Digital Commons Network^™

Optimized Microbial Recombinant Production Of Hiv-1 Anti-Envelope Antibody Fragments With Applications To Single Particle Tracking Of Virus Assembly, Merissa Michelle Bruns

Electronic Theses and Dissertations

In my findings, I have established a set series of protocols to recombinantly produce, purify and apply various fluorescent probes in vitro for the fluorescent labeling and study of the human immunodeficiency virus type 1 (HIV-1) envelope (Env) protein during HIV viral assembly. There remains insufficient knowledge about the molecular dynamics and interactions of HIV-1 Env protein with its counterpart, Gag, on the inner host cell surface during assembly of a mature virus particle. There also remains an insufficient amount of data for the understanding and clarification of the mechanism of action of a known host cell HIV-1 restriction factor, …

Criminalized Houseless Women, Jesus, And The Praxis Of Kinship: An Outsider’S Liberative Ethic, Sarah A. Neeley

Electronic Theses and Dissertations

Criminalization measures, such as Denver’s Urban Camping Ban, are an attempt to mask systemic causes of houselessness and assign blame to the personal failures of those living on the streets. Unaccompanied houseless women utilize street families to create community, survive houselessness, and fight criminalization measures. Since liberation and solidarity can become forces of oppression, this dissertation considers cultural evidence for the desire and means of liberation. Street families and the praxis of kinship form the basis of a liberative ethic that critiques systemic causes of houselessness and provides a model of relatedness that works toward social justice. The project is …

Children’S Health And Maternal Work Activities, Termeh Tavangar

Electronic Theses and Dissertations

I estimate the effect of poor child health on maternal labor force participation. Mothers of health-impaired children may decide not to work and stay at home to take care of their children. Alternatively, mothers may choose to enter the labor force to pay for these children’s additional resources. Which action dominates is the empirical question I answer in this paper. I control for the potential endogeneity of a child’s health status by using an instrumental variables approach. I find that if mothers have a child in poor health, the probability that the mother works is decreased by thirteen percentage points, …

Rab35 Centered Membrane Trafficking Pathway Directs Apical Constriction During Drosophila Gastrulation, Hui Miao

Electronic Theses and Dissertations

Force generation in epithelial tissues is often pulsatile, with actomyosin networks generating high-tension contractile forces at the cell cortex before cyclically disassembling. This pulsed nature of cytoskeletal forces implies that there must be cellular processes to extract unidirectional changes that drive processive transformations in cell shape. During Drosophila melanogastergastrulation, the invagination of the prospective mesoderm is driven by the pulsed constriction of apical surfaces. Here, we address the mechanisms by which the irreversibility of pulsed events is achieved while also permitting uniform epithelial behaviors to emerge. We use MSD-based analyses to identify contractile steps and find that when a …

Fxs-Causing Point Mutations In Fmrp Disrupt Neuronal Granule Formation And Function, Emily L. Starke

Electronic Theses and Dissertations

Fragile X Syndrome (FXS) is a neurodevelopmental disorder caused by the disruption of Fragile X Mental Retardation Protein (FMRP) function in neurons, affecting nearly 1 in 7,500 individuals. Although FXS typically occurs from a complete loss of FMRP expression due to a CGG trinucleotide expansion within the 5’UTR of the FMR1 gene, single nucleotide polymorphisms (SNPs) within the KH domains of FMRP have been shown to severely disrupt FMRP function. FMRP is an RNA-binding translation repressor that interacts with ~4% of the neuronal transcriptome. Many target mRNAs encode for proteins important for regulating synaptic processes and modulate synaptic plasticity. It …

The Role Of Vps54 In Drosophila Melanogaster Neuronal Development And Age Progressive Neurodegeneration, Emily Wilkinson

Electronic Theses and Dissertations

Vps54 is a subunit of the Golgi-associated retrograde protein (GARP) complex, which is involved in tethering endosome-derived vesicles to the trans-Golgi network (TGN). The “wobbler” mouse is the phenotypic result of a destabilizing point mutation in Vps54. This mutation causes neurodegeneration and is subsequently used as a model for human motor neuron disease. Presently, it is unclear how disruption of GARP complex function leads to motor neuron degeneration. To better understand the role of Vps54 in motor neuron development, function, and age-related neurodegeneration, we disrupted expression of the Vps54 ortholog in Drosophila and examined the impact on larval neuromuscular junction …

Compressible Hydrodynamics Of Few Body Optical Vortices, Jasmine M. Andersen

Electronic Theses and Dissertations

The ubiquity of vortices nearly rivals that of the innumerable fluids and spaces in which they live. Not only do they exist in systems such as superfluids, superconductors, optical fields, or cold atomic gases, for example, but they also exist in our atmospheres, oceans, and even in our veins. This makes understanding and accurately predicting the dynamics of vortices in various systems a relevant and meaningful endeavor.

From a typical hydrodynamic perspective, vortices move within a given fluid because of the background fluid density and phase gradients at the vortex location. However, we find that these gradients alone are insufficient …

A. B.A.L.A.N.C.E.: A Well-Being Research Study, Reggie Gwinn

Electronic Theses and Dissertations

The purpose of this study has been to investigate the impact of a well-being intervention, using a well-being curriculum, known as A. B.A.L.A.N.C.E.. The method of educational criticism and connoisseurship was used as the qualitative method. Educational criticism is rooted in the process of expressing the specific qualities of one’s observations, while educational connoisseurship is rooted in the process of appreciation. The intervention will be conducted by an interventionist, myself, who gave the 10-lesson intervention to six 6th grade (11 – 12 years old) participants over a two-week period. This was orchestrated over a technological platform known as Zoom. It …

Examining Experience, Role, And Lgbtq Identity In Department Chairs, Ashton B. Clouse

Electronic Theses and Dissertations

LGBTQ rights have progressed tremendously in recent times, not long ago LGBTQ individuals could be arrested simply for being themselves. Though many rights have been won, the fight for equity continues. This is especially true in the field of education, many think of higher education as a pathway to equity, but in reality it can serve to solidify societal inequities. Campus climate studies of LGBTQ faculty members in higher education show that climate is most impactful at the departmental level (Nichols & Scott, 2005), others highlight the importance of department chairs in fostering climate within their departments (Bystydzienski et al., …

The Ghost Town: An Autoethnographic Study On The Effects Of Loss And Trauma On A Saudi Arabian International Student’S Well-Being, Salman J. Alzowibi

Electronic Theses and Dissertations

We all have fought on grief’s battleground; some of us started at early ages, while others during their developmental age, teen’s years, or later in their adulthood. All of them are valuable resources and sites of knowledge that need to be explored. Yet, recent studies reduced grief into clinical psychological well-being. However, as I lived these experiences, trauma, loss, and grief impact all well-being dimensions. Grief intersects with large structures (e.g., social, economic, cultural, locations, etc.); all these components impact our way of grief how socially displayed (mourning). This dissertation encapsulates my personal experience elevating it to an academic work …

Evaluating Nuclear Energy As A Component Of U.S. Energy Innovation Systems, Bryce Jones

Electronic Theses and Dissertations

Nuclear energy is contentious in policy discussions that evaluate its role in the current U.S. clean energy innovation system. OECD nations, on average, have begun to reduce their dependence on nuclear energy. However, the United States has remained invested in its nuclear energy infrastructure and the role that it plays within federal research and development. This thesis examines the Neo-Schumpeterian perspective and the National Innovation System’s approach, the economic history of nuclear energy in the United States, and given insight from these factors, discusses the current role of nuclear energy in the U.S. energy innovation system. The objective is to …

Adding A Dimension: Illustrating Triple Consciousness Theory In The African American Literary Tradition, Asia Wesley

Electronic Theses and Dissertations

This thesis examines the way gender expands and nuances W.E.B. DuBois’s double consciousness theory, which depicts the African American identity as a doubleness that is both American and Negro. Black feminist criticism’s nuanced formulation of DuBois’s formulation of Black identity allows the African American literary tradition to be seen through three lenses: an American, a Negro, and an African American’s gender identity. In order to further contemporize the pre-existing Black feminist criticism, I examine Hurston, Brooks, and Morrison in the three time periods that followed DuBois’s coining of double consciousness theory: (1) the Harlem Renaissance, (2) the Civil Rights Movement …

Elucidating The Interfacial Interactions Between Biomacromolecules And Functionalized Pamam-Based Materials For Biomedical Applications, Briana L. Simms

Electronic Theses and Dissertations

Polyamidoamine (PAMAM) is a dendrimer structure with a polypeptide backbone architecture. It has been utilized in a wide variety of applications but has found significant utility in biomedical applications. PAMAM has been studied extensively due to its globular structure that is similar to proteins found in the body. The branched architecture and overall size provide a favorable environment for host-guest interactions and allows for the loading of small molecules for therapeutic delivery. Although PAMAM has many benefits for use in the area of therapeutic delivery, a primary area of concern for this molecular architecture is the terminal amines that serve …

Surface And Interfacial Phenomena Between Soil And Oil, Md Firoz Ahmed

Electronic Theses and Dissertations

Crude oil and motor oil spills on land have severe environmental consequences that pose threats to both humans and natural resources. It is particularly important to know the flow behavior of oils to protect terrestrial ecosystems from this kind of damage. The spreading kinetics, contact angle (CA), and droplet baseline studies of crude oil and motor oils were investigated over several realistic soil-based matrices composed of topsoil (silt-dominant), sand, clay, and moisture. It was found that with an increase in moisture content (MC), the spreading area decreased, and initial spreading time increased for all given oil. The initial CA generally …

A Spectroscopic And Quantum Chemical Investigation Into The Noncovalent Interactions And Charge Accommodation Of Biomolecules And Their Building Blocks In Various Environments, Ashley Elizabeth Williams

Electronic Theses and Dissertations

As optical measurements have grown increasingly more precise with the rage of the technological revolution, the computer’s ability has matched in computing speed to produce accurate quantum chemical predictions of systems ranging from the atomic to multi-molecular levels. Application of spectroscopy in the investigation of the structure and function of biomolecules and their building blocks has a rich literature background, with applications among cancer research, charge transfer and energy storage, and drug design and delivery. The focus of this dissertation is thus a quantum chemical and/or spectroscopic investigation of a series of biomolecules which include the vibrational band positions of …

On Domination And Bondage Numbers Of Some Classes Of Graphs, Andrew Pham

Electronic Theses and Dissertations

Given a simple finite graph G=(V,E), a vertex subset D ? V(G) is said to be a dominating set of G if every vertex v ? V(G)-D is adjacent to a vertex in D. The domination number of G, denoted ?(G), is the minimum cardinality among all dominating sets of G. In a network, the domination number determines the minimum number of sites required to dominate the entire network at a minimum cost. The bondage number of a graph G is the minimum cardinality among all edge sets B such that ?(G-B) > ?(G). The bondage number may serve as a …

Development Of Thiol Specific Fluorogenic Benzofurazan Derivatives For Live Cell Subcellular Organelle Thiol Imaging, Shenggang Wang

Electronic Theses and Dissertations

No abstract provided.

Management And Dietary Strategies To Mitigate Environmental Stressors In Northern Plains Cattle Feeding Systems, Warren Carl Rusche

Electronic Theses and Dissertations

Three studies were undertaken to examine strategies to mitigate environmental stress faced by Northern Plains cattle feeders. In the first study, 46 feedlot managers from SD (n = 21), MN (n = 6), and NE (n = 19) were surveyed on use and perceptions of heat stress (HS) mitigation strategies. All respondents avoided cattle handling during heat stress events and incorporated some method of HS mitigation. Buildings or shades were perceived as the most successful strategy (60.9%) and were most commonly named as strategies managers would like to employ (63% for shades and 17.4% for buildings). Increasing dietary corn silage …

Identification Of Loci Influencing Teosinte Crossing Barrier 1 (Tcb1) Efficacy In Maize By Quantitative Trait Loci (Qtl) Mapping And Genome-Wide Association Study (Gwas), Namrata Maharjan

Electronic Theses and Dissertations

Pollen cross-contamination has been a major problem for maize breeders. Various mechanical methods applied to avoid the contaminations are ineffective. The genetic factors related to maize fertilization can be used to develop an effective method to prevent pollen contamination. Pollen rejection ability controlled by Teosinte crossing barrier 1 (Tcb1) is such a genetic system. Silks possessing dominant Tcb1-s reject pollen possessing the recessive allele (tcb1). Successful fertilization occurs when Tcb1-s pollen falls upon tcb1 silks. The efficacy of dominant Tcb1-s was, however, reduced when repeatedly backcross with maize inbred lines, which suggests that there are modifiers to Tcb1-s. To find …

Pollinator Ecology In Agroecosystems Of Eastern South Dakota, Isabela Beatriz Vilella-Arnizaut

Electronic Theses and Dissertations

Community structure contributes to ecosystem persistence and stability. To understand the mechanisms underlying pollination and community stability of natural areas in a human influenced landscape, a better understanding of the interaction patterns between plants and pollinators in disturbed landscapes is needed. Furthermore, understanding the potential conservation value in green spaces such as botanical gardens could assist in preserving and bolstering plant-pollinator interactions. Our study takes place in the Northern Great Plains which still retains extensive tracts of remnant temperate grassland habitat within a matrix of varying land-uses. First, we used a network-based approach to quantify how temperate grassland attributes and …

Therapeutic Immunoglobulin G Surface Mobility Promotes Antibody-Dependent Cellular Phagocytosis By Arp2/3 And Syk Mediated Rearrangement Of Fcγ Receptors, Seongwan Jo

Electronic Theses and Dissertations

Therapeutic antibodies are rapidly growing class of drugs for treating cancers and immunological disorders by targeting specific antigens or blocking certain pathway to inhibit the tumor growth. In cancer immunotherapy, it was found that Fcγ receptor (FcγR) in immune cells play an important role in antibody dependent cell toxicity against tumor cells. Therefore, understanding FcγR activation mechanism, which requires ligation with immunoglobulin (IgG), is crucial to enhance potency of therapeutic antibodies. One crucial immune responses triggered upon FcγR ligation with IgG is phagocytosis which indicates clearing targets by engulfment. It is known that FcγRs form microclusters which gets rearranged during …

Assessing Dairy Farm Employees Health, Leyby Stephany Guifarro Rodriguez

Electronic Theses and Dissertations

This Master thesis evaluates the impact of general health care and eating habits (Study 1), vision care (Study 2), and mental health status (Study 3) on Latino dairy farmworkers lifestyle and work performance in South Dakota. We hypothesized that the health status of dairy workers has a negative impact on the workers’ job performance. In study 1, data from a total of 70 participants were collected, using a face-to-face survey in Spanish, which allowed us to assess various topics and details related to employees’ daily routine tasks, eating habits, and general health status. Furthermore, recommendations to improve general health care …

Develop Biochar-Based Controlled Release Nitrogen Fertilizers, Zhisheng Cen

Electronic Theses and Dissertations

The current efficiency of conventional nitrogenous fertilizers (e.g. urea, ammonium sulfate, etc.) in agricultural practices is low, fluctuating from 30 to 40%. Approximately 60% of nitrogenous fertilizers were wasted due to vaporization into the air, runoff or leaching into water systems. The lost nitrogen (N) resulted in not only high production cost but also serious environmental problems, such as greenhouse gas (N2O) emission in the atmosphere, algal blooms, oxygen depletion, fish kills, and loss of biodiversity in surface water due to eutrophication or pollution. To address these problems, this study aimed to utilize low-cost biochar-based materials to develop a controllable, …

Evaluation Of Biotype 4 Aphis Glycines (Hemiptera: Aphididae) Induced Susceptibility On Soybean And Soja, Jakob David Hicks

Electronic Theses and Dissertations

Soybean aphids have been a significant pest of soybeans in North America since 2000. Before 2000, soybeans did not face significant insect pest pressure from any arthropods with piercing-sucking mouthparts. It is estimated that economic damage from soybean aphids range from $1billion to $4.7 billion annually. Research efforts focused on the identification of host plant resistance genes in soybean and discovered many resistant to Aphis glycines genes (i.e., Rag genes) in soybean. However, the adoption of commercially released Rag soybean cultivars has been limited. The prospect of management with Rag genes was further complicated by the identification of three virulent …

Milk Phospholipids Extraction Using Switchable Solvents, Kaavya Rathnakumar

Electronic Theses and Dissertations

Phospholipids (PLs) found in milk are of great interest due to their health and nutritional benefits associated with their consumption. By-products generated during the manufacture of dairy products represent a source of PLs with potential for value-added opportunities. Currently, the extraction of PLs from by-products results in overall lowefficiencies, and it involves subsequent solvent separation and lipid recovery. This dissertation studied the extraction of milk PLs from by-product streams with a tertiary anime (N, N-dimethyl cyclohexylamine, CyNMe2) as a switchable hydrophilicity solvent. This type of solvents can be reversibly switched between a hydrophobic and hydrophilic form in the presence or …

A Biocontrol Pesticide Derived From Mycovirus-Infected Sclerotinia Sclerotiorum Can Induce Plant Resistance, Connor Pedersen

Electronic Theses and Dissertations

Soybean leaf-associated gemycircularvirus-1 (SlaGemV-1) is a novel mycovirus discovered through the metagenomic sequencing of soybean leaves which is capable of inducing hypovirulence in the highly pathogenic fungus Sclerotinia sclerotiorum. RNASeq analysis techniques were used to determine the transcriptional changes caused by the infection of virus in S. sclerotiorum, as well as the transcriptional changes in Glycine max caused by the colonization of hypovirulent, SlaGemV-1-infected S. sclerotiorum. RNASeq results indicate that viral infection leading to hypovirulence may attenuate expression of genes relating to cell wall synthesis, microtubule formation, and metabolism of steroids and natural antibiotics. Cytochrome P450-related genes, kinesin domain genes, …

Nitrate And Phosphate Removal From Denitrification Bioreactors Using Woodchips, Steel Chips And Agricultural Residue Media, Abdoul Aziz Kouanda

Electronic Theses and Dissertations

Nitrate and phosphate present in agricultural subsurface drainage water can impact surface water quality thus impacting the environment and human health by causing eutrophication and Methemoglobinemia in young infant. Biological denitrification and phosphate adsorption filters are treatments options that can help reduce nitrate and phosphate concentration from agricultural subsurface drainage before it can be discharged in surface water. The first objective of this dissertation was to determine the Michaelis-Menten kinetics model parameters for nitrate removal in bioreactors using the fresh, aged, and composted woodchips. The composted woodchips achieved a denitrification rate 2.4 times higher than the fresh woodchips which was …

The Effects Of Saline Soil On Microbiome And The Isolation Of Root-Associated Microbes To Relieve Salinity Stress, Duncan Jakubowski

Electronic Theses and Dissertations

Increasing levels of salinity in once-viable lands for crop production is a serious and growing problem in the Northern Great Plains. The objectives of this study were to determine the effects of saline soil on the microbial composition of plant roots and bulk soil, to measure metabolic changes in plant roots from saline soil, to determine the viability of root-associated microbes as inoculants to increase stress tolerance in plants, as well as determine the impact of saline soil on nitrogen cycling genes linked to greenhouse gas production. This study hypothesizes that high soil salinity levels have a significant impact on …

Material Analysis Of 3d Welded 5356 Aluminum Alloy, Ryan Fouts

Electronic Theses and Dissertations

Metal 3D printing has been reserved for aerospace and high-end automotive industries because of its cost. A gas metal arc welder (GMAW) on a rugged 3D printer frame could make metal additive manufacturing an option for more industries and consumers. 3D welded aluminum has not been examined in depth as an option for additive manufacturing (AM). Extensive tests are necessary to determine the correct settings to use a metal inert gas (MIG) welder for AM. Porosity within the welded material must be evaluated to better understand the additive process. The material properties of 3D welded aluminum will be tested and …

Analysis Of Volatile Organic Compounds: Petroleum Emissions And Microbial Degradation, A K M Ahsan Ahmed

Electronic Theses and Dissertations

Volatile organic compounds (VOCs) are abundant in nature and can occur in various forms in a wide variety of sources. Petroleum is one of the major sources of VOCs. Petroleum being the most widely used energy resources of the world, often released to the environment due to emission and leakage or accidental spillage during exploration, transportation and manufacturing. Once released to the environment, petroleum poses a serious threat to the environment due to some of its toxic organic components. Therefore, the analysis of petroleum is critical to understand its effect on the environment and remediation. This dissertation is focused on …