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2025

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Hypericum Chishuiense (Hypericaceae, Sect. Ascyreia), A New St. John's Wort Species From Guizhou, China, Ruizhi Bai, Zheng-Lin He, Ferhat Celep, Lu Wang, Chunlei Xiang Mar 2025

Hypericum Chishuiense (Hypericaceae, Sect. Ascyreia), A New St. John's Wort Species From Guizhou, China, Ruizhi Bai, Zheng-Lin He, Ferhat Celep, Lu Wang, Chunlei Xiang

Turkish Journal of Botany

Hypericum chishuiense (Hypericaceae), a new species from Chishui County, Guizhou Province, China, is described and illustrated. Molecular phylogenetic analyses, based on five plastid DNA markers (psbA-trnH, psbC-trnS, rbcL, trnL-trnF, and trnS-trnG), place the new species within H. sect. Ascyreia. Morphologically, the new species is closely related to H. stellatum and H. rotundifolium, but it can be distinguished by several features, including broadly ovate, ovate-elliptic to subcircular leaves (vs. oblong-lanceolate or lanceolate to narrowly ovate leaves of H. stellatum) and broadly elliptic, ovate to triangular-ovate sepals (vs. narrowly lanceolate and rare markedly leaf-like sepals H. stellatum), and it can be distinguished …


High Rate Of Complications With Exchange Nailing For Femoral Nonunions, Benjamin Averkamp, Ziqing Yu, Julia C. Mastracci, Matthew J. Braswell, Andrew T. Chen, Luke A. Lopas, Ishani Sharma, Hassan Farooq, Hassan Mir, Jessica Rivera, Rachel B. Seymour, Joseph R. Hsu, Evidence-Based Musculoskeletal Injury & Trauma Collaborative, Robert D. Zura, Marc Schatz, Et Al Mar 2025

High Rate Of Complications With Exchange Nailing For Femoral Nonunions, Benjamin Averkamp, Ziqing Yu, Julia C. Mastracci, Matthew J. Braswell, Andrew T. Chen, Luke A. Lopas, Ishani Sharma, Hassan Farooq, Hassan Mir, Jessica Rivera, Rachel B. Seymour, Joseph R. Hsu, Evidence-Based Musculoskeletal Injury & Trauma Collaborative, Robert D. Zura, Marc Schatz, Et Al

School of Medicine Faculty Publications

Objectives: To evaluate rates of nonunion repair, osseous healing, and outcomes in femoral nonunions with contemporary healing. Design: Retrospective review. Setting: Five academic level 1 trauma centers. Patients/Participants: This study includes adult patients (age older than 18) seen at one of the participating institutions between 2012 and 2019 who sustained a femur fracture (OTA/AO 31, 32, 33) initially treated with intramedullary fixation that developed nonunion and were treated with exchange nailing for the index nonunion surgery. Seventy-nine patients with femoral nonunion met inclusion criteria. Intervention: Exchange nailing for treatment of femoral nonunion. Main Outcome Measurements: The primary outcome measure was …


Enhancing Mucus Flow And Clearance By Grafting Zwitterionic Hydrogel Films To Luminal Surfaces, Ryan Horne, Caleb Escudero, Morgan Ellerman, C. Allan Guymon, Marlan Hansen Mar 2025

Enhancing Mucus Flow And Clearance By Grafting Zwitterionic Hydrogel Films To Luminal Surfaces, Ryan Horne, Caleb Escudero, Morgan Ellerman, C. Allan Guymon, Marlan Hansen

Faculty Publications

Objective

To determine the effects of zwitterionic hydrogel films on mucus contact angles, flow, and stasis with respect to medical polymer surfaces, both flat and tubular.

Methods

A zwitterionic hydrogel thin film was photografted onto medical rubber surfaces and compared against non-zwitterionic hydrogel thin films and untreated surfaces to determine its impact on mucus contact angles, mucus flow on sheets and tubes, and mucus plugging.

Results

Zwitterionic and conventional hydrogel films significantly reduce the mucus contact angles and the tilt required to initiate mucus flow on sheets and in tubular systems. Preliminary experiments show that these films may also shorten …


Kir7.1 Is The Physiological Target For Hormones And Steroids That Regulate Uteroplacental Function, Monika Haoui, Citlalli Vergara, Lina Kenzler, Jerome Schröer, Geraldine Zimmer-Bensch, David Fleck, Christopher Wiesbrock, Marc Spehr, Polina V Lishko Mar 2025

Kir7.1 Is The Physiological Target For Hormones And Steroids That Regulate Uteroplacental Function, Monika Haoui, Citlalli Vergara, Lina Kenzler, Jerome Schröer, Geraldine Zimmer-Bensch, David Fleck, Christopher Wiesbrock, Marc Spehr, Polina V Lishko

2020-Current year OA Pubs

Preterm birth is detrimental to the well-being of both the mother and the newborn. During normal gestation, the myometrium is maintained in a quiescent state by progesterone. As a steroid hormone, progesterone is thought to modify uterine and placental morphology by altering gene expression, but another direct mode of action has long been suspected. Here, we reveal the nongenomic molecular mechanism of progesterone as the activation of human and murine inwardly rectifying potassium channel Kir7.1, which is expressed in myometrium and placental pericytes during late gestation. Kir7.1 is also activated by selective steroids, including those used to prevent premature labor, …


Enhancing The Immunogenicity Of Extracellular Vesicle-Based Vaccines Against Pathogenic Nthi Bacteria, Christina Ciko Mar 2025

Enhancing The Immunogenicity Of Extracellular Vesicle-Based Vaccines Against Pathogenic Nthi Bacteria, Christina Ciko

Theses

Acute otitis media (AOM), or ear infections, are highly prevalent in children, with nearly 80% experiencing at least one AOM by the age of three. As such, there is an urgent need for a vaccine against Nontypeable Haemophilus influenzae (NTHi), a main cause of AOM in the US. Most vaccines contain multiple antigens from the pathogen, inducing an immune response and antibodies to those antigens. Here, we describe a novel approach to creating a vaccine against NTHi, incorporating a unique recombinant trivalent protein (Tri) featuring three NTHi antigens (OMP26, P6, and protein F) in a single peptide chain with an …


Investigating The Impact Of Electroconvulsive Therapy On Brain Networks And Sleep: An Observational Study Protocol, Mohammadmehdi Kafashan, Lucas Lebovitz, Robby Greenspan, Sijia Zhao, Tae Kim, Masud Husain, Tamara Hershey, Pilar Cristancho, R Edward Hogan, Ben Julian Agustin Palanca, Nuri B Farber, Dns-Ect Study Team Mar 2025

Investigating The Impact Of Electroconvulsive Therapy On Brain Networks And Sleep: An Observational Study Protocol, Mohammadmehdi Kafashan, Lucas Lebovitz, Robby Greenspan, Sijia Zhao, Tae Kim, Masud Husain, Tamara Hershey, Pilar Cristancho, R Edward Hogan, Ben Julian Agustin Palanca, Nuri B Farber, Dns-Ect Study Team

2020-Current year OA Pubs

INTRODUCTION: Electroconvulsive therapy (ECT) is a highly effective treatment for refractory depression, but it may also cause cognitive side effects. Despite decades of use, the mechanisms by which ECT exerts both its antidepressant and cognitive effects are still poorly understood, with the latter substantially limiting referral and adherence to therapy. ECT induces changes in correlated neural activity-functional connectivity-across various brain networks, which may underlie both its clinical efficacy and associated cognitive side effects. Electroencephalography (EEG) could address these knowledge gaps by identifying biomarkers that predict therapeutic outcomes or cognitive side effects. Such developments could ultimately improve patient selection and adherence. …


Noccaea Bulutii (Brassicaceae): A New Species From Northeast Anatolia, Bariş Özüdoğru, Hayri̇ Duman Mar 2025

Noccaea Bulutii (Brassicaceae): A New Species From Northeast Anatolia, Bariş Özüdoğru, Hayri̇ Duman

Turkish Journal of Botany

Noccaea bulutii is described as a new species from Artvin, in NE Anatolia. It resembles N. phyrgia, N. aptera, N. kovatsii and N. ochroleuca, but easily distinguished from all these species by its dentate basal leaves and elongated sterile shoots. Phylogenetic analyses using the nuclear-encoded ribosomal internal transcribed spacer (ITS) region placed N. bulutii and closely related species in a large polytomic clade, but none of these species formed a subclade with N. bulutii, demonstrating that these species are clearly distinct from each other. The species is described with diagnostic characters, detailed photographs, and taxonomic comments provided. The morphological similarities …


Future Applications Of Fluorescence Lifetime Imaging Ophthalmoscopy In Neuro-Ophthalmology, Neurology, And Neurodegenerative Conditions, Daniel M. Markowitz, Elizabeth Affel, György Hajnóczky, Robert C. Sergott Mar 2025

Future Applications Of Fluorescence Lifetime Imaging Ophthalmoscopy In Neuro-Ophthalmology, Neurology, And Neurodegenerative Conditions, Daniel M. Markowitz, Elizabeth Affel, György Hajnóczky, Robert C. Sergott

Farber Institute for Neuroscience Faculty Papers

Fluorescence lifetime imaging ophthalmoscopy (FLIO) has emerged as an innovative advancement in retinal imaging, with the potential to provide in vivo non-invasive insights into the mitochondrial metabolism of the retina. Traditional retinal imaging, such as optical coherence tomography (OCT) and fundus autofluorescence (FAF) intensity imaging, focus solely on structural changes to the retina. In contrast, FLIO provides data that may reflect retinal fluorophore activity, some of which may indicate mitochondrial metabolism. This review builds upon the existing literature to describe the principles of FLIO and established uses in retinal diseases while introducing the potential for FLIO in neurodegenerative conditions.


A Randomized Phase Ii/Iii Study Of Paclitaxel/Carboplatin/Metformin Versus Paclitaxel/Carboplatin/Placebo As Initial Therapy For Measurable Stage Iii Or Iva, Stage Ivb, Or Recurrent Endometrial Cancer: An Nrg Oncology/Gog Study, Victoria L. Bae-Jump, Michael W. Sill, Paola A. Gehrig, Jason D. Merker, David L. Corcoran, Adam D. Pfefferle, Michele C. Hayward, Joan L. Walker, Andrea R. Hagemann, Steven E. Waggoner, Roisin E. O'Cearbhaill, Megan E. Mcdonald, Mitchell I. Edelson, Paul A. Disilvestro, Amy L. Mcnally, Aimee Fleury, Ramey D. Littell, Frederick R. Ueland, Heather A. Lankes, Carol Aghajanian Mar 2025

A Randomized Phase Ii/Iii Study Of Paclitaxel/Carboplatin/Metformin Versus Paclitaxel/Carboplatin/Placebo As Initial Therapy For Measurable Stage Iii Or Iva, Stage Ivb, Or Recurrent Endometrial Cancer: An Nrg Oncology/Gog Study, Victoria L. Bae-Jump, Michael W. Sill, Paola A. Gehrig, Jason D. Merker, David L. Corcoran, Adam D. Pfefferle, Michele C. Hayward, Joan L. Walker, Andrea R. Hagemann, Steven E. Waggoner, Roisin E. O'Cearbhaill, Megan E. Mcdonald, Mitchell I. Edelson, Paul A. Disilvestro, Amy L. Mcnally, Aimee Fleury, Ramey D. Littell, Frederick R. Ueland, Heather A. Lankes, Carol Aghajanian

Abington Jefferson Health Papers

INTRODUCTION: We evaluated the efficacy of the addition of the anti-diabetic drug metformin to standard-of-care paclitaxel and carboplatin (PC) in patients with advanced and recurrent endometrial cancer (EC).

METHODS: In this phase II/III trial, EC patients with chemotherapy-naïve stage III/IVA (with measurable disease) and stage IVB or recurrent (with or without measurable disease) disease were randomly assigned to PC/metformin (850 mg BID) versus PC/placebo. Metformin or placebo was continued as maintenance therapy after completion of PC until disease progression. The primary endpoint of phase II was progression-free survival (PFS). The primary endpoint of phase III was overall survival (OS). Secondary …


Cover And Contents Mar 2025

Cover And Contents

Turkish Journal of Botany

No abstract provided.


Effects Of Humic Acid And Salt Stress On Growth, Physiological Parameters And Mineral Substance Uptake In Artemisia Dracunculus L. (Tarragon), Serhat Seven, Şener Akinci Mar 2025

Effects Of Humic Acid And Salt Stress On Growth, Physiological Parameters And Mineral Substance Uptake In Artemisia Dracunculus L. (Tarragon), Serhat Seven, Şener Akinci

Turkish Journal of Botany

In this study, the physiological changes in Artemisia dracunculus L. plants under salinity stress and the remediative roles of leonardite-derived liquid humic acid (HA) were investigated. Salt stress caused a significant decrease in measured growth parameters (plant height, fresh weight of leaves and stems, dry weight of leaves and stems, number of leaves and leaf area). HA had a positive effect on growth parameters at 75 mM NaCl concentration, except for leaf number, but its effect was limited at 150 mM NaCl concentration. The total amount of protein was found to be lower in the leaves of seedlings grown under …


Human Mesenchymal Stem Cell Therapy: Potential Advances For Reducing Cystic Fibrosis Infection And Organ Inflammation, Tracey L. Bonfield, Hillard M. Lazarus Mar 2025

Human Mesenchymal Stem Cell Therapy: Potential Advances For Reducing Cystic Fibrosis Infection And Organ Inflammation, Tracey L. Bonfield, Hillard M. Lazarus

Faculty Scholarship

Innovation in cystic fibrosis (CF) supportive care, including implementing new antimicrobial agents, improved physiotherapy, and highly effective modulators therapy, has advanced patient survival into the 4th and 5th decades of life. However, even with these remarkable improvements in therapy, CF patients continue to suffer from pulmonary infection and other visceral organ complications associated with long-term deficient cystic fibrosis transmembrane conductance regulator (CFTR) expression. Human mesenchymal stem cells (MSCs) have been utilized in tissue engineering based upon their capacity to provide structural components of mesenchymal tissues. An alternative role of MSCs, however is their versatile utilization as cell-based infusion powerhouses due …


The Interplay Between Endothelial Glycocalyx Maturity And Both The Toxicity And Intracellular Uptake Of Charged Nanoparticles, Claire A. Bridges, Lu D. Fu, Jonathan A. Yeow, Xiaojing D. Huang, Miriam D. Jackson, Rhiannon P. Kuchel, James D. Sterling, Shenda M. Baker, Megan S. Lord Mar 2025

The Interplay Between Endothelial Glycocalyx Maturity And Both The Toxicity And Intracellular Uptake Of Charged Nanoparticles, Claire A. Bridges, Lu D. Fu, Jonathan A. Yeow, Xiaojing D. Huang, Miriam D. Jackson, Rhiannon P. Kuchel, James D. Sterling, Shenda M. Baker, Megan S. Lord

Business and Information Technology Faculty Research & Creative Works

Nanoparticles are widely studied for delivering treatments to target tissues, but few have reached clinical use. Most nanoparticles encounter blood vessels on their way to target tissues. The inner surface of these vessels is lined with endothelial cells covered by a glycocalyx, an extracellular matrix rich in anionic glycans. The role of the glycocalyx in nanoparticle interactions is not well understood. Here, we demonstrate that endothelial cells need extended culture times to synthesize a mature glycocalyx. Our research shows that branched polyethyleneimine functionalized gold nanoparticles bind to endothelial cells expressing either a developing or mature glycocalyx, with the interaction involving …


Association Of Inflammatory Biomarkers With New Functional Morbidity At Hospital Discharge In Children Who Survive Severe Sepsis, Mallory Perry-Eaddy, Walter Faig, Martha Curley, Scott Weiss Mar 2025

Association Of Inflammatory Biomarkers With New Functional Morbidity At Hospital Discharge In Children Who Survive Severe Sepsis, Mallory Perry-Eaddy, Walter Faig, Martha Curley, Scott Weiss

Department of Pediatrics Faculty Papers

OBJECTIVE: New functional morbidity is common in critically ill children who survive sepsis; yet, the underlying biological mechanisms, particularly the impact of inflammation, remain unknown. We sought to test the hypothesis that increased levels of inflammatory biomarkers during the acute phase of pediatric sepsis are associated with new functional morbidity at hospital discharge.

METHODS: We conducted a post hoc secondary analysis of the MitoPSe clinical study, including N = 119 critically ill children who survived sepsis. Data collected included demographic and clinical variables and 31 inflammatory biomarkers collected at three distinct timepoints (within days 1-2 of PICU admission, days 3-5, …


A New Species From Türkiye:Ferula Erzincanica (Ferulinae, Apiaceae), Mehmet Sağiroğlu, Bariş Bani̇, Hayri̇ Duman Mar 2025

A New Species From Türkiye:Ferula Erzincanica (Ferulinae, Apiaceae), Mehmet Sağiroğlu, Bariş Bani̇, Hayri̇ Duman

Turkish Journal of Botany

In this study, Ferula erzincanica, a new species from East Anatolia, is described and illustrated. The new species shows significant differences from F. rigidula and F. divaricata, particularly by in the dissection of basal leaves, the length and orientation of the inflorescence branches, the length of the pedicels, the undulation of the dorsal wings of the mericarps, and the number of commissural vittae, as well as in the micromorphology of fruits as analyzed by SEM (Scanning Electron Microscopy). In addition, Maximum Likelihood (ML) and Bayesian Inference (BI) phylogenetic analyses based on the nrDNA ITS gene region were performed to determine …


Tropical Forests In The Americas Are Changing Too Slowly To Track Climate Change, Jesús Aguirre-Gutiérrez, Sophie Fauset, Sandra Díaz, Sami W. Rifai, Jose Javier Corral-Rivas, Maria Guadalupe Nava-Miranda, Roy González-M, Ana Belén Hurtado-M, Norma Salinas Revilla, Emilio Vilanova, Everton Almeida, Edmar Almeida De Oliveira, Esteban Alvarez-Davila, Luciana F. Alves, Ana Cristina Segalin De Andrade, Antonio Carlos Lola Da Costa, Simone Aparecida Vieira, Luiz Aragão, Eric Arets, Gerardo A. Aymard C, Fabrício Baccaro, Yvonne Vanessa Bakker, Timothy R. Baker, Olaf Bánki, Christopher Baraloto, Plínio Barbosa De Camargo, Erika Berenguer, Lilian Blanc, Damien Bonal, Frans Bongers Mar 2025

Tropical Forests In The Americas Are Changing Too Slowly To Track Climate Change, Jesús Aguirre-Gutiérrez, Sophie Fauset, Sandra Díaz, Sami W. Rifai, Jose Javier Corral-Rivas, Maria Guadalupe Nava-Miranda, Roy González-M, Ana Belén Hurtado-M, Norma Salinas Revilla, Emilio Vilanova, Everton Almeida, Edmar Almeida De Oliveira, Esteban Alvarez-Davila, Luciana F. Alves, Ana Cristina Segalin De Andrade, Antonio Carlos Lola Da Costa, Simone Aparecida Vieira, Luiz Aragão, Eric Arets, Gerardo A. Aymard C, Fabrício Baccaro, Yvonne Vanessa Bakker, Timothy R. Baker, Olaf Bánki, Christopher Baraloto, Plínio Barbosa De Camargo, Erika Berenguer, Lilian Blanc, Damien Bonal, Frans Bongers

School of Geography, Earth and Environmental Sciences

Understanding the capacity of forests to adapt to climate change is of pivotal importance for conservation science, yet this is still widely unknown. This knowledge gap is particularly acute in high-biodiversity tropical forests. Here, we examined how tropical forests of the Americas have shifted community trait composition in recent decades as a response to changes in climate. Based on historical trait-climate relationships, we found that, overall, the studied functional traits show shifts of less than 8% of what would be expected given the observed changes in climate. However, the recruit assemblage shows shifts of 21% relative to climate change expectation. …


Assessing The Impact Of Historic Mining On The Geochemistry Of Sediments In The Camel Estuary, Cornwall, U.K., Gregory Price, Matthew Cleave Mar 2025

Assessing The Impact Of Historic Mining On The Geochemistry Of Sediments In The Camel Estuary, Cornwall, U.K., Gregory Price, Matthew Cleave

School of Geography, Earth and Environmental Sciences

This investigation focusses on the geochemical properties of surficial sediments in the Camel Estuary, Cornwall, UK. Thegeochemistry of the samples were determined by XRF and data for Sn, As, Cu, Pb and Zn are presented. The data for Pb, Zn andAs shows a down estuary reduction, probably resulting from a combination of increasing distance from a presumed metalliferousmining source and mixing with marine sediments. The highest concentrations for As (48 ppm) and Zn (304 ppm) exceedsediment quality guidelines. Cu and Pb values are below the sediment quality guidelines. Although elevated Sn concentrations areseen in the middle part of the estuary, …


Pituitary Adenylate Cyclase Activating Polypeptide And Its Receptor As Novel Therapeutic Targets For Opioid Induced Hyperalgesia, Elizaveta Mangutov Mar 2025

Pituitary Adenylate Cyclase Activating Polypeptide And Its Receptor As Novel Therapeutic Targets For Opioid Induced Hyperalgesia, Elizaveta Mangutov

Arts & Sciences Graduate Student Theses and Dissertations

Opioids are commonly prescribed for the treatment of pain and headache disorders. However, chronic opioid use can result in a paradoxical increased sensitivity to pain as well as an extension of pain area known as opioid-induced hyperalgesia (OIH). One field OIH has been clearly identified is migraine, known as medication overuse headache (MOH). While opioids may provide acute relief, chronic use results in increased migraine pain severity and progression of migraine from an episodic to chronic state. The primary treatment is opioid cessation, which is difficult to implement as patients are reluctant to stop treatment they believe is helping them, …


Pituitary Adenylate Cyclase Activating Polypeptide And Its Receptor As Novel Therapeutic Targets For Opioid Induced Hyperalgesia, Elizaveta Mangutov Mar 2025

Pituitary Adenylate Cyclase Activating Polypeptide And Its Receptor As Novel Therapeutic Targets For Opioid Induced Hyperalgesia, Elizaveta Mangutov

Arts & Sciences Graduate Student Theses and Dissertations

Opioids are commonly prescribed for the treatment of pain and headache disorders. However, chronic opioid use can result in a paradoxical increased sensitivity to pain as well as an extension of pain area known as opioid-induced hyperalgesia (OIH). One field OIH has been clearly identified is migraine, known as medication overuse headache (MOH). While opioids may provide acute relief, chronic use results in increased migraine pain severity and progression of migraine from an episodic to chronic state. The primary treatment is opioid cessation, which is difficult to implement as patients are reluctant to stop treatment they believe is helping them, …


Clinical And Genetic Markers Of Vascular Toxicity In Glioblastoma Patients: Insights From Nrg Oncology Rtog-0825, Joshua D Strauss, Mark R Gilbert, Minesh Mehta, Ang Li, Renke Zhou, Melissa L Bondy, Erik P Sulman, Ying Yuan, Yanhong Liu, Elizabeth Vera, Merideth M Wendland, Volker W Stieber, Vinay K Puduvalli, Serah Choi, Nina L Martinez, H Ian Robins, Grant K Hunter, Chi-Fan Lin, Vivian A Guedes, Melissa A Richard, Stephanie L Pugh, Terri S Armstrong, Michael E Scheurer Mar 2025

Clinical And Genetic Markers Of Vascular Toxicity In Glioblastoma Patients: Insights From Nrg Oncology Rtog-0825, Joshua D Strauss, Mark R Gilbert, Minesh Mehta, Ang Li, Renke Zhou, Melissa L Bondy, Erik P Sulman, Ying Yuan, Yanhong Liu, Elizabeth Vera, Merideth M Wendland, Volker W Stieber, Vinay K Puduvalli, Serah Choi, Nina L Martinez, H Ian Robins, Grant K Hunter, Chi-Fan Lin, Vivian A Guedes, Melissa A Richard, Stephanie L Pugh, Terri S Armstrong, Michael E Scheurer

Faculty, Staff and Students Publications

Background: Glioblastoma (GBM) is an aggressive form of brain cancer in which treatment is associated with toxicities that can result in therapy discontinuation or death. This analysis investigated clinical and genetic markers of vascular toxicities in GBM patients during active treatment.

Methods: In total, 591 non-Hispanic White GBM patients with clinical data were included in the analysis from NRG RTOG-0825. Genome-wide association studies (GWAS) were performed from genotyped blood samples (N = 367) by occurrence of thrombosis or hypertension (grade ≥ 2). A clinical prediction model was produced for each vascular toxicity. Significant GWAS variants were then added to the …


Biochemical, Structural, And Conformational Characterization Of A Fungal Ethylene-Forming Enzyme, Shramana Chatterjee, Joel A. Rankin, Mark A. Farrugia, Simahudeen Bathir J S Rifayee, Christo Z. Christov, Jian Hu, Et. Al. Mar 2025

Biochemical, Structural, And Conformational Characterization Of A Fungal Ethylene-Forming Enzyme, Shramana Chatterjee, Joel A. Rankin, Mark A. Farrugia, Simahudeen Bathir J S Rifayee, Christo Z. Christov, Jian Hu, Et. Al.

Michigan Tech Publications

The ethylene-forming enzyme (EFE) from the fungus Penicillium digitatum strain Pd1 was heterologously produced in Escherichia coli and its properties were compared to the extensively characterized bacterial enzyme from Pseudomonas savastanoi strain PK2. Both enzymes catalyze four reactions: the conversion of 2-oxoglutarate (2OG) to ethylene and CO2, oxidative decarboxylation of 2OG coupled to L-arginine (L-Arg) hydroxylation, uncoupled oxidative decarboxylation of 2OG, and the production of 3-hydroxypropionate (3-HP) from 2OG. The strain Pd1 enzyme exhibited a greater ratio of ethylene production over L-Arg hydroxylation than the PK2 strain EFE. The uncoupled decarboxylation of 2OG and …


The Influence Of Body Mass Index On Biomarkers Of Cellular Senescence In Older Adults, Allyson K Palmer, Jennifer St Sauver, Roger A Fielding, Elizabeth Atkinson, Thomas A White, Michaela Mcgree, Susan Weston, Nathan K Lebrasseur Mar 2025

The Influence Of Body Mass Index On Biomarkers Of Cellular Senescence In Older Adults, Allyson K Palmer, Jennifer St Sauver, Roger A Fielding, Elizabeth Atkinson, Thomas A White, Michaela Mcgree, Susan Weston, Nathan K Lebrasseur

Faculty, Staff and Students Publications

Obesity accelerates the onset and progression of age-related conditions. In preclinical models, obesity drives cellular senescence, a cell fate that compromises tissue health and function, in part through a robust and diverse secretome. In humans, components of the secretome have been used as senescence biomarkers that are predictive of age-related disease, disability, and mortality. Here, using biospecimens and clinical data from two large and independent cohorts of older adults, we tested the hypothesis that the circulating concentrations of senescence biomarkers are influenced by body mass index. After adjusting for age, sex, and race, we observed significant increases in activin A, …


Consensus Recommendations For An Integrated Diagnostic Approach To Peripheral Nerve Sheath Tumors Arising In The Setting Of Neurofibromatosis Type 1, Calixto-Hope G Lucas, Andrea M Gross, Carlos G Romo, Carina A Dehner, Alexander J Lazar, Markku Miettinen, Melike Pekmezci, Martha Quezado, Fausto J Rodriguez, Anat Stemmer-Rachamimov, David Viskochil, Arie Perry Mar 2025

Consensus Recommendations For An Integrated Diagnostic Approach To Peripheral Nerve Sheath Tumors Arising In The Setting Of Neurofibromatosis Type 1, Calixto-Hope G Lucas, Andrea M Gross, Carlos G Romo, Carina A Dehner, Alexander J Lazar, Markku Miettinen, Melike Pekmezci, Martha Quezado, Fausto J Rodriguez, Anat Stemmer-Rachamimov, David Viskochil, Arie Perry

Faculty, Staff and Student Publications

Consensus recommendations published in 2017 histologically defining atypical neurofibromatous neoplasm of uncertain biologic potential (ANNUBP) and malignant peripheral nerve sheath tumor (MPNST) were codified in the 2021 WHO Classification of Tumors of the Central Nervous System and the 2022 WHO Classification of Tumors of Soft Tissue and Bone. However, given the shift in diagnostic pathology toward the use of integrated histopathologic and genomic approaches, the incorporation of additional molecular strata in the classification of Neurofibromatosis Type 1 (NF1)-associated peripheral nerve sheath tumors should be formalized to aid in accurate diagnosis and early identification of malignant transformation and enable appropriate intervention …


Assessment Of Physiological & Biochemical Changes In Tomato Plants Treated With Plant Growth Promoting Rhizobacteria (Pgpr) Under Salinity Stress Conditions, Mohammed Sharif Alhosani Mar 2025

Assessment Of Physiological & Biochemical Changes In Tomato Plants Treated With Plant Growth Promoting Rhizobacteria (Pgpr) Under Salinity Stress Conditions, Mohammed Sharif Alhosani

Thesis/ Dissertation Defenses

Plant growth-promoting rhizobacteria (PGPRs) can effectively mitigate the negative impacts of salt stress on plants. The present study reports the isolation of PGPRs from a high-saline mangrove ecosystem in Abu Dhabi, with isolates exhibiting ACC deaminase (ACCD) activity to reduce stress-induced ethylene, along with additional plant growth-promoting (PGP) characteristics, including phosphate solubilization (P+). A total of 57 salt-tolerant bacterial isolates from the mangrove rhizosphere were initially screened for ACCD and P+ activities. Of these, 24 isolates tested positive for PGP characteristics and were further evaluated for their ability to enhance salt stress tolerance in tomato seedlings. In addition, seedlings inoculated …


Computational Biology: Revealing The Secrets Of Dna, Yağmur BingüL Mar 2025

Computational Biology: Revealing The Secrets Of Dna, Yağmur BingüL

Osmosis Magazine

Science is exponentially growing. It gets millions of times better than its previous self each year. In 2000, when we published the first draft of the complete human genome to develop new ways to treat, cure, or even prevent the thousands of diseases that afflict humankind, it cost 3 billion dollars. Six years later, in 2006, it cost only $14 million to generate a “complete” human genome, to find out every single gene in the human DNA. And now, we can develop a complete human genome for only $1,500 - $4000.


The Hidden Faces Behind The Covid-19 Vaccine, Julia Brittain Mar 2025

The Hidden Faces Behind The Covid-19 Vaccine, Julia Brittain

Osmosis Magazine

When you think about the COVID-19 vaccine, the names Pfizer or Moderna probably come to mind. It’s no surprise that these companies are often mentioned in discussions of the COVID- 19 vaccine. After all, in December 2020, Pfizer-BioNTech became the first biopharmaceutical company to receive emergency use authorization for their COVID-19 vaccine from the FDA, and Moderna followed shortly after.


Osmosis Magazine - Spring 2021 Mar 2025

Osmosis Magazine - Spring 2021

Osmosis Magazine

Osmosis is a student read, led, and written publication from the University of Richmond, focusing on all aspects of healthcare and science.


The Reaction Of Eragrostis Curvula To N And K Fertilization, N.F G. Rethman, C C. De Witt Mar 2025

The Reaction Of Eragrostis Curvula To N And K Fertilization, N.F G. Rethman, C C. De Witt

IGC Proceedings (1977-2023)

Fertilization programmes for grass pastures in Southern Africa have placed emphasis on N and Pin the past. With the depletion of soil K, however, K fertilization is becoming increasingly important. Reliable response data for N and K fertilization is needed optimize fertilization level.


Efficacute De La Fertilization Minerale Des Prairies En Sol Alluvial, L Solimowski, R Lyszczarz, R Dembek Mar 2025

Efficacute De La Fertilization Minerale Des Prairies En Sol Alluvial, L Solimowski, R Lyszczarz, R Dembek

IGC Proceedings (1977-2023)

Le sol alluvial de la vallee basse de la Vistule offre des lieux naturels favorables a la culture des herbages (Cieslinski et Raszeja, 1983). On pratique assez souvent la seule fertilisation azotee, consideree comme la plus rentable. L'objectif de notre essai etait d'etudier !'influence des differents elements fertili­sants apportes pendant plusieurs annees sur la culture, !'evolu­tion de la composition botanique de la prairie, de la teneur en elements nutritifs de l'herbe et de la fertilite du sol.


Effects Of Fertilization And Liming On The Improvement Of Native Pastures, Maria E.V Lourenco, R.J. M. De Carvalho, Maria De L.A.P Da Silva Mar 2025

Effects Of Fertilization And Liming On The Improvement Of Native Pastures, Maria E.V Lourenco, R.J. M. De Carvalho, Maria De L.A.P Da Silva

IGC Proceedings (1977-2023)

Native pastures in Portugal have relatively low productivity. The yield and botanical composition of such grasslands, where some legumes species are present, can be improved by fertilization with phosphorus application and/or also liming (Carter, 1983). The presence of legumes in pasture can also be improved by molybdenum application (Lattan et al., 1984). Significant increases of phosphorus concentration in plants (Garden et al., 1978) and on soil available phosphorus (Gregan et al., 1980) due to phosphorus application have also been reported.

The objectives of this study were to evaluate the potential of such treatments on the improvement of native pastures.