Engineering Commons^™

Transgenic Rat Model Of Neurodegeneration Caused By Mutation In The Tdp Gene, Hongxia Zhou, Cao Huang, Han Chen, Dian Wang, Carlisle P. Landel, Pedro Yuxing Xia, Robert Bowser, Yong-Jian Liu, Xu Gang Xia

Nebraska Center for Biotechnology: Faculty and Staff Publications

TDP-43 proteinopathies have been observed in a wide range of neurodegenerative diseases. Mutations in the gene encoding TDP-43 (i.e., TDP) have been identified in amyotrophic lateral sclerosis (ALS) and in frontotemporal lobe degeneration associated with motor neuron disease. To study the consequences of TDP mutation in an intact system, we created transgenic rats expressing normal human TDP or a mutant form of human TDP with a M337V substitution. Overexpression of mutant, but not normal, TDP caused widespread neurodegeneration that predominantly affected the motor system. TDP mutation reproduced ALS phenotypes in transgenic rats, as seen by progressive degeneration of motor neurons …

Investigating An Optimal Decision Point For Probability Bounds Analysis Models When Used To Estimate Remedial Soil Volumes Under Uncertainty At Hazardous Waste Sites, Charles O. Dankwah

Walden Dissertations and Doctoral Studies

Hazardous waste site remediation cost estimation requires a good estimate of the contaminated soil volume. The United States Environmental Protection Agency (U.S. EPA) currently uses deterministic point values to estimate soil volumes but the literature suggests that probability bounds analysis (PBA) is the more accurate method to make estimates under uncertainty. The underlying statistical theory is that they are more accurate than deterministic estimates because probabilistic estimates account for data uncertainties. However, the literature does not address the problem of selecting an optimal decision point from the interval-valued PBA estimates. The purpose of this study was to identify the optimal …

Integrated Circuit Implementation For A Gan Hfet Driver Circuit, Bo Wang, Jason D. Bakos, Antonello Monti

Faculty Publications

This paper presents the design and implementation of a new integrated circuit (IC) that is suitable for driving the new generation of high-frequency GaN HFETs. The circuit, based upon a resonant switching transition technique, is first briefly described and then discussed in detail, focusing on the design process practical considerations. A new level-shifter topology, used to generate the zero and negative gate-source voltages required to switch the GaN HFET, is introduced and analyzed. The experimental measurements included in this paper report the results of tests carried out on an IC designed and fabricated as part of the multiproject die in …

Quantifying Individual Potential Contributions Of The Hybrid Sulfur Electrolyzer, John A. Staser, Maximilian B. Gorensek, John W. Weidner

Faculty Publications

The hybrid sulfur cycle has been investigated as a means to produce clean hydrogen efficiently on a large scale by first decomposing H₂SO₄ to SO₂, O₂, and H₂O and then electrochemically oxidizing SO₂ back to H₂SO₄ with the cogeneration of H₂. Thus far, it has been determined that the total cell potential for the hybrid sulfur electrolyzer is controlled mainly by water transport in the cell. Water is required at the anode to participate in the oxidation of SO₂ to H₂SO_{4 …}

The Impact Of Task Conflict On Virtual Team Performance And Cohesiveness, Wilawan Onkman, Anil Ustun, Pilar Pazos, Ana Maria Canto

Engineering Management & Systems Engineering Faculty Publications

This paper examined the impact of task conflict on team performance and cohesiveness. Twelve virtual teams participated in two sessions with two difficulty levels. Each task consisted of a survival simulation. Teams communicated using a text-based communication media (chat). A mixed methods approach combining both quantitative and qualitative data was used. Performance was measured using expert ratings, and cohesiveness was measured using a modified version of Seashore's Cohesiveness Index. Content analysis was utilized to evaluate the level of task conflict on the team. This study provides some initial evidence on the effects task conflict on virtual team performance.

A Novel Far-Field Nanoscopic Velocimetry For Nanofluidics, C. Kuang, Guiren Wang

Faculty Publications

For the first time we have been able to measure the flow velocity profile for nanofluidics with a spatial resolution better than 70 nm. Due to the diffraction resolution barrier, traditional optical methods have so far failed in measuring the velocity profile in a nanocapillary or a closed nanochannel without an opened sidewall. A novel optical point measurement method is presented which applies stimulated emission depletion (STED) microscopy to laser induced fluorescence photobleaching anemometer (LIFPA) techniques to measure flow velocity. Herein we demonstrate this far-field nanoscopic velocimetry method by measuring the velocity profile in a nanocapillary with an inner diameter …

An Efficient Electrochemical–Thermal Model For A Lithium-Ion Cell By Using The Proper Orthogonal Decomposition Method, Long Cai, Ralph E. White

Faculty Publications

The proper orthogonal decomposition method was applied to develop an efficient, reduced order electrochemical–thermal model for a lithium-ion cell. This model was validated for discharge simulations over a wide range of C rates and various cooling conditions of the cell. The reduced order model agrees well with the COMSOL model, a commercial finite element method solver, and requires times less computation time than the COMSOL model. The model predictions indicate that the discharge time or percent of capacity removed from the cell at an end of discharge voltage of 3.0 V depends on the rate of the discharge and heat …

Maximizing The Life Of A Lithium-Ion Cell By Optimization Of Charging Rates, Saeed Khaleghi Rahimian, Sean Rayman, Ralph E. White

Faculty Publications

Using a dynamic optimization method, the optimum charge currents as a function of cycle number during cycling for the lithium-ion cell are obtained. A single particle physics-based model, which includes capacity fade, was applied to simulate the cell performance under low earth-orbit (LEO) cycling conditions. Useful cell life is defined as the number of cycles before the end of discharge voltage drops below 3.0 V or the cell discharge capacity becomes less than 20% of the original discharge capacity. The simulated useful cell life can be increased by ∼29.28% by varying the charge current.

Theoretical Analysis Of Stresses In A Lithium Ion Cell, Sindhuja Renganathan, Godfrey Sikha, Shriram Santhanagopalan, Ralph E. White

Faculty Publications

A mathematical model to simulate the generation of mechanical stress during the discharge process in a dual porous insertion electrode cell sandwich comprised of lithium cobalt oxide and carbon is presented. The model attributes stress buildup within intercalation electrodes to two different aspects: changes in the lattice volume due to intercalation and phase transformation during the charge/discharge process. The model is used to predict the influence of cell design parameters such as thickness, porosity, and particle size of the electrodes on the magnitude of stress generation. The model developed in this study can be used to understand the mechanical degradation …

Multimetallic Electrocatalysts Of Pt, Ru, And Ir Supported On Anatase And Rutile Tio2 For Oxygen Evolution In An Acid Environment, Roderick E. Fuentes, Jake Farell, John W. Weidner

Faculty Publications

Anatase and rutile TiO2 were investigated as stable supports for different multimetallic nanoparticles (i.e., Pt:Ru, Pt:Ir, Pt:Ru:Ir, and Ir:Ru) and tested for activity toward the oxygen evolution reaction (OER). Overall, Ir:Ru had the highest activity toward OER (i.e., current per gram of metal) compared to the other multimetallic combinations studied. This bimetallic supported on anatase TiO2 had a 53% higher current per gram of metal than an unsupported electrocatalyst of the same composition. The higher catalyst utilization of the supported electrocatalysts for OER is consistent with small, well-dispersed nanoparticles, which were observed in high resolution transmission electron microscopy images.

Mesoporous Tin Oxide As An Oxidation-Resistant Catalyst Support For Proton Exchange Membrane Fuel Cells, Peng Zhang, Sheng-Yang Huang, Branko N. Popov

Faculty Publications

Mesoporous catalyst support based on tin oxide (SnO₂) is synthesized with high surface area of 205 m² g⁻¹ and with narrow pore size distribution. Modified polyol method is used to deposit platinum on SnO₂. The physical properties of the support and the SnO₂-supported Pt catalyst (Pt/SnO₂) are characterized by using the Brunauer, Emmett, and Teller method, X-ray diffraction, and transmission electron microscopy. The electrochemical stability and durability of the Pt/SnO₂ catalyst are investigated by the accelerated stress tests proposed by the U.S. Department of Energy. Pt/SnO₂ catalyst exhibits …

Genome3d: A Viewer-Model Framework For Integrating And Visualizing Multi-Scale Epigenomic Information Within A Three-Dimensional Genome, Thomas M. Asbury, Matt Mitman, Jijun Tang, W. Jim Zheng

Faculty Publications

Background
New technologies are enabling the measurement of many types of genomic and epigenomic information at scales ranging from the atomic to nuclear. Much of this new data is increasingly structural in nature, and is often difficult to coordinate with other data sets. There is a legitimate need for integrating and visualizing these disparate data sets to reveal structural relationships not apparent when looking at these data in isolation.

Results
We have applied object-oriented technology to develop a downloadable visualization tool, Genome3D, for integrating and displaying epigenomic data within a prescribed three-dimensional physical model of the human genome. In order …

Understanding Materials, Petros J. Katsioloudis

STEMPS Faculty Publications

The article discusses the importance of understanding the characteristics of materials that will be used for different applications. Through the years, the inventions and innovations in the technology of materials are becoming more technologically complex. Innovations in the materials are divided in different categories, including metals, ceramics, polymers and composites. Example of such innovations in the technology of materials include the ceramic composite applied to the surface of the space shuttle panels to absorb and release high amounts of heat.

Cytocompatible Cross-Linking Of Electrospun Zein Fibers For The Development Of Water-Stable Tissue Engineering Scaffolds, Quiran Jiang, Narendra Reddy, Yiqi Yang

Department of Agricultural and Biological Systems Engineering: Faculty Publications

This paper reports a new method of cross-linking electrospun zein fibers using citric acid as a non-toxic cross-linker to enhance the water stability and cytocompatibility of zein fibers for tissue engineering and other medical applications. The electrospun structure has many advantages over other types of structures and protein-based biomaterials possess unique properties preferred for tissue engineering and other medical applications. However, ultrafine fiber matrices developed from proteins have poor mechanical properties and morphological stability in the aqueous environments required for medical applications. Efforts have been made to improve the water stability of electrospun protein scaffolds using cross-linking and other approaches, …

Microwave-Based Alkali Pretreatment Of Switchgrass And Coastal Bermudagrass For Bioethanol Production, Deepak R. Keshwani, Jay J. Cheng

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Switchgrass and coastal bermudagrass are promising lignocellulosic feedstocks for bioethanol production. However, pretreatment of lignocelluloses is required to improve production of fermentable sugars from enzymatic hydrolysis. Microwave-based alkali pretreatment of switchgrass and coastal bermudagrass was investigated in this study. Pretreatments were carried out by immersing the biomass in dilute alkali reagents and exposing the slurry to microwave radiation at 250 W for residence times ranging from 5 to 20 minutes. Simons’ stain method was used to quantify changes in biomass porosity as a result of the pretreatment. Pretreatments were evaluated based on yields of total reducing sugars, glucose, and xylose. …

Preferential Flow Effects On Subsurface Contaminant Transport In Alluvial Floodplains, Derek M. Heeren, Ron B. Miller, Garey A. Fox, Daniel E. Storm, Todd Halihan, Chad J. Penn

Department of Agricultural and Biological Systems Engineering: Faculty Publications

For sorbing contaminants, transport from upland areas to surface water systems is typically considered to be due to surface runoff, with negligible input from subsurface transport assumed. However, certain conditions can lead to an environment where subsurface transport to streams may be significant. The Ozark region, including parts of Oklahoma, Arkansas, and Missouri, is one such environment, characterized by cherty, gravelly soils and gravel bed streams. Previous research identified a preferential flow path (PFP) at an Ozark floodplain along the Barren Fork Creek in northeastern Oklahoma and demonstrated that even a sorbing contaminant, i.e., phosphorus, can be transported in significant …

Net Radiation Dynamics: Performance Of 20 Daily Net Radiation Models As Related To Model Structure And Intricacy In Two Climates, Suat Irmak, Denis Mutiibwa, José O. Payero

Department of Agricultural and Biological Systems Engineering: Faculty Publications

We compared daily net radiation (R_n) estimates from 19 methods with the ASCE‐EWRI R_n estimates in two climates: Clay Center, Nebraska (sub‐humid) and Davis, California (semi‐arid) for the calendar year. The performances of all 20 methods, including the ASCE‐EWRI R_n method, were then evaluated against R_n data measured over a non‐stressed maize canopy during two growing seasons in 2005 and 2006 at Clay Center. Methods differ in terms of inputs, structure, and equation intricacy. Most methods differ in estimating the cloudiness factor, emissivity (α), and calculating net longwave radiation (R_nl). All methods use …

Nebraska Agricultural Water Management Demonstration Network (Nawmdn): Integrating Research And Extension/Outreach, Suat Irmak, Jennifer M. Rees, Gary L. Zoubek, Brandy S. Van Dewalle, William R. Rathje, Rodney Debuhr, Dan Leininger, Darrel D. Siekman, James W. Schneider, Andrew P. Christiansen

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Maximizing the net benefits of irrigated plant production through appropriately designed agricultural water management programs is of growing importance in Nebraska, and other western and Midwestern states, because many areas are involved in management and policy changes to conserve irrigation water. In Nebraska, farmers are being challenged to practice conservation methods and use water resources more efficiently while meeting plant water requirements and maintaining high yields. Another challenge Nebraska experiences in it's approximately 3.5‐million‐ha irrigated lands is limited adoption of newer technologies/tools to help farmers better manage irrigation, conserve water and energy, and increase plant water use efficiency. In 2005, …

Organic Particulate Matter Formation At Varying Relative Humidity Using Surrogate Secondary And Primary Organic Compounds With Activity Corrections In The Condensed Phase Obtained Using A Method Based On The Wilson Equation, James F. Pankow, E. I. Chang

Civil and Environmental Engineering Faculty Publications and Presentations

Secondary organic aerosol (SOA) formation in the atmosphere is currently often modeled using a multiple lumped "two-product" (N · 2p) approach. The N · 2p approach neglects: 1) variation of activity coefficient (i) values and mean molecular weight MW in the particulate matter (PM) phase; 2) water uptake into the PM; and 3) the possibility of phase separation in the PM. This study considers these effects by adopting an (N ·2p)pMW, approach (is a phase index). Specific chemical structures are assigned to 25 lumped SOA compounds and to 15 representative primary organic aerosol (POA) compounds to allow calculation of i …

A Survey Of China's Logistics Industry And The Impacts Of Transport Delays On Importers And Exporters, Zeyan Zhang, Miguel Andres Figliozzi

Civil and Environmental Engineering Faculty Publications and Presentations

In the last decades, China?s booming economy has greatly benefited from globalization and trade liberalization. China has found a niche as the world?s manufacturing centre and it is playing a crucial role in a growing number of global supply chains. This research focuses on the performance of international and domestic transport and logistics systems as perceived by Chinese importers and exporters. A broad literature review of Chinese meteoric logistics industry development is provided. Results and analysis of in?depth interviews with Chinese importers and exporters are presented. These interviews provide significant information regarding international freight transport chains, the impact of delays …

Depth And Breakthrough Detection For Laser Machining, J. P. Quitter, C. E. Yaworsky, Hai-Lung Tsai

Mechanical and Aerospace Engineering Faculty Research & Creative Works

A system comprises a working laser beam, a sensing laser beam, first and second optical elements, an optical sensor, an aperture and a controller. The first optical element generates a coaxial beam from the working laser beam and the sensing laser beam. The second optical element focuses the coaxial beam onto a workpiece, such that the working laser beam machines the workpiece and the sensing laser beam reflects from the workpiece. The optical sensor senses an intensity of the reflected sensing beam. The aperture determines a focus position by translating along the reflected sensing beam, such that the reflected intensity …

Synthesis And Characterization Of A [Ru(Bpy)2(Ncs)2] Derivative For Use As A Dye-Sensitizer In Nanocrystalline Solar Cells, Joel Thomas Kirner

Honors Program Theses

After extensive review of the field of dye-sensitized solar cells, the molecule [Ru(4,4’- dicarboxy-2,2’-bipyridine)(4,4’-di-(2-(2-pyridyl)ethenyl)-2,2’-bipyridine)(NCS)2] has been designed as an original contribution to the field. This dye sensitizer was chosen by derivatizing upon the structure of the standard sensitizer, cis-diisothiocyanatobis(4,4’-dicarboxylic acid-2,2’- bipyridine)ruthenium(II) (N3), by extending the conjugation of one bipyridine ligand. This structural derivatization should enhance light harvesting by red-shifting the dye’s absorbance and increasing the dye’s molar absorptivity, which should result in a dye-sensitized solar cell with higher efficiency. The Density Functional Theory (DFT) molecular orbital calculations of the new dye complex indicate that the HOMO is highly localized …

Improved Method For The Determination Of Kinetic Parameters From Non-Isothermal Thermogravimetric Analysis (Tga) Data, Thomas H. Fletcher, James L. Hillier, Trent Bezzant

Faculty Publications

Thermogravimetric analysis (TGA) at a constant heating rate is a popular technique for characterizing reaction behavior. Determination of kinetic coefficients from suchTGAdata has given rise to a large range of reported activation energies for similar samples. In general, rate coefficients are determined using either a linearized integral method or a derivative method. A new method incorporating several well-known techniques is presented that avoids the problems with the linearized techniques as they are generally used. This paper compares results from the new method with results using either the integral or derivative method. Mathematically generated data were used with known kinetic parameters …

Robust Dynamic Balance Of Ap-1 Transcription Factors In A Neuronal Gene Regulatory Network., Gregory M Miller, Babatunde A Ogunnaike, James S Schwaber, Rajanikanth Vadigepalli

Department of Pathology, Anatomy, and Cell Biology Faculty Papers

BACKGROUND: The octapeptide Angiotensin II is a key hormone that acts via its receptor AT1R in the brainstem to modulate the blood pressure control circuits and thus plays a central role in the cardiac and respiratory homeostasis. This modulation occurs via activation of a complex network of signaling proteins and transcription factors, leading to changes in levels of key genes and proteins. AT1R initiated activity in the nucleus tractus solitarius (NTS), which regulates blood pressure, has been the subject of extensive molecular analysis. But the adaptive network interactions in the NTS response to AT1R, plausibly related to the development of …

Compact Survey And Inspection Day/Night Image Sensor Suite For Small Unmanned Aircraft Systems (Eyepod), Alan Bird, Scott A. Anderson, Dale Linne Von Berg, Morgan Davidson, Niel Holt, Melvin Kruer, Michael L. Wilson

Space Dynamics Laboratory Publications

EyePod is a compact survey and inspection day/night imaging sensor suite for small unmanned aircraft systems (UAS). EyePod generates georeferenced image products in real-time from visible near infrared (VNIR) and long wave infrared (LWIR) imaging sensors and was developed under the ONR funded FEATHAR (Fusion, Exploitation, Algorithms, and Targeting for High-Altitude Reconnaissance) program. FEATHAR is being directed and executed by the Naval Research Laboratory (NRL) in conjunction with the Space Dynamics Laboratory (SDL) and FEATHAR’s goal is to develop and test new tactical sensor systems specifically designed for small manned and unmanned platforms (payload weight < 50 lbs). The EyePod suite consists of two VNIR/LWIR (day/night) gimbaled sensors that, combined, provide broad area survey and focused inspection capabilities. Each EyePod sensor pairs an HD visible EO sensor with a LWIR bolometric imager providing precision geo-referenced and fully digital EO/IR NITFS output imagery. The LWIR sensor is mounted to a patent-pending jitter-reduction stage to correct for the high-frequency motion typically found on small aircraft and unmanned systems. Details will be presented on both the wide-area and inspection EyePod sensor systems, their modes of operation, and results from recent flight demonstrations.

Exceed Ii: Advanced Training For Even Better Teaching, Debra Larson, Allen Estes, Norman Dennis, Ronald Welch, Carol Considine

Engineering Technology Faculty Publications

In 2007, the American Society of Civil Engineering's Committee on Faculty Development (CFD) conducted a longitudinal survey of all the past participants of the ExCEEd Teaching Workshop (ETW). The CFD received 173 responses, representing 40% of the ETW population at that time, to its survey about skills and the long term value of ETW. Important to this paper, 73% of the survey respondents said that they were interested in attending a post, advanced ETW. Motivated by these survey results, the CFD began its planning for a pilot ExCEEd II workshop during the 2008-2009 academic year. In the summer of 2009, …

Use Of A Segmented Electrode To Control Current Distribution In Electrochemical Systems, Barry Van Tassell

Dissertations and Theses

"The goal of this project was to investigate the use of segmented electrodes to control the current distribution through an electrochemical cell. To achieve this goal, the project was separated into two parts, designing a scalable piece of hardware that could create a current distribution, and then using that hardware to create noticeable changes in a system by changing the current distribution within the system. Prior to building the current distribution device, a basic 3-electrode galvanostat was built in order to test its fundamental design characteristics. The design stressed a simplistic hardware, relying on software to control the current. A …

A Methodology To Stabilize The Supply Chain, Alfonso Sarmiento

Electronic Theses and Dissertations

In today's world, supply chains are facing market dynamics dominated by strong global competition, high labor costs, shorter product life cycles, and environmental regulations. Supply chains have evolved to keep pace with the rapid growth in these business dynamics, becoming longer and more complex. As a result, supply chains are systems with a great number of network connections among their multiple components. The interactions of the network components with respect to each other and the environment cause these systems to behave in a highly nonlinear dynamic manner. Ripple effects that have a huge, negative impact on the behavior of the …

Thermal Detection Of Biomarkers Using Phase Change Nanoparticles, Chaoming Wang

Electronic Theses and Dissertations

Most of existing techniques cannot be used to detect molecular biomarkers (i.e., protein and DNA) contained in complex body fluids due to issues such as enzyme inhibition or signal interference. This thesis describes a nanoparticle-based thermal detection method for the highly sensitive detections of multiple DNA biomarkers or proteins contained in different type of fluids such as buffer solution, cell lysate and milk by using solid-liquid phase change nanoparticles as thermal barcodes. Besides, this method has also been applied for thrombin detection by using RNA aptamer-functionalized phase change nanoparticles as thermal probes. Furthermore, using nanostructured Si surface that have higher …

The Development Of Scalable Pump Techniques For Gg Iag Fiber Lasers And Passive Athermalization Techniques For Solid State Laser, William Hageman

Electronic Theses and Dissertations

This dissertation consists of two parts: research pertaining to the development of scalable pump techniques for gain guided index-antiguided fiber lasers and research relating to the development of passive athermalization schemes for solid state lasers. The first section primarily details the development of a side pump scheme that allows for power scaling of gain-guided index anti-guided fibers. While these fibers have been demonstrated in past research, none have used a pump technology capable of pumping with the efficiencies, uniformity, and necessary length to allow for scaling of the fiber lasers to high output powers. The side pumped scheme developed in …