Engineering Commons^™

Protein Adsorption On And Swelling Of Polyelectrolyte Brushes: A Simultaneous Ellipsometry-Quartz Crystal Microbalance Study, Eva Bittrich, Keith B. Rodenhausen Jr., Klaus-Jochen Eichhorn, Tino Hofmann, Mathias Schubert, Manfred Stamm, Petra Uhlmann

Department of Electrical and Computer Engineering: Faculty Publications

With a coupled spectroscopic ellipsometry-quartz crystal microbalance with dissipation (QCM-D) experimental setup, quantitative information can be obtained about the amount of buffer components (water molecules and ions) coupled to a poly(acrylic acid) (PAA) brush surface in swelling and protein adsorption processes. PAA Guiselin brushes with more than one anchoring point per single polymer chain were prepared. For the swollen brushes a high amount of buffer was found to be coupled to the brush-solution interface in addition to the content of buffer inside the brush layer. Upon adsorption of bovine serum albumin the further incorporation of buffer molecules into the protein-brush …

Tob1 Is A Constitutively Expressed Repressor Of Liver Regeneration, Karen J. Ho, Nhue L. Do, Hasan H. Otu, Martin J. Dib, Xianghui Ren, Keiichi Enjyoji, Simon C. Robson, Ernest F. Terwilliger, Seth J. Karp

Department of Electrical and Computer Engineering: Faculty Publications

How proliferative and inhibitory signals integrate to control liver regeneration remains poorly understood. A screen for antiproliferative factors repressed after liver injury identified transducer of ErbB2.1 (Tob1), a member of the PC3/BTG1 family of mito-inhibitory molecules as a target for further evaluation. Tob1 protein decreases after 2/3 hepatectomy in mice secondary to posttranscriptional mechanisms. Deletion of Tob1 increases hepatocyte proliferation and accelerates restoration of liver mass after hepatectomy. Down-regulation of Tob1 is required for normal liver regeneration, and Tob1 controls hepatocyte proliferation in a dose-dependent fashion. Tob1 associates directly with both Caf1 and cyclindependent kinase (Cdk) 1 and …

Iterative Signal Processing In Communications, Christian Schlegel, Peter Hoeher, Owe Axelsson, Lance C. Pérez

Department of Electrical and Computer Engineering: Faculty Publications

Iterative signal processing in communications has experienced an explosive rise in popularity in recent years. The catalytic origins of this paradigm-shifting new philosophy among communications experts can be traced to the invention of turbo coding, and the subsequent rediscovery of low-density parity check (LDPC) coding, both in the field of error control coding. Both systems rely on iterative decoding algorithms to achieve their astounding performance. However, iterative signal processing is not confined to the decoding of error control codes and rather quickly spread to many other possible applications. The purpose of this special issue is to examine the concept of …

The Manifestation Of Stopping Sets And Absorbing Sets As Deviations On The Computation Trees Of Ldpc Codes, Eric T. Psota, Lance C. Perez

Department of Electrical and Computer Engineering: Faculty Publications

The error mechanisms of iterative message-passing decoders for low-density parity-check codes are studied. A tutorial review is given of the various graphical structures, including trapping sets, stopping sets, and absorbing sets that are frequently used to characterize the errors observed in simulations of iterative decoding of low-density parity-check codes. The connections between trapping sets and deviations on computation trees are explored in depth using the notion of problematic trapping sets in order to bridge the experimental and analytic approaches to these error mechanisms. A new iterative algorithm for finding low-weight problematic trapping sets is presented and shown to be capable …

Mimo Self-Encoded Spread Spectrum With Iterative Detection Over Rayleigh Fading Channels, Shichuan Ma, Lim Nguyen, Won Mee Jang, Yaoqing (Lamar) Yang

Department of Electrical and Computer Engineering: Faculty Publications

Self-encoded spread spectrum (SESS) is a novel communication technique that derives its spreading code from the randomness of the source stream rather than using conventional pseudorandom noise (PN) code. In this paper, we propose to incorporate SESS in multiple-input multiple-output (MIMO) systems as a means to combat against fading effects in wireless channels. Orthogonal space-time block-coded MIMO technique is employed to achieve spatial diversity, and the inherent temporal diversity in SESS modulation is exploited with iterative detection. Simulation results demonstrate that MIMO-SESS can effectively mitigate the channel fading effect such that the system can achieve a bit error rate of …

Quantitative Evaluation Of The Bim-Assisted Construction Detailed Cost Estimates, Zhigang Shen, Raja R. A. Issa

Department of Construction Engineering and Management: Faculty Publications

The increased interest in using Building Information Modeling (BIM) in detailed construction cost estimates calls for methodologies to evaluate the effectiveness of BIM-Assisted Detailed Estimating (BADE) tools in generating detailed construction cost estimates. The focus of this study is on developing a quantified evaluation method to measure the impact of these BADE tools. Further, in order to understand the cognitive details of the estimator, this study also tested and evaluated the impact of the visualization factor and the compound impact of the visualization factor and aggregated calculation factor on the construction cost-estimating process. Two types of BADE tools were tested …

Studies Of Dynamic Crack Propagation And Crack Branching With Peridynamics, Youn Doh Ha, Florin Bobaru

Department of Engineering Mechanics: Faculty Publications

In this paper we discuss the peridynamic analysis of dynamic crack branching in brittle materials and show results of convergence studies under uniform grid refinement (m-convergence) and under decreasing the peridynamic horizon (δ-convergence). Comparisons with experimentally obtained values are made for the crack-tip propagation speed with three different peridynamic horizons.We also analyze the influence of the particular shape of themicro-modulus function and of different materials (Duran 50 glass and soda-lime glass) on the crack propagation behavior. We show that the peridynamic solution for this problem captures all the main features, observed experimentally, of dynamic crack propagation and branching, as well …

Missouri River Recovery Program Emergent Sandbar Habitat Complexes In The Missouri River, Nebraska And South Dakota, Draft Project Implementation Report (Pir) With Integrated Environmental Assessment

United States Army Corps of Engineers, Omaha District

The Missouri River Recovery Program (MRRP) was developed to address actions included in the U.S. Fish & Wildlife Service (USFWS) 2000 and 2003 Amended Biological Opinions (BiOp) on the Operation of the Missouri River System and the Missouri River Bank Stabilization and Navigation Fish and Wildlife Mitigation Project (Mitigation Project) authorized by the Water Resources Development Acts of 1986 and 1999 (WRDA86 and WRDA99). The BiOp and Mitigation Project provide authority and direction to complete projects for fish and wildlife habitat along Missouri River. These actions are being undertaken to address endangered species needs and mitigate for the loss of …

Draft Programmatic Environmental Impact Statement For The Mechanical Creation And Maintenance Of Emergent Sandbar Habitat In The Riverine Segments Of The Upper Missouri River, Vol. 1 And 2

United States Army Corps of Engineers, Omaha District

This Draft Programmatic Environmental Impact Statement (PEIS) analyzes the potential environmental consequences of implementing the Emergent Sandbar Habitat (ESH) program on the Upper Missouri River. The purpose of the ESH program is to support least tern and piping plover populations on the Missouri River by supplementing natural habitat through the mechanical creation and replacement of ESH. The PEIS allows the public, cooperating agencies (the U.S. Fish and Wildlife Service (USFWS) and the National Park Service (NPS)), and Corps decision makers to compare impacts among a range of alternatives. The PEIS is meant to inform the selection of a preferred alternative …

Missouri River Recovery Program: Integrated Science Program General Science Questions & Key Findings

United States Army Corps of Engineers, Omaha District

I.

What is the population of pallid sturgeon in the Missouri River and its tributaries? .....5
1. What are the population trends over time? ...........................5

II.

Is propagation a viable short-term solution to augment pallid sturgeon populations?
2. Can pallid sturgeon be propagated?......................................6
3. Will stocked fish survive in the river? .....................................6
4. Will stocked fish spawn in the river?........................................7
5. What is the appropriate level of stocking?................................7

III.

Do pallid sturgeon spawn in the Missouri River? ..........................7
6. Where are the locations of spawning sites? .............................7
7. What is the timing of the spawn?...........................................8
8. What are the cues …

Missouri River Recovery Program Sandy Point Bend Shallow Water Habitat Construction Project Draft Project Implementation Report May 2010

United States Army Corps of Engineers, Omaha District

The Missouri River Recovery Program (MRRP) was developed by the U.S. Army Corps of Engineers, Omaha District (Corps) to address actions included in the 2000 and 2003 Amended Biological Opinions (BiOp) on the Operation of the Missouri River System and the Missouri River Bank Stabilization and Navigation Fish and Wildlife Mitigation Project (Mitigation Project) authorized by the Water Resources Development Acts of 1986 and 1999 (WRDA86 and WRDA99). The BiOp and Mitigation Project provide direction and authority to complete projects that provide fish and wildlife habitat along Missouri River. These actions are being undertaken to address endangered species needs and …

Finite Element Analysis Of Cracks In Aging Aircraft Structures With Bonded Composite-Patch Repairs, Linxia Gu, Ananth Ram Mahanth Kasavajhala, Shijia Zhao

Department of Mechanical and Materials Engineering: Faculty Publications

Bonded composite-patch repair has been used to transfer load from cracked structures to the reinforcement such that subsequent crack propagation is reduced. In this study,the mechanical behavior of a single edge v-notch A17075-T6 plate repaired with 1-ply and 4-ply composite patches was investigated through the finite element method. Contour integral method was used to define and evaluate the stress intensity factors at the crack tip. The effect of the adhesive epoxy film, patch material, thickness and ply orientations on the evolution of the stress intensity factor (SIF) of the repaired structure was examined. The results indicated that the SIF of …

Thermal Models Of Railroad Wheels And Bearings, Kevin D. Cole, Constantine M. Tarawneh, Arturo A. Fuentes, B. M. Wilson, L. Navarro

Department of Mechanical and Materials Engineering: Faculty Publications

The rolling surface for railroad wheels can be a heat source that may have an impact on the performance of the wheel bearing. In this study, experimental data from an electrically-heated railroad wheel set is analyzed by constructing thermal models of the wheel set. A steady finite-element model, a steady-analytical model, and a transient lumped-parameter model are discussed. Model parameters are determined from careful comparisons with the experimental data. The lumped-parameter model given here is intended as a simple predictive tool for determining when wheel heating caused by rail operations will have an impact on bearing temperature. The model parameters …

Effect Of Magnetron Frequency On Heating Pattern In Domestic Oven, Sohan Birla, Krishnamoorthy Pitchai, Jeyamkondan Subbiah, David D. Jones

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

In this study a computer model was developed to simulate microwave heating of a model food with a range of magnetron frequencies. The range was decided upon performing the frequency spectrum analysis of microwave leakage from the microwave oven. Simulation results showed that the magnetron input as sinusoidal frequency from 2.44 GHz to 2.48 GHz generates different heating profiles. The simulated heating profiles were compared with experimental heating profiles obtained by using an IR camera. None of simulations with individual frequency exactly matches with experimental temperature profile. The closet match between simulated and observed temperature profiles was found with 2.46 …

Heating Performance Assessment Of Domestic Microwave Ovens, Krishnamoorthy Pitchai, Sohan Birla, Jeyamkondan Subbiah, David D. Jones

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

Due to inherent nature of standing wave patterns of microwaves inside a cavity and dielectric properties of different components in a food, microwave heating leaves non-uniform distribution of energy inside the food volumetrically. Achieving heating uniformity plays critical role in improving the safety of microwave heated products. In this paper, we present a method for assessing heating uniformity within domestic microwave ovens. A custom designed container
was used to assess heating uniformity of a range of microwave ovens using IR camera. The study suggested that the best place to place food in a microwave oven is not at center but …

Generating ‘As-Applied’ Pesticide Distribution Maps From A Self-Propelled Agricultural Sprayer Based On Nozzle Pressure Data, Joe D. Luck, Ajay Sharda, Santosh Pitla, John P. Fulton, Scott A. Shearer

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

The application of pre-emergence, post-emergence, and burn-down herbicides (i.e., glyphosate) continues to increase as producers attempt to reduce both negative environmental impacts from tillage and input costs from labor, machinery and materials. The use of precision agriculture technologies such as automatic boom section control allows producers to reduce offtarget application when applying herbicides. While automatic boom section control provides benefits, pressure differences across the spray boom resulting from boom section actuation can lead to offrate application errors. Off-rate errors may also result from spray rate controller compensation for ground speed changes and velocity variation across the spray boom during turning …

Testing Fuel Efficiency Of A Tractor With A Continuously Variable Transmission, Bart A. Coffman, Michael F. Kocher, Viacheslav I. Adamchuk, Roger M. Hoy, Erin E. Blankenship

Department of Agricultural and Biological Systems Engineering: Faculty Publications

A John Deere 8530 IVT tractor (Waterloo, Iowa) with a continuously variable transmission (CVT) that could be operated in automatic (CVT) or manual (fixed gear ratio) mode was tested for fuel consumption at a setpoint travel speed of 9 km·h^‐1 with 17 different drawbar loads. Linear regression analysis results showed that with the throttle set to maximum in both transmission modes, operating the tractor with the transmission in the automatic mode was more fuel efficient than operating with the transmission in the manual mode when the drawbar power was approximately 78%, or less, of maximum power. When load transition …

Testing Of Rtk-Level Satellite-Based Tractor Auto-Guidance Using A Visual Sensor System, Dwight Easterly, Viacheslav I. Adamchuk, Roger M. Hoy, Michael F. Kocher

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The use of satellite-based positioning has advanced considerably in the world of agriculture, providing a range of technical solutions that include the automated steering of tractors and self-propelled machinery. With the development of auto-guidance systems comes the need to evaluate their performance. Given that current precision and accuracy claims are relatively small in magnitude, it is imperative there be a testing system capable of detecting errors with ten times greater accuracy-- possibly as little as a few millimeters. A visual sensor was adopted to achieve this level of measurement resolution. The sensor was used to determine the cross-track error estimates …

Using A Vision Sensor System For Performance Testing Of Satellite-Based Tractor Auto-Guidance, Dwight Easterly, Viacheslav I. Adamchuk, Michael F. Kocher, Roger M. Hoy

Department of Agricultural and Biological Systems Engineering: Faculty Publications

A vision sensing system for the measurement of auto-guidance pass-to-pass and long-term errors was implemented to test the steering performance of tractors equipped with auto-guidance systems. The developed test system consisted of an optical machine vision sensor rigidly mounted on the rear of the tested tractor. The center of the drawbar hitch pin point was used as the reference from which to measure the deviation of the tractor’s actual travel path from its desired path. The system was built and calibrated to a measurement accuracy of better than 2 mm. To evaluate the sensor, two auto-guidance systems equipped with RTK-level …

Modeling Changes In Biomass Composition During Microwave-Based Alkali Pretreatment Of Switchgrass, Deepak R. Keshwani, Jay J. Cheng

Department of Agricultural and Biological Systems Engineering: Faculty Publications

This study used two different approaches to model changes in biomass composition during microwave-based pretreatment of switchgrass: kinetic modeling using a time-dependent rate coefficient, and a Mamdani-type fuzzy inference system. In both modeling approaches, the dielectric loss tangent of the alkali reagent and pretreatment time were used as predictors for changes in amounts of lignin, cellulose, and xylan during the pretreatment. Training and testing data sets for development and validation of the models were obtained from pretreatment experiments conducted using 1–3% w/v NaOH (sodium hydroxide) and pretreatment times ranging from 5 to 20 minutes. The kinetic modeling approach for lignin …

Ultrasound-Assisted Osmotic Dehydration Of Strawberries: Effect Of Pretreatment Time And Ultrasonic Frequency, Juan Garcia-Noguera, Francisca I. P. Oliveira, Maria Izabel Gallão, Curtis L. Weller, Sueli Rodrigues, Fabiano A. N. Fernandes

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Pretreatment of fruits prior to drying has shown success in reducing drying time and costs. In this work, ultrasound-assisted osmotic dehydration has been implemented as a method to increase water diffusivity and reduce drying time in strawberries. Strawberry halves were immersed in distilled water and in two different concentrations of sucrose solutions while pretreatment time and ultrasonic frequency levels were varied to determine their effect on drying time, water loss, and soluble solids gain. A microscopic analysis was carried out to evaluate the formation of microchannels and other changes to the fruit tissue structure. Greater sucrose concentration used in ultrasound- …

Numerically Predicting Seepage Gradient Forces And Erosion: Sensitivity To Soil Hydraulic Properties, Garey A. Fox, Derek M. Heeren, Glenn V. Wilson, E. J. Langendoen, Amanda K. Fox, Maria L. Chu-Agor

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Research has suggested that streambank seepage can be an important mechanism of bank instability; however, limited information is available on the level of soil characterization necessary to accurately predict seepage gradient forces and erosion. The objective of this research was to quantify the expected range of predicted seepage gradients for various degrees of site characterization. Uncertainty analysis on seepage gradient predictions was performed relative to variability in soil hydraulic properties. A two-dimensional unsaturated/saturated groundwater flow model was used to simulate a homogeneous soil layer for sand and loamy sand soils packed at various bulk densities, ρ_b. A pedotransfer …

Extrusion Systems: Components, Qi Fang, Milford Hanna

Department of Agricultural and Biological Systems Engineering: Faculty Publications

An extrusion system can be very simple to very complex. The complexity, or versatility, of a particular system is determined by the range of feedstocks to be processed, the desired transformations of the feedstocks, and the desired form of the products resulting from the process. These determine the specific design requirements of the various components of an extrusion system.

Opto-Electrophoretic Detection Of Bio-Molecules Using Conducting Chalcogenide Glass Sensors, Zhiyong Yang, Megan K. Fah, Kelly A. Reynolds, Jonathan D. Sexton, Mark R. Riley, Marie-Laure Anne, Bruno Bureau, Pierre Lucas

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Novel telluride glasses with high electrical conductivity, wide infrared transparency and good resistance to crystallization are used to design an opto-electrophoretic sensor for detection and identification of hazardous microorganisms. The sensor is based on an attenuated total reflectance element made of Ge-As-Te glass that serves as both an optical sensing zone and an electrode for driving the migration of bio-molecules within the evanescent wave of the sensor. An electric field is applied between the optical element and a counter electrode in order to induce the migration of bio-molecules carrying surface charges. The effect of concentration and applied voltage is tested …

On The Dynamics Of Canopy Resistance: Generalized Linear Estimation And Relationships With Primary Micrometeorological Variables, Suat Irmak, Denis Mutiibwa

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The 1‐D and single layer combination‐based energy balance Penman‐Monteith (PM) model has limitations in practical application due to the lack of canopy resistance (r_c) data for different vegetation surfaces. r_c could be estimated by inversion of the PM model if the actual evapotranspiration (E_Ta) rate is known, but this approach has its own set of issues. Instead, an empirical method of estimating r_c is suggested in this study. We investigated the relationships between primary micrometeorological parameters and rc and developed seven models to estimate r_c for a nonstressed maize canopy on an hourly …

161. The Potential Role Of Extensor Muscle Fatigue In The Onset Of Intervertebral Disc Degeneration: A Novel In Vivo Model, Mary Beth M. Grabowsky, Nicholas A. Pallota, Matthew W. Connelly, Brett Van Etten, Rebecca A. Wachs, Max Alley, Joseph C. Glennon, Andrew H. Dubin, John W. German, Richard L. Uhl, Eric H. Ledet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

BACKGROUND CONTEXT: Occupation is strongly correlated to low back pain (LBP). Specific occupational activities associated with low back pain include poor posture, whole body vibration, and repetitive lifting. These activities have a common link: they result in fatigue of the primary spinal extensor musculature. This fatigue may lead to increased intervertebral loading - a stimulus for disc degeneration. If true, this association could provide a vital connection between detrimental physical activities and LBP. However, the link between muscle fatigue and increased load across the disc space has never been quantified in vivo.

PURPOSE: The purpose of this study was to …

Retrofit Of Distillation Columns In Biodiesel Production Plants, Nghi Nguyen, Yaşar Demirel

Yaşar Demirel Publications

Column grand composite curves and the exergy loss profiles produced by the Column-Targeting Tool of the Aspen Plus simulator are used to assess the performance of the existing distillation columns, and reduce the costs of operation by appropriate retrofits in a biodiesel production plant. Effectiveness of the retrofits is assessed by means of thermodynamics and economic improvements. We have considered a biodiesel plant utilizing three distillation columns to purify biodiesel (fatty acid methyl ester) and byproduct glycerol as well as reduce the waste. The assessments of the base case simulation have indicated the need for modifications for the distillation columns. …

Nonequilibrium Thermodynamics Modeling Of Coupled Biochemical Cycles In Living Cells, Yaşar Demirel

Yaşar Demirel Publications

Living cells represent open, nonequilibrium, self organizing, and dissipative systems maintained with the continuous supply of outside and inside material, energy, and information flows. The energy in the form of adenosine triphosphate is utilized in biochemical cycles, transport processes, protein synthesis, reproduction, and performing other biological work. The processes in molecular and cellular biological systems are stochastic in nature with varying spatial and time scales, and bounded with conservation laws, kinetic laws, and thermodynamic constraints, which should be taken into account by any approach for modeling biological systems. In component biology, this review focuses on the modeling of enzyme kinetics …

Nebraska Agricultural Water Management Demonstration Network (Nawmdn): Integrating Research And Extension/Outreach, Suat Irmak, Jennifer M. Rees, Gary L. Zoubek, Brandy S. Van Dewalle, William R. Rathje, Rodney Debuhr, Dan Leininger, Darrel D. Siekman, James W. Schneider, Andrew P. Christiansen

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Maximizing the net benefits of irrigated plant production through appropriately designed agricultural water management programs is of growing importance in Nebraska, and other western and Midwestern states, because many areas are involved in management and policy changes to conserve irrigation water. In Nebraska, farmers are being challenged to practice conservation methods and use water resources more efficiently while meeting plant water requirements and maintaining high yields. Another challenge Nebraska experiences in it's approximately 3.5‐million‐ha irrigated lands is limited adoption of newer technologies/tools to help farmers better manage irrigation, conserve water and energy, and increase plant water use efficiency. In 2005, …

Estimating Dilemma Zone Hazard Function At High Speed Isolated Intersection, Anuj Sharma, Darcy Bullock, Srinivas Peeta

Anuj Sharma Publications

The traditional surrogate measures of safety (like number of vehicles in dilemma zone) fail to quantify the risk of crash. Traffic conflict has been proposed as an improved surrogate measure of safety for operations at isolated intersections to quantify the risk. This paper develops a dilemma zone hazard function estimating procedure to obtain the probability of traffic conflict occurring. This approach is an extension of the current approach of dilemma zone boundaries to determine the risk of traffic conflict for an individual vehicle in the case of a dilemma zone incursion. Field data collected from the intersection of SR37 and …