Engineering Commons^™

Application Of Limited Mixing In The Hele–Shaw Geometry In Fabrication Of Janus Hydrogels, Md Mahmudur Rahman

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

It is widely accepted that cells behave differently responding to the stiffness of their extracellular matrix (ECM). Such observations were made by culturing cells on hydrogel substrates of tunable stiffness. However, it was recently proposed that cells may sense how strongly they are tethered to ECM, not the local stiffness of ECM. To investigate both hypotheses, we developed a method to fabricate Janus polyacrylamide (PAAM) gels. We squeeze two drops of different concentrations in the Hele-Shaw geometry to generate radial Stokes flow. When the drops coalesce, limited mixing occurs at the interface due to the narrow confinement, and diffusion normal …

Characterization Of Extraction Methods To Recover Phenolic-Rich Antioxidants From Blue Green Algae (Spirulina) Using Response Surface Approaches, Ahmad Salamatullah

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Blue green algae (spirulina) is a dietary system that is widely consumed as a whole food or as a supplement in many Asian countries where populations are mostly unaffected by many of the diseases currently afflicting western societies, such as cancer, heart disease and arthiritis. Indeed, spirulina is a rich source of antioxidants with the phenolic compounds playing a significant role. As components of a complex dietary system, phenolic compounds can act alone or through synergistic mechanisms to impart a greater biologic effect than can be elicited by a sum of the individual parts. Therefore, an understanding of the antioxidative …

Connect With Bioengineering Researchers And Entrepreneurs, Clemson University

Bioengineering

2014 Program for Connect with Bioengineering Researchers and Entrepreneurs at Madren Conference Center.

Subtalar Fusion Fixture Design And Test, Nathan Ortiz

Honors Theses

Subtalar arthrodesis is performed when cartilage in the talo-calcaneal (the ankle) joint is degraded in a patient and there are multiple approaches to this surgery. Using synthetic bone material, fixtures were cast from aluminum, using the process of evaporation pattern casting, and epoxy. This casting was used to grip the calcaneus bone of the foot in order to load it mechanically, simulating different scenarios that would be encountered during walking. The relative displacement of the ankle joint was measured using a digital image correlation (DIC) program that was modified to work in both two- and three-dimensional space. This program can …

Mammary Epithelial Cells Cultured Onto Non-Woven Nanofiber Electrospun Silk-Based Biomaterials To Engineer Breast Tissue Models, Yas Maghdouri-White

Theses and Dissertations

Breast cancer is one of the most common types of cancer affecting women in the world today. To better understand breast cancer initiation and progression modeling biological tissue under physiological conditions is essential. Indeed, breast cancer involves complex interactions between mammary epithelial cells and the stroma, both extracellular matrix (ECM) and cells including adipocytes (fat tissue) and fibroblasts (connective tissue). Therefore, the engineering of in vitro three-dimensional (3D) systems of breast tissues allows a deeper understanding of the complex cell-cell and cell-ECM interactions involved during breast tissue development and cancer initiation and progression. Furthermore, such 3D systems may provide a …

Summer 2014 Biomedical Engineering Newsletter, Department Of Biomedical Engineering, Michigan Technological University

Department of Biomedical Engineering Newsletters

Table of Contents

• New IEEE, AIMBE and SPIE fellows
• Arteries on aisle 9
• Implants with sensors that shake off infection
• Mitch Kirby wins Whitaker International Fellowship
• Skin patch warns when it’s time to get out of the sun

Hand Prosthesis, Tru Nguyen, Aaron Delano, Kyle M. Green, Jorge Maderal, Cody Poland

Thinking Matters Symposium Archive

This project deals with engineering students’ prosthetic hand design, submitted to the University of Southern Maine’s engineering department. The primary goal of the prosthetic hand design is to allow an impaired individual to grasp and hold everyday objects ranging from a toothbrush to a jug of milk. The project consists of three teams each designing their respective portion of the prosthetic device. The teams will deal with three specific design areas; computer aided design of the mechanism, electronic integration, and manufacturing implementation. The design team turns notebook doodles into virtual models in SolidWorks. The electronics team will control a battery …

Department Of Biological Systems Engineering Newsletter, April 2014

BSE Department Magazine

No abstract provided.

Section Abstracts: Biomedical And General Engineering

Virginia Journal of Science

Abstracts of the Biomedical and General Engineering Section for the 92nd Annual Meeting of the Virginia Academy of Science, May 13-15, 2014, Virginia Commonwealth University, Richmond, Virginia

Robust, Degradable Peg-Based Collagen Hydrogels For Elastomeric Tissue Augmentation, Charles Wilbur Peak

Open Access Theses

Vocal folds are made of an elastomeric tissue and are essential to everyday life, allowing for communication. Approximately 28 million individuals have paralysis or scarring of the vocal folds mostly due to injury or systemic diseases. Symptoms may include voice hoarseness or fatigue. Healthy vocal folds consist of distinct layers of soft tissue. We are designing hydrogels with properties similar to these healthy tissues. The hydrogels are envisioned to be used as injectable and degradable tissue matrices that allow for repair and regeneration of the vocal folds. ^ We present the synthesis of a robust and degradable hydrogel system made …

Developing An Embedded System Solution For High-Speed, High-Capacity Data Logging For A Size-Constrained, Low-Power Biomechanical Telemetry System And Investigating Components For Optimal Performance, Brandon Blaine Gardner

Open Access Theses

The Purdue Neurotrauma Group (PNG) seeks to develop a biomechanical telemetry system capable of monitoring and storing athletes' head motions with the intention of identifying when a player may be at risk of neurophysiological damage, especially brain damage. A number of commercially-available systems exist with a similar goal; however, each of these systems discards information below an acceleration threshold. Research by PNG indicates that any acceleration may contribute to brain damage and that, because of this, an event-based model is insufficient for a proper understanding of an athlete's neurophysiological health. Continuous-time monitoring of head accelerations is therefore necessary. To facilitate …

Characterizing Habituation Using The Time-On-Task Metric In An Iris Recognition System, Jacob A. Hasselgren

Open Access Theses

This thesis presents a characterization of biometric habituation in an iris recognition study using qualitative analysis of a distributed habituation survey and quantitative analysis of iris images collected in 2010 and 2012. The performed analyses answered the following two questions: a) How consistently does the biometric community define habituation?; and b) Does the time-on-task variable provide enough evidence to indicate the existence of habituation in an iris recognition system? The qualitative analysis examined responses to 12 habituation-related questions from 13 biometric experts to identify common themes that not only determined definition consistency but also characterized critical components often omitted from …

Controlling Protein Release Using Biodegradable Microparticles, Benjamin Patrick Kline

Open Access Theses

Research in the field of protein therapeutics has exploded over the past decade and continues to grow in both academia and in industry. Protein drugs have advantages of being highly specific and highly active making them coveted targets for high profile disease states like cancer and multiple sclerosis. Unfortunately, their many advantages are complemented by their obstacles. Because proteins are highly active and highly specific, the window between efficacy and toxicity is very narrow and drug development can be long and arduous. In addition, protein activity is dependent on its specific folding conformation that is easily disrupted by a variety …

Computer Modeling And Simulation Of Implantable Medical Device Heating Due To Mri Gradient Coil Fields, Bryan David Stem

Open Access Theses

For patients with implantable medical devices, the ability to safely undergo MRI scanning is critical to ensuring the highest standard of care. The gradient coils of an MRI generate kilohertz frequency, time varying magnetic fields. These magnetic fields induce a voltage on the external case of metallic, implantable medical devices through electromagnetic induction. Since the magnetic field generated by a gradient coil is time varying, the induced voltage results in the flow of eddy currents which can cause heating effects. These heating effects have been successfully modeled using ANSYS Maxwell and ANSYS Mechanical software packages.

The multi-physics simulation and solution …

Feasibility Of Pulsed Proton Induced Acoustics For 3d Dosimetry, Fahed M. Alsanea

Open Access Theses

Proton therapy has the potential to deposit its energy in tissue with high conformity to the tumor and significantly reduced integral dose to normal tissue compared to conventional radiation, such as x-rays. As a result, local control can be enhanced while reducing side-effects and secondary cancers. This is due to the way charged Particles deposit their energy or dose, where protons form a Bragg peak and establish a well-defined distal edge as a function of depth (range). To date, the dose delivered to a patient from proton therapy remains uncertain, in particular the positioning of the distal edge of the …

Developing A Hardware Platform For A Low-Power, Low-Cost, Size-Constrained Biomechanical Telemetry System, Aditya Balasubramanian

Open Access Theses

As sport-related traumatic brain injuries face increasing attention from the media and the general public, the need to be able to detect brain injury quickly, inexpensively and accurately is more important than ever. Commercially-available event-based systems exist that claim to achieve this goal; however, they collect little to no continuous-time data and primarily indicate when a pre-determined acceleration threshold has been exceeded under the unvalidated assumption that a potentially concussive blow has occurred. Recent findings by the Purdue Neurotrauma Group (PNG) have indicated that repeated exposure to both concussive and subconcussive blows can result in cumulative trauma disorder. To track …

Characteristics Of Fibrous Tissue At High Rates Of Tensile Loading, Benjamin J. Claus

Open Access Theses

The mechanical behavior of fibrous tissue is generally characterized at very low strain rates. However, many injuries occur at high rates of loading, such as those encountered in sporting events or vehicle accidents. An understanding of injury behavior requires the injury process to be recorded at high strain rates. Even at low rates of loading, the injury/failure within tissues occurs quickly. Furthermore, using conventional imaging systems, the surface of a specimen may be well documented throughout an experiment. However, damage formation does not necessarily begin at the surface of the specimen or even on the surface exposed to a camera. …

Biomechanics And Relaxivity For Functional Imaging Of Articular Cartilage Injury And Degradation, Kateri Elizabeth Fites

Open Access Theses

Osteoarthritis (OA) is a major debilitating health concern and economic burden worldwide, affecting 27 million people in the United States alone. OA often follows tissue injury, and is marked by changes in the structure and biomechanical function of cartilage, including breakdown of extracellular matrix molecules, loss of bulk tissue stiffness, and increase in articular surface friction and wear. Unlike bone and many other tissues, cartilage lacks an intrinsic capacity for regeneration. Advanced OA is typically diagnosed by patient symptoms (e.g. joint pain) and confirmed by radiographic evaluation of joint space narrowing. However, the application of functional imaging to assess cartilage …

A Robotic Test Of Proprioception Within The Hemiparetic Arm Post-Stroke, Lucia Simo, Lior Botzer, Claude Ghez, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Background: Proprioception plays important roles in planning and control of limb posture and movement. The impact of proprioceptive deficits on motor function post-stroke has been difficult to elucidate due to limitations in current tests of arm proprioception. Common clinical tests only provide ordinal assessment of proprioceptive integrity (eg. intact, impaired or absent). We introduce a standardized, quantitative method for evaluating proprioception within the arm on a continuous, ratio scale. We demonstrate the approach, which is based on signal detection theory of sensory psychophysics, in two tasks used to characterize motor function after stroke.

Methods: Hemiparetic stroke survivors and neurologically intact …

A Strategy For Integrating Essential Three-Dimensional Microphysiological Systems Of Human Organs For Realistic Anticancer Drug Screening, Christopher Heylman, Agua Sobrino, Venktesh S. Shirure, Christopher Cw Hughes, Steven C. George

Biomedical Engineering

Cancer is one of the leading causes of morbidity and mortality around the world. Despite some success, traditional anticancer drugs developed to reduce tumor growth face important limitations primarily due to undesirable bone marrow and cardiovascular toxicity. Many drugs fail in clinical development after showing promise in preclinical trials, suggesting that the available in vitro and animal models are poor predictors of drug efficacy and toxicity in humans. Thus, novel models that more accurately mimic the biology of human organs are necessary for high-throughput drug screening. Three-dimensional (3D) microphysiological systems can utilize induced pluripotent stem cell technology, tissue engineering, and …

Field Penetration In Mri-Based Breast Models: A Numerical Investigation, Giuseppe Ruvio, Raffaele Solimene, Antonio Cuccaro, Max Ammann

Articles

The use of reliable computational tools is fundamental to investigate different aspects of microwave breast cancer imaging. From the development of high-definition and realistic numerical breast models, different coupling mechanisms and the reaction of different tissues to microwave signals can be characterized. In this paper, field penetration inside four numerical breast phantoms with varying adipose content is evaluated in the frequency range 0.5 - 10 GHz across sagittal cuts.

Long-Term Results Of Comprehensive Clubfoot Release Versus The Ponseti Method: Which Is Better?, Peter A. Smith, Ken N. Kuo, Adam Graf, Joseph Krzak, Ann Flanagan, Sahar Hassani, Angela Caudill, Frederick Dietz, Jose Morcuende, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

Background

Clubfoot can be treated nonoperatively, most commonly using a Ponseti approach, or surgically, most often with a comprehensive clubfoot release. Little is known about how these approaches compare with one another at longer term, or how patients treated with these approaches differ in terms of foot function, foot biomechanics, or quality-of-life from individuals who did not have clubfoot as a child.

Questions/purposes

We compared (1) focused physical and radiographic examinations, (2) gait analysis, and (3) quality-of-life measures at long-term followup between groups of adult patients with clubfoot treated either with the Ponseti method of nonsurgical management or a comprehensive …

Modeling And Experimental Methods To Predict Oxygen Distribution In Bone Defects Following Cell Transplantation, Christopher M. Heylman, Sharon Santoso, Melissa D. Krebs, Gerald M. Saidel, Eben Alsberg, George F. Muschler

Biomedical Engineering

We have developed a mathematical model that allows simulation of oxygen distribution in a bone defect as a tool to explore the likely effects of local changes in cell concentration, defect size or geometry, local oxygen delivery with oxygen-generating biomaterials (OGBs), and changes in the rate of oxygen consumption by cells within a defect. Experimental data for the oxygen release rate from an OGB and the oxygen consumption rate of a transplanted cell population are incorporated into the model. With these data, model simulations allow prediction of spatiotemporal oxygen concentration within a given defect and the sensitivity of oxygen tension …

Computational Evaluation Of Shear Stress And Restenosis In Stented Coronary Arteries Using Optical Coherence Tomography, Joshua K. Hughey

Master's Theses (2009 -)

The cause of coronary artery neointimal thickness (NT) leading to restenosis in ~10% of drug-eluting stents (DES) is unknown, but adverse wall shear stress (WSS) may contribute. Prior studies comparing WSS to restenosis for first generation DES yielded conflicting results, and cited different mechanisms of action for DES agents. Studies to date have not accounted for stent geometry, which dictates local WSS patterns influencing drug concentration. The objective of this investigation was to evaluate current generation stent platforms via their WSS patterns and their respective impact on NT. We prospectively enrolled 19 patients, who were randomized to thin-strut (81μm) 2-link …

Markerless Analysis Of Upper Extremity Kinematics During Standardized Pediatric Assessment, Jacob R. Rammer

Master's Theses (2009 -)

Children with hemiplegic cerebral palsy experience reduced motor performance in the affected upper extremity and are typically evaluated based on degree of functional impairment using activity-based assessments such as the Shriners Hospitals for Children Upper Extremity Evaluation (SHUEE), a validated clinical measure, to describe performance prior to and following rehabilitative or surgical interventions. Evaluations rely on subjective therapist scoring techniques and lack sensitivity to detect change. Objective clinical motion analysis systems are an available but time-consuming and cost-intensive alternative, requiring uncomfortable application of markers to the patient. There is currently no available markerless, low-cost system that quantitatively assesses upper extremity …

Material Differences In Equine Cortical And Trabecular Bone, Ryan B. Allen

Master's Theses

A greater understanding of bone materials would be beneficial in creating more accurate computer models and in the making of biomedical products involving bone. This study set out to determine whether cortical and trabecular bone are two separate materials, or whether they are the same material with a variance in porosity. To answer this question, samples were taken from different sections of the equine metacarpus, underwent densitometry analysis and were statistically analyzed. The majority of results suggest that the material is the same between varying densities of bone and thus the same between cortical and trabecular bone. These particular results …

Generation Of Bipolar Nanosecond Pulses, Sambasiva Rao Rajulapati

Electrical & Computer Engineering Theses & Dissertations

Bipolar pulse generation has been studied using transmission line technology, which was mainly used for monopolar pulse generation. In this thesis, low impedance, high current, nanosecond pulse generators were designed, constructed and tested. Five transmission lines were connected in parallel, so the impedance was 10 n. The transmission lines were switched by a spark gap switch operated in air. The closing of the switch creates a matched condition on one side of the transmission lines and a short circuit on the other side of the transmission lines. When the transmission lines are precharged, one of the two waves in opposite …

A Comparative Study Of Gmo Labeling And Liability Systems In The Us, Eu, And South Korea: The Circumstances And A Future Potential For Harmonization, Moonsook Park

Maurer Theses and Dissertations

With the remarkable development of GMOs, GMO trade has also increased. The different attitudes on GMOs among the countries all over the world, specifically the US, EU, and South Korea, have the potential to create international trade conflicts. In order to mediate the conflicts, reasonable labeling and liability systems need to be established to prevent potential GMO risks. The Biosafety Protocol regarding the transboundary movement of GMOs exists to resolve such tensions, but it fails to sufficiently solve the problems and provide clear regulations concerning GMO labeling and liability systems.

A successful GMO labeling and liability system should emphasize the …

Differential Effects Of Refractive Blur On Day And Nighttime Driving Performance, Joanne M. Wood, Michael J. Collins, Alex Chaparro, Ralph Marszalek, Trent Carberry, Philippe Lacherez, Byoung Sun Chu

Publications

PURPOSE. To investigate the effect of different levels of refractive blur on real-world driving performance measured under day and nighttime conditions.

METHODS. Participants included 12 visually normal, young adults (mean age = 25.+- 5.2 years) who drove an instrumented research vehicle around a 4 km closed road circuit with three different levels of binocular spherical refractive blur (+0.50 diopter sphere [DS], +1.00 DS, +2.00 DS) compared with a baseline condition. The subjects wore optimal spherocylinder correction and the additional blur lenses were mounted in modified fullfield goggles; the order of testing of the blur conditions was randomized. Driving …

Quantification Of Local Hemodynamic Alterations Caused By Virtual Implantation Of Three Commercially Available Stents For The Treatment Of Aortic Coarctation, Sung Kwon, Jeffrey A. Feinstein, Ronak Jashwant Dholakia, John F. Ladisa

Biomedical Engineering Faculty Research and Publications

Patients with coarctation of the aorta (CoA) are prone to morbidity including atherosclerotic plaque that has been shown to correlate with altered wall shear stress (WSS) in the descending thoracic aorta (dAo). We created the first patient-specific computational fluid dynamics (CFD) model of a CoA patient treated by Palmaz stenting to date, and compared resulting WSS distributions to those from virtual implantation of Genesis XD and modified NuMED CP stents, also commonly used for CoA. CFD models were created from magnetic resonance imaging, fluoroscopy and blood pressure data. Simulations incorporated vessel deformation, downstream vascular resistance and compliance to match measured …