Engineering Commons^™

Label-Free Optical Biomarkers Detect Early Calcific Aortic Valve Disease In A Wild-Type Mouse Model, Ishita Tandon, Shelby Johns, Alan Woessner, Jessica Perez, Delaney Cross, Asya Ozkizilcik, Timothy Muldoon, Srikanth Vallurupalli, Muralidhar Padala, Kyle P. Quinn, Kartik Balachandran

Biomedical Engineering Faculty Publications and Presentations

Background

Calcific aortic valve disease (CAVD) pathophysiology is a complex, multistage process, usually diagnosed at advanced stages after significant anatomical and hemodynamic changes in the valve. Early detection of disease progression is thus pivotal in the development of prevention and mitigation strategies. In this study, we developed a diet-based, non-genetically modified mouse model for early CAVD progression, and explored the utility of two-photon excited fluorescence (TPEF) microscopy for early detection of CAVD progression. TPEF imaging provides label-free, non-invasive, quantitative metrics with the potential to correlate with multiple stages of CAVD pathophysiology including calcium deposition, collagen remodeling and osteogenic differentiation.

Methods …

The Effects Of Solution Condition On Virus Filtration Performance, Fnu Namila

Graduate Theses and Dissertations

Virus filtration is an integral part of the downstream purification of mammalian cell culture-derived biotherapeutics to assure the viral safety of the products. Virus filtration membranes remove viruses based on a size-exclusion mechanism. Commercial parvovirus filers possess unique membrane structure and are designed to remove smaller non-enveloped parvoviruses with size 18-26 nm. However, some filters face issues, such as pre-mature fouling, the decline of filtrate flux, and reduction in virus retention. This doctoral dissertation focused on identifying the factors that influence the filtrate flux and the virus retention capability of commercial virus filters. The effects of solution pH and ionic …

Projecting Water Available For Irrigation Use And Identifying Water Supply Stress Under Climate Change Scenarios In Selected U.S. Fruit And Vegetable Production Regions, Andrew Shaw

Graduate Theses and Dissertations

Climate change affects water resources differently across geospatial regions in the United States (U.S). There is a concern of how water availability will be affected by changes in long-term temperature and precipitation patterns, specifically in major production regions for eight fruit and vegetable crops. The effects on surface water available for irrigation use and supply stress in five regions containing 31 Agricultural Statistics Districts (ASDs) were assessed. The Water Supply Stress Index Model was used and modified to project water available for irrigation use across nine climate scenarios driven by historical data, five General Circulation Models, two population scenarios, and …

Development Of Functional Materials And Devices On Flexible Platforms Using Additive Print Manufacturing Processes For Biomedical And Environmental Applications, Dinesh Maddipatla

Dissertations

In recent years, considerable research has been vested into the development of printed electronics (PE) to explore the best ways of fabricating electronic devices on flexible platforms using additive print manufacturing processes. PE produces flexible devices that are compatible with complex geometries, foldable applications and conformal to curved surfaces, with a promising potential for large‐area device fabrication at relatively lower manufacturing costs. This dissertation focuses majorly on the design and fabrication of novel flexible functional materials and devices for biomedical and environmental applications using additive printing processes.

Initially, a simple paper-based low cost and rapid prototypable platform with oxygen sensors …

Biomechanical Comparison Of The Validity Of Two Configurations Of Simulators For Body-Powered Hand Prostheses, Camille Bennett, Amanuel Matias, Brendan Smith, Jenevieve Roper, Stephen Estelle

Honors Thesis

Simulators are often used in prosthesis research to evaluate new devices or characterize aspects of prosthesis use, so as to recruit participants without amputations. Simulators, in general, must locate the prosthesis somewhere other than where the intact biological limb exists. In this study, we compared two configurations of simulators for hand prostheses to determine which leads to more natural elbow and shoulder kinematics, and in turn, which is the more valid simulator. One configuration located the prosthesis in-line with the forearm, beyond the biological hand; the other located it beside the hand. We measured the kinematics of 12 non-amputee participants …

The Economics Of Classroom 3-D Printing Of Open-Source Digital Designs Of Learning Aids, Nicole Gallup, Joshua M. Pearce

Michigan Tech Publications, Part 1

While schools struggle financially, capital for purchasing physical learning aids is often cut. To determine if costs could be reduced for learning aids, this study analyzed classroom-based distributed digital manufacturing using 3-D printing of open-source learning aid designs. Learning aid designs are analyzed in detail for their economic viability considering printing and assembly costs with purchased components and compared to equivalent or inferior commercial products available on Amazon. The results show current open-source 3-D printers are capable of manufacturing useful learning aids and that doing so provides high economic savings in the classroom. Overall, the average learning aid would save …

Compact Low-Cost Fiberless Diffuse Speckle Contrast Flow-Oximeter, Guoqiang Yu, Chong Huang, J. Todd Hastings

Biomedical Engineering Faculty Patents

A low-cost compact fiberless diffuse speckle contrast flow-meter includes a small laser diode and a 2-dimensional imaging device such as a charge coupled device (CCD) or complementary metal oxide semiconductor (CMOS) for directly contacting the tissue and measuring a parameter such as blood flow in a deep/thick volume of tissue (up to 10 mm depth). The small laser diode is fixed at a certain distance (0 to 20 mm) from the imaging device and directly contacts the tissue. Light emitted from the laser diode penetrates through the tissue and reflects back to the imaging device without passing through any lenses …

Multimodal Computational Modeling Of Visual Object Recognition Deficits But Intact Repetition Priming In Schizophrenia, Pejman Sehatpour, Anahita Bassir Nia, Devin Adair, Zhishun Wang, Heloise M. Debaun, Gail Silipo, Antigona Martinez, Daniel C. Javitt

Publications and Research

The term perceptual closure refers to the neural processes responsible for “filling-in” missing information in the visual image under highly adverse viewing conditions such as fog or camouflage. Here we used a closure task that required the participants to identify barely recognizable fragmented line-drawings of common objects. Patients with schizophrenia have been shown to perform poorly on this task. Following priming, controls and importantly patients can complete the line-drawings at greater levels of fragmentation behaviorally, suggesting an improvement in their ability to performthe task. Closure phenomena have been shown to involve a distributed network of cortical regions, notably the lateral …

Phenotyping Of Hypertensive Heart Disease And Hypertrophic Cardiomyopathy Using Personalized 3d Modeling And Cardiac Magnetic Resonance Imaging, Chuah Shoon Hui

Student Works (2020-2029)

Differential diagnosis of hypertensive heart disease (HHD) and hypertrophic cardiomyopathy (HCM) is clinically challenging but important for treatment management. This study aims to phenotype HHD and HCM in 3D+time domain by using a multiparametric motion-corrected personalized modeling algorithm and cardiac magnetic resonance (CMR). 44 CMR data, including 12 healthy, 16 HHD and 16 HCM cases, were examined. Multiple CMR phenotype data consisting of geometric and dynamic variables were extracted globally and regionally from the models over a full cardiac cycle for comparison against the healthy models and clinical reports. Statistical classifications were used to identify the distinctive characteristics and disease …

Annual Simulation Of Photovoltaic Retrofits Within Existing Parabolic Trough Concentrating Solar Powerplants, Nipun Goel, Hannah O'Hern, Matthew Orosz, Todd Otanicar

Mechanical and Biomedical Engineering Faculty Publications and Presentations

Solar power for electricity production comes from either photovoltaics or concentrating solar power plants. The former has seen rapid growth and expansion due to the rapid fall in global prices, while the latter has seen moderate growth due to ability to cheaply store thermal energy for later use. Hybridization, or combining photovoltaics with concentrating solar power represents a potential way for lowering cost while enabling long term storage. Over 5 GW of capacity exist worldwide using parabolic trough style technology for concentrating solar power which presents a unique option for optimization in the form of a photovoltaic retrofit. While it …

Identification Of Ecg Anomalies Through Deep Deterministic Learning, Uzair Iqbal

Student Works (2020-2029)

Electrocardiography (ECG) is a primary diagnostic tool for measuring the malfunctioning of the heart muscles in the context of morbidity of different cardiac diseases and arrhythmia. Different existing techniques and methods delivered accurate cardiac diseases myocardial infarction (heart stroke) and atrial fibrillation recognition. However, there are still some flaws in existing methods like recognition of special myocardial infarction situation flattened T wave in “Non-Specific ST-T Changes (nsst-t)” and reduction of computational cost in cardiac diseases recognition. Accurate recognition of cardiac diseases along with least computational complexity and feature analysis of flattened T wave in myocardial infarction remains an open job. …

Incorporation Of Lignin In Natural And Synthetic Biomaterials To Alter Mechanical And Biochemical Properties For Enhanced Wound Healing, Jorge Alfonso Belgodere

LSU Doctoral Dissertations

It is estimated that chronic, non-healing wounds affect more than 6.5 million Americans annually, with an estimated healthcare cost beyond $14 billion. Here, we attempted to create composites of natural (collagen type I or gelatin-methacrylate) or synthetic (poly(ethylene glycol) polymers incorporating a natural plant component, lignin, to combat the costs and limitations current wound healing methods face. Three-dimensional matrices of collagen type I (Col I) are widely used in tissue engineering applications for its abundance in many tissues, bioactivity with many cell types, and excellent biocompatibility. Inspired by the structural role of lignin in plant tissue, we found that sodium …

Update On The Use Of Transcranial Electrical Brain Stimulation To Manage Acute And Chronic Covid-19 Symptoms, Giuseppina Pilloni, Marom Bikson, Bashar W. Badran, Mark S. George, Steven A. Kautz, Alexandre Hideki Okano, Abrahão Fontes Baptista, Leigh E. Charvet

Publications and Research

The coronavirus disease 19 (COVID-19) pandemic has resulted in the urgent need to develop and deploy treatment approaches that can minimize mortality and morbidity. As infection, resulting illness, and the often prolonged recovery period continue to be characterized, therapeutic roles for transcranial electrical stimulation (tES) have emerged as promising non-pharmacological interventions. tES techniques have established therapeutic potential for managing a range of conditions relevant to COVID-19 illness and recovery, and may further be relevant for the general management of increased mental health problems during this time. Furthermore, these tES techniques can be inexpensive, portable, and allow for trained self-administration. Here, …

Real-Time Optical Monitoring Of Endotracheal Tube Displacement, Ramzan Ullah, Karl Doerfer, Pawjai Khampang, Faraneh Fathi, Wenzhou Hong, Joseph E. Kerschner, Bing Yu

Biomedical Engineering Faculty Research and Publications

Proper ventilation of a patient with an endotracheal tube (ETT) requires proper placement of the ETT. We present a sensitive, noninvasive, operator-free, and cost-effective optical sensor, called Opt-ETT, for the real-time assessment of ETT placement and alerting of the clinical care team should the ETT become displaced. The Opt-ETT uses a side-firing optical fiber, a near-infrared light-emitting diode, two photodetectors with an integrated amplifier, an Arduino board, and a computer loaded with a custom LabVIEW program to monitor the position of the endotracheal tube inside the windpipe. The Opt-ETT generates a visual and audible warning if the tube moves over …

Fuzzy Logic Based Control For Membrane Oxygenator In Blood Purification Process, Hany Hazfiza Manap

Student Works (2020-2029)

Membrane oxygenator in Extracorporeal Life Support (ECLS) is commonly used as a main component in Cardiopulmonary Bypass (CPB), Extracorporeal Membrane Oxygenator (ECMO) and Extracorporeal Carbon Dioxide Removal (ECCO2R). In this study, the focus is on Carbon Dioxide (CO2) gas exchange process in membrane oxygenator, which the CO2 is automatically controlled by adjusting sweep gas flow rate that entering the membrane oxygenator in achieving the desired pCO2 required by the particular patients. This automatic control action is controlled by the implementation of three controllers, Proportional-IntegralDerivative (PID) that is tuned by Ziegler-Nichols continuous cycling method, Fuzzy Logic Controller (FLC) and Fuzzy-PID controllers. …

Opto-Fluidic Manipulation Of Microparticles And Related Applications, Hao Wang

USF Tampa Graduate Theses and Dissertations

Contemporary biomedical technologies introduce many new instruments that are important for diagnosis and treatment of the patients. Instrument that can do rapid detection of bacterial infections, and further direct medical practitioner to prescribe optimal antibiotics is highly desirable. But unfortunately, this instrument is not available yet. Ideally, this instrument has to be portable to be used at point-of-care. This means it has to be small and inexpensive, but still highly accurate. Another critical requirement for the instrument is that the test results have to be available promptly. Because in case of such complications of bacterial infections as sepsis, each additional …

Urine Volume Reduction During Long-Duration Cave Exploration By A Light-Weight And Portable Forward Osmosis System, Sebastian Engelhardt, Katey E. Bender, Jörg Vogel, Stephen E. Duirk, Francisco B. Moore, Hazel A. Barton

International Journal of Speleology

The preservation of caves is a challenge during long-duration cave expeditions where human waste can add significant nitrogen to the cave ecosystem. Since the removal of urine that accumulates during a multi-day caving trip is not always feasible due to weight and volume constraints, a light-weight and portable filtration system that is capable of reducing urine volume would be desirable. In this study we tested the Aquaporin Inside hollow fiber membrane in a forward osmosis (FO) setup to evaluate its capability to reduce urine volume while rejecting nitrogenous compounds using different draw solution chemistries and water recovery rates. As a …

Fabrication And Characterisation Of Highly Aligned Fibrous Assemblies, Tan Chin Joo

Student Works (2020-2029)

Vascular grafting has been an effective remedy to vascular diseases for decades. Autografting by using the veins or arteries in the patient’s body is found to have patency rate for years. However, autografting may not be possible when compatible vessels are not available. In this case, synthetic vascular grafts are found to be effective replacements. Nevertheless, synthetic grafts with diameter less than 4 mm becomes challenging due to thrombogenicity and mismatch of mechanical properties with the native vessels. Along this line, the ability to develop new biostable synthetic materials suitable for smaller grafts and the ability to evaluate their resulting …

Effectiveness Of Building Systems Strategies For Mitigation Of Airborne Transmission Of Sars-Cov-2, Meng Kong, Jialei Shen, Bing Dong, Jianshun Jensen Zhang

Mechanical and Aerospace Engineering - All Scholarship

Airborne transmission has been recognized as a major transmission pathway for the infectious disease COVID-19. This study investigated the effectiveness of several indoor air quality (IAQ) control strategies on the mitigation of airborne transmission of SARS-CoV-2, the virus that causes COVID-19. The well-known airborne disease infection risk model (Wells-Riley equation) was used to estimate the infection risk of the SARS-CoV-2 in seven (7) different types of spaces including conference center/ballrooms, hotel bistro//cafeteria, hotel lobby, classrooms (lecture), conference room/small classroom, hotel or cruise ship guest rooms and open plan offices. The IAQ control strategies included increased ventilation rate, improved air distribution …

Calcium Sulfate-Containing Glass Polyalkenoate Cement For Revision Total Knee Arthroplasty Fixation, Leyla Hasandoost, Adel Alhalawani, Omar Rodriguez, Alireza Rahimnejad Yazdi, Paul Zalzal, Emil H. Schemitsch, Stephen D. Waldman, Marcello Papini, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Poly (methyl methacrylate) (PMMA) bone cement is used as a minor void filler in revision total knee arthroplasty (rTKA). The application of PMMA is indicated only for peripheral bone defects with less than 5 mm depth and that cover less than 50% of the bone surface. Treating bone defects with PMMA results in complications as a result of volumetric shrinkage, bone necrosis, and aseptic loosening. These concerns have driven the development of alternative bone cements. We report here on novel modified glass polyalkenoate cements (mGPCs) containing 1, 5 and 15 wt% calcium sulfate (CaSO₄) and how the modified …

Modulation Of Ros In Nanosecond-Pulsed Plasma-Activated Media For Dosage-Dependent Cancer Cell Inactivation In Vitro, Chunqi Jiang, Esin Bengisu Sozer, Shutong Song, Nicola Lai, P. Thomas Vernier, Sigi Guo

Bioelectrics Publications

Dosage control of reactive oxygen and nitrogen species (RONS) is critical to low-temperature plasma applications in cancer therapy. Production of RONS by atmospheric pressure, nonequilibrium plasmas in contact with liquid may be modulated via plasma conditions including plasma treatment time and pulse voltage and repetition frequency. In this study, a terephthalic acid-based probe was used to measure hydroxyl radicals [OH_aq] in water exposed to plasma and to demonstrate that the OH_ag concentration increases linearly with treatment time. Fluorometric measurements of hydrogen peroxide concentration in plasma-activated water show a linear relationship between the H₂O₂ production …

Topology And Control Of Self-Assembled Domain Patterns In Low-Dimensional Ferroelectrics, Y. Nahas, S. Prohorenko, Q. Zhang, V. Govinden, N. Valanoor, L. Bellaiche

Physics Faculty Publications and Presentations

Whilst often discussed as non-trivial phases of low-dimensional ferroelectrics, modulated polar phases such as the dipolar maze and the nano-bubble state have been appraised as essentially distinct. Here we emphasize their topological nature and show that these self-patterned polar states, but also additional mesophases such as the disconnected labyrinthine phase and the mixed bimeron-skyrmion phase, can be fathomed in their plurality through the unifying canvas of phase separation kinetics. Under compressive strain, varying the control parameter, i.e., the external electric field, conditions the nonequilibrium self-assembly of domains, and bridges nucleation and spinodal decomposition via the sequential onset of topological transitions. …

Biomechanical And Biophysical Properties Of Breast Cancer Cells Under Varying Glycemic Regimens, Diganta Dutta, Xavier-Lewis Palmer, Jose Ortega-Rodas, Vasundhara Balraj, Indrani Ghosh Dastider, Surabhi Chandra

Electrical & Computer Engineering Faculty Publications

Diabetes accelerates cancer cell proliferation and metastasis, particularly for cancers of the pancreas, liver, breast, colon, and skin. While pathways linking the 2 disease conditions have been explored extensively, there is a lack of information on whether there could be cytoarchitectural changes induced by glucose which predispose cancer cells to aggressive phenotypes. It was thus hypothesized that exposure to diabetes/high glucose alters the biomechanical and biophysical properties of cancer cells more than the normal cells, which aids in advancing the cancer. For this study, atomic force microscopy indentation was used through microscale probing of multiple human breast cancer cells (MCF-7, …

Wetting-Driven Formation Of Present-Day Loess Structure, Yanrong Li, Weiwei Zhang, Shengdi He, Adnan Aydin

Faculty and Student Publications

© 2020 The Authors Present-day loess, especially Malan loess formed in Later Quaternary, has a characteristic structure composed of vertically aligned strong units and weak segments. Hypotheses describing how this structure forms inside original loess deposits commonly relate it to wetting-drying process. We tested this causal relationship by conducting unique experiments on synthetic samples of initial loess deposits fabricated by free-fall of loess particles. These samples were subjected to a wetting-drying cycle, and their structural evolutions were documented by close-up photography and CT scanning. Analysis of these records revealed three key stages of structural evolution: initiation (evenly distributed cracks appear …

An Exercise Device Used To Achieve Bone Formation Metrics For The Strengthening Of The Proximal Femur., Sean P. Coyle

Electronic Theses and Dissertations

Lateral falls often lead to hip fracture particularly in the elderly who have low bone mineral density. These fractures frequently lead to indirect mortality soon after injury. Normal use over the course over a lifetime leads to optimized adaptation of the bone in the proximal femur according to normal loading. A lateral fall generates non-normal, lateral loading at the proximal hip where the bone has not adapted to withstand such loading. The resulting fracture is generated by reversed strains on the bone tissue in the femoral neck in the hip in contrast to vertical, quotidian loading. Modern practices for preventing …

Effects Of Marathon Training On Male And Female Femoral Stress Fracture Risk, Clara Lin

Master's Theses

Marathon runners are prone to femoral stress fractures due to the high magnitudes and frequencies of lower extremity loads during training. Female runners tend to have a greater incidence of stress fracture compared to male runners. Sex-specific differences in body structure, joint pressure, and muscle activation patterns that influence bone remodeling may cause this observed difference in stress fracture occurrence. The goal of this thesis was to develop a finite element model of the femur during marathon training, then determine if marathon training affected bone properties of male and female runners differently. To achieve this goal, a finite element femur …

Characterizing The Biophysical Properties And Origin Of Extracellular Matrix In The Breast Tumor Microenvironment, Connor T. King

LSU Master's Theses

Tumors derived from breast tissue possess the ability to manipulate and permanently alter their surrounding tissue. Studies demonstrate that tissues surrounding breast tumors have differences in secreted factors as well as extracellular matrix (ECM) deposition and structure. However, some fundamental gaps exist within this paradigm: specifically, what exacerbates this transformation and are these changes maintained between the subtypes of breast tumors? Therefore, a targeted evaluation of the effects of the tumor on the stromal microenvironment in a subtype specific manner will be invaluable. To determine if tumor aggressiveness and subtype differentially regulate the tumor microenvironment, a model must be constructed …

Analysis Of Glutathione Supplementation Effects On Female Metabolic Syndrome Condition Using Classification Techniques, Nur Rasyidah Hasan Basri

Student Works (2020-2029)

Lesser known to the public that main antioxidants in our body, Glutathione are also said to influence the metabolic syndrome (MS) condition. Oral supplementation consisting of glutathione precursors and vitamin C introduced in the study was to improve glutathione (GSH) status of the consumer and the main objective of this study is to investigate GSH effects on selected MS condition. Several known studies had proven that oral supplementation improved GSH level of consumer. However, there is no definite proof on how it’s affecting MS parameters. Also, there is less study carried out on the relationship between glutathione levels and metabolic …

Convergence Of Auditory Nerve Fibers Onto Globular Bushy Cells, Matthew Kersting

USF Tampa Graduate Theses and Dissertations

Globular bushy cells (GBCs) of the cochlear nucleus are specialized neurons that encode the temporal features of sound. Multiple auditory nerve inputs are known to synapse onto a single GBC, but the exact number and sizes of these inputs have not been systematically investigated in adult mice. To gain a high-resolution and unbiased look at the auditory inputs contacting GBCs, our lab utilized Serial Block-Face Scanning Electron Microscopy. Specifically, 21 GBCs and all their large inputs were reconstructed at nanometer resolution. To produce the most precise results, we applied careful attention to the reconstruction and implemented cutting-edge meshing algorithms. We …

In The Pursuit Of Assistance: A Team's Desire To Not Let A Congenital Amputation Get In A Young Boy's Way, Carl Russell Iii, Gavin Loucks, Kirsten Wozniak

Purdue Journal of Service-Learning and International Engagement

EPICS is a service-learning design program run through Purdue University. It strives to teach students design skills through providing for individuals, communities, and organizations in the surrounding area while mirroring engineering industry standards. BME (Biomedical Engineering) is a team within EPICS that strives to serve community partners through biomedical applications. William Sevick is an elementary school student with a congenital arm amputation. William and his family have been working with the BME team for the past three years designing assistive devices with the purpose of improving his actions in daily life such as eating, playing games, and riding his bike.