and strain rate on nanofiber mat mechanical properties. An automated track collection system was employed to control fiber number per mat and promote uniform individual fiber properties regardless of the duration of collection. Fiber density is correlated to the mechanical properties of the nanofiber mats. Young's modulus was reduced as fiber density increased, from 14,901 MPa for samples electrospun for 30 s (717 fibers +/- 345) to 3,615 MPa for samples electrospun for 40 min (8,310 fibers +/- 1,904). Ultimate tensile strength (UTS) increased with increasing fiber density, where …

Global Joint Registry: Analysis Of Revision Hip Arthroplasty Data, Alicia M. Runser

Browse all Theses and Dissertations

Total hip arthroplasty (THA) has become well-known as being one of the most successful procedures with much long-term positive clinical results. However, revision surgeries are still required. The four most common failure modes for THAs, “reasons for revision”, are loosening, dislocation or instability, fracture, and infection. The goal of a hip arthroplasty register is to gather information on patients that undergo a total hip arthroplasty and factors pertaining to their surgery which may affect their outcome for future years such as the reason for revision. Analysis of this data can help with the allocation of healthcare funds and the efficacy …

Pwd-3dnet: A Deep Learning-Based Fully-Automated Segmentation Of Multiple Structures On Temporal Bone Ct Scans, Western University, London Health Science Centre

Electrical and Computer Engineering Publications

The temporal bone is a part of the lateral skull surface that contains organs responsible for hearing and balance. Mastering surgery of the temporal bone is challenging because of this complex and microscopic three-dimensional anatomy. Segmentation of intra-temporal anatomy based on computed tomography (CT) images is necessary for applications such as surgical training and rehearsal, amongst others. However, temporal bone segmentation is challenging due to the similar intensities and complicated anatomical relationships among crit- ical structures, undetectable small structures on standard clinical CT, and the amount of time required for manual segmentation. This paper describes a single multi-class deep learning-based …

Fuzzy Controller Algorithm For Automated Hvac Control, M. Chae, K. Kang, D. Koo, S. Oh, Jae Youl Chun

Mechanical and Biomedical Engineering Faculty Publications and Presentations

This research presents the design framework of the artificial intelligent algorithm for an automated building management system. The AI system uses wireless sensor data or IoT (Internet of Things) and user's feedback together. The wireless sensors collect data such as temperature (indoor and outdoor), humidity, light, user occupancy of the facility, and Volatile Organic Compounds (VOC) which is known as the source of the Sick Building Syndrome (SBS) or New Building Syndrome because VOC are often found in new buildings or old buildings with new interior improvement and they can be controlled and reduced by appropriate ventilation efforts. The collected …

Developing A Multifunctional Thermo-Responsive Viral Like Particle (Vlp) Platform With New Physicochemical Characteristics, Sepehr Dejdar

ETD Archive

Smart materials are a class of material whose physical characteristics change significantly in a controllable fashion once exposed to an external stimulus such as stress, pH, light, temperature, etc. If the temperature is the external stimuli (control variable) the material is termed thermo-responsive. Out of numerous thermo-responsive materials, elastin-like polypeptide (ELP) is a well-known protein-based biopolymer. Protein cages are well-defined biological nanostructures which are highly symmetrical and monodisperse. This class of proteins are both chemically and genetically tunable, making them a suitable recipient of new properties. Protein re-engineering is the basis of developing a hybrid platform (e.g. polymer-protein) to deliver …

Development Of Photoacoustic Tomographic Systems For Brain Hemorrhage Detection, Karl Kratkiewicz

Wayne State University Dissertations

Preterm neonates (age) and/or with low birth weight (

Photoacoustic imaging (PAI) is an imaging modality which derives its contrast from differences in optical absorption coefficients of tissue through laser irradiation and acoustic detection. Therefore, PAI derives its signal directly from optical absorbers such as blood; the critical component in a hemorrhage. We discuss operation and processing methods of our Verasonics Vantage system. We then investigate thermal safety of PAI in mouse model for various laser pulse repetitions rates and illumination duration. We then develop two photoacoustic tomographic systems for eventual translation to clinic for hemorrhage detection. One system being …

Spatiotemporal Release Of Growth Factors In A Biomaterial-Focused Organotypic Spinal Cord Injury Model, Elizabeth Mays

Wayne State University Dissertations

Over 17,000 people per year in the United States sustain a spinal cord injury (SCI) for which there is no gold standard of care and life-long complications. SCI is a complex wound environment with various growth factors (GFs), cellular activity, and scar formation at various timepoints. For example, basic fibroblast growth factor (bFGF) is released immediately to protect local support cells, namely oligodendrocytes (OLs). Brain derived neurotrophic factor (BDNF) has peak expression at 2-3 days in mice and 5-7 days in humans, and aids axonal growth across the injury site. Incidentally this is around the same time as M1 macrophage …

In Vitro Atherosclerosis Disease Model Via The Ring Stacking Method, Cameron Brandon Pinnock

Wayne State University Dissertations

Creation of an in vitro atherosclerotic disease model using the novel Ring Stacking Method. Singular self-assembling tissue rings made up smooth muscle cells and fibrin hydrogel are stacked on one another to create a tissue engineered vessel. These biologically engineered blood vessels are then seeded with endothelial cells via combined static rotational and dynamic bioreactor in order to create a functional intima layer. Early stage atherosclerosis was induced via the addition of oxidized low-density lipoproteins (ox-LDL) to the fibrin hydrogel that creates the media layer of the engineered vessel. After the creation of the intima layer the engineered vessel was …

Development Of A Novel Cardiac Ischemia-Reperfusion Model In The Axolotl, Jeremy Tolentino Llaniguez

Wayne State University Dissertations

The Center for Disease Control’s National Center for Health Statistics data for mortality from diseases of the heart show the age-adjusted death rate has fallen from almost 600 deaths in the 1950s to just over 190 deaths per 100,000 U.S. residents today. With the recognized limitations of pharmacotherapy of myocardial infarction (MI), cell-based therapies have been undergoing rapid development and clinical testing. However, there is still no consensus about cell types, delivery routes, dosing and treatment schedules and pretreatment conditioning of cells prior to administration. Furthermore, a fundamental question remains unanswered about the reasons for the poor capacity for myocardial …

Electrochemical Detection Of Reactive Oxygen Species Via A Platinum Microelectrode Array, Victor M. Carriere Jr.

Master's Theses

Oxidative stress, an excess of endogenous or exogenous reactive oxygen species (ROS) in the body, is closely aligned with inflammatory responses. ROS such as hydrogen peroxide, superoxide, and radical hydroxyl ion serve essential functions in fighting infection, but chronic elevation of these species irreversibly damages cellular components. Given the central role of inflammation in a variety of diseases, including Alzheimer’s Disease, atherosclerosis, and rheumatoid arthritis, a low-cost, extracellular, non-invasive assay of ROS is needed.

This work reports the use of a platinum microelectrode array (Pt MEA)-based ceramic probe to detect time- and concentration-dependent variations in hydrogen peroxide (H2O2) production by …

Biotech Connector Brochure

Biotech Connector

The Biotech Connector represents an important opportunity to serve the economic needs of the people of Nebraska through further diversification of Nebraska's economy, and by helping forge and illuminate a pathway to jobs in the biotechnology space for Nebraska students.

The Biotech Connector is 7,700 sq. ft. of well-equipped wet-lab space located on Nebraska Innovation Campus. We provide incubation space and services to bioscience startups and high-growth biotech and research-based businesses.

Wet lab space provides aspiring startups and technology businesses with access to very expensive laboratory equipment that would be outside of the budget of most startups. Lack of access …

Incorporating Cardiac Substructures Into Radiation Therapy For Improved Cardiac Sparing, Eric Daniel Morris

Wayne State University Dissertations

Growing evidence suggests that radiation therapy (RT) doses to the heart and cardiac substructures (CS) are strongly linked to cardiac toxicities, though only the heart is considered clinically. This work aimed to utilize the superior soft-tissue contrast of magnetic resonance (MR) to segment CS, quantify uncertainties in their position, assess their effect on treatment planning and an MR-guided environment.

Automatic substructure segmentation of 12 CS was completed using a novel hybrid MR/computed tomography (CT) atlas method and was improved upon using a 3-dimensional neural network (U-Net) from deep learning. Intra-fraction motion due to respiration was then quantified. The inter-fraction setup …

Computational Analysis Of Oxidative Stress In Endothelial Dysfunction: Insights On The Role Of Tetrahydrobiopterin, Ascorbate And Glutathione, Sheetal Kedar Panday

Wayne State University Dissertations

Oxidative stress and endothelial dysfunction are reported in the cardiovascular and neurovascular diseases. Oxidative stress is caused due to an increase in the generation of reactive oxygen (ROS) and nitrogen species (RNS) and incapacity of antioxidant systems to eliminate ROS and RNS. Endothelial dysfunction is characterized by a reduction in nitric oxide (NO) bioavailability. NO is constitutively produced by enzyme endothelial nitric oxide synthase (eNOS). A reduction in tetrahydrobiopterin (BH4), which is an essential cofactor of eNOS, can lead to eNOS uncoupling. There is complex interplay between the ROS/RNS and antioxidant system underlying pathophysiologies of vascular diseases, however our quantitative …

Nanoparticle-Mediated Controlled Myocardial Drug Delivery: A New Treatment For Hypertrophic Cardiomyopathy, Michelle Katherine Mcgrath Copeland

Bioengineering Dissertations - Archive

Hypertrophic cardiomyopathy (HCM) is a genetic disease of the sarcomere, resulting in overgrowth of the septum that separates the left and right ventricles. HCM can affect as many as 1/200 people, making it the most common genetic cardiomyopathy in the general population, as well as the most common cause of sudden cardiac death (SCD). In severe HCM cases, cardiothoracic surgeons perform septal myectomy to remove the excess tissue. However, many patients are poor surgical candidates and require another, less invasive treatment option. In these cases, alcohol septal ablation (ASA) is performed. With ASA, cardiologists deliver pure alcohol through a catheter …

C-Molecules: Molecular-Guided Surgery With Fluorescence Imaging, Riley Karp, Joshua Gutow, William Wolfe-Mcguire

ENGS 89/90 Reports

Surgeries may cost lives if performed inadequately, which is why tools such as fluorescence guided surgery exist to improve surgical outcomes. Fluorescence guided surgery (FGS) is the practice of injecting patients with a fluorescent molecule that, in combination with highly sensitive cameras, allows surgeons to clearly identify complex biological structures. While beneficial in procedures such as endoscopy and gallbladder surgery, this technique is most notable for its role in complex cancer surgeries where misidentifying the boundaries of a tumor can have deadly consequences. Although FGS has the potential to revolutionize cancer treatment, highly sensitive imaging systems are necessary to identify …

Assessing 3d Printability Of Bioinks, Nicole Ramirez

Honors Undergraduate Theses

The field of tissue engineering (TE) is continuously improving through the use of additive manufacturing techniques (AM) such as three-dimensional (3D) bioprinting. The 3D bioprinter has significantly gained attention in the TE field because it is more efficient than regenerative medicine and is readily available as opposed to organ transplants. Working like a conventional 3D printer, the 3D bioprinter is able to dispense material layer by layer from the bottom up with the printing head able to move in the X, Y, and Z direction. This movement allows for the fabrication of structures with complex geometries. In this study, the …

Evaluation Of Far-Side Occupant Safety Based On Numerical Modeling, Syed Akhtar Imam

Wayne State University Dissertations

The objective of this study was to augment the knowledge of the far-side occupant injury biomechanics in side impact vehicle crashes. Most research studies conducted to investigate the far-side occupant injuries are through the field crash data for a better understanding of human impact responses, injury mechanisms, and injury tolerance levels. The data obtained from field data is also used in the development of injury mitigation technologies, such as safety belts, airbags, etc. A field data represents the injury outcome of an automotive crash, but it doesn’t leave behind enough information for in-depth knowledge. The use of cadaver is the …

Development Of Rat Head Finite Element Model And Tissue Level Biomechanical Threshold For Traumatic Axonal Injury, Runzhou Zhou

Wayne State University Dissertations

Traumatic brain injury (TBI) is caused by local tissue deformation at the time of trauma, leading to neurological dysfunction. In the United States alone, 2.87 million people sustain a TBI each year, of which one-fifth results in death. Traumatic axonal injury (TAI) is a well-recognized consequence of every fatal head injury and more than 85% of vehicular crash-related blunt head injuries. The most common and important pathologic feature of TBIs are multifocal changes to axons in the white matter produced by rapid head acceleration/deceleration during a traumatic event with consequent local shear/tension on neural tissue and axons contributing to secondary …

Biom 4110/6110: The Science Of Medicine (Syllabus), Bradford D. Pendley

Biomedical Engineering Syllabi Archive

Course Description: Integration of fundamental principles from physics, chemistry, biology and mathematics, and applications of these principles to solve problems in medicine.

Brassinosteroids Inhibit Autotropic Root Straightening By Modifying Filamentous-Actin Organization And Dynamics, Louise De Bang, Ana Paez-Garcia, Ashley E. Cannon, Sabrina Chin, Jaydeep Kolape, Fuqi Liao, J. Alan Sparks, Qingzhen Jiang, Elison B. Blancaflor

Nebraska Center for Biotechnology: Faculty and Staff Publications

When positioned horizontally, roots grow down toward the direction of gravity. This phenomenon, called gravitropism, is influenced by most of the major plant hormones including brassinosteroids. Epi-brassinolide (eBL) was previously shown to enhance root gravitropism, a phenomenon similar to the response of roots exposed to the actin inhibitor, latrunculin B (LatB). This led us to hypothesize that eBL might enhance root gravitropism through its effects on filamentous-actin (F-actin). This hypothesis was tested by comparing gravitropic responses of maize (Zea mays) roots treated with eBL or LatB. LatB- and eBL-treated roots displayed similar enhanced downward growth compared with controls …

Functional Characterization Of Petiolule-Like Pulvinus (Plp) Gene In Abscission Zone Development In Medicago Truncatula And Its Application To Genetic Improvement Of Alfalfa, Juan Du, Shaoyun Lu, Maofeng Chai, Chuanen Zhou, Liang Sun, Yuhong Tang, Jin Nakashima, Jaydeep Kolape, Zhaozhu Wen, Marjan Behzadirad, Tianxiu Zhong, Juan Sun, Yunwei Zhang, Zeng-Yu Wang

Nebraska Center for Biotechnology: Faculty and Staff Publications

Alfalfa (Medicago sativa L.) is one of the most important forage crops throughout the world. Maximizing leaf retention during the haymaking process is critical for achieving superior hay quality and maintaining biomass yield. Leaf abscission process affects leaf retention. Previous studies have largely focused on the molecular mechanisms of floral organ, pedicel and seed abscission but scarcely touched on leaf and petiole abscission. This study focuses on leaf and petiole abscission in the model legume Medicago truncatula and its closely related commercial species alfalfa. By analysing the petiolule-like pulvinus (plp) mutant in M. truncatula at phenotypic level (breakstrength and …

Biom 3110: Medical Physiology (Syllabus), Bradford D. Pendley

Biomedical Engineering Syllabi Archive

Course Description: Basic principles of human physiology and how these are applied in medicine and biomedical engineering problem and devices; physiological principles using appropriate mathematical and engineering models to construct an understanding of how the body works as an integrated system.